ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4e07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478772.1| Oryza sativa (japonica cultivar-group), mRNA 347 2e-92
2dbj|AK065242.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 3e-85
3gb|AY108240.1| Zea mays PCO100302 mRNA sequence 285 6e-74
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 133 5e-28
5dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D... 133 5e-28
6emb|AJ133751.1|SOL133751 Spinacia oleracea mRNA for chloroplast ... 64 4e-07
7emb|X72384.1|DCD2NLP D.carota D2 mRNA for glycine rich protein 58 2e-05
8emb|CR450763.5| Zebrafish DNA sequence from clone CH211-180M24, ... 44 0.36
9gb|AY112589.1| Zea mays CL61174_1 mRNA sequence 44 0.36
10ref|NM_116184.2| Arabidopsis thaliana unknown protein AT3G63190 ... 42 1.4
11gb|AC122253.5| Mus musculus BAC clone RP23-171K3 from chromosome... 42 1.4
12gb|AY092982.1| Arabidopsis thaliana putative protein (At3g63190)... 42 1.4
13gb|AY056778.1| Arabidopsis thaliana AT3g63190/F16M2_40 mRNA, com... 42 1.4
14gb|AC159229.2| Mus musculus BAC clone RP24-351I2 from chromosome... 42 1.4
15gb|AF372883.1|AF372883 Arabidopsis thaliana AT3g63190/F16M2_40 m... 42 1.4
16emb|BX822699.1|CNS0A72X Arabidopsis thaliana Full-length cDNA Co... 42 1.4
17emb|BX825146.1|CNS0A6FZ Arabidopsis thaliana Full-length cDNA Co... 42 1.4
18gb|BT002678.1| Arabidopsis thaliana At3g63190/F16M2_40 gene, com... 42 1.4
19gb|AC140361.2| Mus musculus BAC clone RP24-247B3 from chromosome... 42 1.4
20gb|AC131036.4| Mus musculus chromosome 5, clone RP23-358D12, com... 40 5.6
21ref|XM_956989.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.6
22ref|XM_328654.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.6
23gb|AC111010.5| Mus musculus BAC clone RP23-419L21 from chromosom... 40 5.6
24gb|AC166290.7| Mus musculus BAC RP23-14P17 (Roswell Park Cancer... 40 5.6
25gb|AC163275.4| Mus musculus chromosome 5, clone RP23-458G12, com... 40 5.6
26ref|XM_742778.1| Aspergillus fumigatus Af293 tRNA-splicing endon... 40 5.6
27ref|XM_539204.2| PREDICTED: Canis familiaris similar to plectin ... 40 5.6
28ref|XM_852242.1| PREDICTED: Canis familiaris similar to plectin ... 40 5.6
29ref|XM_852201.1| PREDICTED: Canis familiaris similar to plectin ... 40 5.6
30ref|XM_852160.1| PREDICTED: Canis familiaris similar to plectin ... 40 5.6
31ref|XM_852120.1| PREDICTED: Canis familiaris similar to plectin ... 40 5.6
32ref|XM_852074.1| PREDICTED: Canis familiaris similar to plectin ... 40 5.6
33ref|XM_843706.1| PREDICTED: Canis familiaris similar to plectin ... 40 5.6
34gb|AC121590.2| Mus musculus BAC clone RP23-281L22 from 2, comple... 40 5.6
35gb|AC110540.7| Mus musculus chromosome 3, clone RP23-105B8, comp... 40 5.6
36gb|AC154993.9| Mus musculus chromosome 3, clone RP23-246L14, com... 40 5.6
37emb|AL844892.5| Human DNA sequence from clone RP11-396M20 on chr... 40 5.6
38emb|AL607062.10| Human DNA sequence from clone RP11-439F7 on chr... 40 5.6
39gb|AF306784.1| Cherax quadricarinatus vitellogenin (vg) mRNA, co... 40 5.6
40gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 5.6
41emb|BX571658.1| Wolinella succinogenes, complete genome; segment... 40 5.6
42emb|AL596086.9| Mouse DNA sequence from clone RP23-168C20 on chr... 40 5.6
43emb|BX323864.8| Zebrafish DNA sequence from clone CH211-218K4 in... 40 5.6
44emb|BX511254.6| Zebrafish DNA sequence from clone DKEYP-90G2 in ... 40 5.6
45gb|AC010863.10| Homo sapiens chromosome 10 clone RP11-346E7, com... 40 5.6
46gb|AC007518.32| Mus musculus chromosome , clone CT7-345D4, compl... 40 5.6
47gb|AC106799.3| Homo sapiens chromosome 5 clone RP11-445O3, compl... 40 5.6
48dbj|AK138983.1| Mus musculus adult male aorta and vein cDNA, RIK... 40 5.6
49gb|AC026711.6| Homo sapiens chromosome 5 clone CTD-2093E18, comp... 40 5.6
50ref|XM_626980.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 5.6
51gb|AC153884.1| Mus musculus 6 BAC RP23-476E22 (Roswell Park Can... 40 5.6
52dbj|BS000019.1| Pan troglodytes chromosome 22 clone:PTB-023I17, ... 40 5.6
53gb|AC145738.4| Mus musculus BAC clone RP24-293H7 from 3, complet... 40 5.6
54gb|AC147968.2| Gallus gallus BAC clone CH261-119F24 from chromos... 40 5.6
55emb|AL928700.7| Mouse DNA sequence from clone RP23-388J20 on chr... 40 5.6
56emb|AL928543.5| Mouse DNA sequence from clone RP23-345P1 on chro... 40 5.6
57emb|AL845165.4| Mouse DNA sequence from clone RP23-281N9 on chro... 40 5.6 
>ref|XM_478772.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1227

 Score =  347 bits (175), Expect = 2e-92
 Identities = 277/311 (89%)
 Strand = Plus / Plus

                                                                       
Query: 2   attgagaaagctatagttgctgcaaatattggggtaacaccaagcaatgatggagaagtg 61
           ||||||||| | ||||||||||||||| | ||||| ||||||||||||||||||||||||
Sbjct: 572 attgagaaaacaatagttgctgcaaatctgggggttacaccaagcaatgatggagaagtg 631

                                                                       
Query: 62  atacgagtcactgtcccaccattgacatctgatcgcagaaaggagatgacaaaaaccgta 121
           || ||||||||||| ||||||||||| ||||| |||||||||||  || ||||||| || 
Sbjct: 632 attcgagtcactgttccaccattgacttctgaccgcagaaaggaattggcaaaaactgtt 691

                                                                       
Query: 122 gctaagttatctgaagaaggcaaggttgctatcagaaacataagacgagacgcaatcaaa 181
           ||||| ||| |||||||||||||||||||||| || ||||||||| |||| || ||||||
Sbjct: 692 gctaaattagctgaagaaggcaaggttgctataaggaacataagaagagatgccatcaaa 751

                                                                       
Query: 182 gcctatgataagctagagaaggaaaagaaactttctgaagataatgtgaaggatttatca 241
           || || |||||||| ||||||||||||||||||||||||||||| ||||||||||| || 
Sbjct: 752 gcttacgataagcttgagaaggaaaagaaactttctgaagataacgtgaaggatttgtcc 811

                                                                       
Query: 242 gccgatctacaaaaaatcacagacgagtacatgaaaaaggttgaagccatccaaaagcag 301
           || |||||||||||| | || |||||||||||||||||| | ||||| ||||||||||||
Sbjct: 812 gctgatctacaaaaagttactgacgagtacatgaaaaagatcgaagctatccaaaagcag 871

                      
Query: 302 aaggaacagga 312
           |||||||||||
Sbjct: 872 aaggaacagga 882
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>dbj|AK065242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I12, full
           insert sequence
          Length = 1226

 Score =  323 bits (163), Expect = 3e-85
 Identities = 275/311 (88%), Gaps = 1/311 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   attgagaaagctatagttgctgcaaatattggggtaacaccaagcaatgatggagaagtg 61
           ||||||||| | ||||||||||||||| | ||||| ||||||||||||||||||||||||
Sbjct: 572 attgagaaaacaatagttgctgcaaatctgggggttacaccaagcaatgatggagaagtg 631

                                                                       
Query: 62  atacgagtcactgtcccaccattgacatctgatcgcagaaaggagatgacaaaaaccgta 121
           || ||||||||||| ||||||||||| ||||| |||||||||||  || ||||||| || 
Sbjct: 632 attcgagtcactgttccaccattgacttctgaccgcagaaaggaattggcaaaaactgtt 691

                                                                       
Query: 122 gctaagttatctgaagaaggcaaggttgctatcagaaacataagacgagacgcaatcaaa 181
           ||||| ||| |||||||||||||||||||||| || ||||||||| |||| || |||| |
Sbjct: 692 gctaaattagctgaagaaggcaaggttgctataaggaacataagaagagatgccatcata 751

                                                                       
Query: 182 gcctatgataagctagagaaggaaaagaaactttctgaagataatgtgaaggatttatca 241
           || || |||||||| ||||||||||||||||||||||||||||| ||||||||||| || 
Sbjct: 752 gcttacgataagcttgagaaggaaaagaaactttctgaagataacgtgaaggatttgtcc 811

                                                                       
Query: 242 gccgatctacaaaaaatcacagacgagtacatgaaaaaggttgaagccatccaaaagcag 301
           || ||||||| |||| | || |||||||||||||||||| | ||||| ||||||||||||
Sbjct: 812 gctgatctac-aaaagttactgacgagtacatgaaaaagatcgaagctatccaaaagcag 870

                      
Query: 302 aaggaacagga 312
           |||||||||||
Sbjct: 871 aaggaacagga 881
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>gb|AY108240.1| Zea mays PCO100302 mRNA sequence
          Length = 776

 Score =  285 bits (144), Expect = 6e-74
 Identities = 243/276 (88%)
 Strand = Plus / Plus

                                                                       
Query: 5   gagaaagctatagttgctgcaaatattggggtaacaccaagcaatgatggagaagtgata 64
           |||||| |||||||||| |||||| |||| || |||||||||||||| ||||||||||||
Sbjct: 500 gagaaaactatagttgccgcaaatcttggtgtgacaccaagcaatgacggagaagtgata 559

                                                                       
Query: 65  cgagtcactgtcccaccattgacatctgatcgcagaaaggagatgacaaaaaccgtagct 124
           ||||| |||||||||||||||||||||||||||||||||||  |  |||| || ||||||
Sbjct: 560 cgagtgactgtcccaccattgacatctgatcgcagaaaggaattagcaaagacagtagct 619

                                                                       
Query: 125 aagttatctgaagaaggcaaggttgctatcagaaacataagacgagacgcaatcaaagcc 184
           || ||  ||||||| |||||||||||||| || ||||||||| |||| ||||||||||| 
Sbjct: 620 aaattggctgaagatggcaaggttgctataaggaacataagaagagatgcaatcaaagct 679

                                                                       
Query: 185 tatgataagctagagaaggaaaagaaactttctgaagataatgtgaaggatttatcagcc 244
           || ||||| ||| ||||||||||||| ||||||||||| |||||||| ||||| ||||| 
Sbjct: 680 tacgataaactacagaaggaaaagaagctttctgaagacaatgtgaaagatttgtcagct 739

                                               
Query: 245 gatctacaaaaaatcacagacgagtacatgaaaaag 280
           || ||||||||| |||| ||||||||||||||||||
Sbjct: 740 gacctacaaaaagtcacggacgagtacatgaaaaag 775
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  133 bits (67), Expect = 5e-28
 Identities = 94/103 (91%)
 Strand = Plus / Plus

                                                                            
Query: 2        attgagaaagctatagttgctgcaaatattggggtaacaccaagcaatgatggagaagtg 61
                ||||||||| | ||||||||||||||| | ||||| ||||||||||||||||||||||||
Sbjct: 22951988 attgagaaaacaatagttgctgcaaatctgggggttacaccaagcaatgatggagaagtg 22952047

                                                           
Query: 62       atacgagtcactgtcccaccattgacatctgatcgcagaaagg 104
                || ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 22952048 attcgagtcactgttccaccattgacttctgaccgcagaaagg 22952090



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                                 
Query: 263      gacgagtacatgaaaaaggttgaagccatccaaaagcagaaggaacagg 311
                |||||||||||||||||| | ||||| ||||||||||||||||||||||
Sbjct: 22954293 gacgagtacatgaaaaagatcgaagctatccaaaagcagaaggaacagg 22954341



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                     
Query: 201      aggaaaagaaactttctgaagataatgtgaaggatttatcagccgatctacaa 253
                ||||||||||||||||||||||||| ||||||||||| || || |||||||||
Sbjct: 22954114 aggaaaagaaactttctgaagataacgtgaaggatttgtccgctgatctacaa 22954166



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 111      caaaaaccgtagctaagttatctgaagaaggcaaggt 147
                ||||||| || ||||| ||| ||||||||||||||||
Sbjct: 22952906 caaaaactgttgctaaattagctgaagaaggcaaggt 22952942
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>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1121_A05
          Length = 172668

 Score =  133 bits (67), Expect = 5e-28
 Identities = 94/103 (91%)
 Strand = Plus / Plus

                                                                         
Query: 2     attgagaaagctatagttgctgcaaatattggggtaacaccaagcaatgatggagaagtg 61
             ||||||||| | ||||||||||||||| | ||||| ||||||||||||||||||||||||
Sbjct: 27202 attgagaaaacaatagttgctgcaaatctgggggttacaccaagcaatgatggagaagtg 27261

                                                        
Query: 62    atacgagtcactgtcccaccattgacatctgatcgcagaaagg 104
             || ||||||||||| ||||||||||| ||||| ||||||||||
Sbjct: 27262 attcgagtcactgttccaccattgacttctgaccgcagaaagg 27304



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                              
Query: 263   gacgagtacatgaaaaaggttgaagccatccaaaagcagaaggaacagg 311
             |||||||||||||||||| | ||||| ||||||||||||||||||||||
Sbjct: 29507 gacgagtacatgaaaaagatcgaagctatccaaaagcagaaggaacagg 29555



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                  
Query: 201   aggaaaagaaactttctgaagataatgtgaaggatttatcagccgatctacaa 253
             ||||||||||||||||||||||||| ||||||||||| || || |||||||||
Sbjct: 29328 aggaaaagaaactttctgaagataacgtgaaggatttgtccgctgatctacaa 29380



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 111   caaaaaccgtagctaagttatctgaagaaggcaaggt 147
             ||||||| || ||||| ||| ||||||||||||||||
Sbjct: 28120 caaaaactgttgctaaattagctgaagaaggcaaggt 28156
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>emb|AJ133751.1|SOL133751 Spinacia oleracea mRNA for chloroplast ribosome recycling factor
          Length = 1109

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 143/180 (79%)
 Strand = Plus / Plus

                                                                       
Query: 134 gaagaaggcaaggttgctatcagaaacataagacgagacgcaatcaaagcctatgataag 193
           |||||||| ||||||||  | || ||||||||| |||| ||  | ||| | ||||| || 
Sbjct: 648 gaagaaggaaaggttgcagtgaggaacataagaagagatgctctgaaatcttatgaaaaa 707

                                                                       
Query: 194 ctagagaaggaaaagaaactttctgaagataatgtgaaggatttatcagccgatctacaa 253
           || ||||||||||| || ||||| |||||||||||||| ||  |||| || ||||| || 
Sbjct: 708 cttgagaaggaaaaaaagctttcggaagataatgtgaaagacctatcggctgatctgcag 767

                                                                       
Query: 254 aaaatcacagacgagtacatgaaaaaggttgaagccatccaaaagcagaaggaacaggag 313
           ||  | || || ||||||||||| ||||||||  | ||| | |||||||| |||||||||
Sbjct: 768 aagttgaccgatgagtacatgaagaaggttgagtctatctacaagcagaaagaacaggag 827
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>emb|X72384.1|DCD2NLP D.carota D2 mRNA for glycine rich protein
          Length = 946

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                       
Query: 161 ataagacgagacgcaatcaaagcctatgataagctagagaaggaaaagaaactttctgaa 220
           |||||| |||| || || ||| |||||||||| || || |||||||| || || || |||
Sbjct: 520 ataagaagagatgccattaaatcctatgataaacttgaaaaggaaaaaaagctctcagaa 579

                                
Query: 221 gataatgtgaaggatttatca 241
           |||||||||||||| ||||||
Sbjct: 580 gataatgtgaaggacttatca 600
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>emb|CR450763.5| Zebrafish DNA sequence from clone CH211-180M24, complete sequence
          Length = 97685

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 277   aaaggttgaagccatccaaaag 298
             ||||||||||||||||||||||
Sbjct: 13607 aaaggttgaagccatccaaaag 13586
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>gb|AY112589.1| Zea mays CL61174_1 mRNA sequence
          Length = 414

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 288 ccatccaaaagcagaaggaacaggagctga 317
           ||||||| ||||||||||||||||| ||||
Sbjct: 403 ccatccagaagcagaaggaacaggaactga 374
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>ref|NM_116184.2| Arabidopsis thaliana unknown protein AT3G63190 mRNA, complete cds
          Length = 1235

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 185 tatgataagctagagaaggaaaagaaactttctgaagataatgtgaaggattt 237
           |||||||| || |||||||| ||||| || || ||||| || |||||||||||
Sbjct: 814 tatgataaactcgagaaggagaagaagctgtcagaagacaacgtgaaggattt 866
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>gb|AC122253.5| Mus musculus BAC clone RP23-171K3 from chromosome 17, complete sequence
          Length = 197161

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 298    gcagaaggaacaggagctgag 318
              |||||||||||||||||||||
Sbjct: 191358 gcagaaggaacaggagctgag 191378
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>gb|AY092982.1| Arabidopsis thaliana putative protein (At3g63190) mRNA, complete
           cds
          Length = 1173

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 185 tatgataagctagagaaggaaaagaaactttctgaagataatgtgaaggattt 237
           |||||||| || |||||||| ||||| || || ||||| || |||||||||||
Sbjct: 752 tatgataaactcgagaaggagaagaagctgtcagaagacaacgtgaaggattt 804
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>gb|AY056778.1| Arabidopsis thaliana AT3g63190/F16M2_40 mRNA, complete cds
          Length = 1212

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 185 tatgataagctagagaaggaaaagaaactttctgaagataatgtgaaggattt 237
           |||||||| || |||||||| ||||| || || ||||| || |||||||||||
Sbjct: 814 tatgataaactcgagaaggagaagaagctgtcagaagacaacgtgaaggattt 866
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>gb|AC159229.2| Mus musculus BAC clone RP24-351I2 from chromosome 12, complete sequence
          Length = 134517

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 351   aactggccacaagatttctga 371
             |||||||||||||||||||||
Sbjct: 58133 aactggccacaagatttctga 58113
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>gb|AF372883.1|AF372883 Arabidopsis thaliana AT3g63190/F16M2_40 mRNA, complete cds
          Length = 1050

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 185 tatgataagctagagaaggaaaagaaactttctgaagataatgtgaaggattt 237
           |||||||| || |||||||| ||||| || || ||||| || |||||||||||
Sbjct: 734 tatgataaactcgagaaggagaagaagctgtcagaagacaacgtgaaggattt 786
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>emb|BX822699.1|CNS0A72X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB59ZB01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1225

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 185 tatgataagctagagaaggaaaagaaactttctgaagataatgtgaaggattt 237
           |||||||| || |||||||| ||||| || || ||||| || |||||||||||
Sbjct: 864 tatgataaactcgagaaggagaagaagctgtcagaagacaacgtgaaggattt 916
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>emb|BX825146.1|CNS0A6FZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL15ZF09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1062

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 185 tatgataagctagagaaggaaaagaaactttctgaagataatgtgaaggattt 237
           |||||||| || |||||||| ||||| || || ||||| || |||||||||||
Sbjct: 750 tatgataaactcgagaaggagaagaagctgtcagaagacaacgtgaaggattt 802
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>gb|BT002678.1| Arabidopsis thaliana At3g63190/F16M2_40 gene, complete cds
          Length = 828

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 185 tatgataagctagagaaggaaaagaaactttctgaagataatgtgaaggattt 237
           |||||||| || |||||||| ||||| || || ||||| || |||||||||||
Sbjct: 685 tatgataaactcgagaaggagaagaagctgtcagaagacaacgtgaaggattt 737
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>gb|AC140361.2| Mus musculus BAC clone RP24-247B3 from chromosome 17, complete sequence
          Length = 157937

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 298    gcagaaggaacaggagctgag 318
              |||||||||||||||||||||
Sbjct: 115718 gcagaaggaacaggagctgag 115698
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>gb|AC131036.4| Mus musculus chromosome 5, clone RP23-358D12, complete sequence
          Length = 197112

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 285   aagccatccaaaagcagaaggaac 308
             |||||||||||||||||| |||||
Sbjct: 59793 aagccatccaaaagcagagggaac 59770
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>ref|XM_956989.1| Neurospora crassa OR74A hypothetical protein (NCU07949.1) partial
            mRNA
          Length = 8481

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  aagctagagaaggaaaagaa 210
            ||||||||||||||||||||
Sbjct: 3736 aagctagagaaggaaaagaa 3755
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>ref|XM_328654.1| Neurospora crassa OR74A hypothetical protein (NCU07949.1) partial
            mRNA
          Length = 8481

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  aagctagagaaggaaaagaa 210
            ||||||||||||||||||||
Sbjct: 3736 aagctagagaaggaaaagaa 3755
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>gb|AC111010.5| Mus musculus BAC clone RP23-419L21 from chromosome 14, complete
             sequence
          Length = 205141

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   aagctagagaaggaaaagaa 210
             ||||||||||||||||||||
Sbjct: 23524 aagctagagaaggaaaagaa 23505
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>gb|AC166290.7| Mus musculus  BAC RP23-14P17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 242055

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    tgatcgcagaaaggagatga 110
             ||||||||||||||||||||
Sbjct: 96126 tgatcgcagaaaggagatga 96145
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>gb|AC163275.4| Mus musculus chromosome 5, clone RP23-458G12, complete sequence
          Length = 176643

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 285    aagccatccaaaagcagaaggaac 308
              |||||||||||||||||| |||||
Sbjct: 104767 aagccatccaaaagcagagggaac 104744
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>ref|XM_742778.1| Aspergillus fumigatus Af293 tRNA-splicing endonuclease (Afu6g02060)
            partial mRNA
          Length = 6231

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 170  gacgcaatcaaagcctatga 189
            ||||||||||||||||||||
Sbjct: 3124 gacgcaatcaaagcctatga 3143
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>ref|XM_539204.2| PREDICTED: Canis familiaris similar to plectin 1 isoform 1,
            transcript variant 1 (LOC482083), mRNA
          Length = 15160

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  agcagaaggaacaggagctg 316
            ||||||||||||||||||||
Sbjct: 6593 agcagaaggaacaggagctg 6612
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>ref|XM_852242.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1,
            transcript variant 8 (LOC482083), mRNA
          Length = 14734

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  agcagaaggaacaggagctg 316
            ||||||||||||||||||||
Sbjct: 6167 agcagaaggaacaggagctg 6186
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>ref|XM_852201.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1,
            transcript variant 7 (LOC482083), mRNA
          Length = 14734

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  agcagaaggaacaggagctg 316
            ||||||||||||||||||||
Sbjct: 6167 agcagaaggaacaggagctg 6186
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>ref|XM_852160.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1,
            transcript variant 6 (LOC482083), mRNA
          Length = 15175

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  agcagaaggaacaggagctg 316
            ||||||||||||||||||||
Sbjct: 6608 agcagaaggaacaggagctg 6627
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>ref|XM_852120.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1,
            transcript variant 5 (LOC482083), mRNA
          Length = 14749

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  agcagaaggaacaggagctg 316
            ||||||||||||||||||||
Sbjct: 6182 agcagaaggaacaggagctg 6201
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>ref|XM_852074.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1,
            transcript variant 4 (LOC482083), mRNA
          Length = 14863

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  agcagaaggaacaggagctg 316
            ||||||||||||||||||||
Sbjct: 6296 agcagaaggaacaggagctg 6315
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>ref|XM_843706.1| PREDICTED: Canis familiaris similar to plectin 1 isoform 1,
            transcript variant 2 (LOC482083), mRNA
          Length = 14812

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 297  agcagaaggaacaggagctg 316
            ||||||||||||||||||||
Sbjct: 6245 agcagaaggaacaggagctg 6264
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>gb|AC121590.2| Mus musculus BAC clone RP23-281L22 from 2, complete sequence
          Length = 167364

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   gagacgcaatcaaagcctat 187
             ||||||||||||||||||||
Sbjct: 78566 gagacgcaatcaaagcctat 78585
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>gb|AC110540.7| Mus musculus chromosome 3, clone RP23-105B8, complete sequence
          Length = 232416

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   agaaggaaaagaaactttct 217
             ||||||||||||||||||||
Sbjct: 57606 agaaggaaaagaaactttct 57587
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>gb|AC154993.9| Mus musculus chromosome 3, clone RP23-246L14, complete sequence
          Length = 208416

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 198    agaaggaaaagaaactttct 217
              ||||||||||||||||||||
Sbjct: 203890 agaaggaaaagaaactttct 203871
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>emb|AL844892.5| Human DNA sequence from clone RP11-396M20 on chromosome 10 Contains the
             5' end of the GRID1 gene for glutamate receptor
             (ionotropic) delta 1, the 3' end of the gene for  friend
             of EBNA2 (FOE) (KIAA0261) and five CpG islands, complete
             sequence
          Length = 167780

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   aggaacaggagctgagcaag 322
             ||||||||||||||||||||
Sbjct: 64055 aggaacaggagctgagcaag 64036
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>emb|AL607062.10| Human DNA sequence from clone RP11-439F7 on chromosome 10 Contains a
             novel gene (LOC221035), complete sequence
          Length = 88210

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    cagaaaggagatgacaaaaa 116
             ||||||||||||||||||||
Sbjct: 68014 cagaaaggagatgacaaaaa 68033
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>gb|AF306784.1| Cherax quadricarinatus vitellogenin (vg) mRNA, complete cds
          Length = 7944

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 214  ttctgaagataatgtgaagg 233
            ||||||||||||||||||||
Sbjct: 3861 ttctgaagataatgtgaagg 3880
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 289     catccaaaagcagaaggaac 308
               ||||||||||||||||||||
Sbjct: 2037145 catccaaaagcagaaggaac 2037164
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>emb|BX571658.1| Wolinella succinogenes, complete genome; segment 2/7
          Length = 346792

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    caatgatggagaagtgatac 65
             ||||||||||||||||||||
Sbjct: 85166 caatgatggagaagtgatac 85185
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>emb|AL596086.9| Mouse DNA sequence from clone RP23-168C20 on chromosome 11 Contains the
              3' end of the Tex14 gene for testis expressed gene 14,
              complete sequence
          Length = 200501

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 293    caaaagcagaaggaacaggagctg 316
              |||||||||||| |||||||||||
Sbjct: 186154 caaaagcagaagaaacaggagctg 186131
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>emb|BX323864.8| Zebrafish DNA sequence from clone CH211-218K4 in linkage group 17,
              complete sequence
          Length = 154824

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     atcgcagaaaggagatgaca 112
              ||||||||||||||||||||
Sbjct: 148331 atcgcagaaaggagatgaca 148312
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>emb|BX511254.6| Zebrafish DNA sequence from clone DKEYP-90G2 in linkage group 17,
              complete sequence
          Length = 185139

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     atcgcagaaaggagatgaca 112
              ||||||||||||||||||||
Sbjct: 138843 atcgcagaaaggagatgaca 138824
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>gb|AC010863.10| Homo sapiens chromosome 10 clone RP11-346E7, complete sequence
          Length = 186902

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    cagaaaggagatgacaaaaa 116
             ||||||||||||||||||||
Sbjct: 64820 cagaaaggagatgacaaaaa 64839
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>gb|AC007518.32| Mus musculus chromosome , clone CT7-345D4, complete sequence
          Length = 193714

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     tgatcgcagaaaggagatga 110
              ||||||||||||||||||||
Sbjct: 175452 tgatcgcagaaaggagatga 175471
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>gb|AC106799.3| Homo sapiens chromosome 5 clone RP11-445O3, complete sequence
          Length = 176095

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    atccaaaagcagaaggaaca 309
              ||||||||||||||||||||
Sbjct: 145291 atccaaaagcagaaggaaca 145310
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>dbj|AK138983.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
            enriched library, clone:A530045A01 product:hypothetical
            protein, full insert sequence
          Length = 2593

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 285  aagccatccaaaagcagaaggaac 308
            |||||||||||||||||| |||||
Sbjct: 1264 aagccatccaaaagcagagggaac 1241
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>gb|AC026711.6| Homo sapiens chromosome 5 clone CTD-2093E18, complete sequence
          Length = 191309

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   atccaaaagcagaaggaaca 309
             ||||||||||||||||||||
Sbjct: 14075 atccaaaagcagaaggaaca 14094
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>ref|XM_626980.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_700),
            partial mRNA
          Length = 5739

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 293  caaaagcagaaggaacagga 312
            ||||||||||||||||||||
Sbjct: 4154 caaaagcagaaggaacagga 4173
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>gb|AC153884.1| Mus musculus  6 BAC RP23-476E22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 195597

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    tcagaaacataagacgagac 172
              ||||||||||||||||||||
Sbjct: 133756 tcagaaacataagacgagac 133775
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>dbj|BS000019.1| Pan troglodytes chromosome 22 clone:PTB-023I17, map 22, complete
             sequences
          Length = 141751

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   gagaaggaaaagaaactttc 216
             ||||||||||||||||||||
Sbjct: 77064 gagaaggaaaagaaactttc 77045
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>gb|AC145738.4| Mus musculus BAC clone RP24-293H7 from 3, complete sequence
          Length = 135567

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    ttggggtaacaccaagcaat 49
             ||||||||||||||||||||
Sbjct: 22740 ttggggtaacaccaagcaat 22759
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>gb|AC147968.2| Gallus gallus BAC clone CH261-119F24 from chromosome unknown, complete
              sequence
          Length = 209917

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    ttatctgaagaaggcaaggt 147
              ||||||||||||||||||||
Sbjct: 165432 ttatctgaagaaggcaaggt 165413
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>emb|AL928700.7| Mouse DNA sequence from clone RP23-388J20 on chromosome 2, complete
              sequence
          Length = 158364

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    ataagctagagaaggaaaag 208
              ||||||||||||||||||||
Sbjct: 111140 ataagctagagaaggaaaag 111121
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>emb|AL928543.5| Mouse DNA sequence from clone RP23-345P1 on chromosome 2, complete
             sequence
          Length = 90551

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   gagacgcaatcaaagcctat 187
             ||||||||||||||||||||
Sbjct: 23998 gagacgcaatcaaagcctat 24017
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>emb|AL845165.4| Mouse DNA sequence from clone RP23-281N9 on chromosome 2, complete
             sequence
          Length = 112789

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    caatgatggagaagtgatac 65
             ||||||||||||||||||||
Sbjct: 40047 caatgatggagaagtgatac 40066


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,454,017
Number of Sequences: 3902068
Number of extensions: 4454017
Number of successful extensions: 102367
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102220
Number of HSP's gapped (non-prelim): 145
length of query: 416
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 394
effective length of database: 17,147,199,772
effective search space: 6755996710168
effective search space used: 6755996710168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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