Clone Name | baak4e06 |
---|---|
Clone Library Name | barley_pub |
>emb|X91347.1|HVUDPGPP H.vulgare mRNA for UDP-glucose pyrophosphorylase Length = 1783 Score = 842 bits (425), Expect = 0.0 Identities = 431/433 (99%) Strand = Plus / Plus Query: 2 cttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1336 cttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctc 1395 Query: 62 tggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaa 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1396 tggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgaccatcgccgccaa 1455 Query: 122 ggctggagtcaagttggagatcccagacggagcggtgcttgagaacaaggacatcaacgg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1456 ggctggagtcaagttggagatcccagacggagcggtgcttgagaacaaggacatcaacgg 1515 Query: 182 cccagaggatatttgagtgacgttcacccgcctgcccgcccaccttctcgcatccccaga 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1516 cccagaggatatttgagtgacgttcacccgcctgcccgcccaccttctcgcatccccaga 1575 Query: 242 aaccttccggtcctcctttgctgagttaaccgtcctgtaatttttcgtgtgcattctgct 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1576 aaccttccggtcctcctttgctgagttaaccgtcctgtaatttttcgtgtgcattctgct 1635 Query: 302 ggggtgttgtcctgcgggagccccgttacataataactgtaatcccctctgtgcggtcca 361 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1636 ggggtgttgtcctgcgggagccccgttacataataactgtaatcccctccgtgcggtcca 1695 Query: 362 ttgacacttccgttcttcctgggagtgccagggacgtaaaatttcttttggttatatgat 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1696 ttgacacttccgttcttcctgggagtgccagggacgtaaaatttcttttggttatatgat 1755 Query: 422 atgatgatgccat 434 ||||||||||||| Sbjct: 1756 atgatgatgccat 1768
>gb|BT009219.1| Triticum aestivum clone wle1n.pk0063.d7:fis, full insert mRNA sequence Length = 1814 Score = 311 bits (157), Expect = 1e-81 Identities = 187/197 (94%) Strand = Plus / Plus Query: 2 cttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctc 61 ||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 1331 cttccttgcccgtttcaagacgatccccagcatcgttgagctcgacagcttgaaggtctc 1390 Query: 62 tggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaa 121 |||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||| Sbjct: 1391 tggtgatgtctcgtttggctctggagtcgtgctcgagggcaacgtgaccatcgcagccaa 1450 Query: 122 ggctggagtcaagttggagatcccagacggagcggtgcttgagaacaaggacatcaacgg 181 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 1451 ggctggagtcaagttggagatcccagacggagctgtgctggagaacaaggacatcaacgg 1510 Query: 182 cccagaggatatttgag 198 ||| |||||| |||||| Sbjct: 1511 cccggaggatctttgag 1527 Score = 238 bits (120), Expect = 1e-59 Identities = 175/191 (91%), Gaps = 3/191 (1%) Strand = Plus / Plus Query: 231 gcatccccagaaaccttccggtcctcctttgctgagttaaccgtcctgtaatttttcgtg 290 |||| |||||||||||||||||||||||| | ||||||||||||||||||||||| |||| Sbjct: 1552 gcattcccagaaaccttccggtcctccttcgttgagttaaccgtcctgtaatttt-cgtg 1610 Query: 291 tgcattctgctggggtgttgtcctgcgggagccccgttacataataactgtaatcccctc 350 ||||||||||||||||||||||||| | |||||| ||||||||||| |||||||||||| Sbjct: 1611 tgcattctgctggggtgttgtcctgggatagcccccttacataataattgtaatcccctc 1670 Query: 351 tgtgcggtccattgacacttccgttcttcctgggagtgccagggacgtaaaatttctttt 410 ||||| || ||| |||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 1671 tgtgctgttcatctacactt--gttcttcctgggcgtgccagggacgtaaaatttctttt 1728 Query: 411 ggttatatgat 421 ||||||||||| Sbjct: 1729 ggttatatgat 1739
>dbj|AK119232.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-E10, full insert sequence Length = 1696 Score = 178 bits (90), Expect = 1e-41 Identities = 170/196 (86%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 3 ttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctct 62 ||||| ||||| || ||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 1306 ttcctggcccggtttaagtcaatccccagcattgtcgagcttgacaccttgaaggtctct 1365 Query: 63 ggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaag 122 |||||||||| ||| ||||||||||| ||||||||| || ||||||||| | |||||| Sbjct: 1366 ggtgatgtctggttcggctctggagttacactcaagggtaaggtgaccatcaccgccaag 1425 Query: 123 gctggagtcaagttggagatcccagacggagcggtgcttgagaacaaggacatcaacggc 182 | || ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1426 tc---agggaagttggagatcccagatggagccgtgcttgagaacaaggacatcaacggt 1482 Query: 183 ccagaggatatttgag 198 || |||||| |||||| Sbjct: 1483 ccggaggatctttgag 1498
>dbj|AK119197.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-C12, full insert sequence Length = 1727 Score = 178 bits (90), Expect = 1e-41 Identities = 170/196 (86%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 3 ttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctct 62 ||||| ||||| || ||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 1307 ttcctggcccggtttaagtcaatccccagcattgtcgagcttgacaccttgaaggtctct 1366 Query: 63 ggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaag 122 |||||||||| ||| ||||||||||| ||||||||| || ||||||||| | |||||| Sbjct: 1367 ggtgatgtctggttcggctctggagttacactcaagggtaaggtgaccatcaccgccaag 1426 Query: 123 gctggagtcaagttggagatcccagacggagcggtgcttgagaacaaggacatcaacggc 182 | || ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1427 tc---agggaagttggagatcccagatggagccgtgcttgagaacaaggacatcaacggt 1483 Query: 183 ccagaggatatttgag 198 || |||||| |||||| Sbjct: 1484 ccggaggatctttgag 1499
>dbj|AK104344.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-B12, full insert sequence Length = 1695 Score = 178 bits (90), Expect = 1e-41 Identities = 170/196 (86%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 3 ttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctct 62 ||||| ||||| || ||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 1305 ttcctggcccggtttaagtcaatccccagcattgtcgagcttgacaccttgaaggtctct 1364 Query: 63 ggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaag 122 |||||||||| ||| ||||||||||| ||||||||| || ||||||||| | |||||| Sbjct: 1365 ggtgatgtctggttcggctctggagttacactcaagggtaaggtgaccatcaccgccaag 1424 Query: 123 gctggagtcaagttggagatcccagacggagcggtgcttgagaacaaggacatcaacggc 182 | || ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1425 tc---agggaagttggagatcccagatggagccgtgcttgagaacaaggacatcaacggt 1481 Query: 183 ccagaggatatttgag 198 || |||||| |||||| Sbjct: 1482 ccggaggatctttgag 1497
>dbj|AK103930.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E03, full insert sequence Length = 1694 Score = 178 bits (90), Expect = 1e-41 Identities = 170/196 (86%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 3 ttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctct 62 ||||| ||||| || ||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 1299 ttcctggcccggtttaagtcaatccccagcattgtcgagcttgacaccttgaaggtctct 1358 Query: 63 ggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaag 122 |||||||||| ||| ||||||||||| ||||||||| || ||||||||| | |||||| Sbjct: 1359 ggtgatgtctggttcggctctggagttacactcaagggtaaggtgaccatcaccgccaag 1418 Query: 123 gctggagtcaagttggagatcccagacggagcggtgcttgagaacaaggacatcaacggc 182 | || ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1419 tc---agggaagttggagatcccagatggagccgtgcttgagaacaaggacatcaacggt 1475 Query: 183 ccagaggatatttgag 198 || |||||| |||||| Sbjct: 1476 ccggaggatctttgag 1491
>dbj|AK065780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039M01, full insert sequence Length = 1750 Score = 178 bits (90), Expect = 1e-41 Identities = 170/196 (86%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 3 ttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctct 62 ||||| ||||| || ||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 1306 ttcctggcccggtttaagtcaatccccagcattgtcgagcttgacaccttgaaggtctct 1365 Query: 63 ggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaag 122 |||||||||| ||| ||||||||||| ||||||||| || ||||||||| | |||||| Sbjct: 1366 ggtgatgtctggttcggctctggagttacactcaagggtaaggtgaccatcaccgccaag 1425 Query: 123 gctggagtcaagttggagatcccagacggagcggtgcttgagaacaaggacatcaacggc 182 | || ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1426 tc---agggaagttggagatcccagatggagccgtgcttgagaacaaggacatcaacggt 1482 Query: 183 ccagaggatatttgag 198 || |||||| |||||| Sbjct: 1483 ccggaggatctttgag 1498
>dbj|AB062606.1| Oryza sativa (japonica cultivar-group) UGP mRNA for UDP-glucose pyrophosphorylase, complete cds Length = 1700 Score = 178 bits (90), Expect = 1e-41 Identities = 170/196 (86%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 3 ttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctct 62 ||||| ||||| || ||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 1286 ttcctggcccggtttaagtcaatccccagcattgtcgagcttgacaccttgaaggtctct 1345 Query: 63 ggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaag 122 |||||||||| ||| ||||||||||| ||||||||| || ||||||||| | |||||| Sbjct: 1346 ggtgatgtctggttcggctctggagttacactcaagggtaaggtgaccatcaccgccaag 1405 Query: 123 gctggagtcaagttggagatcccagacggagcggtgcttgagaacaaggacatcaacggc 182 | || ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1406 tc---agggaagttggagatcccagatggagccgtgcttgagaacaaggacatcaacggt 1462 Query: 183 ccagaggatatttgag 198 || |||||| |||||| Sbjct: 1463 ccggaggatctttgag 1478
>gb|AY178448.1| Bambusa oldhamii UDP-glucose pyrophosphorylase (UGP) mRNA, complete cds Length = 1731 Score = 176 bits (89), Expect = 4e-41 Identities = 164/189 (86%) Strand = Plus / Plus Query: 3 ttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctct 62 ||||| ||||| || || || ||||||||||| ||||||||||||||| ||||||||||| Sbjct: 1330 ttcctagcccgatttaaatcaatccccagcattgtcgagcttgacagcatgaaggtctct 1389 Query: 63 ggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaag 122 |||||||||| |||||||||||| | |||||||||||| ||||||||| |||||||| Sbjct: 1390 ggtgatgtctggtttggctctggcattacactcaagggcaaggtgaccatctctgccaag 1449 Query: 123 gctggagtcaagttggagatcccagacggagcggtgcttgagaacaaggacatcaacggc 182 ||||||| ||| ||||||| ||||| ||| | ||||||||||||||||||||||| || Sbjct: 1450 tctggagtgaagctggagattccagatggaactgtgcttgagaacaaggacatcaatggt 1509 Query: 183 ccagaggat 191 || |||||| Sbjct: 1510 ccggaggat 1518
>gb|BT016795.1| Zea mays clone Contig628 mRNA sequence Length = 1522 Score = 153 bits (77), Expect = 6e-34 Identities = 161/189 (85%) Strand = Plus / Plus Query: 3 ttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctct 62 |||||||| || |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 785 ttccttgctcggttcaagtccatccccagcatcgtcgagcttgacagcttgaaggtttct 844 Query: 63 ggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaag 122 |||||||||| |||||| |||||| | ||||||||||| ||||| ||| | |||||| Sbjct: 845 ggtgatgtctggtttggttctggaattacgctcaagggcaaggtgacaatcaccgccaag 904 Query: 123 gctggagtcaagttggagatcccagacggagcggtgcttgagaacaaggacatcaacggc 182 ||||||| ||||||||| | ||||| ||||| || |||| |||||||| |||| ||| Sbjct: 905 tctggagtgaagttggaggttccagatggagctgtatttgaaaacaaggatgtcaatggc 964 Query: 183 ccagaggat 191 || |||||| Sbjct: 965 cctgaggat 973
>gb|AY103595.1| Zea mays PCO108378 mRNA sequence Length = 1960 Score = 153 bits (77), Expect = 6e-34 Identities = 161/189 (85%) Strand = Plus / Plus Query: 3 ttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctct 62 |||||||| || |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 1371 ttccttgctcggttcaagtccatccccagcatcgtcgagcttgacagcttgaaggtttct 1430 Query: 63 ggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaag 122 |||||||||| |||||| |||||| | ||||||||||| ||||| ||| | |||||| Sbjct: 1431 ggtgatgtctggtttggttctggaattacgctcaagggcaaggtgacaatcaccgccaag 1490 Query: 123 gctggagtcaagttggagatcccagacggagcggtgcttgagaacaaggacatcaacggc 182 ||||||| ||||||||| | ||||| ||||| || |||| |||||||| |||| ||| Sbjct: 1491 tctggagtgaagttggaggttccagatggagctgtatttgaaaacaaggatgtcaatggc 1550 Query: 183 ccagaggat 191 || |||||| Sbjct: 1551 cctgaggat 1559
>gb|BT016879.1| Zea mays clone Contig712 mRNA sequence Length = 1052 Score = 145 bits (73), Expect = 1e-31 Identities = 160/189 (84%) Strand = Plus / Minus Query: 3 ttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctct 62 |||||||| || |||||||| ||||||||||| || |||||||||||||||||||| ||| Sbjct: 434 ttccttgctcggttcaagtccatccccagcatagttgagcttgacagcttgaaggtttct 375 Query: 63 ggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaag 122 |||||||||| ||||||||| ||| | |||||||||||| ||||| || |||||| Sbjct: 374 ggtgatgtctggtttggctccggaattacactcaagggcaaggtgacaattatcgccaag 315 Query: 123 gctggagtcaagttggagatcccagacggagcggtgcttgagaacaaggacatcaacggc 182 ||||||| ||||||||||| ||||| |||| || |||||||||||||| |||| ||| Sbjct: 314 cctggagtgaagttggagattccagatggagacgtacttgagaacaaggatgtcaatggc 255 Query: 183 ccagaggat 191 || |||||| Sbjct: 254 cctgaggat 246
>gb|AF203909.1|AF203909 Musa acuminata UDP-glucose pyrophosphorylase (MWUGPA) mRNA, complete cds Length = 1722 Score = 117 bits (59), Expect = 3e-23 Identities = 155/187 (82%) Strand = Plus / Plus Query: 12 cgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctctggtgatgtc 71 |||||||||||||| || |||||||| |||||||| ||||| ||||| ||||||||||| Sbjct: 1293 cgtttcaagtcgatacctagcatcgttgagcttgatagcttaaaggtttctggtgatgtt 1352 Query: 72 tcgtttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaaggctggagtc 131 | |||||| ||||| ||||| |||||||| |||| |||||||| ||| ||||||| Sbjct: 1353 tggtttggtgaaggagtagtactgaagggcaatgtgagtatcgctgcaaagtctggagta 1412 Query: 132 aagttggagatcccagacggagcggtgcttgagaacaaggacatcaacggcccagaggat 191 |||||||||||| | || ||||| || || |||||||||| ||||| ||||| || ||| Sbjct: 1413 aagttggagatctctgatggagccgtcctcgagaacaaggtgatcaatggccccgaagat 1472 Query: 192 atttgag 198 || |||| Sbjct: 1473 atctgag 1479
>gb|BT018223.1| Zea mays clone EL01N0561D12.c mRNA sequence Length = 1307 Score = 111 bits (56), Expect = 2e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 3 ttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctct 62 |||||||| || |||||||| ||||||||||| || |||||||||||||||||||| ||| Sbjct: 570 ttccttgctcggttcaagtccatccccagcatagttgagcttgacagcttgaaggtttct 629 Query: 63 ggtgatgtctcgtttggctctgga 86 |||||||||| ||||||||||||| Sbjct: 630 ggtgatgtctggtttggctctgga 653 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 117 gccaaggctggagtcaagttggagatcccagacggagcggtgcttgagaacaagg 171 |||||| ||||||| ||||||||||| ||||| |||| || ||||||||||||| Sbjct: 1008 gccaagcctggagtgaagttggagattccagatggagacgtacttgagaacaagg 1062
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05, complete sequence Length = 141200 Score = 107 bits (54), Expect = 3e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 3 ttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctct 62 ||||| ||||| || ||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 76895 ttcctggcccggtttaagtcaatccccagcattgtcgagcttgacaccttgaaggtctct 76954 Query: 63 ggtgatgtctcgtttggctctggagt 88 |||||||||| ||| ||||||||||| Sbjct: 76955 ggtgatgtctggttcggctctggagt 76980 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 132 aagttggagatcccagacggagcggtgcttgagaacaagg 171 ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 77231 aagttggagatcccagatggagccgtgcttgagaacaagg 77270
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 107 bits (54), Expect = 3e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 3 ttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctct 62 ||||| ||||| || ||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 21620269 ttcctggcccggtttaagtcaatccccagcattgtcgagcttgacaccttgaaggtctct 21620328 Query: 63 ggtgatgtctcgtttggctctggagt 88 |||||||||| ||| ||||||||||| Sbjct: 21620329 ggtgatgtctggttcggctctggagt 21620354 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 132 aagttggagatcccagacggagcggtgcttgagaacaagg 171 ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 21620605 aagttggagatcccagatggagccgtgcttgagaacaagg 21620644
>dbj|AP005564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1228_C03, complete sequence Length = 31468 Score = 107 bits (54), Expect = 3e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 3 ttccttgcccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctct 62 ||||| ||||| || ||||| ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 28593 ttcctggcccggtttaagtcaatccccagcattgtcgagcttgacaccttgaaggtctct 28652 Query: 63 ggtgatgtctcgtttggctctggagt 88 |||||||||| ||| ||||||||||| Sbjct: 28653 ggtgatgtctggttcggctctggagt 28678 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 132 aagttggagatcccagacggagcggtgcttgagaacaagg 171 ||||||||||||||||| ||||| |||||||||||||||| Sbjct: 28929 aagttggagatcccagatggagccgtgcttgagaacaagg 28968
>ref|XM_463887.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1769 Score = 95.6 bits (48), Expect = 1e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 15 ttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctctggtgatgtctcg 74 |||||||| ||||||||||| || |||||||||| ||||||||| || |||||||| | | Sbjct: 1285 ttcaagtcaatccccagcattgttgagcttgacaccttgaaggtttccggtgatgtttgg 1344 Query: 75 tttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaaggctggagtcaag 134 ||||||||| | || | | |||||||| ||||||||| | ||| | |||| ||||| Sbjct: 1345 tttggctctagcatcacattgaagggcaaggtgaccatcacagcccaacctggtgtcaaa 1404 Query: 135 ttggagatcccagacggagcggtgcttgagaacaaggacatcaacggcccagagga 190 |||| |||||||| ||||| ||| | ||||||||||| ||||| ||||| ||||| Sbjct: 1405 ctggaaatcccagatggagcagtgatcgagaacaaggatatcaatggccccgagga 1460
>gb|AF249880.1|AF249880 Oryza sativa subsp. indica UDP-glucose pyrophosphorylase (UDPGase) mRNA, complete cds Length = 1746 Score = 95.6 bits (48), Expect = 1e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 15 ttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctctggtgatgtctcg 74 |||||||| ||||||||||| || |||||||||| ||||||||| || |||||||| | | Sbjct: 1272 ttcaagtcaatccccagcattgttgagcttgacaccttgaaggtttccggtgatgtttgg 1331 Query: 75 tttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaaggctggagtcaag 134 ||||||||| | || | | |||||||| ||||||||| | ||| | |||| ||||| Sbjct: 1332 tttggctctagcatcacattgaagggcaaggtgaccatcacagcccaacctggtgtcaaa 1391 Query: 135 ttggagatcccagacggagcggtgcttgagaacaaggacatcaacggcccagagga 190 |||| |||||||| ||||| ||| | ||||||||||| ||||| ||||| ||||| Sbjct: 1392 ctggaaatcccagatggagcagtgatcgagaacaaggatatcaatggccccgagga 1447
>dbj|AK071248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088D10, full insert sequence Length = 1769 Score = 95.6 bits (48), Expect = 1e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 15 ttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctctggtgatgtctcg 74 |||||||| ||||||||||| || |||||||||| ||||||||| || |||||||| | | Sbjct: 1285 ttcaagtcaatccccagcattgttgagcttgacaccttgaaggtttccggtgatgtttgg 1344 Query: 75 tttggctctggagtcgtactcaagggcaacgtgaccatcgctgccaaggctggagtcaag 134 ||||||||| | || | | |||||||| ||||||||| | ||| | |||| ||||| Sbjct: 1345 tttggctctagcatcacattgaagggcaaggtgaccatcacagcccaacctggtgtcaaa 1404 Query: 135 ttggagatcccagacggagcggtgcttgagaacaaggacatcaacggcccagagga 190 |||| |||||||| ||||| ||| | ||||||||||| ||||| ||||| ||||| Sbjct: 1405 ctggaaatcccagatggagcagtgatcgagaacaaggatatcaatggccccgagga 1460
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 15 ttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctctggtgatgtctcg 74 |||||||| ||||||||||| || |||||||||| ||||||||| || |||||||| | | Sbjct: 927011 ttcaagtcaatccccagcattgttgagcttgacaccttgaaggtttccggtgatgtttgg 926952 Query: 75 tttggctct 83 ||||||||| Sbjct: 926951 tttggctct 926943
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 15 ttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctctggtgatgtctcg 74 |||||||| ||||||||||| || |||||||||| ||||||||| || |||||||| | | Sbjct: 136219 ttcaagtcaatccccagcattgttgagcttgacaccttgaaggtttccggtgatgtttgg 136160 Query: 75 tttggctct 83 ||||||||| Sbjct: 136159 tttggctct 136151
>dbj|AB013353.1| Pyrus pyrifolia mRNA for UDP-glucose pyrophosphorylase, complete cds Length = 1699 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 15 ttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctctggtgatgtct 72 |||||||| |||||||||||| | |||||||| ||| | ||||| ||||||||||||| Sbjct: 1322 ttcaagtcaatccccagcatccttgagcttgagagccttaaggtttctggtgatgtct 1379
>ref|NM_111195.2| Arabidopsis thaliana UGP; UTP-glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase AT3G03250 (UGP) mRNA, complete cds Length = 1837 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 36 gtcgagcttgacagcttgaaggtctctggtgatgtctcgtttggctct 83 |||||||| |||||| | ||||| ||||||||||||| |||||||||| Sbjct: 1394 gtcgagctcgacagccttaaggtgtctggtgatgtctggtttggctct 1441
>gb|AC012328.6|ATAC012328 Arabidopsis thaliana chromosome III BAC T17B22 genomic sequence, complete sequence Length = 96540 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 36 gtcgagcttgacagcttgaaggtctctggtgatgtctcgtttggctct 83 |||||||| |||||| | ||||| ||||||||||||| |||||||||| Sbjct: 30459 gtcgagctcgacagccttaaggtgtctggtgatgtctggtttggctct 30506
>gb|AY059148.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At3g03250) mRNA, complete cds Length = 1441 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 36 gtcgagcttgacagcttgaaggtctctggtgatgtctcgtttggctct 83 |||||||| |||||| | ||||| ||||||||||||| |||||||||| Sbjct: 1249 gtcgagctcgacagccttaaggtgtctggtgatgtctggtttggctct 1296
>gb|AY035071.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At3g03250) mRNA, complete cds Length = 1795 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 36 gtcgagcttgacagcttgaaggtctctggtgatgtctcgtttggctct 83 |||||||| |||||| | ||||| ||||||||||||| |||||||||| Sbjct: 1335 gtcgagctcgacagccttaaggtgtctggtgatgtctggtttggctct 1382
>gb|AF361605.1| Arabidopsis thaliana AT3g03250/T17B22_6 mRNA, complete cds Length = 1739 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 36 gtcgagcttgacagcttgaaggtctctggtgatgtctcgtttggctct 83 |||||||| |||||| | ||||| ||||||||||||| |||||||||| Sbjct: 1320 gtcgagctcgacagccttaaggtgtctggtgatgtctggtttggctct 1367
>emb|BX825911.1|CNS0A4WW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL71ZF10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1685 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 36 gtcgagcttgacagcttgaaggtctctggtgatgtctcgtttggctct 83 |||||||| |||||| | ||||| ||||||||||||| |||||||||| Sbjct: 1312 gtcgagctcgacagccttaaggtgtctggtgatgtctggtttggctct 1359
>emb|BX823422.1|CNS0A4T5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS38ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 36 gtcgagcttgacagcttgaaggtctctggtgatgtctcgtttggctct 83 |||||||| |||||| | ||||| ||||||||||||| |||||||||| Sbjct: 1259 gtcgagctcgacagccttaaggtgtctggtgatgtctggtttggctct 1306
>ref|NM_180506.1| Arabidopsis thaliana UTP-glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase AT5G17310 transcript variant AT5G17310.1 mRNA, complete cds Length = 1516 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 156 gtgcttgagaacaaggacatcaacggcccagaggat 191 ||||| ||||| |||||||||||||| ||||||||| Sbjct: 1167 gtgctcgagaataaggacatcaacggtccagaggat 1202 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 54 aaggtctctggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgac 109 |||||||| |||||||| | ||||||||| || || || ||||||||||| ||||| Sbjct: 1065 aaggtctcaggtgatgtttggtttggctccggcgttgttctcaagggcaaagtgac 1120
>ref|NM_121737.2| Arabidopsis thaliana UTP-glucose-1-phosphate uridylyltransferase/ nucleotidyltransferase AT5G17310 transcript variant AT5G17310.2 mRNA, complete cds Length = 1798 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 156 gtgcttgagaacaaggacatcaacggcccagaggat 191 ||||| ||||| |||||||||||||| ||||||||| Sbjct: 1449 gtgctcgagaataaggacatcaacggtccagaggat 1484 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 54 aaggtctctggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgac 109 |||||||| |||||||| | ||||||||| || || || ||||||||||| ||||| Sbjct: 1347 aaggtctcaggtgatgtttggtttggctccggcgttgttctcaagggcaaagtgac 1402
>gb|AY040042.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At5g17310) mRNA, complete cds Length = 1413 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 156 gtgcttgagaacaaggacatcaacggcccagaggat 191 ||||| ||||| |||||||||||||| ||||||||| Sbjct: 1372 gtgctcgagaataaggacatcaacggtccagaggat 1407 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 54 aaggtctctggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgac 109 |||||||| |||||||| | ||||||||| || || || ||||||||||| ||||| Sbjct: 1270 aaggtctcaggtgatgtttggtttggctccggcgttgttctcaagggcaaagtgac 1325
>gb|AF360244.1| Arabidopsis thaliana putative UDP-glucose pyrophosphorylase (At5g17310) mRNA, complete cds Length = 1628 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 156 gtgcttgagaacaaggacatcaacggcccagaggat 191 ||||| ||||| |||||||||||||| ||||||||| Sbjct: 1449 gtgctcgagaataaggacatcaacggtccagaggat 1484 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 54 aaggtctctggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgac 109 |||||||| |||||||| | ||||||||| || || || ||||||||||| ||||| Sbjct: 1347 aaggtctcaggtgatgtttggtttggctccggcgttgttctcaagggcaaagtgac 1402
>gb|AF361816.1| Arabidopsis thaliana AT5g17310/MKP11_16 mRNA, complete cds Length = 1800 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 156 gtgcttgagaacaaggacatcaacggcccagaggat 191 ||||| ||||| |||||||||||||| ||||||||| Sbjct: 1450 gtgctcgagaataaggacatcaacggtccagaggat 1485 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 54 aaggtctctggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgac 109 |||||||| |||||||| | ||||||||| || || || ||||||||||| ||||| Sbjct: 1348 aaggtctcaggtgatgtttggtttggctccggcgttgttctcaagggcaaagtgac 1403
>emb|BX831255.1|CNS0A26Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1571 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 156 gtgcttgagaacaaggacatcaacggcccagaggat 191 ||||| ||||| |||||||||||||| ||||||||| Sbjct: 1429 gtgctcgagaataaggacatcaacggtccagaggat 1464 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Plus Query: 54 aaggtctctggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgac 109 |||||||| |||||||| | ||||||||| || || || ||||||||||| ||||| Sbjct: 1327 aaggtctcaggtgatgtttggtttggctccggcgttgttctcaagggcaaagtgac 1382
>dbj|AB005238.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKP11 Length = 75188 Score = 48.1 bits (24), Expect = 0.025 Identities = 48/56 (85%) Strand = Plus / Minus Query: 54 aaggtctctggtgatgtctcgtttggctctggagtcgtactcaagggcaacgtgac 109 |||||||| |||||||| | ||||||||| || || || ||||||||||| ||||| Sbjct: 56178 aaggtctcaggtgatgtttggtttggctccggcgttgttctcaagggcaaagtgac 56123
>gb|AY082622.1| Solanum tuberosum BelRus UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 11 ccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggt 58 |||||||||||| || ||||||||| |||| || || ||||||||||| Sbjct: 1248 ccgtttcaagtctattcccagcatcatcgatctagatagcttgaaggt 1295
>gb|AC108877.2| Drosophila melanogaster 3L BAC RP98-17L24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163709 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 cccgtttcaagtcgatcccca 30 ||||||||||||||||||||| Sbjct: 124627 cccgtttcaagtcgatcccca 124647
>gb|AE003482.4| Drosophila melanogaster chromosome 3L, section 16 of 83 of the complete sequence Length = 302417 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 cccgtttcaagtcgatcccca 30 ||||||||||||||||||||| Sbjct: 281456 cccgtttcaagtcgatcccca 281476
>dbj|AB055502.1| Nicotiana tabacum NtUGPase mRNA for UDP-glucose pyrophosphorylase, partial cds Length = 1128 Score = 42.1 bits (21), Expect = 1.5 Identities = 63/77 (81%) Strand = Plus / Plus Query: 12 cgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggtctctggtgatgtc 71 ||||||||||| || ||||||||| | || || || ||||| ||||| | |||||||| Sbjct: 967 cgtttcaagtctattcccagcatcattgatctagatagcttaaaggtgacgggtgatgta 1026 Query: 72 tcgtttggctctggagt 88 | |||||| |||||||| Sbjct: 1027 tggtttggatctggagt 1043
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 cgttcacccgcctgcccgcc 221 |||||||||||||||||||| Sbjct: 3059631 cgttcacccgcctgcccgcc 3059650
>gb|U20345.1|STU20345 Solanum tuberosum UDP-glucose pyrophosphorylase (UGPase) gene, UGPase-Lemhi10 allele, complete cds Length = 7646 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 11 ccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggt 58 |||||||||||| || ||||||||| | || || || ||||||||||| Sbjct: 7133 ccgtttcaagtctattcccagcatcattgatctcgatagcttgaaggt 7180
>gb|DQ191641.1| Solanum tuberosum UDP-glucose pyrophosphorylase-like protein mRNA, complete cds Length = 1671 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 11 ccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggt 58 |||||||||||| || ||||||||| | || || || ||||||||||| Sbjct: 1319 ccgtttcaagtctattcccagcatcattgatctagatagcttgaaggt 1366
>gb|AC105470.17| Rattus norvegicus 10 BAC CH230-192N7 (Children's Hospital Oakland Research Institute) complete sequence Length = 212491 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cacccgcctgcccgcccacc 225 |||||||||||||||||||| Sbjct: 98753 cacccgcctgcccgcccacc 98734
>ref|XM_754216.1| Ustilago maydis 521 hypothetical protein (UM03162.1) partial mRNA Length = 2046 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 gcatcgtcgagcttgacagc 50 |||||||||||||||||||| Sbjct: 545 gcatcgtcgagcttgacagc 526
>gb|AC129012.4| Mus musculus BAC clone RP24-545L10 from chromosome 10, complete sequence Length = 143029 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tgaaggtctctggtgatgtc 71 |||||||||||||||||||| Sbjct: 114538 tgaaggtctctggtgatgtc 114519
>gb|AC144713.2| Danio rerio clone CH211-6O1, complete sequence Length = 153992 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 acagcttgaaggtctctggt 65 |||||||||||||||||||| Sbjct: 86363 acagcttgaaggtctctggt 86344
>emb|AL158135.5| Human DNA sequence from clone RP1-304H12 on chromosome 6, complete sequence Length = 64854 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 ttttggttatatgatatgatgatg 430 ||||||| |||||||||||||||| Sbjct: 39097 ttttggtcatatgatatgatgatg 39074
>emb|AL132765.38|HSA462D18 Human DNA sequence from clone RP11-462D18 on chromosome 20 Contains the 5' end of the BFSP1 gene for beaded filament structural protein 1 (filensin), the DSTN gene for destrin (actin depolymerizing factor ADF), a ras-like pseudogene, the RRBP1 gene for ribosome binding protein 1 (dog 180 kDa homolog), the 5' end of the C20orf179 gene for chromosome 20 open reading frame 179 and two CpG islands, complete sequence Length = 166001 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 gttcttcctgggagtgccag 392 |||||||||||||||||||| Sbjct: 126650 gttcttcctgggagtgccag 126669
>emb|AL646093.9| Mouse DNA sequence from clone RP23-55I2 on chromosome 11 Contains the Kcnj12 gene for potassium inwardly-rectifying channel subfamily J member 12, a ribosomal protein L27a (Rpl27a) pseudogene, the Tnfrsf13b gene for tumor necrosis factor receptor superfamily member 13b, the Usp22 gene for ubiquitin specific protease 22, a ribosomal protein S13 (Rps13) pseudogene, the Aldh3a1 gene for aldehyde dehydrogenase family 3 subfamily A1, the 3' end of one variant of the Aldh3a2 gene for aldehyde dehydrogenase family 3 subfamily A2 and three CpG islands, complete sequence Length = 241400 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 cacccgcctgcccgcccacc 225 |||||||||||||||||||| Sbjct: 17664 cacccgcctgcccgcccacc 17683
>gb|AY942707.1| Streptomyces noursei ATCC 11455 lantibiotic biosynthesis gene cluster, complete sequence Length = 13830 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cacccgcctgcccgcccacc 225 |||||||||||||||||||| Sbjct: 5091 cacccgcctgcccgcccacc 5072
>gb|AC096627.28| Mus musculus strain C57BL/6J clone rp23-77b23 map 11, complete sequence Length = 264908 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 cacccgcctgcccgcccacc 225 |||||||||||||||||||| Sbjct: 195131 cacccgcctgcccgcccacc 195150
>emb|BX004831.16| Zebrafish DNA sequence from clone BUSM1-143H6 in linkage group 7, complete sequence Length = 119156 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 acagcttgaaggtctctggt 65 |||||||||||||||||||| Sbjct: 69434 acagcttgaaggtctctggt 69415
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tatatgatatgatgatgcca 433 |||||||||||||||||||| Sbjct: 3257799 tatatgatatgatgatgcca 3257780
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tatatgatatgatgatgcca 433 |||||||||||||||||||| Sbjct: 35366 tatatgatatgatgatgcca 35347
>emb|Z18924.1|STUDPGPYP S.tuberosum mRNA for UDP-glucose pyrophosphorylase Length = 1683 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 11 ccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggt 58 |||||||||||| || ||||||||| | || || || ||||||||||| Sbjct: 1331 ccgtttcaagtctattcccagcatcattgatctagatagcttgaaggt 1378
>gb|AC004542.1|AC004542 Homo sapiens PAC clone RP3-430N8 from 22q12.1-qter, complete sequence Length = 134914 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 taaaatttcttttggttata 417 |||||||||||||||||||| Sbjct: 115060 taaaatttcttttggttata 115041
>emb|BX001033.6| Zebrafish DNA sequence from clone CH211-286F4 in linkage group 7, complete sequence Length = 144689 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 acagcttgaaggtctctggt 65 |||||||||||||||||||| Sbjct: 15280 acagcttgaaggtctctggt 15261
>gb|AY082623.1| Solanum tuberosum Russet Burbank-2 UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 11 ccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggt 58 |||||||||||| || ||||||||| | || || || ||||||||||| Sbjct: 1248 ccgtttcaagtctattcccagcatcattgatctagatagcttgaaggt 1295
>gb|AY082621.1| Solanum tuberosum Redsen UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 11 ccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggt 58 |||||||||||| || ||||||||| | || || || ||||||||||| Sbjct: 1248 ccgtttcaagtctattcccagcatcattgatctagatagcttgaaggt 1295
>gb|AY082620.1| Solanum tuberosum Norchip UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 11 ccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggt 58 |||||||||||| || ||||||||| | || || || ||||||||||| Sbjct: 1248 ccgtttcaagtctattcccagcatcattgatctagatagcttgaaggt 1295
>gb|AY082619.1| Solanum tuberosum Russet Burbank-1 UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 11 ccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggt 58 |||||||||||| || ||||||||| | || || || ||||||||||| Sbjct: 1248 ccgtttcaagtctattcccagcatcattgatctagatagcttgaaggt 1295
>gb|AY082618.1| Solanum tuberosum ND860-2 UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 11 ccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggt 58 |||||||||||| || ||||||||| | || || || ||||||||||| Sbjct: 1248 ccgtttcaagtctattcccagcatcattgatctagatagcttgaaggt 1295
>gb|AY082617.1| Solanum tuberosum Snowden UTP:alpha-D-glucose-1-phosphate uridylyltransferase mRNA, complete cds Length = 1434 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 11 ccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggt 58 |||||||||||| || ||||||||| | || || || ||||||||||| Sbjct: 1248 ccgtttcaagtctattcccagcatcattgatctagatagcttgaaggt 1295
>dbj|D00667.1|POTUDPGP Solanum tuberosum mRNA for UDP-glucose pyrophosphorylase, complete cds Length = 1758 Score = 40.1 bits (20), Expect = 6.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 11 ccgtttcaagtcgatccccagcatcgtcgagcttgacagcttgaaggt 58 |||||||||||| || ||||||||| | || || || ||||||||||| Sbjct: 1387 ccgtttcaagtctattcccagcatcattgatctagatagcttgaaggt 1434
>emb|AL589870.30| Mouse DNA sequence from clone RP23-118A2 on chromosome 2, complete sequence Length = 202686 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cacccgcctgcccgcccacc 225 |||||||||||||||||||| Sbjct: 135196 cacccgcctgcccgcccacc 135177 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,203,303 Number of Sequences: 3902068 Number of extensions: 3203303 Number of successful extensions: 63122 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62956 Number of HSP's gapped (non-prelim): 159 length of query: 444 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 422 effective length of database: 17,147,199,772 effective search space: 7236118303784 effective search space used: 7236118303784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)