ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak4c22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TL26_ARATH (P82538) Thylakoid lumenal 25.6 kDa protein, chloropl... 129 5e-30
2TL215_ARATH (O23403) Thylakoid lumenal 21.5 kDa protein, chlorop... 45 2e-04
3PSBP_NARPS (Q40407) Oxygen-evolving enhancer protein 2, chloropl... 41 0.002
4PSBP_CUCSA (Q9SLQ8) Oxygen-evolving enhancer protein 2, chloropl... 40 0.004
5PSBP1_ARATH (Q42029) Oxygen-evolving enhancer protein 2-1, chlor... 39 0.008
6PSBP3_TOBAC (Q04127) Oxygen-evolving enhancer protein 2-3, chlor... 38 0.019
7PSBP2_TOBAC (P18212) Oxygen-evolving enhancer protein 2-2, chlor... 37 0.032
8TL30_ARATH (O49292) Thylakoid lumenal 29.8 kDa protein, chloropl... 37 0.042
9TL19_ARATH (P82658) Thylakoid lumenal 19 kDa protein, chloroplas... 36 0.071
10PSBP_CHLRE (P11471) Oxygen-evolving enhancer protein 2, chloropl... 35 0.12
11PSBP2_ARATH (O49344) Oxygen-evolving enhancer protein 2-2, chlor... 35 0.12
12YTBQ_BACSU (P53560) Hypothetical protein ytbQ 32 0.79
13YNL5_CAEEL (Q21955) Hypothetical protein R12B2.5 31 1.8
14RSP7_CAEEL (O01159) Probable splicing factor, arginine/serine-ri... 31 1.8
15SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1 30 3.9
16CG117_HUMAN (Q9Y3C1) Protein CGI-117 30 3.9
17BIR1F_MOUSE (Q9JIB6) Baculoviral IAP repeat-containing protein 1... 29 6.7
18BIR1G_MOUSE (Q9JIB3) Baculoviral IAP repeat-containing protein 1... 29 6.7
19PERT_PIG (P09933) Thyroid peroxidase precursor (EC 1.11.1.8) (TPO) 29 8.7
20FZD8_HUMAN (Q9H461) Frizzled 8 precursor (Frizzled-8) (Fz-8) (hFz8) 29 8.7
21PNCB_NEIMB (Q9JYM9) Nicotinate phosphoribosyltransferase (EC 2.4... 29 8.7
22JHD1_EMENI (Q5AW75) JmjC domain-containing histone demethylation... 29 8.7
23PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakar... 29 8.7

>TL26_ARATH (P82538) Thylakoid lumenal 25.6 kDa protein, chloroplast precursor|
          Length = 230

 Score =  129 bits (324), Expect = 5e-30
 Identities = 61/158 (38%), Positives = 92/158 (58%)
 Frame = +2

Query: 14  AYAEEVPKNYRSYVDANDGYSYLYPADWRDFDFLGHDSAFKDRNVQLQSVRVAFIPTQKT 193
           ++A E  K + +  D  D Y++LYP  W++    G D  +KD    L+SV V  +PT K 
Sbjct: 72  SFAAESKKGFLAVSDNKDAYAFLYPFGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQ 131

Query: 194 DIRDLGPMDEAIFNLVNEVYAAPNQIPTIYEMQERTVDGRNYWTFEYDLEAPGYGVSAFA 373
            I++ GP  +    L+ +V A PNQ  T+ +  E  VDG+ Y+ FE+ ++A  Y   A  
Sbjct: 132 TIKEFGPPKQIAETLIKKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALG 191

Query: 374 TIAIGNGRYYTLIVTANERRWSRLRNKLKVVADSFKIS 487
           TI + NG +YTL   ANERRW +++++L  V DSFKI+
Sbjct: 192 TITVFNGNFYTLTTGANERRWEKMKDRLHTVVDSFKIT 229



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>TL215_ARATH (O23403) Thylakoid lumenal 21.5 kDa protein, chloroplast precursor|
          Length = 287

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 28/179 (15%)
 Frame = +2

Query: 41  YRSYVDANDGYSYLYPADWRDFDFLGHDSAFKDRNVQLQSVRVAF---IPTQKTDIRDLG 211
           +R Y+D  DGYS+ YP +W      G D  F+D  V  +++ V F     +  T + DLG
Sbjct: 109 FREYIDTFDGYSFKYPQNWIQVRGAGADIFFRDPVVLDENLSVEFSSPSSSNYTSLEDLG 168

Query: 212 PMDEA--------IFNLVNEVYAAPNQIPTIYEMQERTVDGRNYWTFEYDLEAPG----- 352
             +E         +   ++       Q   +        DG+ Y+  E ++++       
Sbjct: 169 SPEEVGKRVLRQYLTEFMSTRLGVKRQANILSTSSRVADDGKLYYQVEVNIKSYANNNEL 228

Query: 353 ------------YGVSAFATIAIGNGRYYTLIVTANERRWSRLRNKLKVVADSFKISDL 493
                       +     A + + N R Y++ +   E+ +      L+ V DSF++  +
Sbjct: 229 AVMPQDRVARLEWNRRYLAVLGVENDRLYSIRLQTPEKVFLEEEKDLRRVMDSFRVEKI 287



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>PSBP_NARPS (Q40407) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 265

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 22/160 (13%)
 Frame = +2

Query: 65  DGYSYLYPADW---RDFDFLGHDSAFKDRNVQLQSVRVAFIPTQKTDIRDLGPMDEAIFN 235
           DG+  L P+ W   ++ +F G    ++D      +V V   PT K  I+D G  ++ +  
Sbjct: 103 DGFKILIPSKWNPSKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDKKSIKDYGSPEQFLSQ 162

Query: 236 L-------------VNEVYAAPNQIPT--IYEMQERTVDGRNYWTFEY---DLEAPGYGV 361
           +             ++E    PN + T  I E     V G++Y++        +    G 
Sbjct: 163 VDYLLGKQAYFGKTISEGGFEPNAVRTANILETSTPVVGGKDYYSIHVLTRTADGDEGGK 222

Query: 362 SAFATIAIGNGRYYTLIVTANERRWSRLRNK-LKVVADSF 478
               T  + +G+ Y     A ++RW +   K ++  A SF
Sbjct: 223 HLLITATVSDGKLYICKAQAGDKRWFKGAKKFVESAASSF 262



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>PSBP_CUCSA (Q9SLQ8) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein) (OEC23)
          Length = 263

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 23/175 (13%)
 Frame = +2

Query: 32  PKNYRSYVD-ANDGYSYLYPADW---RDFDFLGHDSAFKDRNVQLQSVRVAFIPTQKTDI 199
           PK+   Y+  + DG+    P+ W   ++ +F G    ++D      ++ V   PT K  I
Sbjct: 89  PKSNTDYLPYSGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSNLSVIINPTDKKSI 148

Query: 200 RDLGPMDEAI----FNLVNEVYAA---------PNQIPT--IYEMQERTVDGRNYW---T 325
           +D G  +E +    + L  + Y           P+ + T  I E     V+G++Y+    
Sbjct: 149 KDFGSPEEFLSKVDYLLGKQAYFGKTASEGGFDPDAVATANILEATASNVNGKDYYFVSV 208

Query: 326 FEYDLEAPGYGVSAFATIAIGNGRYYTLIVTANERRWSR-LRNKLKVVADSFKIS 487
                +    G     T  + +G+ Y     A ++RW +  R  ++  A SF ++
Sbjct: 209 LTRTADGDEGGKHQLITATVNDGKLYICKAQAGDKRWFKGARKFVEGAASSFSVA 263



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>PSBP1_ARATH (Q42029) Oxygen-evolving enhancer protein 2-1, chloroplast|
           precursor (OEE2) (23 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 23 kDa subunit) (23 kDa
           thylakoid membrane protein)
          Length = 263

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 39/175 (22%), Positives = 67/175 (38%), Gaps = 23/175 (13%)
 Frame = +2

Query: 32  PKNYRSYVDAN-DGYSYLYPADW---RDFDFLGHDSAFKDRNVQLQSVRVAFIPTQKTDI 199
           PK    ++  N DG+    PA W   ++ ++ G    F+D      ++ V   PT K  I
Sbjct: 89  PKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPTDKKSI 148

Query: 200 RDLGPMDEAI----FNLVNEVYAAP---------NQIPT--IYEMQERTVDGRNYW---T 325
            D G  +E +    + L  + Y            N + T  I E   + V G+ Y+    
Sbjct: 149 TDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILESSSQEVGGKPYYYLSV 208

Query: 326 FEYDLEAPGYGVSAFATIAIGNGRYYTLIVTANERRWSR-LRNKLKVVADSFKIS 487
                +    G     T  +  G+ Y     A ++RW +  R  ++  A SF ++
Sbjct: 209 LTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGARKFVESAATSFSVA 263



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>PSBP3_TOBAC (Q04127) Oxygen-evolving enhancer protein 2-3, chloroplast|
           precursor (OEE2) (23 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 23 kDa subunit) (23 kDa
           thylakoid membrane)
          Length = 266

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 22/163 (13%)
 Frame = +2

Query: 65  DGYSYLYPADW---RDFDFLGHDSAFKDRNVQLQSVRVAFIPTQKTDIRDLGPMDEAI-- 229
           DG+    P+ W   ++ ++ G    F+D      +V VA  PT K  I D G  ++ +  
Sbjct: 104 DGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQ 163

Query: 230 --FNLVNEVYAAPNQ-----------IPTIYEMQERTVDGRNYWTFEY---DLEAPGYGV 361
             + L  + Y+               I  + E     V G+ Y+         +    G 
Sbjct: 164 VDYLLGRQAYSGKTDSEGGFESDAVAIANVLETSTAEVGGKQYYYLSILTRTADGNEGGK 223

Query: 362 SAFATIAIGNGRYYTLIVTANERRWSRLRNK-LKVVADSFKIS 487
               T  + +G+ Y     A ++RW +   K ++  A SF ++
Sbjct: 224 HQLVTATVNDGKLYICKAQAGDKRWFKGAKKFVENTATSFSLA 266



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>PSBP2_TOBAC (P18212) Oxygen-evolving enhancer protein 2-2, chloroplast|
           precursor (OEE2) (23 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 23 kDa subunit) (23 kDa
           thylakoid membrane)
          Length = 265

 Score = 37.0 bits (84), Expect = 0.032
 Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 22/163 (13%)
 Frame = +2

Query: 65  DGYSYLYPADW---RDFDFLGHDSAFKDRNVQLQSVRVAFIPTQKTDIRDLGPMDEAI-- 229
           DG+    P+ W   ++ ++ G    F+D      +V VA  PT K  I D G  ++ +  
Sbjct: 103 DGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQ 162

Query: 230 --FNLVNEVYAAPNQ-----------IPTIYEMQERTVDGRNYW---TFEYDLEAPGYGV 361
             + L  + Y+               I  + E     V G+ Y+         +    G 
Sbjct: 163 VDYLLGRQAYSGKTDSEGGFESDAVAIANVLETSSAEVGGKPYYYLSVLTRTADGNEGGK 222

Query: 362 SAFATIAIGNGRYYTLIVTANERRWSRLRNK-LKVVADSFKIS 487
               T  + +G+ Y     A ++RW +   K ++  A SF ++
Sbjct: 223 HQLITATVNDGKLYICKAQAGDKRWFKGAKKFVENTATSFSLA 265



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>TL30_ARATH (O49292) Thylakoid lumenal 29.8 kDa protein, chloroplast precursor|
          Length = 274

 Score = 36.6 bits (83), Expect = 0.042
 Identities = 26/60 (43%), Positives = 32/60 (53%)
 Frame = +2

Query: 305 DGRNYWTFEYDLEAPGYGVSAFATIAIGNGRYYTLIVTANERRWSRLRNKLKVVADSFKI 484
           DGR Y+ FE  LE P   ++A A    GN R Y   VT N  +W R    LK +A SF+I
Sbjct: 220 DGRLYYQFE--LEPPHVLITATAA---GN-RLYLFSVTGNGLQWKRHYKDLKRIASSFRI 273



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>TL19_ARATH (P82658) Thylakoid lumenal 19 kDa protein, chloroplast precursor|
           (P19)
          Length = 229

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 18/166 (10%)
 Frame = +2

Query: 38  NYRSYVDANDG-----YSYLYPADWRDF-------DFLGHDSAFKDRNVQLQSVRVAFIP 181
           NY  Y   +D      Y Y  P  W++           G DS F +   + +   + F+ 
Sbjct: 70  NYGGYGGNSDRKTSAEYVYDVPEGWKERLVSKVEKGTNGTDSEFYNPKKKTEKEYLTFL- 128

Query: 182 TQKTDIRDLGPMDEAIFNL------VNEVYAAPNQIPTIYEMQERTVDGRNYWTFEYDLE 343
                 R L P D  + NL      + ++ A  +++ +  E ++ T  G+ Y+ +E D  
Sbjct: 129 ---AGFRQLAPRDVILNNLALSDVELQDLIAGADKVVS-EERKDET--GQVYYLYEID-- 180

Query: 344 APGYGVSAFATIAIGNGRYYTLIVTANERRWSRLRNKLKVVADSFK 481
             G G  +  T+     R Y   V A    W+R  + L  + DSFK
Sbjct: 181 --GVGKHSLITVTCSKNRLYAHFVNAPAPEWNRDHDTLTHLRDSFK 224



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>PSBP_CHLRE (P11471) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2)
          Length = 245

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 25/167 (14%)
 Frame = +2

Query: 59  ANDGYSYLYPADW---RDFDFLGHDSAFKDRNVQLQSVRVAFIPTQKTDIRDLGPMDEAI 229
           A DG++ L PA W   ++ DF G    ++D    + ++ V    T K  I D G  D+ +
Sbjct: 79  AGDGFALLLPAKWNPSKENDFPGVILRYEDNFDAVNNLVVIAQDTDKKAIADFGSQDKFL 138

Query: 230 ----FNLVNEVYA---------APNQIPTIYEMQERTV---DGRNYWTFEY-----DLEA 346
               + L  + Y+         APN++     +   T     G+ Y+ +E      D + 
Sbjct: 139 ESVSYLLGKQAYSGETQSEGGFAPNRVSAASLLDVSTTTDKKGKTYYKYELLVRSADGDE 198

Query: 347 PGYGVSAFATIAIGNGRYYTLIVTANERRWSRLRNKLKVVA-DSFKI 484
            G      AT+   N + Y + +   ++RW +   K  + A DSF +
Sbjct: 199 GGRHQLIGATVGSDN-KLYIIKIQIGDKRWFKGAKKEAMGAFDSFTV 244



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>PSBP2_ARATH (O49344) Oxygen-evolving enhancer protein 2-2, chloroplast|
           precursor (OEE2) (23 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 23 kDa subunit) (23 kDa
           thylakoid membrane protein)
          Length = 265

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 22/163 (13%)
 Frame = +2

Query: 65  DGYSYLYPADW---RDFDFLGHDSAFKDRNVQLQSVRVAFIPTQKTDIRDLGPMDEAI-- 229
           +G+    P+ W   ++ ++ G    F+D      +V V   PT K  I D G  ++ +  
Sbjct: 103 EGFKIQIPSKWNPSKEIEYPGQVLRFEDNFDATSNVSVMITPTDKKSITDYGSPEQFLSQ 162

Query: 230 --FNLVNEVYAA---------PNQIPT--IYEMQERTVDGRNYW---TFEYDLEAPGYGV 361
             + L  + Y            N + T  I E   + + G+ Y+         +    G 
Sbjct: 163 VNYLLGKQAYVGETASEGGFDANAVATANILETSTQEIGGKEYYYLSVLTRTADGDEGGK 222

Query: 362 SAFATIAIGNGRYYTLIVTANERRWSR-LRNKLKVVADSFKIS 487
               T  +  G+ Y     A ++RW +  R  ++  A SF ++
Sbjct: 223 HQLITATVNGGKLYICKAQAGDKRWFKGARKFVENAATSFSVA 265



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>YTBQ_BACSU (P53560) Hypothetical protein ytbQ|
          Length = 253

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 22/73 (30%), Positives = 32/73 (43%)
 Frame = +2

Query: 248 VYAAPNQIPTIYEMQERTVDGRNYWTFEYDLEAPGYGVSAFATIAIGNGRYYTLIVTANE 427
           V+A+ N +  +YE   R++ GR   T +Y L    YGV    +  IG+  Y         
Sbjct: 108 VFASSNHVTDVYEKDGRSLLGREITTSDYPLSKNLYGVLKLTSEQIGHLFY--------- 158

Query: 428 RRWSRLRNKLKVV 466
                L NKL V+
Sbjct: 159 -----LENKLSVI 166



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>YNL5_CAEEL (Q21955) Hypothetical protein R12B2.5|
          Length = 780

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -3

Query: 368 TPRRRSPAPPDRTQTSSSSCHPPCALAFHRSSVSGS 261
           TP  R+P PPD   TS+ + +PP  +A  ++S + S
Sbjct: 104 TPGYRAPVPPDPQPTSAQARNPPVTVATTQASTTPS 139



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>RSP7_CAEEL (O01159) Probable splicing factor, arginine/serine-rich 7 (p54)|
          Length = 452

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
 Frame = +2

Query: 131 FKDRNVQLQSVRVAFI-PTQKTDIRDLGPMDEAI 229
           FK+R +++Q  RVA I P  KTD + LG ++EAI
Sbjct: 228 FKERPLKIQHSRVAIIKPQAKTDEQALGEIEEAI 261



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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -3

Query: 380 RSSQTPRRRSPAPPDRTQTSSSSCHPP 300
           RS   PRRRSP+PP R ++ S   + P
Sbjct: 565 RSPSLPRRRSPSPPPRRRSPSPRRYSP 591



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>CG117_HUMAN (Q9Y3C1) Protein CGI-117|
          Length = 178

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 17  YAEEVPKNYRSYVDANDGYSYLYPADWRDF 106
           Y ++ PK  RS ++    Y   YPA+W+DF
Sbjct: 140 YYQDTPKQIRSKINV---YKRFYPAEWQDF 166



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>BIR1F_MOUSE (Q9JIB6) Baculoviral IAP repeat-containing protein 1f (Neuronal|
            apoptosis inhibitory protein 6)
          Length = 1403

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
 Frame = +2

Query: 14   AYAEEVPKNY-----RSYVDANDGYSYLYPADWRDFDFLGHDSAFKDRNVQLQSVRVAFI 178
            A  EE+ KNY     R+  D ++GY  L P   +                         I
Sbjct: 965  AQDEEIIKNYENIWPRALPDISEGYWNLSPKPCK-------------------------I 999

Query: 179  PTQKTDIRDLGPMDEAIFNLVNEVYAAPNQI 271
            P  +  + ++GP D+A+  ++ EV++A   I
Sbjct: 1000 PKLEVQVNNMGPADQALLQVLMEVFSASQSI 1030



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>BIR1G_MOUSE (Q9JIB3) Baculoviral IAP repeat-containing protein 1g (Neuronal|
            apoptosis inhibitory protein 7)
          Length = 1402

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
 Frame = +2

Query: 14   AYAEEVPKNY-----RSYVDANDGYSYLYPADWRDFDFLGHDSAFKDRNVQLQSVRVAFI 178
            A  EE+ KNY     R+  D ++GY  L P   +                         I
Sbjct: 965  AQDEEIIKNYENIWPRALPDISEGYWNLSPKPCK-------------------------I 999

Query: 179  PTQKTDIRDLGPMDEAIFNLVNEVYAAPNQI 271
            P  +  + ++GP D+A+  ++ EV++A   I
Sbjct: 1000 PKLEVQVNNMGPADQALLQVLMEVFSASQSI 1030



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>PERT_PIG (P09933) Thyroid peroxidase precursor (EC 1.11.1.8) (TPO)|
          Length = 926

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -3

Query: 368 TPRRRSPAPPDRTQTSSSSCHPPCALAFHRSSVS-GSGQRTLRLPN*RWPHP 216
           T   RSP  P +  T++S       L F+RSS + GSG++   + N  W  P
Sbjct: 262 TCENRSPCFPIQLPTNASGAAGATCLPFYRSSAACGSGRQGALVGNLSWAAP 313



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>FZD8_HUMAN (Q9H461) Frizzled 8 precursor (Frizzled-8) (Fz-8) (hFz8)|
          Length = 694

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -3

Query: 377 SSQTPRRRSPAPPDRTQTSSSSCH--PPCALAFHRSSVSGSG 258
           ++ +P RR P PP   Q  S S H  PP A   HR    G G
Sbjct: 159 AAPSPPRRLPPPPPGEQPPSGSGHGRPPGARPPHRGGGRGGG 200



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>PNCB_NEIMB (Q9JYM9) Nicotinate phosphoribosyltransferase (EC 2.4.2.11)|
           (NAPRTase)
          Length = 402

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
 Frame = +2

Query: 62  NDGYSYLYPADWRDFDFLGHDSAFKDRNVQLQSVRVAFIPTQKTDIRDLGPMDEAIF--- 232
           +D   YL    +   DF+ +   F+   +Q + V +      + +IR  GPM +A+F   
Sbjct: 67  HDELGYLRSLRFIKSDFVDYLELFQ---LQRRFVEIGTDDKDRLNIRIEGPMIQAMFFEI 123

Query: 233 ---NLVNEVYAAPNQIPTIYEMQERTVDGR 313
               +VNE+Y    + P + E  ER +  +
Sbjct: 124 FILAIVNELYFRRLETPAVIEEGERRLQAK 153



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>JHD1_EMENI (Q5AW75) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 1407

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
 Frame = -3

Query: 374 SQTPRRRSPAPPDRTQTSSSSCHPPCALAFHRS-------SVSGSGQRTLRLPN*RWPHP 216
           S+ PR R+P+PP R     S    PC+ A +R+       S S +       P  + P P
Sbjct: 13  SRPPRYRTPSPPRRAVEPIS----PCSTADYRTYRASREISASATSDHVRSTPTDKRPSP 68

Query: 215 SDL 207
           +D+
Sbjct: 69  ADV 71



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>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte|
            stimulating factor) (Superficial zone proteoglycan)
            [Contains: Proteoglycan-4 C-terminal part]
          Length = 1404

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 5/71 (7%)
 Frame = +2

Query: 239  VNEVYAAPNQIPTIY-----EMQERTVDGRNYWTFEYDLEAPGYGVSAFATIAIGNGRYY 403
            + EV+  P+ I T++     E +        YW F  D++  GY    F       G+  
Sbjct: 1185 ITEVWGIPSPIDTVFTRCNCEGKTFFFKDSQYWRFTNDIKDAGYPKPIFKGFGGLTGQIV 1244

Query: 404  TLIVTANERRW 436
              + TA  + W
Sbjct: 1245 AALSTAKYKNW 1255


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,321,471
Number of Sequences: 219361
Number of extensions: 1483787
Number of successful extensions: 4408
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4392
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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