ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018864.1| Zea mays clone EL01N0561A06.d mRNA sequence 365 1e-97
2ref|XM_478883.1| Oryza sativa (japonica cultivar-group), mRNA 361 2e-96
3dbj|AK103439.1| Oryza sativa (japonica cultivar-group) cDNA clon... 361 2e-96
4gb|AY109242.1| Zea mays PCO115415 mRNA sequence 143 8e-31
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
6dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
7dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
8dbj|AK061656.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 1e-23
9dbj|AP007299.1| Lotus japonicus genomic DNA, clone:LjT30I08, TM0... 80 1e-11
10ref|NM_103589.3| Arabidopsis thaliana unknown protein AT1G45150 ... 68 4e-08
11gb|BT008320.1| Arabidopsis thaliana At1g45150 gene, complete cds 68 4e-08
12gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana... 68 4e-08
13emb|BX815785.1|CNS0AE0H Arabidopsis thaliana Full-length cDNA Co... 60 9e-06
14emb|AL773519.5| Mouse DNA sequence from clone RP23-42C15 on chro... 46 0.14
15emb|AL591363.4| Human DNA sequence from clone RP11-45P22 on chro... 44 0.54
16gb|AC154205.1| Mus musculus BAC clone RP24-88I1 from chromosome ... 44 0.54
17gb|AC102240.12| Mus musculus chromosome 18, clone RP24-122C12, c... 42 2.1
18gb|AC157910.4| Mus musculus chromosome 18, clone RP24-372A6, com... 42 2.1
19emb|AL158089.8| Human DNA sequence from clone RP3-487D22 on chro... 42 2.1
20emb|AL603907.12| Mouse DNA sequence from clone RP23-139D10 on ch... 42 2.1
21emb|CR388144.17| Zebrafish DNA sequence from clone DKEY-21I17 in... 42 2.1
22emb|CR361554.35| Zebrafish DNA sequence from clone CH211-222L15 ... 42 2.1
23gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, comp... 40 8.5
24ref|NM_008482.1| Mus musculus laminin B1 subunit 1 (Lamb1-1), mRNA 40 8.5
25emb|CR381650.15| Zebrafish DNA sequence from clone CH211-129F24 ... 40 8.5
26emb|AL513344.15| Human DNA sequence from clone RP11-71D4 on chro... 40 8.5
27emb|AL929198.3| Zebrafish DNA sequence from clone BUSM1-112P11 i... 40 8.5
28dbj|AK143079.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 8.5
29dbj|AK147313.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 8.5
30ref|XM_687179.1| PREDICTED: Danio rerio similar to chromosome 17... 40 8.5
31gb|AF176315.2|AF176315 Homo sapiens chromosome 3 clone RP11-83M1... 40 8.5
32gb|AC126943.5| Mus musculus BAC clone RP23-307F3 from chromosome... 40 8.5
33gb|AC008151.1| Homo sapiens 3 BAC CITB-243A6 (California Institu... 40 8.5
34emb|CR974423.21| Mouse DNA sequence from clone RP23-182F9 on chr... 40 8.5
35emb|BX294167.5| Zebrafish DNA sequence from clone CH211-244O18 i... 40 8.5
36emb|BX001015.5| Zebrafish DNA sequence from clone CH211-261D18 i... 40 8.5
37gb|AC147256.3| Mus musculus BAC clone RP24-147G24 from 12, compl... 40 8.5
38emb|AL953879.7| Zebrafish DNA sequence from clone CH211-151G18, ... 40 8.5
39emb|CR759836.11| Zebrafish DNA sequence from clone CH211-254B14 ... 40 8.5
40emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 8.5
41gb|M15525.1|MUSLAMB1A Mouse laminin B1 mRNA, complete cds 40 8.5
42gb|AC068312.5| Homo sapiens chromosome 3 clone RP11-128A5 map 3p... 40 8.5 
>gb|BT018864.1| Zea mays clone EL01N0561A06.d mRNA sequence
          Length = 1855

 Score =  365 bits (184), Expect = 1e-97
 Identities = 256/280 (91%)
 Strand = Plus / Plus

                                                                        
Query: 341  gtccaagtggttctgaactggctccttctacgtttgaggcttttgcgaaagttccaaatg 400
            |||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||
Sbjct: 1157 gtccaagtggctctgaactggctccctctacatttgaagcttttgcaaaagttccaaatg 1216

                                                                        
Query: 401  ttctacgtccgcatacacaaatcttttgcactagtgaatgggttcttggcacaagagagg 460
            |||| |||||||| || |||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 1217 ttctgcgtccgcacacgcaaatcttttgcacaagtgaatgggttcttggcacaagagaag 1276

                                                                        
Query: 461  acttagtgaaggatattattgccgaactacgacctgaccttggtgaagagtggtggacat 520
            || |||||||||||||| |||| ||| |||| ||||| |||||||| |||||||||||||
Sbjct: 1277 acctagtgaaggatattgttgctgaattacggcctgatcttggtgaggagtggtggacat 1336

                                                                        
Query: 521  atgtttgtatgggcccttctgatcctcaaccaaattggcaccttgggatgcgcggaaccc 580
            ||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 1337 atgtttgtatgggtccttctgatcctcaaccaaactggcaccttgggatgcgtggaaccc 1396

                                                    
Query: 581  agcatcgggcagtgatgtggagagcatggaaggagggtgg 620
            |||| |||||||||||||||||||  |||||||| |||||
Sbjct: 1397 agcaccgggcagtgatgtggagagtgtggaaggaaggtgg 1436



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                        
Query: 267  atgagccattgaatatggagcagtacgaagtgatctgcaacatctctaatgagttaagga 326
            |||||||||| ||| |||| ||||| ||  |||| |||||||||||||||||| || || 
Sbjct: 1055 atgagccattaaatgtggaacagtatgacatgatatgcaacatctctaatgagctacggt 1114

                            
Query: 327  catacacacctgatgt 342
            ||||  ||||||||||
Sbjct: 1115 catatgcacctgatgt 1130
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>ref|XM_478883.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2434

 Score =  361 bits (182), Expect = 2e-96
 Identities = 254/278 (91%)
 Strand = Plus / Plus

                                                                        
Query: 343  ccaagtggttctgaactggctccttctacgtttgaggcttttgcgaaagttccaaatgtt 402
            ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||
Sbjct: 1488 ccaagtggttctgaactggctccttctacatttgaggcctttgtgaaagttccaaatgtt 1547

                                                                        
Query: 403  ctacgtccgcatacacaaatcttttgcactagtgaatgggttcttggcacaagagaggac 462
            |||||||| ||||| || || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 1548 ctacgtccacatacgcagatattttgcacaagtgaatgggttcttggcacgagagaggac 1607

                                                                        
Query: 463  ttagtgaaggatattattgccgaactacgacctgaccttggtgaagagtggtggacatat 522
            || |||||||||||| |||| |||||||||||||| ||||||||||| ||||||||||||
Sbjct: 1608 ttggtgaaggatattgttgctgaactacgacctgatcttggtgaagaatggtggacatat 1667

                                                                        
Query: 523  gtttgtatgggcccttctgatcctcaaccaaattggcaccttgggatgcgcggaacccag 582
            || |||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 1668 gtgtgtatggggccttctgatcctcaaccaaactggcatcttgggatgcgtggaacccag 1727

                                                  
Query: 583  catcgggcagtgatgtggagagcatggaaggagggtgg 620
            ||  ||||||||||||||||||  |||||||| |||||
Sbjct: 1728 cacagggcagtgatgtggagagtgtggaaggaaggtgg 1765



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                   
Query: 267  atgagccattgaatatggagcagtacgaagtgatctgcaacatctctaatgagtt 321
            |||||||| |||||||||| ||||| || || ||||||| |||||||||||||||
Sbjct: 1384 atgagccactgaatatggaacagtatgatgtaatctgcagcatctctaatgagtt 1438
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>dbj|AK103439.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129C21, full
            insert sequence
          Length = 2434

 Score =  361 bits (182), Expect = 2e-96
 Identities = 254/278 (91%)
 Strand = Plus / Plus

                                                                        
Query: 343  ccaagtggttctgaactggctccttctacgtttgaggcttttgcgaaagttccaaatgtt 402
            ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||
Sbjct: 1488 ccaagtggttctgaactggctccttctacatttgaggcctttgtgaaagttccaaatgtt 1547

                                                                        
Query: 403  ctacgtccgcatacacaaatcttttgcactagtgaatgggttcttggcacaagagaggac 462
            |||||||| ||||| || || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 1548 ctacgtccacatacgcagatattttgcacaagtgaatgggttcttggcacgagagaggac 1607

                                                                        
Query: 463  ttagtgaaggatattattgccgaactacgacctgaccttggtgaagagtggtggacatat 522
            || |||||||||||| |||| |||||||||||||| ||||||||||| ||||||||||||
Sbjct: 1608 ttggtgaaggatattgttgctgaactacgacctgatcttggtgaagaatggtggacatat 1667

                                                                        
Query: 523  gtttgtatgggcccttctgatcctcaaccaaattggcaccttgggatgcgcggaacccag 582
            || |||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 1668 gtgtgtatggggccttctgatcctcaaccaaactggcatcttgggatgcgtggaacccag 1727

                                                  
Query: 583  catcgggcagtgatgtggagagcatggaaggagggtgg 620
            ||  ||||||||||||||||||  |||||||| |||||
Sbjct: 1728 cacagggcagtgatgtggagagtgtggaaggaaggtgg 1765



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                   
Query: 267  atgagccattgaatatggagcagtacgaagtgatctgcaacatctctaatgagtt 321
            |||||||| |||||||||| ||||| || || ||||||| |||||||||||||||
Sbjct: 1384 atgagccactgaatatggaacagtatgatgtaatctgcagcatctctaatgagtt 1438
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>gb|AY109242.1| Zea mays PCO115415 mRNA sequence
          Length = 635

 Score =  143 bits (72), Expect = 8e-31
 Identities = 101/111 (90%)
 Strand = Plus / Plus

                                                                       
Query: 510 gtggtggacatatgtttgtatgggcccttctgatcctcaaccaaattggcaccttgggat 569
           ||||||||||||||| || ||||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 1   gtggtggacatatgtntgcatgggtccttctgatccccaaccaaactggcaccttgggat 60

                                                              
Query: 570 gcgcggaacccagcatcgggcagtgatgtggagagcatggaaggagggtgg 620
           ||| ||||||||||| |||||||||||||||||||  |||||||| |||||
Sbjct: 61  gcgtggaacccagcaccgggcagtgatgtggagagtgtggaaggaaggtgg 111
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  139 bits (70), Expect = 1e-29
 Identities = 100/110 (90%)
 Strand = Plus / Plus

                                                                            
Query: 511      tggtggacatatgtttgtatgggcccttctgatcctcaaccaaattggcaccttgggatg 570
                |||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 23480201 tggtggacatatgtgtgtatggggccttctgatcctcaaccaaactggcatcttgggatg 23480260

                                                                  
Query: 571      cgcggaacccagcatcgggcagtgatgtggagagcatggaaggagggtgg 620
                || |||||||||||  ||||||||||||||||||  |||||||| |||||
Sbjct: 23480261 cgtggaacccagcacagggcagtgatgtggagagtgtggaaggaaggtgg 23480310



 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Plus

                                                                            
Query: 343      ccaagtggttctgaactggctccttctacgtttgaggcttttgcgaaagttccaaatgtt 402
                ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||
Sbjct: 23478607 ccaagtggttctgaactggctccttctacatttgaggcctttgtgaaagttccaaatgtt 23478666

                                             
Query: 403      ctacgtccgcatacacaaatcttttgcac 431
                |||||||| ||||| || || ||||||||
Sbjct: 23478667 ctacgtccacatacgcagatattttgcac 23478695



 Score =  111 bits (56), Expect = 3e-21
 Identities = 71/76 (93%)
 Strand = Plus / Plus

                                                                            
Query: 433      agtgaatgggttcttggcacaagagaggacttagtgaaggatattattgccgaactacga 492
                |||||||||||||||||||| ||||||||||| |||||||||||| |||| |||||||||
Sbjct: 23479456 agtgaatgggttcttggcacgagagaggacttggtgaaggatattgttgctgaactacga 23479515

                                
Query: 493      cctgaccttggtgaag 508
                ||||| ||||||||||
Sbjct: 23479516 cctgatcttggtgaag 23479531



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 270      agccattgaatatggagcagtacgaagtgatctgcaacatctctaatgagtt 321
                ||||| |||||||||| ||||| || || ||||||| |||||||||||||||
Sbjct: 23478164 agccactgaatatggaacagtatgatgtaatctgcagcatctctaatgagtt 23478215
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>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1301_C12
          Length = 128396

 Score =  139 bits (70), Expect = 1e-29
 Identities = 100/110 (90%)
 Strand = Plus / Plus

                                                                         
Query: 511   tggtggacatatgtttgtatgggcccttctgatcctcaaccaaattggcaccttgggatg 570
             |||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 40594 tggtggacatatgtgtgtatggggccttctgatcctcaaccaaactggcatcttgggatg 40653

                                                               
Query: 571   cgcggaacccagcatcgggcagtgatgtggagagcatggaaggagggtgg 620
             || |||||||||||  ||||||||||||||||||  |||||||| |||||
Sbjct: 40654 cgtggaacccagcacagggcagtgatgtggagagtgtggaaggaaggtgg 40703



 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Plus

                                                                         
Query: 343   ccaagtggttctgaactggctccttctacgtttgaggcttttgcgaaagttccaaatgtt 402
             ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||
Sbjct: 39000 ccaagtggttctgaactggctccttctacatttgaggcctttgtgaaagttccaaatgtt 39059

                                          
Query: 403   ctacgtccgcatacacaaatcttttgcac 431
             |||||||| ||||| || || ||||||||
Sbjct: 39060 ctacgtccacatacgcagatattttgcac 39088



 Score =  111 bits (56), Expect = 3e-21
 Identities = 71/76 (93%)
 Strand = Plus / Plus

                                                                         
Query: 433   agtgaatgggttcttggcacaagagaggacttagtgaaggatattattgccgaactacga 492
             |||||||||||||||||||| ||||||||||| |||||||||||| |||| |||||||||
Sbjct: 39849 agtgaatgggttcttggcacgagagaggacttggtgaaggatattgttgctgaactacga 39908

                             
Query: 493   cctgaccttggtgaag 508
             ||||| ||||||||||
Sbjct: 39909 cctgatcttggtgaag 39924



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 270   agccattgaatatggagcagtacgaagtgatctgcaacatctctaatgagtt 321
             ||||| |||||||||| ||||| || || ||||||| |||||||||||||||
Sbjct: 38557 agccactgaatatggaacagtatgatgtaatctgcagcatctctaatgagtt 38608
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>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0453G03
          Length = 144480

 Score =  139 bits (70), Expect = 1e-29
 Identities = 100/110 (90%)
 Strand = Plus / Plus

                                                                          
Query: 511    tggtggacatatgtttgtatgggcccttctgatcctcaaccaaattggcaccttgggatg 570
              |||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct: 100098 tggtggacatatgtgtgtatggggccttctgatcctcaaccaaactggcatcttgggatg 100157

                                                                
Query: 571    cgcggaacccagcatcgggcagtgatgtggagagcatggaaggagggtgg 620
              || |||||||||||  ||||||||||||||||||  |||||||| |||||
Sbjct: 100158 cgtggaacccagcacagggcagtgatgtggagagtgtggaaggaaggtgg 100207



 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Plus

                                                                         
Query: 343   ccaagtggttctgaactggctccttctacgtttgaggcttttgcgaaagttccaaatgtt 402
             ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||
Sbjct: 98504 ccaagtggttctgaactggctccttctacatttgaggcctttgtgaaagttccaaatgtt 98563

                                          
Query: 403   ctacgtccgcatacacaaatcttttgcac 431
             |||||||| ||||| || || ||||||||
Sbjct: 98564 ctacgtccacatacgcagatattttgcac 98592



 Score =  111 bits (56), Expect = 3e-21
 Identities = 71/76 (93%)
 Strand = Plus / Plus

                                                                         
Query: 433   agtgaatgggttcttggcacaagagaggacttagtgaaggatattattgccgaactacga 492
             |||||||||||||||||||| ||||||||||| |||||||||||| |||| |||||||||
Sbjct: 99353 agtgaatgggttcttggcacgagagaggacttggtgaaggatattgttgctgaactacga 99412

                             
Query: 493   cctgaccttggtgaag 508
             ||||| ||||||||||
Sbjct: 99413 cctgatcttggtgaag 99428



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 270   agccattgaatatggagcagtacgaagtgatctgcaacatctctaatgagtt 321
             ||||| |||||||||| ||||| || || ||||||| |||||||||||||||
Sbjct: 98061 agccactgaatatggaacagtatgatgtaatctgcagcatctctaatgagtt 98112
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>dbj|AK061656.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D02, full
           insert sequence
          Length = 578

 Score =  119 bits (60), Expect = 1e-23
 Identities = 90/100 (90%)
 Strand = Plus / Plus

                                                                       
Query: 521 atgtttgtatgggcccttctgatcctcaaccaaattggcaccttgggatgcgcggaaccc 580
           |||| |||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||
Sbjct: 1   atgtgtgtatggggccttctgatcctcaaccaaactggcatcttgggatgcgtggaaccc 60

                                                   
Query: 581 agcatcgggcagtgatgtggagagcatggaaggagggtgg 620
           ||||  ||||||||||||||||||  |||||||| |||||
Sbjct: 61  agcacagggcagtgatgtggagagtgtggaaggaaggtgg 100
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>dbj|AP007299.1| Lotus japonicus genomic DNA, clone:LjT30I08, TM0492, complete sequence
          Length = 106844

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 94/112 (83%)
 Strand = Plus / Minus

                                                                         
Query: 511   tggtggacatatgtttgtatgggcccttctgatcctcaaccaaattggcaccttgggatg 570
             |||||||||||||| ||||| || ||||| |||||||| ||||||||||| ||||| |||
Sbjct: 56231 tggtggacatatgtatgtataggaccttcagatcctcatccaaattggcatcttggaatg 56172

                                                                 
Query: 571   cgcggaacccagcatcgggcagtgatgtggagagcatggaaggagggtggca 622
             || || || || ||||| || || |||||| | | |||||| ||||||||||
Sbjct: 56171 cgaggcactcaacatcgtgctgtcatgtggcgcgtatggaaagagggtggca 56120
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>ref|NM_103589.3| Arabidopsis thaliana unknown protein AT1G45150 mRNA, complete cds
          Length = 2215

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                        
Query: 535  ccttctgatcctcaaccaaattggcaccttgggatgcgcggaacccagcatcgggcagtg 594
            ||||| |||||||| ||||||||||| || |||||||| || || ||||| |||||||||
Sbjct: 1614 ccttcagatcctcacccaaattggcatctggggatgcgtggtacacagcaacgggcagtg 1673

                  
Query: 595  atgtgg 600
            ||||||
Sbjct: 1674 atgtgg 1679
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>gb|BT008320.1| Arabidopsis thaliana At1g45150 gene, complete cds
          Length = 1932

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                        
Query: 535  ccttctgatcctcaaccaaattggcaccttgggatgcgcggaacccagcatcgggcagtg 594
            ||||| |||||||| ||||||||||| || |||||||| || || ||||| |||||||||
Sbjct: 1498 ccttcagatcctcacccaaattggcatctggggatgcgtggtacacagcaacgggcagtg 1557

                  
Query: 595  atgtgg 600
            ||||||
Sbjct: 1558 atgtgg 1563
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>gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana BAC F27F5 from chromosome I,
              complete sequence
          Length = 137336

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                          
Query: 535    ccttctgatcctcaaccaaattggcaccttgggatgcgcggaacccagcatcgggcagtg 594
              ||||| |||||||| ||||||||||| || |||||||| || || ||||| |||||||||
Sbjct: 104165 ccttcagatcctcacccaaattggcatctggggatgcgtggtacacagcaacgggcagtg 104106

                    
Query: 595    atgtgg 600
              ||||||
Sbjct: 104105 atgtgg 104100
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>emb|BX815785.1|CNS0AE0H Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS94ZF07 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2197

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 535  ccttctgatcctcaaccaaattggcaccttgggatgcgcggaacccagcatcgggcagtg 594
            ||||| |||||||| ||||||||||| || |||||||| || || ||||| |||||||||
Sbjct: 1597 ccttcagatcctcacccaaattggcatctggggatgcgtggtacacagcaacgggcagtg 1656

              
Query: 595  at 596
            ||
Sbjct: 1657 at 1658
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>emb|AL773519.5| Mouse DNA sequence from clone RP23-42C15 on chromosome 4 Contains
              mitochondrial NADH dehydrogenase 5 and 6 (mt-Nd5, mt-Nd6)
              pseudogenes and a mitochondrial cytochrome b (Cytb)
              pseudogene, complete sequence
          Length = 204189

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 338    gatgtccaagtggttctgaactg 360
              |||||||||||||||||||||||
Sbjct: 168739 gatgtccaagtggttctgaactg 168717
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>emb|AL591363.4| Human DNA sequence from clone RP11-45P22 on chromosome 10 Contains a
             peptidylprolyl isomerase A (cyclophilin A) (CYPA, CYPH)
             (PPIA) pseudogene and a tyrosine
             3-monooxygenase/tryptophan 5-monooxygenase activation
             protein, zeta polypeptide (KCIP-1) (YWHAZ) pseudogene,
             complete sequence
          Length = 115806

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 179   tttgttctatgtgagttgtgag 200
             ||||||||||||||||||||||
Sbjct: 66166 tttgttctatgtgagttgtgag 66187
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>gb|AC154205.1| Mus musculus BAC clone RP24-88I1 from chromosome 14, complete sequence
          Length = 219623

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 6     tgatgccaatgcaacatgtcaaagaa 31
             |||||| |||||||||||||||||||
Sbjct: 84078 tgatgcaaatgcaacatgtcaaagaa 84053
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>gb|AC102240.12| Mus musculus chromosome 18, clone RP24-122C12, complete sequence
          Length = 172481

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 153    ttcttgagaaaactgtatatt 173
              |||||||||||||||||||||
Sbjct: 147721 ttcttgagaaaactgtatatt 147741
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>gb|AC157910.4| Mus musculus chromosome 18, clone RP24-372A6, complete sequence
          Length = 180725

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 153   ttcttgagaaaactgtatatt 173
             |||||||||||||||||||||
Sbjct: 74155 ttcttgagaaaactgtatatt 74175
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>emb|AL158089.8| Human DNA sequence from clone RP3-487D22 on chromosome 20 Contains
            STSs and GSSs, complete sequence
          Length = 20074

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 13   aatgcaacatgtcaaagaaca 33
            |||||||||||||||||||||
Sbjct: 4256 aatgcaacatgtcaaagaaca 4276
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>emb|AL603907.12| Mouse DNA sequence from clone RP23-139D10 on chromosome 11 Contains a
              novel gene, complete sequence
          Length = 226006

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 188    tgtgagttgtgagtgtagcct 208
              |||||||||||||||||||||
Sbjct: 195523 tgtgagttgtgagtgtagcct 195503
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>emb|CR388144.17| Zebrafish DNA sequence from clone DKEY-21I17 in linkage group 14,
             complete sequence
          Length = 211706

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 166   tgtatattgacggtttgttct 186
             |||||||||||||||||||||
Sbjct: 85467 tgtatattgacggtttgttct 85447
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>emb|CR361554.35| Zebrafish DNA sequence from clone CH211-222L15 in linkage group 6,
              complete sequence
          Length = 187638

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 166    tgtatattgacggtttgttct 186
              |||||||||||||||||||||
Sbjct: 162041 tgtatattgacggtttgttct 162021
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>gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, complete sequence
          Length = 173643

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    actgctgactgttgagctaa 82
             ||||||||||||||||||||
Sbjct: 90804 actgctgactgttgagctaa 90823
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>ref|NM_008482.1| Mus musculus laminin B1 subunit 1 (Lamb1-1), mRNA
          Length = 5689

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 582  gcatcgggcagtgatgtggagagc 605
            |||||||||||||| |||||||||
Sbjct: 2242 gcatcgggcagtgacgtggagagc 2265
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>emb|CR381650.15| Zebrafish DNA sequence from clone CH211-129F24 in linkage group 7,
             complete sequence
          Length = 137625

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    aatccttccttaattggttc 100
             ||||||||||||||||||||
Sbjct: 65817 aatccttccttaattggttc 65836
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>emb|AL513344.15| Human DNA sequence from clone RP11-71D4 on chromosome 1 Contains the 5'
             end of the NPL gene for N-acetylneuraminate pyruvate lyase
             (dihydrodipicolinate synthase) and a CpG island, complete
             sequence
          Length = 71464

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 379   gcttttgcgaaagttccaaatgtt 402
             |||||||||||| |||||||||||
Sbjct: 39304 gcttttgcgaaatttccaaatgtt 39281
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>emb|AL929198.3| Zebrafish DNA sequence from clone BUSM1-112P11 in linkage group 7,
             complete sequence
          Length = 81630

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    aatccttccttaattggttc 100
             ||||||||||||||||||||
Sbjct: 39045 aatccttccttaattggttc 39026
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>dbj|AK143079.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130012C20 product:laminin B1 subunit 1,
            full insert sequence
          Length = 4370

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 582  gcatcgggcagtgatgtggagagc 605
            |||||||||||||| |||||||||
Sbjct: 2341 gcatcgggcagtgacgtggagagc 2364
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>dbj|AK147313.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1012G13 product:laminin B1 subunit 1, full
            insert sequence
          Length = 5777

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 582  gcatcgggcagtgatgtggagagc 605
            |||||||||||||| |||||||||
Sbjct: 2335 gcatcgggcagtgacgtggagagc 2358
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>ref|XM_687179.1| PREDICTED: Danio rerio similar to chromosome 17 open reading frame 27
            (LOC563816), mRNA
          Length = 8889

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 132  tatgctcctaggatatcctgattcttgagaaa 163
            ||||||||| |||| || ||||||||||||||
Sbjct: 4970 tatgctcctcggatgtcatgattcttgagaaa 5001
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>gb|AF176315.2|AF176315 Homo sapiens chromosome 3 clone RP11-83M12 map 3p, complete sequence
          Length = 170755

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 590   cagtgatgtggagagcatgg 609
             ||||||||||||||||||||
Sbjct: 37784 cagtgatgtggagagcatgg 37803
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>gb|AC126943.5| Mus musculus BAC clone RP23-307F3 from chromosome 10, complete sequence
          Length = 192356

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    aacatctctaatgagttaag 324
              ||||||||||||||||||||
Sbjct: 121122 aacatctctaatgagttaag 121141
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>gb|AC008151.1| Homo sapiens 3 BAC CITB-243A6 (California Institute of Technology BAC
             Library) complete sequence
          Length = 178242

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 590   cagtgatgtggagagcatgg 609
             ||||||||||||||||||||
Sbjct: 37501 cagtgatgtggagagcatgg 37482
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>emb|CR974423.21| Mouse DNA sequence from clone RP23-182F9 on chromosome 12, complete
              sequence
          Length = 238441

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 582    gcatcgggcagtgatgtggagagc 605
              |||||||||||||| |||||||||
Sbjct: 222366 gcatcgggcagtgacgtggagagc 222343
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>emb|BX294167.5| Zebrafish DNA sequence from clone CH211-244O18 in linkage group 5,
              complete sequence
          Length = 191302

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 165    ctgtatattgacggtttgttctat 188
              ||||||||||| ||||||||||||
Sbjct: 183517 ctgtatattgaaggtttgttctat 183494
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>emb|BX001015.5| Zebrafish DNA sequence from clone CH211-261D18 in linkage group 7,
             complete sequence
          Length = 150217

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    aatccttccttaattggttc 100
             ||||||||||||||||||||
Sbjct: 76395 aatccttccttaattggttc 76376
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>gb|AC147256.3| Mus musculus BAC clone RP24-147G24 from 12, complete sequence
          Length = 170987

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    actgctgactgttgagctaa 82
             ||||||||||||||||||||
Sbjct: 18405 actgctgactgttgagctaa 18386
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>emb|AL953879.7| Zebrafish DNA sequence from clone CH211-151G18, complete sequence
          Length = 142739

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 132   tatgctcctaggatatcctgattcttgagaaa 163
             ||||||||| |||| || ||||||||||||||
Sbjct: 44848 tatgctcctcggatgtcatgattcttgagaaa 44817
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>emb|CR759836.11| Zebrafish DNA sequence from clone CH211-254B14 in linkage group 3,
             complete sequence
          Length = 168413

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 132   tatgctcctaggatatcctgattcttgagaaa 163
             ||||||||| |||| || ||||||||||||||
Sbjct: 60463 tatgctcctcggatgtcatgattcttgagaaa 60432
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 451    acaagagaggacttagtgaa 470
              ||||||||||||||||||||
Sbjct: 726996 acaagagaggacttagtgaa 726977
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>gb|M15525.1|MUSLAMB1A Mouse laminin B1 mRNA, complete cds
          Length = 5689

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 582  gcatcgggcagtgatgtggagagc 605
            |||||||||||||| |||||||||
Sbjct: 2242 gcatcgggcagtgacgtggagagc 2265
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>gb|AC068312.5| Homo sapiens chromosome 3 clone RP11-128A5 map 3p, complete sequence
          Length = 170350

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 590   cagtgatgtggagagcatgg 609
             ||||||||||||||||||||
Sbjct: 92349 cagtgatgtggagagcatgg 92330


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,765,254
Number of Sequences: 3902068
Number of extensions: 4765254
Number of successful extensions: 82050
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81937
Number of HSP's gapped (non-prelim): 113
length of query: 622
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 599
effective length of database: 17,143,297,704
effective search space: 10268835324696
effective search space used: 10268835324696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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