>emb|AL136039.4|CNS01DVU Human chromosome 14 DNA sequence BAC R-799P8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174788

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   tatatttctttggaaatatca 153
             |||||||||||||||||||||
Sbjct: 77623 tatatttctttggaaatatca 77643

>gb|AC133583.13| Mus musculus chromosome 12, clone RP24-444A9, complete sequence
          Length = 123042

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   atatatttctttggaaatat 151
             ||||||||||||||||||||
Sbjct: 52846 atatatttctttggaaatat 52827

>emb|CR788266.6| Zebrafish DNA sequence from clone DKEY-199A23 in linkage group 14,
              complete sequence
          Length = 143937

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tcaatatatttctttggaaa 148
              ||||||||||||||||||||
Sbjct: 114835 tcaatatatttctttggaaa 114854

>emb|BX511311.24| Zebrafish DNA sequence from clone DKEY-278G4 in linkage group 8,
             complete sequence
          Length = 242845

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tcaatatatttctttggaaa 148
             ||||||||||||||||||||
Sbjct: 45444 tcaatatatttctttggaaa 45425

>emb|AL512844.5| Human DNA sequence from clone RP11-90H3 on chromosome 1 Contains two
             matrin 3 (MATR3) pseudogenes, complete sequence
          Length = 159017

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    atttctaaggaatgtgcttt 116
             ||||||||||||||||||||
Sbjct: 83858 atttctaaggaatgtgcttt 83877

>emb|CR381537.13| Zebrafish DNA sequence from clone DKEYP-9F9 in linkage group 14, complete
              sequence
          Length = 184228

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tcaatatatttctttggaaa 148
              ||||||||||||||||||||
Sbjct: 124333 tcaatatatttctttggaaa 124352



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tcaatatatttctttggaaa 148
             ||||||||||||||||||||
Sbjct: 53499 tcaatatatttctttggaaa 53518

>emb|X03686.1|TOTRVRG2 Tobacco rattle virus strain PSG RNA2
          Length = 1905

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 63   ttgaatttcttcttagagtt 82
            ||||||||||||||||||||
Sbjct: 1568 ttgaatttcttcttagagtt 1549

>emb|X03685.1|TOTRVRG1 Tobacco rattle virus strain PSG RNA1 3' terminal sequence (2 kb)
          Length = 2077

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 63   ttgaatttcttcttagagtt 82
            ||||||||||||||||||||
Sbjct: 1740 ttgaatttcttcttagagtt 1721

>emb|AL645943.19| Mouse DNA sequence from clone RP23-130E22 on chromosome 11 Contains a
             prohibitin (Phb) pseudogene and a novel gene, complete
             sequence
          Length = 213383

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 129   tcaatatatttctttggaaatatc 152
             |||||||||||||||||| |||||
Sbjct: 74876 tcaatatatttctttggagatatc 74899

>emb|BX537296.9| Zebrafish DNA sequence from clone DKEYP-86D4 in linkage group 14,
              complete sequence
          Length = 203251

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tcaatatatttctttggaaa 148
              ||||||||||||||||||||
Sbjct: 142561 tcaatatatttctttggaaa 142580

>gb|AC108360.3| Homo sapiens 12q BAC RP11-29C9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 157546

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     ttcttcttagagttgactca 88
              ||||||||||||||||||||
Sbjct: 120588 ttcttcttagagttgactca 120569

>emb|BX005371.20| Zebrafish DNA sequence from clone DKEY-242N19 in linkage group 6,
             complete sequence
          Length = 159186

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tcaatatatttctttggaaa 148
             ||||||||||||||||||||
Sbjct: 85239 tcaatatatttctttggaaa 85220

>gb|AY627018.1| Asterocheridae sp. 1 New Caledonia-RJH-2004 18S small subunit
            ribosomal RNA gene, partial sequence
          Length = 1775

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 61   tgttgaatttcttcttagag 80
            ||||||||||||||||||||
Sbjct: 1373 tgttgaatttcttcttagag 1392

>gb|AY627017.1| Orecturus sp. New Caledonia-RJH-2004 18S small subunit ribosomal RNA
            gene, partial sequence
          Length = 1807

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 61   tgttgaatttcttcttagag 80
            ||||||||||||||||||||
Sbjct: 1376 tgttgaatttcttcttagag 1395

>emb|AL953848.17| Zebrafish DNA sequence from clone CH211-244K5 in linkage group 6,
              complete sequence
          Length = 201360

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tcaatatatttctttggaaa 148
              ||||||||||||||||||||
Sbjct: 189076 tcaatatatttctttggaaa 189095



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tcaatatatttctttggaaa 148
              ||||||||||||||||||||
Sbjct: 106888 tcaatatatttctttggaaa 106907

>emb|BX470083.7| Zebrafish DNA sequence from clone CH211-122J16, complete sequence
          Length = 172836

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tcaatatatttctttggaaa 148
              ||||||||||||||||||||
Sbjct: 134034 tcaatatatttctttggaaa 134053



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   tcaatatatttctttggaaa 148
             ||||||||||||||||||||
Sbjct: 81464 tcaatatatttctttggaaa 81483

>gb|AC108721.5| Homo sapiens 12 BAC RP11-272B17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 217422

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     ttcttcttagagttgactca 88
              ||||||||||||||||||||
Sbjct: 137442 ttcttcttagagttgactca 137423

>gb|AC102632.8| Mus musculus chromosome 5, clone RP23-286C5, complete sequence
          Length = 200020

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tcaatatatttctttggaaa 148
             ||||||||||||||||||||
Sbjct: 91011 tcaatatatttctttggaaa 90992

>gb|U45312.1|MJU45312 Methanococcus jannaschii radA gene, complete cds
          Length = 1600

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 132 atatatttctttggaaatatcatc 155
           |||||||||||||| |||||||||
Sbjct: 327 atatatttctttggcaatatcatc 350

>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome
          Length = 1664970

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 132    atatatttctttggaaatatcatc 155
              |||||||||||||| |||||||||
Sbjct: 791872 atatatttctttggcaatatcatc 791895

>gb|AC004045.1|AC004045 Homo sapiens chromosome 4 clone B139M23 map 4q25, complete sequence
          Length = 106346

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   atttcttcttagagttgact 86
            ||||||||||||||||||||
Sbjct: 4227 atttcttcttagagttgact 4208

>emb|BX927341.21| Zebrafish DNA sequence from clone DKEY-56J1 in linkage group 14, complete
              sequence
          Length = 203575

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    tcaatatatttctttggaaa 148
              ||||||||||||||||||||
Sbjct: 120372 tcaatatatttctttggaaa 120353



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tcaatatatttctttggaaa 148
             ||||||||||||||||||||
Sbjct: 65879 tcaatatatttctttggaaa 65860



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   tcaatatatttctttggaaa 148
             ||||||||||||||||||||
Sbjct: 11835 tcaatatatttctttggaaa 11816

>emb|AL844149.4| Mouse DNA sequence from clone RP23-194D5 on chromosome 4, complete
              sequence
          Length = 199774

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    aatatatttctttggaaata 150
              ||||||||||||||||||||
Sbjct: 127160 aatatatttctttggaaata 127141


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,315,582
Number of Sequences: 3902068
Number of extensions: 2315582
Number of successful extensions: 45377
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45321
Number of HSP's gapped (non-prelim): 56
length of query: 316
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 294
effective length of database: 17,147,199,772
effective search space: 5041276732968
effective search space used: 5041276732968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)