ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak4e22 |
|---|---|
| Clone Library Name | barley_pub |
>CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 324 Score = 289 bits (739), Expect(2) = 1e-79 Identities = 147/163 (90%), Positives = 147/163 (90%) Frame = +1 Query: 34 VAPRARSSTIAASLGTPAPSSSASFRPKLIRTTXXXXXXXXXXXXXXXXERLKTGFEKFK 213 VAPRARSSTIAASLGTPAPSSSASFRPKLIRTT ERLKTGFEKFK Sbjct: 79 VAPRARSSTIAASLGTPAPSSSASFRPKLIRTTPVQAAPVAPALMDAAVERLKTGFEKFK 138 Query: 214 TEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCK 393 TEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCK Sbjct: 139 TEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCK 198 Query: 394 NKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGA 522 NKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGA Sbjct: 199 NKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGA 241 Score = 27.3 bits (59), Expect(2) = 1e-79 Identities = 10/10 (100%), Positives = 10/10 (100%) Frame = +3 Query: 3 TAAANWCYAT 32 TAAANWCYAT Sbjct: 69 TAAANWCYAT 78
>CAHC_SPIOL (P16016) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 319 Score = 154 bits (390), Expect = 1e-37 Identities = 75/112 (66%), Positives = 87/112 (77%) Frame = +1 Query: 181 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 360 +R+K GF KFK E Y+K P + L GQAPK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 113 QRIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVR 172 Query: 361 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 516 NIANMVP + K+KYAGVG+AIEYAV LKVE IVVIGHS CGGIK L+S D Sbjct: 173 NIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPD 224
>CAHC_TOBAC (P27141) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 321 Score = 154 bits (388), Expect = 2e-37 Identities = 74/110 (67%), Positives = 86/110 (78%) Frame = +1 Query: 181 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 360 E +K GF FKTE Y+K P + L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 115 EHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVR 174 Query: 361 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSL 510 NIANMVPAY K +Y+GVG+AIEYAV LKVE IVVIGHS CGGIK L+SL Sbjct: 175 NIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSL 224
>CAHX_FLABR (P46511) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 149 bits (377), Expect = 3e-36 Identities = 69/112 (61%), Positives = 87/112 (77%) Frame = +1 Query: 181 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 360 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 124 ERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 183 Query: 361 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 516 N+ANMVP + K KY+GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D Sbjct: 184 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPD 235
>CAHX_FLABI (P46510) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 149 bits (377), Expect = 3e-36 Identities = 69/112 (61%), Positives = 87/112 (77%) Frame = +1 Query: 181 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 360 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 124 ERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 183 Query: 361 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 516 N+ANMVP + K KY+GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D Sbjct: 184 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPD 235
>CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase| 1) Length = 330 Score = 149 bits (377), Expect = 3e-36 Identities = 69/112 (61%), Positives = 87/112 (77%) Frame = +1 Query: 181 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 360 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 124 ERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 183 Query: 361 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 516 N+ANMVP + K KY+GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D Sbjct: 184 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPD 235
>CAHX_FLAPR (P46281) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 329 Score = 149 bits (376), Expect = 5e-36 Identities = 69/112 (61%), Positives = 87/112 (77%) Frame = +1 Query: 181 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 360 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 123 ERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 182 Query: 361 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 516 N+ANMVP + K KY+GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D Sbjct: 183 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPD 234
>CAH2_ARATH (P42737) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) Length = 259 Score = 146 bits (369), Expect = 3e-35 Identities = 81/154 (52%), Positives = 93/154 (60%) Frame = +1 Query: 46 ARSSTIAASLGTPAPSSSASFRPKLIRTTXXXXXXXXXXXXXXXXERLKTGFEKFKTEVY 225 A+ I A L + S S SF P ER+K GF FK E Y Sbjct: 29 AKVKKITAELQAASSSDSKSFDP---------------------VERIKEGFVTFKKEKY 67 Query: 226 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 405 + P + L GQ+PKYMVFAC+DSRVCPS L PG+AF +RNIANMVP + K KYA Sbjct: 68 ETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYA 127 Query: 406 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLS 507 GVG+AIEYAV LKVE IVVIGHS CGGIK L+S Sbjct: 128 GVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMS 161
>CAHC_PEA (P17067) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) [Contains: Carbonic anhydrase, 27 kDa isoform; Carbonic anhydrase, 25 kDa isoform] Length = 328 Score = 146 bits (368), Expect = 4e-35 Identities = 71/109 (65%), Positives = 82/109 (75%) Frame = +1 Query: 181 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 360 ER+KTGF FK E YDK P + L GQ+P +MVFAC+DSRVCPS L +PGEAF +R Sbjct: 122 ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVR 181 Query: 361 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLS 507 N+AN+VP Y + KYAG G+AIEYAV LKV IVVIGHS CGGIK LLS Sbjct: 182 NVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLS 230
>CAHC_ARATH (P27140) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 347 Score = 145 bits (365), Expect = 9e-35 Identities = 71/109 (65%), Positives = 82/109 (75%) Frame = +1 Query: 181 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 360 E +K GF KFK E Y+ P + L GQ+PKYMVFAC+DSRVCPS L +PG+AF +R Sbjct: 130 ETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVR 189 Query: 361 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLS 507 NIANMVP + K KY GVG+AIEYAV LKVE IVVIGHS CGGIK L+S Sbjct: 190 NIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMS 238
>CAH2_FLALI (P46513) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) (Fragment) Length = 190 Score = 124 bits (311), Expect = 2e-28 Identities = 60/94 (63%), Positives = 72/94 (76%) Frame = +1 Query: 235 PDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAGVG 414 P + L GQ+PK++VFAC+DSRVCPS L +PGEAF +RNIANMVP Y K++G G Sbjct: 2 PTLYGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAG 61 Query: 415 SAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 516 +AIEYAV LKVE IVVIGHS CGGIK L+S+ D Sbjct: 62 AAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPD 95
>CYNT_SYNY3 (Q54735) Carbonic anhydrase (EC 4.2.1.1)| Length = 274 Score = 92.0 bits (227), Expect = 9e-19 Identities = 46/110 (41%), Positives = 65/110 (59%) Frame = +1 Query: 181 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 360 +RL G +KF+ + D FE L GQ P+ + C+DSRV P++ E G+ F IR Sbjct: 2 QRLIEGLQKFREGYFSSHRDLFEQLSHGQHPRILFICCSDSRVDPNLITQSEVGDLFVIR 61 Query: 361 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSL 510 N N++P Y G G+A+EYA+ AL++ I+V GHS CG +K LL L Sbjct: 62 NAGNIIPPYGAAN-GGEGAAMEYALVALEINQIIVCGHSHCGAMKGLLKL 110
>CYNT_ECOLI (P0ABE9) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 92.0 bits (227), Expect = 9e-19 Identities = 44/104 (42%), Positives = 65/104 (62%) Frame = +1 Query: 196 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 375 GF KF+ E + K+ F+ L Q+P+ + +C+DSR+ P + EPG+ F IRN N+ Sbjct: 7 GFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNI 66 Query: 376 VPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLS 507 VP+Y GV +++EYAV AL+V IV+ GHS CG + A+ S Sbjct: 67 VPSYGPEP-GGVSASVEYAVAALRVSDIVICGHSNCGAMTAIAS 109
>CYNT_ECO57 (P0ABF0) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 92.0 bits (227), Expect = 9e-19 Identities = 44/104 (42%), Positives = 65/104 (62%) Frame = +1 Query: 196 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 375 GF KF+ E + K+ F+ L Q+P+ + +C+DSR+ P + EPG+ F IRN N+ Sbjct: 7 GFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNI 66 Query: 376 VPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLS 507 VP+Y GV +++EYAV AL+V IV+ GHS CG + A+ S Sbjct: 67 VPSYGPEP-GGVSASVEYAVAALRVSDIVICGHSNCGAMTAIAS 109
>CYNT_SYNP7 (P27134) Carbonic anhydrase (EC 4.2.1.1)| Length = 272 Score = 89.0 bits (219), Expect = 7e-18 Identities = 44/109 (40%), Positives = 61/109 (55%) Frame = +1 Query: 184 RLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRN 363 +L G F+T Y D FE GQ P+ + C+DSR+ P++ GE F IRN Sbjct: 3 KLIEGLRHFRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFVIRN 62 Query: 364 IANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSL 510 N++P + G G++IEYA+ AL +E +VV GHS CG +K LL L Sbjct: 63 AGNLIPPFGAAN-GGEGASIEYAIAALNIEHVVVCGHSHCGAMKGLLKL 110
>CAN_SHIFL (P61518) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 220 Score = 74.3 bits (181), Expect = 2e-13 Identities = 39/91 (42%), Positives = 54/91 (59%) Frame = +1 Query: 226 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 405 ++ P FFE L Q P+++ C+DSRV GLEPGE F RN+AN+V N Sbjct: 20 EEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCL- 78 Query: 406 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKA 498 S ++YAV L+VE I++ GH CGG++A Sbjct: 79 ---SVVQYAVDVLEVEHIIICGHYGCGGVQA 106
>CAN_ECOLI (P61517) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 220 Score = 74.3 bits (181), Expect = 2e-13 Identities = 39/91 (42%), Positives = 54/91 (59%) Frame = +1 Query: 226 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 405 ++ P FFE L Q P+++ C+DSRV GLEPGE F RN+AN+V N Sbjct: 20 EEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCL- 78 Query: 406 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKA 498 S ++YAV L+VE I++ GH CGG++A Sbjct: 79 ---SVVQYAVDVLEVEHIIICGHYGCGGVQA 106
>CYNT_HELPJ (Q9ZN54) Carbonic anhydrase (EC 4.2.1.1)| Length = 221 Score = 73.2 bits (178), Expect = 4e-13 Identities = 34/108 (31%), Positives = 62/108 (57%), Gaps = 1/108 (0%) Frame = +1 Query: 196 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 375 G +F+ Y++ + +E LK Q P + +C DSRV P++ G +PGE + IRN+ N+ Sbjct: 6 GALEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNV 65 Query: 376 VPAYCKNKYA-GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 516 +P K + +++EYA+ + V+ +++ GHS CG ++ + D Sbjct: 66 IPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGACGSIHLIHD 113
>CAN_HAEIN (P45148) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 229 Score = 71.6 bits (174), Expect = 1e-12 Identities = 39/97 (40%), Positives = 54/97 (55%) Frame = +1 Query: 226 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 405 ++ +F+ L Q P Y+ C+DSRV LEPGE F RN+AN V N Sbjct: 20 EENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGELFVHRNVANQVIHTDFNCL- 78 Query: 406 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 516 S ++YAV LK+E I++ GH+ CGGI A ++ KD Sbjct: 79 ---SVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKD 112
>CYNT_HELPY (O24855) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 221 Score = 67.8 bits (164), Expect = 2e-11 Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 1/108 (0%) Frame = +1 Query: 196 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 375 G +F+ Y++ + +E LK Q P + +C DSRV P++ G +PGE + I N+ N+ Sbjct: 6 GALEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNV 65 Query: 376 VPAYCKNKYA-GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 516 P K + ++IEYA+ + V+ +++ GHS CG ++ + D Sbjct: 66 NPPKTSYKESLSTIASIEYAIAHVGVQNLIICGHSDCGACGSVHLIHD 113
>NCE3_YEAST (P53615) Non-classical export protein 3| Length = 221 Score = 65.1 bits (157), Expect = 1e-10 Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 1/102 (0%) Frame = +1 Query: 205 KFKTEVYDKKPDFFEPLKA-GQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVP 381 K+ +++ + +P F A GQ+P + C+DSR + LG+ PGE FT +N+AN+ Sbjct: 27 KWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENC-LGVLPGEVFTWKNVANI-- 83 Query: 382 AYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLS 507 C ++ + + +E+A+ LKV +++ GH+ CGGIK L+ Sbjct: 84 --CHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLT 123
>GLMM_PSEAE (Q9HV50) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 445 Score = 33.1 bits (74), Expect = 0.48 Identities = 22/57 (38%), Positives = 28/57 (49%) Frame = -1 Query: 495 LDSTAAAVANHHDDLNLERADGVFDGRSNTGVLVLAVGRDHVGDVADGEGLTGLKAQ 325 LD AAV HH DL + FDG + ++V DH G V DG+ L L A+ Sbjct: 221 LDGLQAAVVEHHADLGI-----AFDGDGDRVMMV-----DHTGAVVDGDELLFLIAR 267
>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) Length = 925 Score = 30.8 bits (68), Expect = 2.4 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +2 Query: 317 RSPWALSPVRPSPSATSPTWSRPTARTSTPVLDRPS 424 +SP A SP SP A SPT PTA+ +PV P+ Sbjct: 628 KSPTAKSPEAKSPEAKSPTAKSPTAK--SPVAKSPT 661 Score = 30.0 bits (66), Expect = 4.0 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +2 Query: 317 RSPWALSPVRPSPSATSPTWSRPTARTSTP 406 +SP A SP SP+A SPT P A++ P Sbjct: 663 KSPEAKSPEAKSPTAKSPTAKSPAAKSPAP 692 Score = 29.6 bits (65), Expect = 5.3 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +2 Query: 317 RSPWALSPVRPSPSATSPTWSRPTART 397 +SP A SP SP A SPT PTA++ Sbjct: 658 KSPTAKSPEAKSPEAKSPTAKSPTAKS 684 Score = 29.6 bits (65), Expect = 5.3 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +2 Query: 299 TRVCARRSPWALSPVRPSPSATSPTWSRPTARTST 403 T+ +SP A SP SP+A SPT P A++ T Sbjct: 627 TKSPTAKSPEAKSPEAKSPTAKSPTAKSPVAKSPT 661 Score = 29.3 bits (64), Expect = 6.9 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +2 Query: 317 RSPWALSPVRPSPSATSPTWSRPTARTST 403 +SP A SP SP A SP PTA++ T Sbjct: 653 KSPVAKSPTAKSPEAKSPEAKSPTAKSPT 681 Score = 29.3 bits (64), Expect = 6.9 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +2 Query: 317 RSPWALSPVRPSPSATSPTWSRPTARTST 403 +SP A SPV SP+A SP P A++ T Sbjct: 648 KSPTAKSPVAKSPTAKSPEAKSPEAKSPT 676
>Y1315_MYCBO (P64798) Hypothetical protein Mb1315| Length = 163 Score = 30.0 bits (66), Expect = 4.0 Identities = 23/87 (26%), Positives = 37/87 (42%) Frame = +1 Query: 226 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 405 D F PL + + AC D+R+ LG++ GEA IRN +V Sbjct: 13 DYASGFKGPLPMPPSKHIAIVACMDARLDVYRMLGIKEGEAHVIRNAGCVVT-------D 65 Query: 406 GVGSAIEYAVCALKVEVIVVIGHSRCG 486 V ++ + L I+++ H+ CG Sbjct: 66 DVIRSLAISQRLLGTREIILLHHTDCG 92
>Y1284_MYCTU (P64797) Hypothetical protein Rv1284/MT1322| Length = 163 Score = 30.0 bits (66), Expect = 4.0 Identities = 23/87 (26%), Positives = 37/87 (42%) Frame = +1 Query: 226 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 405 D F PL + + AC D+R+ LG++ GEA IRN +V Sbjct: 13 DYASGFKGPLPMPPSKHIAIVACMDARLDVYRMLGIKEGEAHVIRNAGCVVT-------D 65 Query: 406 GVGSAIEYAVCALKVEVIVVIGHSRCG 486 V ++ + L I+++ H+ CG Sbjct: 66 DVIRSLAISQRLLGTREIILLHHTDCG 92
>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)| Length = 907 Score = 29.6 bits (65), Expect = 5.3 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 6/52 (11%) Frame = +2 Query: 293 APTRVCARRSPWALSPV----RPSPSATSPTWSR--PTARTSTPVLDRPSNT 430 +PT +P A SP P+P+ATSPT + PT+ +TP + S T Sbjct: 522 SPTPAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPT 573
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 26.6 bits (57), Expect(2) = 6.4 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +3 Query: 132 PRPGRARRTCIDGRRRGAPQDRVREVQDRGLRQEARFLRAAQGRPGAQVHGVRVRRLACV 311 P+PG G R GAP+ G + R + QGRPG Q G +R Sbjct: 164 PKPG--------GARPGAPKPGGARPSGPG---QDRGQQGGQGRPGGQRPGAPAQR---- 208 Query: 312 PVGHPG 329 P G PG Sbjct: 209 PGGRPG 214 Score = 21.2 bits (43), Expect(2) = 6.4 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +1 Query: 37 APRARSSTIAASLGTPAPSSSASFRP 114 AP+A ++ A+ PAP+ S RP Sbjct: 102 APKAPAAQQPAAPSAPAPAPSQGPRP 127
>YA28_SCHPO (Q09699) Hypothetical protein C2F7.08c in chromosome I| Length = 632 Score = 29.3 bits (64), Expect = 6.9 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = +3 Query: 192 DRVREVQDRGLRQEARFLRAAQGRPGAQVHGVRVRRLACVPVGH 323 D E QDRG +EAR +R QGR HG+ + L +P H Sbjct: 366 DAEMERQDRGYDREARRMRRRQGR---AKHGIMLPDLRDIPKIH 406
>IF2_COREF (Q8FPA7) Translation initiation factor IF-2| Length = 964 Score = 29.3 bits (64), Expect = 6.9 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = +2 Query: 293 APTRVCARRSPWALSPVRPSPSATSPTWSRPTA-RTSTPVLDRPS 424 AP A P P P P+A P ++PTA + +TP P+ Sbjct: 97 APKPGTAAAKPTPAKPAAPKPTAAKPAPAKPTAPKPATPAFSGPT 141
>ZO2_HUMAN (Q9UDY2) Tight junction protein ZO-2 (Zonula occludens 2 protein)| (Zona occludens 2 protein) (Tight junction protein 2) Length = 1190 Score = 29.3 bits (64), Expect = 6.9 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +2 Query: 296 PTRVCARRSPWALSPVRPSPSATSPTWSRPTARTSTPV 409 P+ V +P A + P P A PT+ R + STP+ Sbjct: 1019 PSAVAGNETPGASTKGYPPPVAAKPTFGRSILKPSTPI 1056
>IF2_BRUME (Q8YEB3) Translation initiation factor IF-2| Length = 959 Score = 29.3 bits (64), Expect = 6.9 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +3 Query: 153 RTCIDGRRRGAPQDRVREVQDRGLRQEARFLRAAQGRPGAQVHGVRVRRLA 305 R+ +D RRR + ++REV++R E RA + A+ H RR A Sbjct: 153 RSEMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEHEESARRQA 203
>Y414_ARCFU (O29833) Hypothetical protein AF0414| Length = 144 Score = 28.9 bits (63), Expect = 9.0 Identities = 18/87 (20%), Positives = 37/87 (42%) Frame = +1 Query: 229 KKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAG 408 KKPDF EP+K P+ V + S+TL + ++ + Y K+++ Sbjct: 15 KKPDFVEPVKPVDKPEIAVKKAPLRELAASITLSALSAKKLIDMELSKIRKEYEKDEFLR 74 Query: 409 VGSAIEYAVCALKVEVIVVIGHSRCGG 489 + + +++E+ + + GG Sbjct: 75 NFPLPGFEISEMELELNFAVDEVKDGG 101
>SGS3_DROME (P02840) Salivary glue protein Sgs-3 precursor| Length = 307 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/49 (28%), Positives = 21/49 (42%) Frame = +2 Query: 284 CSRAPTRVCARRSPWALSPVRPSPSATSPTWSRPTARTSTPVLDRPSNT 430 C+ T P P P+ T PT ++PT T+ P +P+ T Sbjct: 140 CTTPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPT--TTKPTTTKPTTT 186 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,116,737 Number of Sequences: 219361 Number of extensions: 1195796 Number of successful extensions: 5343 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 4732 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5288 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
