>REFR_SWPVK (Q08517) Rifampicin resistance protein (62 kDa protein)|
          Length = 551

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 21/81 (25%), Positives = 35/81 (43%)
 Frame = +2

Query: 200 YLSVPFPVEKAPTKKIPLAKCALNSGVKVSKLTNFPVRGLVFERGNTLKDLADVVTNACI 379
           Y+  PF VEK     + LA   +   V  + +++  +R + F   N +KD   V   +CI
Sbjct: 158 YIKTPFDVEKT-FSSLKLADTKIVITVTFNPVSDIIIRDITFNYDNFVKDFVYVTELSCI 216

Query: 380 WLQENNVPFNVLISDSGRRIF 442
                N+       +  RR+F
Sbjct: 217 GYMVKNIQIKPSYIERPRRVF 237

>HEM3_AQUAE (O66621) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 304

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
 Frame = +2

Query: 245 IPLAKCALNSGVKVSKLTNFPVRGLVFERGNTLKDLADVVTNA----CIWLQENNVPFNV 412
           +PLAK     G+ V ++    + G +    ++LKD+  V+        I  +EN  P++V
Sbjct: 47  VPLAKIG-GKGLFVKEIEKALLEGSIDLAVHSLKDVPMVIPKGLKLGAITKREN--PYDV 103

Query: 413 LISDSGRRIFVFP 451
           LIS SG++++  P
Sbjct: 104 LISRSGKKLYELP 116

>PLSI_CHICK (P19179) Plastin-1 (Fimbrin)|
          Length = 630

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 37/138 (26%), Positives = 49/138 (35%), Gaps = 20/138 (14%)
 Frame = +2

Query: 77  DPESFLLALHMAAEAASPYFRLGYNSLGAFATINHLH---------FQAYYLS------- 208
           D  S+ L L          FR   NSLG    +NHL+         FQ Y ++       
Sbjct: 383 DNSSYDLTLLEGESNEERTFRNWMNSLGVSPYVNHLYSDLSDALIIFQLYEMTRVPVDWT 442

Query: 209 ----VPFPVEKAPTKKIPLAKCALNSGVKVSKLTNFPVRGLVFERGNTLKDLADVVTNAC 376
                P+P+     KKI     A+  G   +K +   + G     GN        +T A 
Sbjct: 443 HVNKRPYPLLGGNMKKIENCNYAVELGKTKAKFSLVGIAGHDLNEGN------PTLTLAL 496

Query: 377 IWLQENNVPFNVLISDSG 430
           IW        NVL SD G
Sbjct: 497 IWQLMRRYTLNVL-SDLG 513

>PLSI_HUMAN (Q14651) Plastin-1 (I-plastin) (Intestine-specific plastin)|
          Length = 629

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 17/116 (14%)
 Frame = +2

Query: 134 FRLGYNSLGAFATINHLH---------FQAYYLSVPFPVEKAPTKKIPLAKCALNSGVKV 286
           FR   NSLG    INHL+         FQ Y + +  PV  +   K P    AL   +K 
Sbjct: 401 FRNWMNSLGVNPYINHLYSDLADALVIFQLYEM-IRVPVNWSHVNKPPYP--ALGGNMKK 457

Query: 287 SKLTNFPVR--------GLVFERGNTLKDLADVVTNACIWLQENNVPFNVLISDSG 430
            +  N+ V          LV   G  L +    +T A +W        NVL SD G
Sbjct: 458 IENCNYAVELGKNKAKFSLVGIAGQDLNERNSTLTLALVWQLMRRYTLNVL-SDLG 512

>MOAC_METTH (O26900) Probable molybdenum cofactor biosynthesis protein C|
          Length = 159

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = -1

Query: 420 EMRTLKGTLFSWSQMQALVTTSAKSFSVFPLSNTRPLTGKFVSFD 286
           E +  KG + + +Q+ A+V    +++ + PL +  PLTG  V FD
Sbjct: 48  EKKIEKGNVLATAQIAAIVAVK-RTWEIIPLCHPLPLTGVDVEFD 91

>PLST_HUMAN (P13797) Plastin-3 (T-plastin)|
          Length = 627

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 16/110 (14%)
 Frame = +2

Query: 134 FRLGYNSLGAFATINHLH--------FQAYYLSVPFPVEKAPTKKIPLAKCALNSGVKVS 289
           FR   NSLG    +NHL+            Y  +  PV+ +   K P  K  L + +K  
Sbjct: 400 FRNWMNSLGVNPHVNHLYADLQDALVILQLYERIKVPVDWSKVNKPPYPK--LGANMKKL 457

Query: 290 KLTNFPVR--------GLVFERGNTLKDLADVVTNACIWLQENNVPFNVL 415
           +  N+ V          LV   G  L D    +T A +W        NVL
Sbjct: 458 ENCNYAVELGKHPAKFSLVGIGGQDLNDGNQTLTLALVWQLMRRYTLNVL 507

>CHS_PASMU (Q9CMP0) Chondroitin synthase (CS) [Includes:|
           Glucuronosyl-N-acetylgalactosaminyl-proteoglycan
           4-beta-N-acetylgalactosaminyltransferase (EC 2.4.1.175)
           (UDP-GalNAc transferase);
           N-acetylgalactosaminyl-proteoglycan
           3-beta-glucuronosyltransferase
          Length = 965

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 362 VTNACIWLQENNVPFNVLISDSGRR--IFVFPQCYAEKQALGEVSQ 493
           +T AC+  Q+ N PF V+++D G +  +    Q Y +K  +  V Q
Sbjct: 168 ITLACLVNQKTNYPFEVVVADDGSKENLLTIVQKYEQKLDIKYVRQ 213


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,298,496
Number of Sequences: 219361
Number of extensions: 1833437
Number of successful extensions: 5418
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5415
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)