Clone Name | baak4e03 |
---|---|
Clone Library Name | barley_pub |
>PEL8_ARATH (Q9M8Z8) Probable pectate lyase 8 precursor (EC 4.2.2.2)| Length = 416 Score = 33.1 bits (74), Expect = 0.72 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%) Frame = +3 Query: 42 FSGDLQVVIIQDFKWYSFL------LKLHRLYGGTHLTVNGVSSIRVQSIEVAEVVPNGD 203 F D+ + + Q+ SF + +H + G LT+ V++I V I V + P G+ Sbjct: 139 FKRDMVITLKQELIMNSFKTIDGRGVNVH-IANGACLTIQYVTNIIVHGIHVHDCKPTGN 197 Query: 204 VFVQSDGEHFGF 239 V+S H+GF Sbjct: 198 AMVRSSPSHYGF 209
>YAMB_SCHPO (Q10064) Hypothetical protein C1F5.11c in chromosome I| Length = 3655 Score = 33.1 bits (74), Expect = 0.72 Identities = 18/47 (38%), Positives = 24/47 (51%) Frame = -3 Query: 608 QLVYEHRRLSCCSRILVYMQEKLHGGWLPHSSNLFHLLTTCQKTSEW 468 QLVYEH +L C+ L Y + HG WL H + QK ++W Sbjct: 2570 QLVYEHAQLKVCTGSLPYSPTE-HGFWLD------HWILCAQKLNQW 2609
>HAT2_GIBZE (Q4I7L0) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)| Length = 423 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = +3 Query: 102 KLHRLYGGTHLTVNGVSSIRVQSIEVAEVV-PNGDVFVQSDGEHFGF 239 K+HRL GTH + + +++ +++ +VV PN D + + GE G+ Sbjct: 57 KIHRLLLGTHTSDESPNYLQIADVQIPKVVAPNPDDYDEERGEIGGY 103
>PIN2_ARATH (Q9LU77) Auxin efflux carrier component 2 (AtPIN2) (Auxin efflux| carrier AGR) (Polar-auxin-transport efflux component AGRAVITROPIC 1) (AtAGR1) (Ethylene insensitive root 1) (AtEIR1) (WAVY6) Length = 647 Score = 30.8 bits (68), Expect = 3.6 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 9/71 (12%) Frame = +3 Query: 42 FSGDL--QVVIIQDFKWYSFLLKLHRLYGGTHL-------TVNGVSSIRVQSIEVAEVVP 194 FSG+L Q+V++Q WY+ +L L G L T ++S RV S ++ Sbjct: 128 FSGNLMVQIVVLQSIIWYTLMLFLFEFRGAKLLISEQFPETAGSITSFRVDSDVIS---L 184 Query: 195 NGDVFVQSDGE 227 NG +Q+D E Sbjct: 185 NGREPLQTDAE 195
>Y335B_MYCGE (Q9ZB73) Hypothetical protein MG335.2| Length = 341 Score = 30.8 bits (68), Expect = 3.6 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = -3 Query: 308 KKRHSGLAEEIYCGRQNQESGREKTEVL 225 KK H+ LA E+YC +QN+ G+ + +++ Sbjct: 54 KKEHNNLAIEVYCDKQNEGIGKVRDKLV 81
>YM96_YEAST (Q04893) Hypothetical 113.1 kDa protein in PRE5-FET4 intergenic| region Length = 1140 Score = 30.4 bits (67), Expect = 4.6 Identities = 20/71 (28%), Positives = 28/71 (39%) Frame = -1 Query: 385 EQKRVGEGSCVFCDHASSVHRRNPTGRNGTAV*LKKSTAAGRTKNLVGRKPKCSPSDCTK 206 E K+ GS +S V + +PT + + +S AAG T P SPS+ Sbjct: 958 ETKKAKPGSETVRSSSSFVEKTSPTTKASPSTSPSESKAAGNTSVATNASPSTSPSESQG 1017 Query: 205 TSPLGTTSATS 173 T A S Sbjct: 1018 TGSTSVEGAKS 1028
>PEL14_ARATH (Q9SVQ6) Putative pectate lyase 14 precursor (EC 4.2.2.2)| Length = 418 Score = 30.0 bits (66), Expect = 6.1 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 6/72 (8%) Frame = +3 Query: 42 FSGDLQVVIIQDFKWYSFL------LKLHRLYGGTHLTVNGVSSIRVQSIEVAEVVPNGD 203 F D+ + + Q+ SF + +H + GG LTV V++I + I + + G+ Sbjct: 141 FKRDMVITLSQELIMNSFKTIDGRGVNVH-IAGGACLTVQYVTNIIIHGINIHDCKRTGN 199 Query: 204 VFVQSDGEHFGF 239 V+S H+G+ Sbjct: 200 AMVRSSESHYGW 211
>AFLR_EMENI (P52957) Sterigmatocystin biosynthesis regulatory protein| Length = 433 Score = 30.0 bits (66), Expect = 6.1 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 5/67 (7%) Frame = -1 Query: 361 SCVFCDHAS-SVHRRNPTG----RNGTAV*LKKSTAAGRTKNLVGRKPKCSPSDCTKTSP 197 SC+ C + ++ PT R G S GRT+ + +PK +PS T T+ Sbjct: 27 SCISCSRSKVKCNKEKPTCSRCVRRGLPCEYMVSRRTGRTRVIGVEQPKTAPSPTTPTNT 86 Query: 196 LGTTSAT 176 T+AT Sbjct: 87 TAATTAT 93
>PIN3B_ORYSA (Q6L5F6) Putative auxin efflux carrier component 3b (OsPIN3b)| Length = 590 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 2/25 (8%) Frame = +3 Query: 39 PFSGDL--QVVIIQDFKWYSFLLKL 107 P+SGDL Q+V++Q WY+ LL L Sbjct: 133 PYSGDLMVQIVVLQSIVWYTLLLFL 157
>PEL15_ARATH (Q944R1) Probable pectate lyase 15 precursor (EC 4.2.2.2) (Pectate| lyase A11) Length = 470 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/61 (21%), Positives = 29/61 (47%) Frame = +3 Query: 57 QVVIIQDFKWYSFLLKLHRLYGGTHLTVNGVSSIRVQSIEVAEVVPNGDVFVQSDGEHFG 236 Q +I+ FK + G +T+ ++++ + + + + P G+ V+S HFG Sbjct: 203 QELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFG 262 Query: 237 F 239 + Sbjct: 263 W 263 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,054,097 Number of Sequences: 219361 Number of extensions: 2069147 Number of successful extensions: 4740 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4578 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4740 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)