Clone Name | baak4c13 |
---|---|
Clone Library Name | barley_pub |
>gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 Score = 763 bits (385), Expect = 0.0 Identities = 385/385 (100%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 931 ggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgtt 990 Query: 61 gaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctcc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 991 gaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctcc 1050 Query: 121 atgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1051 atgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccag 1110 Query: 181 aacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1111 aacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtc 1170 Query: 241 ggcggccactacgacttcgtctccggcaagttcgaaacatgggagcagtaaatcttcccc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1171 ggcggccactacgacttcgtctccggcaagttcgaaacatgggagcagtaaatcttcccc 1230 Query: 301 accggttaactccgacatatacaaacgtacatatatcaagatatcgtccgatcgatgtga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1231 accggttaactccgacatatacaaacgtacatatatcaagatatcgtccgatcgatgtga 1290 Query: 361 atgcaatgccatgggagtgcgtacc 385 ||||||||||||||||||||||||| Sbjct: 1291 atgcaatgccatgggagtgcgtacc 1315
>ref|NM_192260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 264 bits (133), Expect = 2e-67 Identities = 235/269 (87%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgtt 60 |||||||||||||| || ||||| ||||||||||| ||| ||||||||||||||||| Sbjct: 529 ggtggaatcaaggccctcctctcactcaaggatggagcaccagactccttccacttcgtc 588 Query: 61 gaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctcc 120 |||||||||||||||| ||| ||||| |||||||||||||| ||||| ||| |||||| Sbjct: 589 gaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccgagcacgcctcg 648 Query: 121 atgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccag 180 |||||||||||||||| ||| || || |||||||||||||||| ||| ||||| || Sbjct: 649 ctgcctttcgatgaccaatgcgccatcttggagaaggaggccgtgaaccaatccctggag 708 Query: 181 aacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtc 240 |||||| |||||||||||||||||||||||| | ||||||| ||||||||||||||| Sbjct: 709 aacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcgtc 768 Query: 241 ggcggccactacgacttcgtctccggcaa 269 ||||||||||||||||||||||||||||| Sbjct: 769 ggcggccactacgacttcgtctccggcaa 797
>dbj|AK099825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102G17, full insert sequence Length = 1163 Score = 264 bits (133), Expect = 2e-67 Identities = 235/269 (87%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgtt 60 |||||||||||||| || ||||| ||||||||||| ||| ||||||||||||||||| Sbjct: 579 ggtggaatcaaggccctcctctcactcaaggatggagcaccagactccttccacttcgtc 638 Query: 61 gaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctcc 120 |||||||||||||||| ||| ||||| |||||||||||||| ||||| ||| |||||| Sbjct: 639 gaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccgagcacgcctcg 698 Query: 121 atgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccag 180 |||||||||||||||| ||| || || |||||||||||||||| ||| ||||| || Sbjct: 699 ctgcctttcgatgaccaatgcgccatcttggagaaggaggccgtgaaccaatccctggag 758 Query: 181 aacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtc 240 |||||| |||||||||||||||||||||||| | ||||||| ||||||||||||||| Sbjct: 759 aacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcgtc 818 Query: 241 ggcggccactacgacttcgtctccggcaa 269 ||||||||||||||||||||||||||||| Sbjct: 819 ggcggccactacgacttcgtctccggcaa 847
>dbj|AK060890.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B12, full insert sequence Length = 1165 Score = 264 bits (133), Expect = 2e-67 Identities = 235/269 (87%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgtt 60 |||||||||||||| || ||||| ||||||||||| ||| ||||||||||||||||| Sbjct: 578 ggtggaatcaaggccctcctctcactcaaggatggagcaccagactccttccacttcgtc 637 Query: 61 gaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctcc 120 |||||||||||||||| ||| ||||| |||||||||||||| ||||| ||| |||||| Sbjct: 638 gaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccgagcacgcctcg 697 Query: 121 atgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccag 180 |||||||||||||||| ||| || || |||||||||||||||| ||| ||||| || Sbjct: 698 ctgcctttcgatgaccaatgcgccatcttggagaaggaggccgtgaaccaatccctggag 757 Query: 181 aacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtc 240 |||||| |||||||||||||||||||||||| | ||||||| ||||||||||||||| Sbjct: 758 aacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcgtc 817 Query: 241 ggcggccactacgacttcgtctccggcaa 269 ||||||||||||||||||||||||||||| Sbjct: 818 ggcggccactacgacttcgtctccggcaa 846
>gb|AF182806.1|AF182806 Oryza sativa carbonic anhydrase 3 mRNA, complete cds Length = 1169 Score = 264 bits (133), Expect = 2e-67 Identities = 235/269 (87%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgtt 60 |||||||||||||| || ||||| ||||||||||| ||| ||||||||||||||||| Sbjct: 573 ggtggaatcaaggccctcctctcactcaaggatggagcaccagactccttccacttcgtc 632 Query: 61 gaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctcc 120 |||||||||||||||| ||| ||||| |||||||||||||| ||||| ||| |||||| Sbjct: 633 gaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccgagcacgcctcg 692 Query: 121 atgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccag 180 |||||||||||||||| ||| || || |||||||||||||||| ||| ||||| || Sbjct: 693 ctgcctttcgatgaccaatgcgccatcttggagaaggaggccgtgaaccaatccctggag 752 Query: 181 aacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtc 240 |||||| |||||||||||||||||||||||| | ||||||| ||||||||||||||| Sbjct: 753 aacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcgtc 812 Query: 241 ggcggccactacgacttcgtctccggcaa 269 ||||||||||||||||||||||||||||| Sbjct: 813 ggcggccactacgacttcgtctccggcaa 841
>gb|U08404.1|OSU08404 Oryza sativa chloroplast carbonic anhydrase mRNA, complete cds Length = 1148 Score = 264 bits (133), Expect = 2e-67 Identities = 235/269 (87%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgtt 60 |||||||||||||| || ||||| ||||||||||| ||| ||||||||||||||||| Sbjct: 564 ggtggaatcaaggccctcctctcactcaaggatggagcaccagactccttccacttcgtc 623 Query: 61 gaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctcc 120 |||||||||||||||| ||| ||||| |||||||||||||| ||||| ||| |||||| Sbjct: 624 gaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccgagcacgcctcg 683 Query: 121 atgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccag 180 |||||||||||||||| ||| || || |||||||||||||||| ||| ||||| || Sbjct: 684 ctgcctttcgatgaccaatgcgccatcttggagaaggaggccgtgaaccaatccctggag 743 Query: 181 aacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtc 240 |||||| |||||||||||||||||||||||| | ||||||| ||||||||||||||| Sbjct: 744 aacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcgtc 803 Query: 241 ggcggccactacgacttcgtctccggcaa 269 ||||||||||||||||||||||||||||| Sbjct: 804 ggcggccactacgacttcgtctccggcaa 832
>gb|AY109272.1| Zea mays PCO064414 mRNA sequence Length = 978 Score = 172 bits (87), Expect = 5e-40 Identities = 186/219 (84%) Strand = Plus / Plus Query: 48 cttccacttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagac 107 |||||||||||| ||| ||||||||| |||||| ||||| |||||| |||||| ||| Sbjct: 501 cttccacttcgtcgagaactgggtcaagatcggcttccctgccaaggtcaaggtgaagaa 560 Query: 108 tgagtgcgcctccatgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaa 167 ||| ||||||| |||| ||||||||||||||| || ||||||||||||||||||| || Sbjct: 561 agagcacgcctccgtgcccttcgatgaccagtgctccatcctggagaaggaggccgtgaa 620 Query: 168 cgtgtccctccagaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaac 227 ||||||||| |||||||| ||||||||| |||||| |||| || || |||| || || Sbjct: 621 cgtgtccctggagaacctcaagacctaccccttcgtccaggaagggctggccaaggggac 680 Query: 228 cctcaagctcgtcggcggccactacgacttcgtctccgg 266 ||||||||| ||||||| ||||||||||||||| ||||| Sbjct: 681 cctcaagctggtcggcgcccactacgacttcgtgtccgg 719
>gb|U08403.1|ZMU08403 Zea mays Golden Bantam carbonic anhydrase mRNA, complete cds Length = 2184 Score = 145 bits (73), Expect = 1e-31 Identities = 175/209 (83%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgtt 60 ||||| |||| ||| || ||||| |||||||| ||||| |||| |||||||||||| Sbjct: 1069 ggtggcatcagggcgctcctctccctcaaggacggcgcgcccgacaacttccacttcgtg 1128 Query: 61 gaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctcc 120 |||||||||||||||||||| ||| |||||||| |||||| ||| ||| ||| ||| Sbjct: 1129 gaggactgggtcaggatcggcagccctgccaagaacaaggtgaagaaagagcacgcgtcc 1188 Query: 121 atgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccag 180 |||| ||||||||||||||| || ||||||||||||||||||| |||||||| |||||| Sbjct: 1189 gtgccgttcgatgaccagtgctccatcctggagaaggaggccgtgaacgtgtcgctccag 1248 Query: 181 aacctcttgacctacccgttcgtcaagga 209 |||||| || |||||| || |||||||| Sbjct: 1249 aacctcaagagctaccccttggtcaagga 1277 Score = 137 bits (69), Expect = 3e-29 Identities = 174/209 (83%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgtt 60 ||||| |||| ||| || ||||| |||||||| ||||| |||| |||| |||||| Sbjct: 463 ggtggcatcagggcgctcctctccctcaaggacggcgcgcccgacaacttcaccttcgtg 522 Query: 61 gaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctcc 120 |||||||||||||||||||| ||| |||||||| |||||| ||| ||| ||| ||| Sbjct: 523 gaggactgggtcaggatcggcagccctgccaagaacaaggtgaagaaagagcacgcgtcc 582 Query: 121 atgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccag 180 |||| ||||||||||||||| || ||||||||||||||||||| |||||||| |||||| Sbjct: 583 gtgccgttcgatgaccagtgctccatcctggagaaggaggccgtgaacgtgtcgctccag 642 Query: 181 aacctcttgacctacccgttcgtcaagga 209 |||||| || |||||| ||||||||||| Sbjct: 643 aacctcaagagctaccccttcgtcaagga 671 Score = 109 bits (55), Expect = 7e-21 Identities = 211/263 (80%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgtt 60 ||||| |||| ||| || ||||| ||| |||| |||||| ||| ||||||||||||| Sbjct: 1672 ggtggcatcagggcgctcctctcactccaggacggcgcacctgacaccttccacttcgtc 1731 Query: 61 gaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctcc 120 ||||||||||| | ||||| ||| ||||||| |||||| ||| ||| |||||| Sbjct: 1732 gaggactgggttaagatcgccttcattgccaagatgaaggtaaagaaagagcacgcctcg 1791 Query: 121 atgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccag 180 |||| |||||||||||||| || | || |||||||||||||| ||||||||||| || Sbjct: 1792 gtgccgttcgatgaccagtggtccattctcgagaaggaggccgtgaacgtgtccctggag 1851 Query: 181 aacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtc 240 |||||| ||||||||| ||||||||||| || | | || || ||||||||||| || Sbjct: 1852 aacctcaagacctaccccttcgtcaaggaagggcttgcaaatgggaccctcaagctgatc 1911 Query: 241 ggcggccactacgacttcgtctc 263 |||| |||||||||||| ||||| Sbjct: 1912 ggcgcccactacgactttgtctc 1934
>gb|U08401.1|ZMU08401 Zea mays carbonic anhydrase mRNA, complete cds Length = 1920 Score = 137 bits (69), Expect = 3e-29 Identities = 174/209 (83%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgtt 60 ||||| |||| ||| || ||||| |||||||| ||||| |||| |||| |||||| Sbjct: 742 ggtggcatcagggcgctcctctccctcaaggacggcgcgcccgacaacttcaccttcgtg 801 Query: 61 gaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctcc 120 |||||||||||||||||||| ||| |||||||| |||||| ||| ||| ||| ||| Sbjct: 802 gaggactgggtcaggatcggcagccctgccaagaacaaggtgaagaaagagcacgcgtcc 861 Query: 121 atgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccag 180 |||| ||||||||||||||| || ||||||||||||||||||| |||||||| |||||| Sbjct: 862 gtgccgttcgatgaccagtgctccatcctggagaaggaggccgtgaacgtgtcgctccag 921 Query: 181 aacctcttgacctacccgttcgtcaagga 209 |||||| || |||||| ||||||||||| Sbjct: 922 aacctcaagagctaccccttcgtcaagga 950 Score = 133 bits (67), Expect = 5e-28 Identities = 214/263 (81%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgtt 60 ||||| |||| ||| || ||||| ||| |||| ||||||| | || ||||||||||||| Sbjct: 1348 ggtggcatcagggcgctcctctcactccaggacggcgcagcctacaccttccacttcgtc 1407 Query: 61 gaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctcc 120 ||||||||||| | |||||| ||| ||||||| |||||| ||| ||| |||||| Sbjct: 1408 gaggactgggttaagatcggcttcattgccaagatgaaggtaaagaaagagcacgcctcg 1467 Query: 121 atgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccag 180 |||| ||||||||||||||| || | || |||||||||||||| ||||||||||| || Sbjct: 1468 gtgccgttcgatgaccagtgctccattctcgagaaggaggccgtgaacgtgtccctggag 1527 Query: 181 aacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtc 240 |||||| ||||||||| ||||||||||| || | | || || ||||||||||| || Sbjct: 1528 aacctcaagacctaccccttcgtcaaggaagggcttgcaaatgggaccctcaagctgatc 1587 Query: 241 ggcggccactacgacttcgtctc 263 |||| |||||||||||| ||||| Sbjct: 1588 ggcgcccactacgactttgtctc 1610
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 179 agaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcg 238 |||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||| Sbjct: 25698376 agaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcg 25698435 Query: 239 tcggcggccactacgacttcgtctccggcaa 269 ||||||||||||||||||||||||||||||| Sbjct: 25698436 tcggcggccactacgacttcgtctccggcaa 25698466 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 51 ccacttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactga 110 ||||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| || Sbjct: 25698058 ccacttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccga 25698117 Query: 111 gtgcgcctccatgcctttcgatgaccagtgcaccgtcctggagaagg 157 | |||||| |||||||||||||||| ||| || || ||||||||| Sbjct: 25698118 gcacgcctcgctgcctttcgatgaccaatgcgccatcttggagaagg 25698164 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatgg 35 |||||||||||||| || ||||| ||||||||||| Sbjct: 25697849 ggtggaatcaaggccctcctctcactcaaggatgg 25697883
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 179 agaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcg 238 |||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||| Sbjct: 145182 agaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcg 145241 Query: 239 tcggcggccactacgacttcgtctccggcaa 269 ||||||||||||||||||||||||||||||| Sbjct: 145242 tcggcggccactacgacttcgtctccggcaa 145272 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 51 ccacttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactga 110 ||||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| || Sbjct: 144864 ccacttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccga 144923 Query: 111 gtgcgcctccatgcctttcgatgaccagtgcaccgtcctggagaagg 157 | |||||| |||||||||||||||| ||| || || ||||||||| Sbjct: 144924 gcacgcctcgctgcctttcgatgaccaatgcgccatcttggagaagg 144970 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatgg 35 |||||||||||||| || ||||| ||||||||||| Sbjct: 144655 ggtggaatcaaggccctcctctcactcaaggatgg 144689
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 179 agaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcg 238 |||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||| Sbjct: 840 agaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcg 899 Query: 239 tcggcggccactacgacttcgtctccggcaa 269 ||||||||||||||||||||||||||||||| Sbjct: 900 tcggcggccactacgacttcgtctccggcaa 930 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 51 ccacttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactga 110 ||||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| || Sbjct: 522 ccacttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccga 581 Query: 111 gtgcgcctccatgcctttcgatgaccagtgcaccgtcctggagaagg 157 | |||||| |||||||||||||||| ||| || || ||||||||| Sbjct: 582 gcacgcctcgctgcctttcgatgaccaatgcgccatcttggagaagg 628 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatgg 35 |||||||||||||| || ||||| ||||||||||| Sbjct: 313 ggtggaatcaaggccctcctctcactcaaggatgg 347
>gb|AY109373.1| Zea mays CL2331_1 mRNA sequence Length = 2552 Score = 125 bits (63), Expect = 1e-25 Identities = 213/263 (80%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgtt 60 ||||| |||| ||| || ||||| ||| |||| |||||| ||| ||||||||||||| Sbjct: 1348 ggtggcatcagggcgctcctctccctccaggacggcgcacctgacaccttccacttcgtc 1407 Query: 61 gaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctcc 120 ||||||||||| | |||||| ||| ||||||| |||||| ||| ||| |||||| Sbjct: 1408 gaggactgggttaagatcggcttcattgccaagatgaaggtaaagaaagagcacgcctcg 1467 Query: 121 atgcctttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccag 180 |||| ||||||||||||||| || | || |||||||||||||| ||||||||||| || Sbjct: 1468 gtgccgttcgatgaccagtgctccattctcgagaaggaggccgtgaacgtgtccctggag 1527 Query: 181 aacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtc 240 |||||| ||||||||| ||||||||||| || | | || || ||||||||||| || Sbjct: 1528 aacctcaagacctaccccttcgtcaaggaagggcttgcaaatgggaccctcaagctgatc 1587 Query: 241 ggcggccactacgacttcgtctc 263 |||| |||||||||||| ||||| Sbjct: 1588 ggcgcccactacgactttgtctc 1610 Score = 87.7 bits (44), Expect = 2e-14 Identities = 131/160 (81%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgtt 60 ||||| |||| ||| || ||||| |||||||| ||||| |||| |||| |||||| Sbjct: 742 ggtggcatcagggcgctcctctccctcaaggacggcgcgcccgacaacttcaccttcgtg 801 Query: 61 gaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctcc 120 |||||||||||||||||||| ||| |||||||| |||||| ||| ||| ||| ||| Sbjct: 802 gaggactgggtcaggatcggcagccctgccaagaacaaggtgaagaaagagcacgcgtcc 861 Query: 121 atgcctttcgatgaccagtgcaccgtcctggagaaggagg 160 |||| ||||||||||||||| || ||||||||||||||| Sbjct: 862 gtgccgttcgatgaccagtgctccatcctggagaaggagg 901
>gb|U19741.1|UPU19741 Urochloa panicoides carbonic anhydrase 1 mRNA, complete cds Length = 1208 Score = 125 bits (63), Expect = 1e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 127 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 186 ||||| ||||||||| || || |||||||||||||||||||||| ||||| | |||||| Sbjct: 730 ttcgacgaccagtgctccatcttggagaaggaggccgtcaacgtctccctgtacaacctc 789 Query: 187 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 246 |||||||||| | || ||||| |||||| ||||||| |||||||||| ||||||||| Sbjct: 790 ctgacctacccctgggtgaaggaaggtgtgtccaacggctccctcaagctggtcggcggc 849 Query: 247 cactacgacttcgtc 261 ||||||||||||||| Sbjct: 850 cactacgacttcgtc 864 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 29 aggatggcgcagacgactccttccacttcgttgaggactgggtcaggatcgggttcccgg 88 |||| ||||||| |||| |||||||||||| |||||||||||||||||||| |||| | Sbjct: 632 aggacggcgcagccgacaacttccacttcgtcgaggactgggtcaggatcggcttcctcg 691 Query: 89 ccaagaagaaggt 101 ||||||||||||| Sbjct: 692 ccaagaagaaggt 704
>gb|U19739.1|UPU19739 Urochloa panicoides carbonic anhydrase 2 mRNA, complete cds Length = 1034 Score = 125 bits (63), Expect = 1e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 127 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 186 ||||||||||||||| || || ||||||||||||| |||||||| |||||| | |||||| Sbjct: 569 ttcgatgaccagtgctccatcttggagaaggaggcagtcaacgtctccctctacaacctc 628 Query: 187 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 246 |||||||||| | || ||||| || ||| ||||||| |||||||||| ||||||||| Sbjct: 629 ctgacctacccctgggtgaaggaaggcgtgtccaacgggtccctcaagctggtcggcggc 688 Query: 247 cactacgacttcgtc 261 ||||||||||||||| Sbjct: 689 cactacgacttcgtc 703 Score = 73.8 bits (37), Expect = 4e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 29 aggatggcgcagacgactccttccacttcgttgaggactgggtcaggatcgggttcccgg 88 |||||||||||| |||| |||||||||||| ||||| |||||||||||||| |||| | Sbjct: 471 aggatggcgcagccgacaacttccacttcgtcgaggattgggtcaggatcggcttcctcg 530 Query: 89 ccaagaagaaggt 101 | ||||||||||| Sbjct: 531 cgaagaagaaggt 543
>dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, complete cds Length = 8532 Score = 125 bits (63), Expect = 1e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 179 agaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcg 238 |||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||| Sbjct: 7957 agaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcg 8016 Query: 239 tcggcggccactacgacttcgtctccggcaa 269 ||||||||||||||||||||||||||||||| Sbjct: 8017 tcggcggccactacgacttcgtctccggcaa 8047 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 51 ccacttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactga 110 ||||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| || Sbjct: 7639 ccacttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccga 7698 Query: 111 gtgcgcctccatgcctttcgatgaccagtgcaccgtcctggagaagg 157 | |||||| |||||||||||||||| ||| || || ||||||||| Sbjct: 7699 gcacgcctcgctgcctttcgatgaccaatgcgccatcttggagaagg 7745 Score = 46.1 bits (23), Expect = 0.083 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1 ggtggaatcaaggctctgctctcgctcaaggatgg 35 |||||||||||||| || ||||| ||||||||||| Sbjct: 7430 ggtggaatcaaggccctcctctcactcaaggatgg 7464
>gb|M95073.1|MZEORFN Zea mays putative carbonic anhydrase homolog mRNA, partial cds Length = 210 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 127 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 186 ||||||||||||||| || | || |||||||||||||| ||||||||||| |||||||| Sbjct: 35 ttcgatgaccagtgctccattctcgagaaggaggccgtgaacgtgtccctggagaacctc 94 Query: 187 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 246 ||||||||| ||||||||||| || | | || || ||||||||||| |||||| | Sbjct: 95 aagacctaccccttcgtcaaggaagggcttgcaaatgggaccctcaagctgatcggcgcc 154 Query: 247 cactacgacttcgtctc 263 ||||||||||| ||||| Sbjct: 155 cactacgactttgtctc 171
>dbj|AP002373.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-212D19, complete sequence Length = 138197 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 acatatacaaacgtacatata 335 ||||||||||||||||||||| Sbjct: 80872 acatatacaaacgtacatata 80852
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 146 tcctggagaaggaggccgtcaacgt 170 |||||| |||||||||||||||||| Sbjct: 2833114 tcctggcgaaggaggccgtcaacgt 2833138
>ref|XM_467687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cctcaagctcgtcggcggcc 247 |||||||||||||||||||| Sbjct: 121 cctcaagctcgtcggcggcc 102
>ref|NM_196639.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0019M20.11), mRNA Length = 642 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cctcaagctcgtcggcggcc 247 |||||||||||||||||||| Sbjct: 208 cctcaagctcgtcggcggcc 189
>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete sequence Length = 252420 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 315 acatatacaaacgtacatatatca 338 ||||||||||| |||||||||||| Sbjct: 127196 acatatacaaatgtacatatatca 127219
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cctcaagctcgtcggcggcc 247 |||||||||||||||||||| Sbjct: 110239 cctcaagctcgtcggcggcc 110220
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cctcaagctcgtcggcggcc 247 |||||||||||||||||||| Sbjct: 14930461 cctcaagctcgtcggcggcc 14930442
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cctcaagctcgtcggcggcc 247 |||||||||||||||||||| Sbjct: 28350096 cctcaagctcgtcggcggcc 28350077
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cctcaagctcgtcggcggcc 247 |||||||||||||||||||| Sbjct: 30832097 cctcaagctcgtcggcggcc 30832078
>gb|AC018887.10| Homo sapiens BAC clone RP11-419E14 from 2, complete sequence Length = 189466 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 atatacaaacgtacatatat 336 |||||||||||||||||||| Sbjct: 169048 atatacaaacgtacatatat 169067
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cctcaagctcgtcggcggcc 247 |||||||||||||||||||| Sbjct: 62674 cctcaagctcgtcggcggcc 62655
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cctcaagctcgtcggcggcc 247 |||||||||||||||||||| Sbjct: 148125 cctcaagctcgtcggcggcc 148106
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cctcaagctcgtcggcggcc 247 |||||||||||||||||||| Sbjct: 15674 cctcaagctcgtcggcggcc 15655
>dbj|AK108113.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-C02, full insert sequence Length = 1138 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cctcaagctcgtcggcggcc 247 |||||||||||||||||||| Sbjct: 121 cctcaagctcgtcggcggcc 102
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cctcaagctcgtcggcggcc 247 |||||||||||||||||||| Sbjct: 59937 cctcaagctcgtcggcggcc 59918
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 cctcaagctcgtcggcggcc 247 |||||||||||||||||||| Sbjct: 14938702 cctcaagctcgtcggcggcc 14938683
>gb|AF018256.1|AF018256 Ambystoma tigrinum glutamate transporter 1 (sEAAT1) mRNA, complete cds Length = 1980 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ggccaagaagaaggtgcaga 106 |||||||||||||||||||| Sbjct: 246 ggccaagaagaaggtgcaga 265 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,370,521 Number of Sequences: 3902068 Number of extensions: 2370521 Number of successful extensions: 42056 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41855 Number of HSP's gapped (non-prelim): 197 length of query: 385 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 363 effective length of database: 17,147,199,772 effective search space: 6224433517236 effective search space used: 6224433517236 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)