ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasdp19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473781.1| Oryza sativa (japonica cultivar-group), predic... 168 1e-38
2emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4,... 168 1e-38
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
4dbj|AK070482.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 167 6e-38
6dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic D... 167 6e-38
7dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic D... 167 6e-38
8ref|XM_480917.1| Oryza sativa (japonica cultivar-group), mRNA 165 2e-37
9gb|AY105198.1| Zea mays PCO070011 mRNA sequence 157 6e-35
10dbj|D37938.1|PENPSBCA Pennisetum ciliare apomixis-associated mRN... 143 8e-31
11gb|U13148.1|PCU13148 Pennisetum ciliare possible apospory-associ... 143 8e-31
12emb|Z36544.1|PCAPOSPA1 P.ciliare (Higgins) apospory associated m... 143 8e-31
13gb|BT013379.1| Lycopersicon esculentum clone 135411R, mRNA sequence 80 1e-11
14ref|XM_474188.1| Oryza sativa (japonica cultivar-group), predic... 60 1e-05
15emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4,... 60 1e-05
16gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence 60 1e-05
17dbj|AK071255.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
18dbj|AK068928.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
19gb|AC155282.1| Medicago truncatula chromosome 2 BAC clone mth2-6... 56 2e-04
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
21dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
22ref|NM_125115.3| Arabidopsis thaliana aldose 1-epimerase AT5G573... 50 0.009
23gb|AY093119.1| Arabidopsis thaliana unknown protein (At5g57330) ... 50 0.009
24emb|BX830046.1|CNS09ZWS Arabidopsis thaliana Full-length cDNA Co... 50 0.009
25gb|BT003381.1| Arabidopsis thaliana unknown protein (At5g57330) ... 50 0.009
26dbj|AB019233.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 50 0.009
27ref|NM_118504.2| Arabidopsis thaliana aldose 1-epimerase AT4G237... 48 0.037
28gb|BT016450.1| Zea mays clone Contig283 mRNA sequence 48 0.037
29gb|BT011892.1| Arabidopsis thaliana At4g23730 mRNA sequence 48 0.037
30emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, ... 48 0.037
31emb|AL035394.1|ATF9D16 Arabidopsis thaliana DNA chromosome 4, BA... 48 0.037
32emb|BX828410.1|CNS0A2YX Arabidopsis thaliana Full-length cDNA Co... 48 0.037
33emb|BX826593.1|CNS0A2B0 Arabidopsis thaliana Full-length cDNA Co... 48 0.037
34gb|AY086170.1| Arabidopsis thaliana clone 21949 mRNA, complete s... 48 0.037
35gb|AY104413.1| Zea mays PCO098503 mRNA sequence 48 0.037
36emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c1... 48 0.037
37gb|AC144503.17| Medicago truncatula clone mth2-13f22, complete s... 46 0.14
38gb|AC164088.2| Mus musculus BAC clone RP23-65F24 from chromosome... 46 0.14
39gb|AC012151.14| Homo sapiens 12 BAC RP11-677C1 (Roswell Park Can... 46 0.14
40ref|NM_030827.1| Rattus norvegicus low density lipoprotein recep... 44 0.57
41ref|XM_579493.1| PREDICTED: Rattus norvegicus hypothetical gene ... 44 0.57
42gb|L34049.1|RATMEGA Rattus norvegicus megalin mRNA, complete cds 44 0.57
43gb|AE010403.1| Methanopyrus kandleri AV19 section 102 of 157 of ... 42 2.3
44gb|AE006283.1| Lactococcus lactis subsp. lactis IL1403 section 4... 42 2.3
45gb|AC023669.8| Homo sapiens BAC clone RP11-432O19 from 7, comple... 42 2.3
46dbj|AK022039.1| Homo sapiens cDNA FLJ11977 fis, clone HEMBB1001254 42 2.3
47gb|AF323670.1|AF323670 Bacteriophage bIL309, complete genome 42 2.3
48gb|AC019171.4| Homo sapiens BAC clone RP11-173C1 from 2, complet... 42 2.3
49gb|AC106879.4| Homo sapiens BAC clone RP11-674B11 from 4, comple... 42 2.3
50emb|CR391974.8| Zebrafish DNA sequence from clone CH211-59E10 in... 42 2.3
51gb|AC121142.12| Mus musculus chromosome 10, clone RP23-479G23, c... 40 8.9
52gb|AC154305.2| Mus musculus BAC clone RP24-492C11 from chromosom... 40 8.9
53gb|AC163769.4| Pan troglodytes BAC clone CH251-59O12 from chromo... 40 8.9
54gb|AC124084.8| Mus musculus chromosome 15, clone RP24-410P21, co... 40 8.9
55gb|AC110268.17| Mus musculus chromosome 1, clone RP23-320I7, com... 40 8.9
56ref|NM_015138.3| Homo sapiens Rtf1, Paf1/RNA polymerase II compl... 40 8.9
57gb|AC182234.3| Pan troglodytes BAC clone CH251-487I22 from chrom... 40 8.9
58gb|AC164433.4| Mus musculus BAC clone RP23-357G5 from chromosome... 40 8.9
59emb|BX537333.1| Human DNA sequence from clone WI2-88277B6 on chr... 40 8.9
60gb|BC037909.2| Homo sapiens cDNA clone IMAGE:5277089 40 8.9
61emb|AL391380.14| Human DNA sequence from clone RP11-432N13 on ch... 40 8.9
62gb|AC109660.8| Rattus norvegicus 14 BAC CH230-162H23 (Children's... 40 8.9
63gb|AC023951.19| Homo sapiens chromosome 15, clone RP11-815C16, c... 40 8.9
64gb|AC129351.6| Homo sapiens 12 BAC RP11-466G11 (Roswell Park Can... 40 8.9
65emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 8.9
66gb|BC015052.2| Homo sapiens Rtf1, Paf1/RNA polymerase II complex... 40 8.9
67gb|AC069045.11| Homo sapiens chromosome 15, clone RP11-111C2, co... 40 8.9
68emb|AL731853.9| Mouse DNA sequence from clone RP23-128G5 on chro... 40 8.9
69emb|CR859083.1| Pongo pygmaeus mRNA; cDNA DKFZp459K1729 (from cl... 40 8.9
70emb|CR600802.1| full-length cDNA clone CS0DC013YK22 of Neuroblas... 40 8.9
71gb|AC087721.4| Homo sapiens chromosome 15 clone RP11-16O9 map 15... 40 8.9
72gb|AC182468.2| Pan troglodytes BAC clone CH251-483N21 from chrom... 40 8.9
73gb|AC011118.13| Homo sapiens chromosome 8, clone RP11-163D8, com... 40 8.9
74gb|AC114301.2| Homo sapiens chromosome 5 clone RP11-143L23, comp... 40 8.9
75gb|AC110721.1| Homo sapiens chromosome 5 clone RP11-520E18, comp... 40 8.9
76ref|XM_942999.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 8.9
77ref|XM_931168.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 8.9
78gb|AC159192.2| Mus musculus BAC clone RP24-121M18 from chromosom... 40 8.9
79gb|AC016583.8| Homo sapiens chromosome 5 clone CTD-2591A1, compl... 40 8.9
80gb|AC000134.14| Homo sapiens Chromosome 11q13 BAC Clone 137c7, c... 40 8.9
81gb|AC157580.5| Mus musculus chromosome 15, clone RP24-82M3, comp... 40 8.9
82emb|BX248503.7| Zebrafish DNA sequence from clone CH211-232M7 in... 40 8.9
83gb|AC009268.10| Homo sapiens chromosome 15, clone RP11-74D7, com... 40 8.9
84dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
85emb|AJ439342.1|MCR439342 Mesembryanthemum crystallinum mRNA for ... 40 8.9
86gb|AC002427.1|AC002427 Homo sapiens BAC clone GS1-11E15 from 5q3... 40 8.9
87gb|AC107666.13| Mus musculus chromosome 5, clone RP23-111M3, com... 40 8.9
88dbj|AP001462.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.9
89dbj|AP000781.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.9
90gb|AC140038.13| Mus musculus chromosome 1, clone RP24-290D14, co... 40 8.9
91gb|AC154793.2| Mus musculus BAC clone RP23-88B6 from chromosome ... 40 8.9
92emb|AL627425.15| Mouse DNA sequence from clone RP23-283L16 on ch... 40 8.9
93emb|AL844854.6| Mouse DNA sequence from clone RP23-368I1 on chro... 40 8.9
94emb|AL732473.12| Mouse DNA sequence from clone RP23-130J8 on chr... 40 8.9
95dbj|AB060831.1| Macaca fascicularis brain cDNA clone:QtrA-10429,... 40 8.9
96dbj|D87440.2| Human mRNA for KIAA0252 gene, partial cds 40 8.9 
>ref|XM_473781.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 978

 Score =  168 bits (85), Expect = 1e-38
 Identities = 142/161 (88%)
 Strand = Plus / Minus

                                                                       
Query: 473 tgaagaaccttgtctggatctaactgaccactatagtaactggaaggaacagctgagagc 532
           ||||||||||| | |||||||||||| || ||| |||||||||||||||| || ||||| 
Sbjct: 971 tgaagaaccttatttggatctaactgcccgctacagtaactggaaggaactgcggagaga 912

                                                                       
Query: 533 tccaaccttcctttccactcttcaccaggcttcaaggtaatgggcttctcaacagctgca 592
           ||||   |||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 911 tccatttttcctttccactcttcgccaggcttcaaggtaatgggcttctcaacggctgca 852

                                                    
Query: 593 ggctccacacacaacatgtgcttatattcttcatcaccaaa 633
           || || ||||||||||| || || ||||||||||| |||||
Sbjct: 851 ggttcaacacacaacatatgtttgtattcttcatccccaaa 811
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>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02,
              complete sequence
          Length = 166804

 Score =  168 bits (85), Expect = 1e-38
 Identities = 142/161 (88%)
 Strand = Plus / Minus

                                                                          
Query: 473    tgaagaaccttgtctggatctaactgaccactatagtaactggaaggaacagctgagagc 532
              ||||||||||| | |||||||||||| || ||| |||||||||||||||| || ||||| 
Sbjct: 104838 tgaagaaccttatttggatctaactgcccgctacagtaactggaaggaactgcggagaga 104779

                                                                          
Query: 533    tccaaccttcctttccactcttcaccaggcttcaaggtaatgggcttctcaacagctgca 592
              ||||   |||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 104778 tccatttttcctttccactcttcgccaggcttcaaggtaatgggcttctcaacggctgca 104719

                                                       
Query: 593    ggctccacacacaacatgtgcttatattcttcatcaccaaa 633
              || || ||||||||||| || || ||||||||||| |||||
Sbjct: 104718 ggttcaacacacaacatatgtttgtattcttcatccccaaa 104678
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  168 bits (85), Expect = 1e-38
 Identities = 142/161 (88%)
 Strand = Plus / Minus

                                                                            
Query: 473      tgaagaaccttgtctggatctaactgaccactatagtaactggaaggaacagctgagagc 532
                ||||||||||| | |||||||||||| || ||| |||||||||||||||| || ||||| 
Sbjct: 30471461 tgaagaaccttatttggatctaactgcccgctacagtaactggaaggaactgcggagaga 30471402

                                                                            
Query: 533      tccaaccttcctttccactcttcaccaggcttcaaggtaatgggcttctcaacagctgca 592
                ||||   |||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 30471401 tccatttttcctttccactcttcgccaggcttcaaggtaatgggcttctcaacggctgca 30471342

                                                         
Query: 593      ggctccacacacaacatgtgcttatattcttcatcaccaaa 633
                || || ||||||||||| || || ||||||||||| |||||
Sbjct: 30471341 ggttcaacacacaacatatgtttgtattcttcatccccaaa 30471301



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 111/138 (80%)
 Strand = Plus / Minus

                                                                            
Query: 496      ctgaccactatagtaactggaaggaacagctgagagctccaaccttcctttccactcttc 555
                ||||||||| || || || || || ||||| || || |||||| ||||  ||||||| ||
Sbjct: 33595926 ctgaccactgtaatagctagatgggacagcagacagttccaactttccagtccactcctc 33595867

                                                                            
Query: 556      accaggcttcaaggtaatgggcttctcaacagctgcaggctccacacacaacatgtgctt 615
                |||||||||||| ||||| ||||| || | ||| || | ||||||||| | |||| | ||
Sbjct: 33595866 accaggcttcaaagtaatcggcttttctatagcagctgcctccacacagaccatgcgttt 33595807

                                  
Query: 616      atattcttcatcaccaaa 633
                |||||| ||||| |||||
Sbjct: 33595806 atattcgtcatccccaaa 33595789
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>dbj|AK070482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050C09, full
            insert sequence
          Length = 1518

 Score =  168 bits (85), Expect = 1e-38
 Identities = 142/161 (88%)
 Strand = Plus / Minus

                                                                        
Query: 473  tgaagaaccttgtctggatctaactgaccactatagtaactggaaggaacagctgagagc 532
            ||||||||||| | |||||||||||| || ||| |||||||||||||||| || ||||| 
Sbjct: 1055 tgaagaaccttatttggatctaactgcccgctacagtaactggaaggaactgcggagaga 996

                                                                        
Query: 533  tccaaccttcctttccactcttcaccaggcttcaaggtaatgggcttctcaacagctgca 592
            ||||   |||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 995  tccatttttcctttccactcttcgccaggcttcaaggtaatgggcttctcaacggctgca 936

                                                     
Query: 593  ggctccacacacaacatgtgcttatattcttcatcaccaaa 633
            || || ||||||||||| || || ||||||||||| |||||
Sbjct: 935  ggttcaacacacaacatatgtttgtattcttcatccccaaa 895
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  167 bits (84), Expect = 6e-38
 Identities = 156/180 (86%)
 Strand = Plus / Plus

                                                                           
Query: 457     tgaggattttcaaccatgaagaaccttgtctggatctaactgaccactatagtaactgga 516
               |||| ||| |||||| ||||| |||||   |||||||||||| |||||| ||||||||||
Sbjct: 8584336 tgagaattctcaaccttgaaggaccttcaatggatctaactgcccactacagtaactgga 8584395

                                                                           
Query: 517     aggaacagctgagagctccaaccttcctttccactcttcaccaggcttcaaggtaatggg 576
               |||||||||||||||  | |  |||||||||||||||||||| |||||||  ||||| ||
Sbjct: 8584396 aggaacagctgagagtgcaagtcttcctttccactcttcacctggcttcagagtaatagg 8584455

                                                                           
Query: 577     cttctcaacagctgcaggctccacacacaacatgtgcttatattcttcatcaccaaaatc 636
               ||||||||||||||||||||||||||| | |||||| || |||||| |||| ||||||||
Sbjct: 8584456 cttctcaacagctgcaggctccacacaaagcatgtgtttgtattctccatctccaaaatc 8584515
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>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0087F21
          Length = 187401

 Score =  167 bits (84), Expect = 6e-38
 Identities = 156/180 (86%)
 Strand = Plus / Plus

                                                                         
Query: 457   tgaggattttcaaccatgaagaaccttgtctggatctaactgaccactatagtaactgga 516
             |||| ||| |||||| ||||| |||||   |||||||||||| |||||| ||||||||||
Sbjct: 96247 tgagaattctcaaccttgaaggaccttcaatggatctaactgcccactacagtaactgga 96306

                                                                         
Query: 517   aggaacagctgagagctccaaccttcctttccactcttcaccaggcttcaaggtaatggg 576
             |||||||||||||||  | |  |||||||||||||||||||| |||||||  ||||| ||
Sbjct: 96307 aggaacagctgagagtgcaagtcttcctttccactcttcacctggcttcagagtaatagg 96366

                                                                         
Query: 577   cttctcaacagctgcaggctccacacacaacatgtgcttatattcttcatcaccaaaatc 636
             ||||||||||||||||||||||||||| | |||||| || |||||| |||| ||||||||
Sbjct: 96367 cttctcaacagctgcaggctccacacaaagcatgtgtttgtattctccatctccaaaatc 96426
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>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0031C02
          Length = 138843

 Score =  167 bits (84), Expect = 6e-38
 Identities = 156/180 (86%)
 Strand = Plus / Plus

                                                                          
Query: 457    tgaggattttcaaccatgaagaaccttgtctggatctaactgaccactatagtaactgga 516
              |||| ||| |||||| ||||| |||||   |||||||||||| |||||| ||||||||||
Sbjct: 113879 tgagaattctcaaccttgaaggaccttcaatggatctaactgcccactacagtaactgga 113938

                                                                          
Query: 517    aggaacagctgagagctccaaccttcctttccactcttcaccaggcttcaaggtaatggg 576
              |||||||||||||||  | |  |||||||||||||||||||| |||||||  ||||| ||
Sbjct: 113939 aggaacagctgagagtgcaagtcttcctttccactcttcacctggcttcagagtaatagg 113998

                                                                          
Query: 577    cttctcaacagctgcaggctccacacacaacatgtgcttatattcttcatcaccaaaatc 636
              ||||||||||||||||||||||||||| | |||||| || |||||| |||| ||||||||
Sbjct: 113999 cttctcaacagctgcaggctccacacaaagcatgtgtttgtattctccatctccaaaatc 114058
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>ref|XM_480917.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1014

 Score =  165 bits (83), Expect = 2e-37
 Identities = 149/171 (87%)
 Strand = Plus / Minus

                                                                        
Query: 466  tcaaccatgaagaaccttgtctggatctaactgaccactatagtaactggaaggaacagc 525
            |||||| ||||| |||||   |||||||||||| |||||| |||||||||||||||||||
Sbjct: 1014 tcaaccttgaaggaccttcaatggatctaactgcccactacagtaactggaaggaacagc 955

                                                                        
Query: 526  tgagagctccaaccttcctttccactcttcaccaggcttcaaggtaatgggcttctcaac 585
            ||||||  | |  |||||||||||||||||||| |||||||  ||||| |||||||||||
Sbjct: 954  tgagagtgcaagtcttcctttccactcttcacctggcttcagagtaataggcttctcaac 895

                                                               
Query: 586  agctgcaggctccacacacaacatgtgcttatattcttcatcaccaaaatc 636
            |||||||||||||||||| | |||||| || |||||| |||| ||||||||
Sbjct: 894  agctgcaggctccacacaaagcatgtgtttgtattctccatctccaaaatc 844
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>gb|AY105198.1| Zea mays PCO070011 mRNA sequence
          Length = 1505

 Score =  157 bits (79), Expect = 6e-35
 Identities = 157/183 (85%)
 Strand = Plus / Minus

                                                                        
Query: 454  aagtgaggattttcaaccatgaagaaccttgtctggatctaactgaccactatagtaact 513
            |||| ||||||||||||| ||||| |||||   |||||||||||| || ||| |||||||
Sbjct: 1134 aagtaaggattttcaaccctgaaggaccttcgatggatctaactgtccgctacagtaact 1075

                                                                        
Query: 514  ggaaggaacagctgagagctccaaccttcctttccactcttcaccaggcttcaaggtaat 573
             |||||||||||||| ||| | | |||||||||||||||||| ||||| ||||  |||||
Sbjct: 1074 cgaaggaacagctgaaagcacaagccttcctttccactcttccccaggtttcagagtaat 1015

                                                                        
Query: 574  gggcttctcaacagctgcaggctccacacacaacatgtgcttatattcttcatcaccaaa 633
             ||| ||||||||||||||||||||||||||| ||||  ||| |||||| |||| |||||
Sbjct: 1014 aggcctctcaacagctgcaggctccacacacagcatgctcttgtattctgcatccccaaa 955

               
Query: 634  atc 636
            |||
Sbjct: 954  atc 952
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>dbj|D37938.1|PENPSBCA Pennisetum ciliare apomixis-associated mRNA, clone:psb C
          Length = 1398

 Score =  143 bits (72), Expect = 8e-31
 Identities = 153/180 (85%)
 Strand = Plus / Minus

                                                                        
Query: 457  tgaggattttcaaccatgaagaaccttgtctggatctaactgaccactatagtaactgga 516
            |||||||| ||| ||||| || |||||   |||||| || || |||||| ||||||||||
Sbjct: 1100 tgaggattctcagccatgtagcaccttcaatggatccaattgcccactacagtaactgga 1041

                                                                        
Query: 517  aggaacagctgagagctccaaccttcctttccactcttcaccaggcttcaaggtaatggg 576
            ||| |||||||||||  | | ||||||| |||||||||||||||||||||  ||||| ||
Sbjct: 1040 aggtacagctgagagggcaatccttcctctccactcttcaccaggcttcagagtaatagg 981

                                                                        
Query: 577  cttctcaacagctgcaggctccacacacaacatgtgcttatattcttcatcaccaaaatc 636
            |||||||||||| |||||||||||||||| ||||| ||| |||||| |||| || |||||
Sbjct: 980  cttctcaacagcggcaggctccacacacagcatgttcttgtattctgcatccccgaaatc 921
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>gb|U13148.1|PCU13148 Pennisetum ciliare possible apospory-associated mRNA clone pSUB C,
            complete cds
          Length = 1398

 Score =  143 bits (72), Expect = 8e-31
 Identities = 153/180 (85%)
 Strand = Plus / Minus

                                                                        
Query: 457  tgaggattttcaaccatgaagaaccttgtctggatctaactgaccactatagtaactgga 516
            |||||||| ||| ||||| || |||||   |||||| || || |||||| ||||||||||
Sbjct: 1100 tgaggattctcagccatgtagcaccttcaatggatccaattgcccactacagtaactgga 1041

                                                                        
Query: 517  aggaacagctgagagctccaaccttcctttccactcttcaccaggcttcaaggtaatggg 576
            ||| |||||||||||  | | ||||||| |||||||||||||||||||||  ||||| ||
Sbjct: 1040 aggtacagctgagagggcaatccttcctctccactcttcaccaggcttcagagtaatagg 981

                                                                        
Query: 577  cttctcaacagctgcaggctccacacacaacatgtgcttatattcttcatcaccaaaatc 636
            |||||||||||| |||||||||||||||| ||||| ||| |||||| |||| || |||||
Sbjct: 980  cttctcaacagcggcaggctccacacacagcatgttcttgtattctgcatccccgaaatc 921
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>emb|Z36544.1|PCAPOSPA1 P.ciliare (Higgins) apospory associated mRNA, 1398bp
          Length = 1398

 Score =  143 bits (72), Expect = 8e-31
 Identities = 153/180 (85%)
 Strand = Plus / Minus

                                                                        
Query: 457  tgaggattttcaaccatgaagaaccttgtctggatctaactgaccactatagtaactgga 516
            |||||||| ||| ||||| || |||||   |||||| || || |||||| ||||||||||
Sbjct: 1100 tgaggattctcagccatgtagcaccttcaatggatccaattgcccactacagtaactgga 1041

                                                                        
Query: 517  aggaacagctgagagctccaaccttcctttccactcttcaccaggcttcaaggtaatggg 576
            ||| |||||||||||  | | ||||||| |||||||||||||||||||||  ||||| ||
Sbjct: 1040 aggtacagctgagagggcaatccttcctctccactcttcaccaggcttcagagtaatagg 981

                                                                        
Query: 577  cttctcaacagctgcaggctccacacacaacatgtgcttatattcttcatcaccaaaatc 636
            |||||||||||| |||||||||||||||| ||||| ||| |||||| |||| || |||||
Sbjct: 980  cttctcaacagcggcaggctccacacacagcatgttcttgtattctgcatccccgaaatc 921
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>gb|BT013379.1| Lycopersicon esculentum clone 135411R, mRNA sequence
          Length = 1477

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                       
Query: 509 taactggaaggaacagctgagagctccaaccttcctttccactcttcaccaggcttcaag 568
           ||||| ||||||||||| || || |||   |||||| |||||||||||||||| ||||| 
Sbjct: 947 taacttgaaggaacagcagaaagttcctgtcttcctctccactcttcaccaggtttcaaa 888

                                                                       
Query: 569 gtaatgggcttctcaacagctgcaggctccacacacaacatgtgcttatattcttcatca 628
           || || ||||| || || || |||| ||| ||||||| ||||||||| ||||| ||||| 
Sbjct: 887 gtgataggcttttccactgcagcagcctcaacacacagcatgtgcttgtattcatcatct 828

                   
Query: 629 ccaaaatc 636
           ||||||||
Sbjct: 827 ccaaaatc 820
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>ref|XM_474188.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1035

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 111/138 (80%)
 Strand = Plus / Minus

                                                                       
Query: 496 ctgaccactatagtaactggaaggaacagctgagagctccaaccttcctttccactcttc 555
           ||||||||| || || || || || ||||| || || |||||| ||||  ||||||| ||
Sbjct: 978 ctgaccactgtaatagctagatgggacagcagacagttccaactttccagtccactcctc 919

                                                                       
Query: 556 accaggcttcaaggtaatgggcttctcaacagctgcaggctccacacacaacatgtgctt 615
           |||||||||||| ||||| ||||| || | ||| || | ||||||||| | |||| | ||
Sbjct: 918 accaggcttcaaagtaatcggcttttctatagcagctgcctccacacagaccatgcgttt 859

                             
Query: 616 atattcttcatcaccaaa 633
           |||||| ||||| |||||
Sbjct: 858 atattcgtcatccccaaa 841
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>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23,
             complete sequence
          Length = 149353

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 111/138 (80%)
 Strand = Plus / Minus

                                                                         
Query: 496   ctgaccactatagtaactggaaggaacagctgagagctccaaccttcctttccactcttc 555
             ||||||||| || || || || || ||||| || || |||||| ||||  ||||||| ||
Sbjct: 26986 ctgaccactgtaatagctagatgggacagcagacagttccaactttccagtccactcctc 26927

                                                                         
Query: 556   accaggcttcaaggtaatgggcttctcaacagctgcaggctccacacacaacatgtgctt 615
             |||||||||||| ||||| ||||| || | ||| || | ||||||||| | |||| | ||
Sbjct: 26926 accaggcttcaaagtaatcggcttttctatagcagctgcctccacacagaccatgcgttt 26867

                               
Query: 616   atattcttcatcaccaaa 633
             |||||| ||||| |||||
Sbjct: 26866 atattcgtcatccccaaa 26849
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>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence
          Length = 181577

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 111/138 (80%)
 Strand = Plus / Minus

                                                                         
Query: 496   ctgaccactatagtaactggaaggaacagctgagagctccaaccttcctttccactcttc 555
             ||||||||| || || || || || ||||| || || |||||| ||||  ||||||| ||
Sbjct: 27180 ctgaccactgtaatagctagatgggacagcagacagttccaactttccagtccactcctc 27121

                                                                         
Query: 556   accaggcttcaaggtaatgggcttctcaacagctgcaggctccacacacaacatgtgctt 615
             |||||||||||| ||||| ||||| || | ||| || | ||||||||| | |||| | ||
Sbjct: 27120 accaggcttcaaagtaatcggcttttctatagcagctgcctccacacagaccatgcgttt 27061

                               
Query: 616   atattcttcatcaccaaa 633
             |||||| ||||| |||||
Sbjct: 27060 atattcgtcatccccaaa 27043
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>dbj|AK071255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086C22, full
            insert sequence
          Length = 1660

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 111/138 (80%)
 Strand = Plus / Minus

                                                                        
Query: 496  ctgaccactatagtaactggaaggaacagctgagagctccaaccttcctttccactcttc 555
            ||||||||| || || || || || ||||| || || |||||| ||||  ||||||| ||
Sbjct: 1200 ctgaccactgtaatagctagatgggacagcagacagttccaactttccagtccactcctc 1141

                                                                        
Query: 556  accaggcttcaaggtaatgggcttctcaacagctgcaggctccacacacaacatgtgctt 615
            |||||||||||| ||||| ||||| || | ||| || | ||||||||| | |||| | ||
Sbjct: 1140 accaggcttcaaagtaatcggcttttctatagcagctgcctccacacagaccatgcgttt 1081

                              
Query: 616  atattcttcatcaccaaa 633
            |||||| ||||| |||||
Sbjct: 1080 atattcgtcatccccaaa 1063
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>dbj|AK068928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170O13, full
            insert sequence
          Length = 3699

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 111/138 (80%)
 Strand = Plus / Minus

                                                                        
Query: 496  ctgaccactatagtaactggaaggaacagctgagagctccaaccttcctttccactcttc 555
            ||||||||| || || || || || ||||| || || |||||| ||||  ||||||| ||
Sbjct: 1855 ctgaccactgtaatagctagatgggacagcagacagttccaactttccagtccactcctc 1796

                                                                        
Query: 556  accaggcttcaaggtaatgggcttctcaacagctgcaggctccacacacaacatgtgctt 615
            |||||||||||| ||||| ||||| || | ||| || | ||||||||| | |||| | ||
Sbjct: 1795 accaggcttcaaagtaatcggcttttctatagcagctgcctccacacagaccatgcgttt 1736

                              
Query: 616  atattcttcatcaccaaa 633
            |||||| ||||| |||||
Sbjct: 1735 atattcgtcatccccaaa 1718
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>gb|AC155282.1| Medicago truncatula chromosome 2 BAC clone mth2-63e12, complete sequence
          Length = 251117

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                          
Query: 500    ccactatagtaactggaaggaacagctgagagctccaaccttcctttccactcttcacca 559
              |||||| ||||||| || ||||||||||| ||||| |  ||||||||||| ||||| |||
Sbjct: 167353 ccactacagtaactagatggaacagctgaaagctctagtcttcctttccattcttctcca 167294

                      
Query: 560    ggcttcaa 567
              || |||||
Sbjct: 167293 ggtttcaa 167286
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                             
Query: 538     ccttcctttccactcttcaccaggcttcaaggtaatgggcttctca 583
               |||||||| |||||||||||||||| | || ||||| |||||||||
Sbjct: 4221028 ccttccttgccactcttcaccaggccttaatgtaattggcttctca 4221073



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 27      tgataaattgtgctccttga 46
               ||||||||||||||||||||
Sbjct: 6775087 tgataaattgtgctccttga 6775068
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>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0504A05
          Length = 148360

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 538   ccttcctttccactcttcaccaggcttcaaggtaatgggcttctca 583
             |||||||| |||||||||||||||| | || ||||| |||||||||
Sbjct: 37842 ccttccttgccactcttcaccaggccttaatgtaattggcttctca 37887
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>ref|NM_125115.3| Arabidopsis thaliana aldose 1-epimerase AT5G57330 mRNA, complete cds
          Length = 1463

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 97/121 (80%)
 Strand = Plus / Minus

                                                                        
Query: 507  agtaactggaaggaacagctgagagctccaaccttcctttccactcttcaccaggcttca 566
            ||||||| |||||||| || ||||| || |  ||||||||||| |||||||| || ||||
Sbjct: 1079 agtaactagaaggaactgcagagagttcgagtcttcctttccattcttcaccgggtttca 1020

                                                                        
Query: 567  aggtaatgggcttctcaacagctgcaggctccacacacaacatgtgcttatattcttcat 626
            | || || ||  |||| | ||| ||||  |||||||| | ||| |||||||| |||||||
Sbjct: 1019 atgtgatcggtctctcgatagccgcagcttccacacaaagcatatgcttatagtcttcat 960

             
Query: 627  c 627
            |
Sbjct: 959  c 959
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>gb|AY093119.1| Arabidopsis thaliana unknown protein (At5g57330) mRNA, complete cds
          Length = 1379

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 97/121 (80%)
 Strand = Plus / Minus

                                                                        
Query: 507  agtaactggaaggaacagctgagagctccaaccttcctttccactcttcaccaggcttca 566
            ||||||| |||||||| || ||||| || |  ||||||||||| |||||||| || ||||
Sbjct: 1078 agtaactagaaggaactgcagagagttcgagtcttcctttccattcttcaccgggtttca 1019

                                                                        
Query: 567  aggtaatgggcttctcaacagctgcaggctccacacacaacatgtgcttatattcttcat 626
            | || || ||  |||| | ||| ||||  |||||||| | ||| |||||||| |||||||
Sbjct: 1018 atgtgatcggtctctcgatagccgcagcttccacacaaagcatatgcttatagtcttcat 959

             
Query: 627  c 627
            |
Sbjct: 958  c 958
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>emb|BX830046.1|CNS09ZWS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB55ZF08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 769

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 97/121 (80%)
 Strand = Plus / Minus

                                                                       
Query: 507 agtaactggaaggaacagctgagagctccaaccttcctttccactcttcaccaggcttca 566
           ||||||| |||||||| || ||||| || |  ||||||||||| |||||||| || ||||
Sbjct: 484 agtaactagaaggaactgcagagagttcgagtcttcctttccattcttcaccgggtttca 425

                                                                       
Query: 567 aggtaatgggcttctcaacagctgcaggctccacacacaacatgtgcttatattcttcat 626
           | || || ||  |||| | ||| ||||  |||||||| | ||| |||||||| |||||||
Sbjct: 424 atgtgatcggtctctcgatagccgcagcttccacacaaagcatatgcttatagtcttcat 365

            
Query: 627 c 627
           |
Sbjct: 364 c 364
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>gb|BT003381.1| Arabidopsis thaliana unknown protein (At5g57330) mRNA, complete cds
          Length = 1151

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 97/121 (80%)
 Strand = Plus / Minus

                                                                       
Query: 507 agtaactggaaggaacagctgagagctccaaccttcctttccactcttcaccaggcttca 566
           ||||||| |||||||| || ||||| || |  ||||||||||| |||||||| || ||||
Sbjct: 901 agtaactagaaggaactgcagagagttcgagtcttcctttccattcttcaccgggtttca 842

                                                                       
Query: 567 aggtaatgggcttctcaacagctgcaggctccacacacaacatgtgcttatattcttcat 626
           | || || ||  |||| | ||| ||||  |||||||| | ||| |||||||| |||||||
Sbjct: 841 atgtgatcggtctctcgatagccgcagcttccacacaaagcatatgcttatagtcttcat 782

            
Query: 627 c 627
           |
Sbjct: 781 c 781
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>dbj|AB019233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJB24
          Length = 58589

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 97/121 (80%)
 Strand = Plus / Minus

                                                                         
Query: 507   agtaactggaaggaacagctgagagctccaaccttcctttccactcttcaccaggcttca 566
             ||||||| |||||||| || ||||| || |  ||||||||||| |||||||| || ||||
Sbjct: 44664 agtaactagaaggaactgcagagagttcgagtcttcctttccattcttcaccgggtttca 44605

                                                                         
Query: 567   aggtaatgggcttctcaacagctgcaggctccacacacaacatgtgcttatattcttcat 626
             | || || ||  |||| | ||| ||||  |||||||| | ||| |||||||| |||||||
Sbjct: 44604 atgtgatcggtctctcgatagccgcagcttccacacaaagcatatgcttatagtcttcat 44545

              
Query: 627   c 627
             |
Sbjct: 44544 c 44544
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>ref|NM_118504.2| Arabidopsis thaliana aldose 1-epimerase AT4G23730 mRNA, complete cds
          Length = 1694

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                        
Query: 546  tccactcttcaccaggcttcaaggtaatgggcttctcaacagctgcaggctccacacaca 605
            |||| |||||||| || |||||||| ||||| |||||||  |||||    ||||||||||
Sbjct: 1354 tccattcttcacccggtttcaaggtgatgggtttctcaatggctgctccatccacacaca 1295

                                            
Query: 606  acatgtgcttatattcttcatcaccaaaatcc 637
            |||||||  |||| || ||||| || ||||||
Sbjct: 1294 acatgtgtctatactcatcatctcccaaatcc 1263
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>gb|BT016450.1| Zea mays clone Contig283 mRNA sequence
          Length = 1470

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                        
Query: 491  tctaactgaccactatagtaactggaaggaacagctgagagctccaaccttcctttccac 550
            |||| ||||||||| || || || || || ||||| || || |||||| ||||  |||||
Sbjct: 1068 tctagctgaccactgtaatagctagatggcacagcagaaagttccaactttccagtccac 1009

                            
Query: 551  tcttcaccaggcttca 566
            ||||||||||||||||
Sbjct: 1008 tcttcaccaggcttca 993
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>gb|BT011892.1| Arabidopsis thaliana At4g23730 mRNA sequence
          Length = 918

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                       
Query: 546 tccactcttcaccaggcttcaaggtaatgggcttctcaacagctgcaggctccacacaca 605
           |||| |||||||| || |||||||| ||||| |||||||  |||||    ||||||||||
Sbjct: 880 tccattcttcacccggtttcaaggtgatgggtttctcaatggctgctccatccacacaca 821

                                           
Query: 606 acatgtgcttatattcttcatcaccaaaatcc 637
           |||||||  |||| || ||||| || ||||||
Sbjct: 820 acatgtgtctatactcatcatctcccaaatcc 789
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>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60
          Length = 196677

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                         
Query: 546   tccactcttcaccaggcttcaaggtaatgggcttctcaacagctgcaggctccacacaca 605
             |||| |||||||| || |||||||| ||||| |||||||  |||||    ||||||||||
Sbjct: 24138 tccattcttcacccggtttcaaggtgatgggtttctcaatggctgctccatccacacaca 24079

                                             
Query: 606   acatgtgcttatattcttcatcaccaaaatcc 637
             |||||||  |||| || ||||| || ||||||
Sbjct: 24078 acatgtgtctatactcatcatctcccaaatcc 24047
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>emb|AL035394.1|ATF9D16 Arabidopsis thaliana DNA chromosome 4, BAC clone  F9D16 (ESSAII
             project)
          Length = 119430

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                         
Query: 546   tccactcttcaccaggcttcaaggtaatgggcttctcaacagctgcaggctccacacaca 605
             |||| |||||||| || |||||||| ||||| |||||||  |||||    ||||||||||
Sbjct: 82547 tccattcttcacccggtttcaaggtgatgggtttctcaatggctgctccatccacacaca 82488

                                             
Query: 606   acatgtgcttatattcttcatcaccaaaatcc 637
             |||||||  |||| || ||||| || ||||||
Sbjct: 82487 acatgtgtctatactcatcatctcccaaatcc 82456
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>emb|BX828410.1|CNS0A2YX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH86ZF02 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1520

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                        
Query: 546  tccactcttcaccaggcttcaaggtaatgggcttctcaacagctgcaggctccacacaca 605
            |||| |||||||| || |||||||| ||||| |||||||  |||||    ||||||||||
Sbjct: 1279 tccattcttcacccggtttcaaggtgatgggtttctcaatggctgctccatccacacaca 1220

                                            
Query: 606  acatgtgcttatattcttcatcaccaaaatcc 637
            |||||||  |||| || ||||| || ||||||
Sbjct: 1219 acatgtgtctatactcatcatctcccaaatcc 1188
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>emb|BX826593.1|CNS0A2B0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB45ZA09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1198

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                       
Query: 546 tccactcttcaccaggcttcaaggtaatgggcttctcaacagctgcaggctccacacaca 605
           |||| |||||||| || |||||||| ||||| |||||||  |||||    ||||||||||
Sbjct: 899 tccattcttcacccggtttcaaggtgatgggtttctcaatggctgctccatccacacaca 840

                                           
Query: 606 acatgtgcttatattcttcatcaccaaaatcc 637
           |||||||  |||| || ||||| || ||||||
Sbjct: 839 acatgtgtctatactcatcatctcccaaatcc 808
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>gb|AY086170.1| Arabidopsis thaliana clone 21949 mRNA, complete sequence
          Length = 1097

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                        
Query: 546  tccactcttcaccaggcttcaaggtaatgggcttctcaacagctgcaggctccacacaca 605
            |||| |||||||| || |||||||| ||||| |||||||  |||||    ||||||||||
Sbjct: 1051 tccattcttcacccggtttcaaggtgatgggtttctcaatggctgctccatccacacaca 992

                                            
Query: 606  acatgtgcttatattcttcatcaccaaaatcc 637
            |||||||  |||| || ||||| || ||||||
Sbjct: 991  acatgtgtctatactcatcatctcccaaatcc 960
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>gb|AY104413.1| Zea mays PCO098503 mRNA sequence
          Length = 1571

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                        
Query: 491  tctaactgaccactatagtaactggaaggaacagctgagagctccaaccttcctttccac 550
            |||| ||||||||| || || || || || ||||| || || |||||| ||||  |||||
Sbjct: 1216 tctagctgaccactgtaatagctagatggcacagcagaaagttccaactttccagtccac 1157

                            
Query: 551  tcttcaccaggcttca 566
            ||||||||||||||||
Sbjct: 1156 tcttcaccaggcttca 1141
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>emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE
          Length = 136068

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 99/124 (79%)
 Strand = Plus / Minus

                                                                         
Query: 515   gaaggaacagctgagagctccaaccttcctttccactcttcaccaggcttcaaggtaatg 574
             ||||||||| | ||||||||||| |  ||  |||| ||||| || ||||||||||| || 
Sbjct: 53339 gaaggaacaacggagagctccaaacggccggtccattcttctcccggcttcaaggttatt 53280

                                                                         
Query: 575   ggcttctcaacagctgcaggctccacacacaacatgtgcttatattcttcatcaccaaaa 634
             |||||  |||| ||||||   ||||| || | ||| ||||| || |||||||| ||||||
Sbjct: 53279 ggctttccaactgctgcaccatccacgcagagcatttgcttgtactcttcatccccaaaa 53220

                 
Query: 635   tcca 638
             ||||
Sbjct: 53219 tcca 53216
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>gb|AC144503.17| Medicago truncatula clone mth2-13f22, complete sequence
          Length = 116810

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 539   cttcctttccactcttcaccagg 561
             |||||||||||||||||||||||
Sbjct: 22183 cttcctttccactcttcaccagg 22161
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>gb|AC164088.2| Mus musculus BAC clone RP23-65F24 from chromosome 16, complete sequence
          Length = 240181

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 164   ccagggccaggaggcaaccctaa 186
             |||||||||||||||||||||||
Sbjct: 62896 ccagggccaggaggcaaccctaa 62918
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>gb|AC012151.14| Homo sapiens 12 BAC RP11-677C1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 83945

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 170   ccaggaggcaaccctaaactatcggaa 196
             |||||||||||||||||| ||||||||
Sbjct: 36689 ccaggaggcaaccctaaagtatcggaa 36715
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>ref|NM_030827.1| Rattus norvegicus low density lipoprotein receptor-related protein 2
            (Lrp2), mRNA
          Length = 15438

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 359  gatgaaagccagcaagttcaca 380
            ||||||||||||||||||||||
Sbjct: 1991 gatgaaagccagcaagttcaca 2012
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>ref|XM_579493.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_030827
            (LOC497772), mRNA
          Length = 15437

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 359  gatgaaagccagcaagttcaca 380
            ||||||||||||||||||||||
Sbjct: 1991 gatgaaagccagcaagttcaca 2012
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>gb|L34049.1|RATMEGA Rattus norvegicus megalin mRNA, complete cds
          Length = 15438

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 359  gatgaaagccagcaagttcaca 380
            ||||||||||||||||||||||
Sbjct: 1991 gatgaaagccagcaagttcaca 2012
to top
>gb|AE010403.1| Methanopyrus kandleri AV19 section 102 of 157 of the complete genome
          Length = 10558

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 514  ggaaggaacagctgagagctc 534
            |||||||||||||||||||||
Sbjct: 4818 ggaaggaacagctgagagctc 4838
to top
>gb|AE006283.1| Lactococcus lactis subsp. lactis IL1403 section 45 of 218 of the
            complete genome
          Length = 11299

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 107  caatagtctgataacaattggtact 131
            ||||||||| |||||||||||||||
Sbjct: 9611 caatagtcttataacaattggtact 9635
to top
>gb|AC023669.8| Homo sapiens BAC clone RP11-432O19 from 7, complete sequence
          Length = 207806

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 603   acaacatgtgcttatattctt 623
             |||||||||||||||||||||
Sbjct: 31844 acaacatgtgcttatattctt 31864
to top
>dbj|AK022039.1| Homo sapiens cDNA FLJ11977 fis, clone HEMBB1001254
          Length = 3559

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 225  gactgaacactgagctgagtg 245
            |||||||||||||||||||||
Sbjct: 1550 gactgaacactgagctgagtg 1570
to top
>gb|AF323670.1|AF323670 Bacteriophage bIL309, complete genome
          Length = 36949

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 107   caatagtctgataacaattggtact 131
             ||||||||| |||||||||||||||
Sbjct: 34495 caatagtcttataacaattggtact 34519
to top
>gb|AC019171.4| Homo sapiens BAC clone RP11-173C1 from 2, complete sequence
          Length = 180445

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 225   gactgaacactgagctgagtg 245
             |||||||||||||||||||||
Sbjct: 73075 gactgaacactgagctgagtg 73055
to top
>gb|AC106879.4| Homo sapiens BAC clone RP11-674B11 from 4, complete sequence
          Length = 121163

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 613  cttatattcttcatcaccaaa 633
            |||||||||||||||||||||
Sbjct: 7225 cttatattcttcatcaccaaa 7245
to top
>emb|CR391974.8| Zebrafish DNA sequence from clone CH211-59E10 in linkage group 19,
              complete sequence
          Length = 179116

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 316    atacatgaagaaataaacatatgta 340
              |||||| ||||||||||||||||||
Sbjct: 143220 atacataaagaaataaacatatgta 143196
to top
>gb|AC121142.12| Mus musculus chromosome 10, clone RP23-479G23, complete sequence
          Length = 203838

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    agcaagttcacatagcatca 388
              ||||||||||||||||||||
Sbjct: 146933 agcaagttcacatagcatca 146952
to top
>gb|AC154305.2| Mus musculus BAC clone RP24-492C11 from chromosome 14, complete sequence
          Length = 181910

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 532    ctccaaccttcctttccact 551
              ||||||||||||||||||||
Sbjct: 122610 ctccaaccttcctttccact 122629
to top
>gb|AC163769.4| Pan troglodytes BAC clone CH251-59O12 from chromosome unknown, complete
             sequence
          Length = 185010

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   agaaccttgtctggatctaa 495
             ||||||||||||||||||||
Sbjct: 67592 agaaccttgtctggatctaa 67573
to top
>gb|AC124084.8| Mus musculus chromosome 15, clone RP24-410P21, complete sequence
          Length = 183447

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 515   gaaggaacagctgagagctc 534
             ||||||||||||||||||||
Sbjct: 27037 gaaggaacagctgagagctc 27056
to top
>gb|AC110268.17| Mus musculus chromosome 1, clone RP23-320I7, complete sequence
          Length = 185246

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 582   caacagctgcaggctccaca 601
             ||||||||||||||||||||
Sbjct: 61638 caacagctgcaggctccaca 61657
to top
>ref|NM_015138.3| Homo sapiens Rtf1, Paf1/RNA polymerase II complex component, homolog
            (S. cerevisiae) (RTF1), mRNA
          Length = 5014

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 516  aaggaacagctgagagctcc 535
            ||||||||||||||||||||
Sbjct: 3784 aaggaacagctgagagctcc 3803
to top
>gb|AC182234.3| Pan troglodytes BAC clone CH251-487I22 from chromosome x, complete
             sequence
          Length = 188826

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 574   gggcttctcaacagctgcag 593
             ||||||||||||||||||||
Sbjct: 74584 gggcttctcaacagctgcag 74565
to top
>gb|AC164433.4| Mus musculus BAC clone RP23-357G5 from chromosome 14, complete sequence
          Length = 190748

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 513    tggaaggaacagctgagagc 532
              ||||||||||||||||||||
Sbjct: 180553 tggaaggaacagctgagagc 180572
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>emb|BX537333.1| Human DNA sequence from clone WI2-88277B6 on chromosome X Contains
           gene LOC257122, complete sequence
          Length = 37959

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 574 gggcttctcaacagctgcag 593
           ||||||||||||||||||||
Sbjct: 49  gggcttctcaacagctgcag 30
to top
>gb|BC037909.2| Homo sapiens cDNA clone IMAGE:5277089
          Length = 1929

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   tgaattatctcacaccagca 63
            ||||||||||||||||||||
Sbjct: 1590 tgaattatctcacaccagca 1571
to top
>emb|AL391380.14| Human DNA sequence from clone RP11-432N13 on chromosome X Contains the 3'
              end of the LOC203522 gene (FLJ39225), a v-ets
              erythroblastosis virus E26 oncogene homolog 2 (avian)
              (ETS2) pseudogene and two sarcoma antigen (SAGE)
              pseudogenes, complete sequence
          Length = 144896

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 574    gggcttctcaacagctgcag 593
              ||||||||||||||||||||
Sbjct: 142945 gggcttctcaacagctgcag 142926
to top
>gb|AC109660.8| Rattus norvegicus 14 BAC CH230-162H23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 140261

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 517   aggaacagctgagagctcca 536
             ||||||||||||||||||||
Sbjct: 90663 aggaacagctgagagctcca 90682
to top
>gb|AC023951.19| Homo sapiens chromosome 15, clone RP11-815C16, complete sequence
          Length = 186341

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   gaacactgagctgagtgcat 248
             ||||||||||||||||||||
Sbjct: 90737 gaacactgagctgagtgcat 90718
to top
>gb|AC129351.6| Homo sapiens 12 BAC RP11-466G11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 161618

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   gccctgaagtgttcctgtac 443
             ||||||||||||||||||||
Sbjct: 42280 gccctgaagtgttcctgtac 42261
to top
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 236     gagctgagtgcatcgaagac 255
               ||||||||||||||||||||
Sbjct: 1918394 gagctgagtgcatcgaagac 1918413
to top
>gb|BC015052.2| Homo sapiens Rtf1, Paf1/RNA polymerase II complex component, homolog
            (S. cerevisiae), mRNA (cDNA clone MGC:9613
            IMAGE:3909737), complete cds
          Length = 4400

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 516  aaggaacagctgagagctcc 535
            ||||||||||||||||||||
Sbjct: 3745 aaggaacagctgagagctcc 3764
to top
>gb|AC069045.11| Homo sapiens chromosome 15, clone RP11-111C2, complete sequence
          Length = 154859

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   gaacactgagctgagtgcat 248
             ||||||||||||||||||||
Sbjct: 55794 gaacactgagctgagtgcat 55813
to top
>emb|AL731853.9| Mouse DNA sequence from clone RP23-128G5 on chromosome 11 Contains the 5'
              end of the Osbp2 gene for oxysterol binding protein 2, a
              novel pseudogene, two novel genes, the Dusp18 gene for dual
              specificity phosphatase 18 and five CpG islands, complete
              sequence
          Length = 205509

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 515    gaaggaacagctgagagctc 534
              ||||||||||||||||||||
Sbjct: 173890 gaaggaacagctgagagctc 173871
to top
>emb|CR859083.1| Pongo pygmaeus mRNA; cDNA DKFZp459K1729 (from clone DKFZp459K1729)
          Length = 4428

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 516  aaggaacagctgagagctcc 535
            ||||||||||||||||||||
Sbjct: 3770 aaggaacagctgagagctcc 3789
to top
>emb|CR600802.1| full-length cDNA clone CS0DC013YK22 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 774

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 516 aaggaacagctgagagctcc 535
           ||||||||||||||||||||
Sbjct: 171 aaggaacagctgagagctcc 190
to top
>gb|AC087721.4| Homo sapiens chromosome 15 clone RP11-16O9 map 15q15, complete sequence
          Length = 196603

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 516    aaggaacagctgagagctcc 535
              ||||||||||||||||||||
Sbjct: 169411 aaggaacagctgagagctcc 169430
to top
>gb|AC182468.2| Pan troglodytes BAC clone CH251-483N21 from chromosome x, complete
             sequence
          Length = 193874

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 574   gggcttctcaacagctgcag 593
             ||||||||||||||||||||
Sbjct: 61395 gggcttctcaacagctgcag 61376
to top
>gb|AC011118.13| Homo sapiens chromosome 8, clone RP11-163D8, complete sequence
          Length = 135968

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     tgaattatctcacaccagca 63
              ||||||||||||||||||||
Sbjct: 114767 tgaattatctcacaccagca 114748
to top
>gb|AC114301.2| Homo sapiens chromosome 5 clone RP11-143L23, complete sequence
          Length = 162976

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 621   cttcatcaccaaaatccaga 640
             ||||||||||||||||||||
Sbjct: 73830 cttcatcaccaaaatccaga 73811
to top
>gb|AC110721.1| Homo sapiens chromosome 5 clone RP11-520E18, complete sequence
          Length = 164525

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 621   cttcatcaccaaaatccaga 640
             ||||||||||||||||||||
Sbjct: 24659 cttcatcaccaaaatccaga 24678
to top
>ref|XM_942999.1| PREDICTED: Homo sapiens hypothetical protein LOC647749 (LOC647749),
            mRNA
          Length = 1902

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   tgaattatctcacaccagca 63
            ||||||||||||||||||||
Sbjct: 1584 tgaattatctcacaccagca 1565
to top
>ref|XM_931168.1| PREDICTED: Homo sapiens hypothetical protein LOC642924 (LOC642924),
            mRNA
          Length = 1902

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   tgaattatctcacaccagca 63
            ||||||||||||||||||||
Sbjct: 1584 tgaattatctcacaccagca 1565
to top
>gb|AC159192.2| Mus musculus BAC clone RP24-121M18 from chromosome 13, complete sequence
          Length = 180418

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 517    aggaacagctgagagctcca 536
              ||||||||||||||||||||
Sbjct: 142737 aggaacagctgagagctcca 142718
to top
>gb|AC016583.8| Homo sapiens chromosome 5 clone CTD-2591A1, complete sequence
          Length = 184769

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    tgataaattgtgctccttga 46
             ||||||||||||||||||||
Sbjct: 99913 tgataaattgtgctccttga 99894
to top
>gb|AC000134.14| Homo sapiens Chromosome 11q13 BAC Clone 137c7, complete sequence
          Length = 203300

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   agaaccttgtctggatctaa 495
             ||||||||||||||||||||
Sbjct: 87941 agaaccttgtctggatctaa 87960
to top
>gb|AC157580.5| Mus musculus chromosome 15, clone RP24-82M3, complete sequence
          Length = 207974

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 515    gaaggaacagctgagagctc 534
              ||||||||||||||||||||
Sbjct: 120625 gaaggaacagctgagagctc 120606
to top
>emb|BX248503.7| Zebrafish DNA sequence from clone CH211-232M7 in linkage group 10,
             complete sequence
          Length = 127345

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 615   tatattcttcatcaccaaaa 634
             ||||||||||||||||||||
Sbjct: 37978 tatattcttcatcaccaaaa 37997
to top
>gb|AC009268.10| Homo sapiens chromosome 15, clone RP11-74D7, complete sequence
          Length = 162840

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   gaacactgagctgagtgcat 248
             ||||||||||||||||||||
Sbjct: 25616 gaacactgagctgagtgcat 25597
to top
>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1131G07
          Length = 133992

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    tgataaattgtgctccttga 46
             ||||||||||||||||||||
Sbjct: 96140 tgataaattgtgctccttga 96121
to top
>emb|AJ439342.1|MCR439342 Mesembryanthemum crystallinum mRNA for putative vacuolar ATPase
           subunit d (vha-d gene)
          Length = 1141

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 602 cacaacatgtgcttatattc 621
           ||||||||||||||||||||
Sbjct: 339 cacaacatgtgcttatattc 320
to top
>gb|AC002427.1|AC002427 Homo sapiens BAC clone GS1-11E15 from 5q31, complete sequence
          Length = 101098

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 621   cttcatcaccaaaatccaga 640
             ||||||||||||||||||||
Sbjct: 59537 cttcatcaccaaaatccaga 59556
to top
>gb|AC107666.13| Mus musculus chromosome 5, clone RP23-111M3, complete sequence
          Length = 230189

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    agcaagttcacatagcatca 388
              ||||||||||||||||||||
Sbjct: 126595 agcaagttcacatagcatca 126576
to top
>dbj|AP001462.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-869B15, complete
             sequence
          Length = 106886

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   agaaccttgtctggatctaa 495
             ||||||||||||||||||||
Sbjct: 20607 agaaccttgtctggatctaa 20626
to top
>dbj|AP000781.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-872D17, complete
              sequence
          Length = 190251

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    tctatacatgaagaaataaa 332
              ||||||||||||||||||||
Sbjct: 122004 tctatacatgaagaaataaa 121985
to top
>gb|AC140038.13| Mus musculus chromosome 1, clone RP24-290D14, complete sequence
          Length = 171967

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 582    caacagctgcaggctccaca 601
              ||||||||||||||||||||
Sbjct: 143550 caacagctgcaggctccaca 143569
to top
>gb|AC154793.2| Mus musculus BAC clone RP23-88B6 from chromosome 13, complete sequence
          Length = 182356

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 517   aggaacagctgagagctcca 536
             ||||||||||||||||||||
Sbjct: 14973 aggaacagctgagagctcca 14954
to top
>emb|AL627425.15| Mouse DNA sequence from clone RP23-283L16 on chromosome 4, complete
              sequence
          Length = 226967

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    agcaagttcacatagcatca 388
              ||||||||||||||||||||
Sbjct: 215525 agcaagttcacatagcatca 215544
to top
>emb|AL844854.6| Mouse DNA sequence from clone RP23-368I1 on chromosome 2, complete
             sequence
          Length = 185135

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 515   gaaggaacagctgagagctc 534
             ||||||||||||||||||||
Sbjct: 44613 gaaggaacagctgagagctc 44632
to top
>emb|AL732473.12| Mouse DNA sequence from clone RP23-130J8 on chromosome 4, complete
              sequence
          Length = 183937

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     tgaattatctcacaccagca 63
              ||||||||||||||||||||
Sbjct: 177849 tgaattatctcacaccagca 177830
to top
>dbj|AB060831.1| Macaca fascicularis brain cDNA clone:QtrA-10429, full insert sequence
          Length = 2001

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 516  aaggaacagctgagagctcc 535
            ||||||||||||||||||||
Sbjct: 1343 aaggaacagctgagagctcc 1362
to top
>dbj|D87440.2| Human mRNA for KIAA0252 gene, partial cds
          Length = 4404

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 516  aaggaacagctgagagctcc 535
            ||||||||||||||||||||
Sbjct: 3764 aaggaacagctgagagctcc 3783


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,485,996
Number of Sequences: 3902068
Number of extensions: 6485996
Number of successful extensions: 116868
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 116565
Number of HSP's gapped (non-prelim): 305
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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