>YB03_SCHPO (P87145) Hypothetical protein C25H2.03 in chromosome II|
          Length = 811

 Score =  110 bits (274), Expect = 2e-24
 Identities = 60/148 (40%), Positives = 91/148 (61%), Gaps = 8/148 (5%)
 Frame = +3

Query: 3    ELAGLRSLLKKSLVDTWGKDLFLSLYSSWCHSPMATISLCLLAQAYNHASSVIQSLGEED 182
            EL  LR  LK+S      +++F +LY++WCH+ +A  SLCLL+Q Y HA++++    E +
Sbjct: 584  ELYDLRKKLKQSAPKL--QNIFTTLYTAWCHNSIAVFSLCLLSQNYEHAANLLSVFAEIE 641

Query: 183  INVKFLVQLDKLIRLLETPVFAYLRLQLLEPGKHTWXXXXXXXXXXXXPQQSAAFKILRT 362
             N+  L+QLDKL++L+E+PVF Y+RLQLLEP K+ +            P QS+AF+ LR 
Sbjct: 642  FNIDMLIQLDKLVQLIESPVFTYMRLQLLEPEKYPYLHKALYGILMLLP-QSSAFRTLRD 700

Query: 363  RLK--------TVPFSENLKRTSSANPY 422
            RL+        T+  +E L R+   +PY
Sbjct: 701  RLQCSSTPRTNTILANERLPRSRRDDPY 728

>VAC14_YEAST (Q06708) Vacuole morphology and inheritance protein 14 (Swollen|
           vacuole phenotype 2 protein)
          Length = 880

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 44/104 (42%), Positives = 63/104 (60%)
 Frame = +3

Query: 66  FLSLYSSWCHSPMATISLCLLAQAYNHASSVIQSLGEEDINVKFLVQLDKLIRLLETPVF 245
           F SL+ SWC +P++ ISLC +A+ Y  A +V+Q+    ++ +  LVQLD LI+L E+PVF
Sbjct: 645 FNSLFKSWCPNPVSVISLCFVAENYELAYTVLQTYANYELKLNDLVQLDILIQLFESPVF 704

Query: 246 AYLRLQLLEPGKHTWXXXXXXXXXXXXPQQSAAFKILRTRLKTV 377
             +RLQLLE  KH +            P QS AF+ L  RL ++
Sbjct: 705 TRMRLQLLEQQKHPFLHKCLFGILMIIP-QSKAFETLNRRLNSL 747

>IMB4_YEAST (P40069) Importin beta-4 subunit (Karyopherin beta-4 subunit)|
           (Ran-binding protein YRB4)
          Length = 1113

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
 Frame = +3

Query: 60  DLFLSLYSSWCHSPMATISLCLLAQAYNHASSVIQSLGEEDIN----VKFLVQLDKLIRL 227
           D FL+L+S   + P +     L AQA NH S++I+   +E IN     KF   +  ++ +
Sbjct: 161 DDFLALFSQTINDPSSLEIRSLSAQALNHVSALIEE--QETINPVQAQKFAASIPSVVNV 218

Query: 228 LETPVFA 248
           L+  + A
Sbjct: 219 LDAVIKA 225

>TNAP2_HUMAN (Q03169) Tumor necrosis factor, alpha-induced protein 2 (Primary|
           response gene B94 protein)
          Length = 654

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
 Frame = +3

Query: 3   ELAGLRSLLKKSL---VDTWGKDLFLSLYSSWCHSPMATISLCLLAQAYNHASSVIQSLG 173
           E A +R L+ ++L      W +D+        CHS +A   + + +QA   A S+   LG
Sbjct: 324 EAANVRELMDRALELEARRWAEDVPPQRLDGHCHSELAIDIIQITSQAQAKAESITLDLG 383

Query: 174 EEDINVKFLVQLDKLIR 224
            + I    LV+L   +R
Sbjct: 384 SQ-IKRVLLVELPAFLR 399

>GANA_ASPAC (P48842) Arabinogalactan endo-1,4-beta-galactosidase precursor (EC|
           3.2.1.89) (Endo-1,4-beta-galactanase) (Galactanase)
          Length = 350

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 17/64 (26%), Positives = 28/64 (43%)
 Frame = +3

Query: 9   AGLRSLLKKSLVDTWGKDLFLSLYSSWCHSPMATISLCLLAQAYNHASSVIQSLGEEDIN 188
           AG+   L   L DTW      +  S W  + + T+      Q YN+   V  +  E DI+
Sbjct: 88  AGMSLYLDLHLSDTWADPSDQTTPSGWSTTDLGTLKW----QLYNYTLEVCNTFAENDID 143

Query: 189 VKFL 200
           ++ +
Sbjct: 144 IEII 147

>HN_SENDH (P03425) Hemagglutinin-neuraminidase (EC 3.2.1.18) (HN protein)|
          Length = 576

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 20/73 (27%), Positives = 35/73 (47%)
 Frame = +3

Query: 30  KKSLVDTWGKDLFLSLYSSWCHSPMATISLCLLAQAYNHASSVIQSLGEEDINVKFLVQL 209
           + S VDTW   L +  ++ W  S +AT+ +C++  A    S+   S+  E +N+      
Sbjct: 29  RSSKVDTW---LLILSFTQWALS-IATVIICIIISARQGYSTKEYSMTVEALNMSSREVK 84

Query: 210 DKLIRLLETPVFA 248
           + L  L+   V A
Sbjct: 85  ESLTSLIRQEVIA 97

>ZWINT_MOUSE (Q9CQU5) ZW10 interactor (ZW10-interacting protein 1) (Zwint-1)|
          Length = 252

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +2

Query: 278 KTHLATENTLRSPDALASAKCSLQDLEDSTE 370
           +T LA E+T +SPDALAS   S Q   ++ E
Sbjct: 70  QTFLAQEDTEQSPDALASEDASRQKATETKE 100

>SYI_CORDI (Q6NGD7) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 1052

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = +3

Query: 12  GLRSLLKKSLVDTWGKDLFLSLYSS----WCHSPMATISLCLLAQAYNHASSVIQSLGEE 179
           G+R  ++++L+  W    FL LYSS    W       +   +LA+ ++  ++V  +L   
Sbjct: 671 GIREGVRQALLPMWNAYSFLQLYSSKPAQWSVDSSDVLDRYILAKLHDVVAAVGDALDNT 730

Query: 180 DI 185
           DI
Sbjct: 731 DI 732

>NOX3_MOUSE (Q672J9) NADPH oxidase 3 (EC 1.6.3.-)|
          Length = 568

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +1

Query: 22  LFLKSHWWILGGRTYFYLYTLLGATLQWLQSACAYLLRHTIMRALL 159
           LF+ + +W      +FY   +LG+ L W + A A  L    M  LL
Sbjct: 26  LFIDTFFWYTEEEAFFYTRVILGSALAWAR-ASAVCLNFNCMLILL 70

>DPOL_HBVW9 (P17100) P protein [Includes: DNA-directed DNA polymerase (EC|
           2.7.7.7); RNA-directed DNA polymerase (EC 2.7.7.49);
           Ribonuclease H (EC 3.1.26.4)]
          Length = 845

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = +2

Query: 167 SGRRRHKCEVSGAVG*IDPSIRDSSICLPAFTAS*AWKTHLATENTLRSPDALASAKC 340
           S RR    E SG+ G +DPS+ +SS CL       A  +HL+T     S        C
Sbjct: 252 STRRCFGVEPSGS-GHVDPSVNNSSSCLRQSAVRKAAYSHLSTSKRQSSSGHAVEFHC 308

>LNT_SYNEL (Q8DIC3) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP|
           N-acyltransferase)
          Length = 506

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +3

Query: 51  WGKDLFLSLYSSWCHSPMATISLCL 125
           WG  L+ +L + W HSP+  ISL L
Sbjct: 139 WGVTLWCALEALWSHSPLWWISLSL 163


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,686,648
Number of Sequences: 219361
Number of extensions: 1209419
Number of successful extensions: 3383
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3383
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)