ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasdp01 |
|---|---|
| Clone Library Name | barley_pub |
>RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)| Length = 261 Score = 318 bits (815), Expect = 1e-86 Identities = 162/183 (88%), Positives = 170/183 (92%), Gaps = 1/183 (0%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 Y KIRLRAEDVQG NVLTNFWGM FTTDKLRSLV+KWQTLIEAHVDVKTTD YMLR+F I Sbjct: 80 YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCI 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM NQA+SCDLKELV+KFIPEVIGKEIEKA Sbjct: 140 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGAEEVA 203 TSSIFPLQNV+VRKVKILKAPKFDLGKLMEVHGDY KED+G KLDRP DE + G +EVA Sbjct: 200 TSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYAKEDIGTKLDRPAEDEAMAG-QEVA 258 Query: 202 AAE 194 AAE Sbjct: 259 AAE 261
>RS3A_HELAN (P49198) 40S ribosomal protein S3a| Length = 259 Score = 296 bits (759), Expect = 3e-80 Identities = 148/181 (81%), Positives = 161/181 (88%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 Y KIRLRAEDVQG NVLTNFWGMD TTDKLRSLV+KWQ+LIEAHVDVKTTDN+ LRMF I Sbjct: 80 YRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMFCI 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQVKRTCYAQ+SQI+QIRRKM EIMV QA +CDLKELV KFIPE IG+EIEKA Sbjct: 140 GFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCDLKELVQKFIPESIGREIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVAA 200 TSSI+PLQNV++RKVKILKAPKFD+GKLMEVHGDY EDVGVKLDRP +E P A EV Sbjct: 200 TSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDRP-AEEAAPEATEVIG 258 Query: 199 A 197 A Sbjct: 259 A 259
>RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)| Length = 259 Score = 295 bits (756), Expect = 8e-80 Identities = 145/180 (80%), Positives = 159/180 (88%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + KIRLRAED+QG NVLTNFWGMDFTTDKLRSLVRKWQ+LIEAHVDVKTTD+Y LRMF I Sbjct: 80 FRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCI 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQ KRTCYAQ+SQIRQIRRKM EIMVNQA SCDLK+LV KFIPE IG+EIEKA Sbjct: 140 GFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVQKFIPESIGREIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVAA 200 TSSI+PLQNV++RKVKILKAPKFDLGKLMEVHGDY ED+G KLDRP + V E + A Sbjct: 200 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDIGTKLDRPAEEAVAEPTEVIGA 259
>RS3A_ARATH (Q42262) 40S ribosomal protein S3a| Length = 261 Score = 288 bits (737), Expect = 1e-77 Identities = 144/182 (79%), Positives = 157/182 (86%), Gaps = 1/182 (0%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 Y KIRLRAEDVQG NVLT FWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD Y LRMF I Sbjct: 80 YRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFCI 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 FTKRR NQVKRTCYAQ+SQIRQIRRKM EIMV +A+SCDLKELV KFIPE IG+EIEKA Sbjct: 140 AFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEAIGREIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGAEEVA 203 T I+PLQNV++RKVKILKAPKFDLGKLMEVHGDY EDVGVK+DRP + ++ E+ Sbjct: 200 TQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDVGVKVDRPADETMVEEPTEII 259 Query: 202 AA 197 A Sbjct: 260 GA 261
>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein| BIS289) Length = 261 Score = 278 bits (711), Expect = 1e-74 Identities = 143/183 (78%), Positives = 157/183 (85%), Gaps = 2/183 (1%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 Y KIRLRAEDVQG NVLT FWGMDFTTDKLRSLV+KWQTLIE+HVDVKTTDNY LR+F I Sbjct: 80 YRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDNYTLRLFCI 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMV-NQAASCDLKELVNKFIPEVIGKEIEK 383 FTKRR NQVKRTCYAQ+SQIRQIR KM EIM+ +A+SCDLKELV KFIPE IGK+IEK Sbjct: 140 AFTKRRANQVKRTCYAQSSQIRQIRSKMREIMIKEEASSCDLKELVAKFIPESIGKDIEK 199 Query: 382 ATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGAEEV 206 AT I+PLQNV++RKVKILKAPKFDL KLMEVHGDY EDVGVK+DRP DEV+ E+ Sbjct: 200 ATQGIYPLQNVFIRKVKILKAPKFDLRKLMEVHGDYTAEDVGVKVDRP-ADEVVEEPTEI 258 Query: 205 AAA 197 A Sbjct: 259 IGA 261
>RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a| Length = 247 Score = 238 bits (608), Expect = 1e-62 Identities = 121/164 (73%), Positives = 140/164 (85%), Gaps = 1/164 (0%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + KI+LRAEDVQG NVLTNFWGMDFTTDKLRSLVRKWQ+LI+AHVDVKTTDNY +R+F I Sbjct: 79 FRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHVDVKTTDNYQIRIFCI 138 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEK- 383 FTK+RPN R YAQ+SQI IRRKM EIMV +A +CDLKELV KFIPEVIGKEI++ Sbjct: 139 AFTKKRPNHT-RNFYAQSSQI-AIRRKMREIMVKEAQTCDLKELVAKFIPEVIGKEIDEW 196 Query: 382 ATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 251 + I+PLQ+ ++RKVKILKAPKFDL KLMEVHGDY E+VG K+ Sbjct: 197 RSQGIYPLQSTFIRKVKILKAPKFDLMKLMEVHGDYNEEVGAKI 240
>RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a| Length = 265 Score = 221 bits (563), Expect = 2e-57 Identities = 108/179 (60%), Positives = 137/179 (76%), Gaps = 9/179 (5%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTKRR NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA Sbjct: 140 GFTKRRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD---------YKEDVGVKLDRPDGDE 230 SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ +D G K++R DG E Sbjct: 200 CQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGTAAKATGDDTGAKVERADGYE 258
>RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformation effector| protein) Length = 265 Score = 220 bits (560), Expect = 4e-57 Identities = 107/179 (59%), Positives = 137/179 (76%), Gaps = 9/179 (5%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQV++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ +GK+IEKA Sbjct: 140 GFTKKRNNQVRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD---------YKEDVGVKLDRPDGDE 230 SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ +D G K++R DG E Sbjct: 200 CQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGGAAKASGDDTGAKVERADGYE 258
>RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a| Length = 266 Score = 219 bits (558), Expect = 7e-57 Identities = 106/180 (58%), Positives = 137/180 (76%), Gaps = 10/180 (5%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ +GK+IEKA Sbjct: 140 GFTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD----------YKEDVGVKLDRPDGDE 230 SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ + D G K++R DG E Sbjct: 200 CQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSTSAAAKPAEGDTGAKVERADGYE 259
>RS3A_XENTR (Q642T2) 40S ribosomal protein S3a| Length = 263 Score = 219 bits (558), Expect = 7e-57 Identities = 106/177 (59%), Positives = 137/177 (77%), Gaps = 7/177 (3%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 230 SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 200 CQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPAGDETGAKVERADGYE 256
>RS3A_XENLA (Q801S3) 40S ribosomal protein S3a| Length = 263 Score = 218 bits (556), Expect = 1e-56 Identities = 106/177 (59%), Positives = 136/177 (76%), Gaps = 7/177 (3%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQ+++T YAQ Q+RQIR+KM EIM + + DLKE+VNK IP+ IGK+IEKA Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMFEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 230 SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 200 CQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGTGKPAGDETGAKVERADGYE 256
>RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)| Length = 263 Score = 218 bits (556), Expect = 1e-56 Identities = 106/177 (59%), Positives = 137/177 (77%), Gaps = 7/177 (3%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMFSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTGEFQTNDLKEVVNKLIPDSIGKDIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 230 SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 200 CQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGAKVERADGYE 256
>RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a| Length = 263 Score = 218 bits (555), Expect = 2e-56 Identities = 105/177 (59%), Positives = 136/177 (76%), Gaps = 7/177 (3%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L EDVQG N L NF GMD T DK+ S+V+KWQT+IEAH+DVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLINFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCV 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQ+++T YAQ Q+RQIR+KMVEIM + + DLKE+VNK IP+ IGK+IEKA Sbjct: 140 GFTKKRTNQIRKTSYAQHQQVRQIRKKMVEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 230 SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 200 CQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGSGKPSGDETGAKVERADGYE 256
>RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a| Length = 263 Score = 218 bits (555), Expect = 2e-56 Identities = 105/177 (59%), Positives = 137/177 (77%), Gaps = 7/177 (3%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 230 SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 200 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256
>RS3A_HUMAN (P61247) 40S ribosomal protein S3a| Length = 263 Score = 218 bits (555), Expect = 2e-56 Identities = 105/177 (59%), Positives = 137/177 (77%), Gaps = 7/177 (3%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 230 SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 200 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256
>RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a| Length = 263 Score = 218 bits (555), Expect = 2e-56 Identities = 105/177 (59%), Positives = 137/177 (77%), Gaps = 7/177 (3%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 230 SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 200 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256
>RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)| Length = 260 Score = 218 bits (555), Expect = 2e-56 Identities = 105/177 (59%), Positives = 137/177 (77%), Gaps = 7/177 (3%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 77 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 136 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA Sbjct: 137 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 196 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 230 SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 197 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 253
>RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformation effector| protein) [Contains: 40S ribosomal protein S3b] Length = 263 Score = 218 bits (554), Expect = 2e-56 Identities = 105/177 (59%), Positives = 137/177 (77%), Gaps = 7/177 (3%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 230 SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 200 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVERADGYE 256
>RS3A_MOUSE (P97351) 40S ribosomal protein S3a| Length = 263 Score = 218 bits (554), Expect = 2e-56 Identities = 105/177 (59%), Positives = 137/177 (77%), Gaps = 7/177 (3%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+IEKA Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 230 SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 200 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERADGYE 256
>RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a| Length = 263 Score = 217 bits (552), Expect = 3e-56 Identities = 104/177 (58%), Positives = 137/177 (77%), Gaps = 7/177 (3%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F + Sbjct: 80 FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQ+++T YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK++EKA Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDMEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 230 SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG E Sbjct: 200 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256
>RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)| Length = 255 Score = 214 bits (546), Expect = 2e-55 Identities = 102/173 (58%), Positives = 141/173 (81%), Gaps = 1/173 (0%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 Y KI+LR ++VQG N+LTNF G+DFT+DKLRSLVRKWQ+L+EA+V VKT+D+Y+LR+FAI Sbjct: 80 YRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAI 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 FTKR+PNQ+K T YAQ+S++R+ R+KM+EI+ + ++C L +L +K IPEVIG+EIEK+ Sbjct: 140 AFTKRQPNQIKETTYAQSSKLREARKKMIEIIEREVSNCTLAQLTSKLIPEVIGREIEKS 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-YKEDVGVKLDRPDGDEVI 224 T +IFPLQNV++RKVK+LK PKFD G L+ +HG+ E+ G K+ D V+ Sbjct: 200 TQTIFPLQNVHIRKVKLLKQPKFDWGSLLALHGEGSTEEKGKKVSSGFKDVVL 252
>RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)| Length = 251 Score = 213 bits (543), Expect = 4e-55 Identities = 104/163 (63%), Positives = 132/163 (80%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K++LR ED+QG + LT+F G+ T+DKLRSLVRKWQT IEA +KTTD Y+ R+F I Sbjct: 80 FRKVKLRVEDIQGKSCLTSFNGLSITSDKLRSLVRKWQTTIEADQTIKTTDGYLCRVFVI 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFT+RR NQVK+T YAQ+SQIR IR+KM +++ NQ +SC ++ELV K IPEVIG+EIE+A Sbjct: 140 GFTRRRANQVKKTTYAQSSQIRAIRQKMFQVIQNQTSSCSMRELVQKLIPEVIGREIERA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 251 T SIFPLQNV VRKVKILKAPK D KL+E+HG+ +DVG K+ Sbjct: 200 TGSIFPLQNVLVRKVKILKAPKHDAQKLLELHGE-SQDVGTKV 241
>RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich protein KRP-A)| Length = 264 Score = 213 bits (542), Expect = 5e-55 Identities = 106/178 (59%), Positives = 137/178 (76%), Gaps = 8/178 (4%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L AE+VQG NVLTNF GM T DKL S+V+KWQTLIEA+VDVKTTD Y+LR+FAI Sbjct: 80 FRKFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTTDGYLLRVFAI 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFTK+R NQVK+TCYAQ +Q++ IR+KMVEI+ + +S D+KE+VNK IP+ IGK+IEK+ Sbjct: 140 GFTKKRNNQVKKTCYAQHAQVKAIRKKMVEIVSREVSSNDMKEVVNKLIPDSIGKDIEKS 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--------YKEDVGVKLDRPDGDE 230 I+PL +V + KVK+LK PKFD+GKLME+HG+ + G K+DR DG E Sbjct: 200 CQGIYPLHDVLIHKVKVLKKPKFDVGKLMELHGEGSTTTSKGVTSEGGEKVDRVDGYE 257
>RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)| Length = 251 Score = 209 bits (531), Expect = 9e-54 Identities = 102/163 (62%), Positives = 131/163 (80%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K++LR ED+QG + LT+F G D T+DKLRSLVRKWQ+ IEA+ +KTTD Y+ R+F I Sbjct: 80 FRKVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEANQTIKTTDGYLCRIFVI 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFT RR NQVK+T YAQ+SQIR I +KM +++ NQA C +KELV K IPEVIG+ IEKA Sbjct: 140 GFTSRRVNQVKKTTYAQSSQIRAIHQKMFQVIQNQANGCSMKELVQKLIPEVIGRAIEKA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 251 T++I+PLQNV+VRKVKILKAPK D KL+E+HG+ +DVG K+ Sbjct: 200 TNNIYPLQNVFVRKVKILKAPKHDAQKLLELHGE-SQDVGSKV 241
>RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)| Length = 254 Score = 201 bits (511), Expect = 2e-51 Identities = 96/154 (62%), Positives = 125/154 (81%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K++LR ++VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+FAI Sbjct: 80 FRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAI 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 FT+++ NQVKR YAQ+S IR IR+ + EI+ + + L +L +K IPEVI KEIE A Sbjct: 140 AFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 278 T IFPLQN++VRKVK+LK PKFD+G LM +HG+ Sbjct: 200 TKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGE 233
>RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)| Length = 254 Score = 201 bits (511), Expect = 2e-51 Identities = 97/154 (62%), Positives = 124/154 (80%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + KI+LR ++VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+FAI Sbjct: 80 FRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAI 139 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 FT+++ NQVKR YAQ+S IR IR+ + EI+ + L +L +K IPEVI KEIE A Sbjct: 140 AFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENA 199 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 278 T IFPLQN++VRKVK+LK PKFD+G LM +HG+ Sbjct: 200 TKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGE 233
>RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)| Length = 267 Score = 191 bits (486), Expect = 2e-48 Identities = 94/178 (52%), Positives = 124/178 (69%), Gaps = 8/178 (4%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K RL AEDVQ NVL NF GMD TTDK RS+V+KWQTLIEA V+ KT D Y+LR+F I Sbjct: 83 FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 142 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFT + ++TCYAQ SQ+R+IR +M +I+ N+ + DLK+LVNK + I K+IEK+ Sbjct: 143 GFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKS 202 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--------YKEDVGVKLDRPDGDE 230 I+PL +VY+RKVK+LK P+FD+ KL+E+HGD G +DRP+G E Sbjct: 203 CQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYE 260
>RS3A_CAEEL (P48154) 40S ribosomal protein S3a| Length = 256 Score = 189 bits (481), Expect = 6e-48 Identities = 96/172 (55%), Positives = 123/172 (71%), Gaps = 2/172 (1%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L AEDVQG NVLTNF M T DKL S+V+KW TLIEA+ VKTTD Y LR+F I Sbjct: 78 FRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVI 137 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 FTK+ NQVK+T Y + S+IR+IR +M+ + + CDLKE+V+K IP+ IGK+IEK Sbjct: 138 AFTKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKT 197 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--YKEDVGVKLDRPDGDE 230 S ++PLQ VY+RKVKI+K PK DLG+L ++HGD G K+DRPD E Sbjct: 198 CSKLYPLQEVYIRKVKIIKRPKVDLGRLHDLHGDSITVGADGEKVDRPDDYE 249
>RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)| Length = 268 Score = 182 bits (462), Expect = 9e-46 Identities = 89/154 (57%), Positives = 112/154 (72%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K +L AE V G +VLTNF GM TTDKLRS+V KWQTLIE VDVKTTD +MLR+F I Sbjct: 83 FRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVFCI 142 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 GFT + ++TCYAQ SQI+ IR KM I+ + S DLK +V K +P+ I K+IEKA Sbjct: 143 GFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKA 202 Query: 379 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 278 ++PL +VY+RKVK+LK P+FDL LME+HGD Sbjct: 203 CQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGD 236
>RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae| Length = 198 Score = 82.4 bits (202), Expect = 1e-15 Identities = 48/142 (33%), Positives = 73/142 (51%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K+ + DV+G N T F GM +RSLVR+ T I+ ++ T D Y LR+ A+ Sbjct: 63 HVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVMAM 122 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 RR Q SQ R IR+ M EI+ +A + K+ V + + I EI K Sbjct: 123 AIAMRR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLESVNGKIAAEIAKE 173 Query: 379 TSSIFPLQNVYVRKVKILKAPK 314 I+PL+ +RK+K+L+ P+ Sbjct: 174 AKKIYPLRKAEIRKIKVLEEPQ 195
>RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae| Length = 199 Score = 80.5 bits (197), Expect = 5e-15 Identities = 48/142 (33%), Positives = 72/142 (50%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K+ + DV+G N T F GM +RSLVR+ T I+ ++ T D Y LR+ A+ Sbjct: 65 HVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYRLRVMAM 124 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 RR Q SQ R IR+ M EI+ +A + K+ V + + I EI K Sbjct: 125 AIAMRR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKE 175 Query: 379 TSSIFPLQNVYVRKVKILKAPK 314 I+PL+ +RK+K+L P+ Sbjct: 176 GKKIYPLKKAEIRKIKVLGEPE 197
>RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae| Length = 199 Score = 80.1 bits (196), Expect = 7e-15 Identities = 48/142 (33%), Positives = 72/142 (50%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K+ + DV+G N T F GM +RSLVR+ T I+ ++ T D Y LR+ A+ Sbjct: 64 HVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMAM 123 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 RR Q SQ R IR+ M EI+ +A + K+ V + + I EI K Sbjct: 124 VIAARR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKE 174 Query: 379 TSSIFPLQNVYVRKVKILKAPK 314 I+PL+ +RK+K+L P+ Sbjct: 175 AKKIYPLKKAEIRKIKVLGEPE 196
>RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae| Length = 211 Score = 79.0 bits (193), Expect = 1e-14 Identities = 45/145 (31%), Positives = 77/145 (53%), Gaps = 4/145 (2%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K+ R DV+G + F G D +RSLVR+ + I+ +DV T D Y +R+ + Sbjct: 56 HIKVFFRIYDVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGL 115 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFI----PEVIGKE 392 FT RR A+ SQ R IR++M +++ A CD E + + + E I ++ Sbjct: 116 AFTTRR---------AKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQ 166 Query: 391 IEKATSSIFPLQNVYVRKVKILKAP 317 I++A I+P++ +RK ++L+ P Sbjct: 167 IKEAGRKIYPIRQAEIRKTEVLEEP 191
>RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae| Length = 203 Score = 78.6 bits (192), Expect = 2e-14 Identities = 47/139 (33%), Positives = 78/139 (56%) Frame = -3 Query: 733 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 554 K+ LR +V G T+ G + TTD +RS+V++ + I+A+VDVKT D Y++R+ F Sbjct: 65 KVILRINNVVGDIATTDLMGHELTTDYIRSIVKRQTSRIDANVDVKTKDGYVIRVKPTCF 124 Query: 553 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 374 T +R A++SQ++ IR MVEI+ +AA D + + + I + I + Sbjct: 125 TIKR---------ARSSQMQAIREMMVEIVKKRAAESDFETFMQEAILGRLSAAIYRQAK 175 Query: 373 SIFPLQNVYVRKVKILKAP 317 I+PL+ V +RK ++ P Sbjct: 176 FIYPLRRVEIRKTEVETIP 194
>RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae| Length = 221 Score = 78.6 bits (192), Expect = 2e-14 Identities = 40/139 (28%), Positives = 75/139 (53%) Frame = -3 Query: 733 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 554 K++ + V+G+ LT F G++ T D +RSLVRK + + A +VKT D ++R+ +G Sbjct: 74 KLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGI 133 Query: 553 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 374 T R +++ +R+KM+E +V +AA D + + + + + ++ Sbjct: 134 TTHRIGTAQKSA---------MRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAK 184 Query: 373 SIFPLQNVYVRKVKILKAP 317 I P++ V + K+K+LK P Sbjct: 185 KIAPMRKVEIAKIKVLKYP 203
>RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae| Length = 211 Score = 78.6 bits (192), Expect = 2e-14 Identities = 47/141 (33%), Positives = 74/141 (52%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 Y K+ + V G N T FW + T + L SL R+ + IE VDV T D Y LR+ ++ Sbjct: 66 YKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSV 125 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 FT RR + SQ R IR M +I+V +A+S + + + + + + EI K Sbjct: 126 VFTVRR---------CKTSQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKN 176 Query: 379 TSSIFPLQNVYVRKVKILKAP 317 I+P++ V +RK+++L P Sbjct: 177 AKKIYPIRRVEIRKIELLAEP 197
>RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae| Length = 204 Score = 73.6 bits (179), Expect = 6e-13 Identities = 43/139 (30%), Positives = 78/139 (56%) Frame = -3 Query: 733 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 554 K+ LR +V G T+ G + TTD +RS+V++ + I+A+VDV+T D +++R+ F Sbjct: 65 KVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCF 124 Query: 553 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 374 T +R A++SQ++ IR MV+I+ +A+ D + + + I + I + Sbjct: 125 TIKR---------ARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAK 175 Query: 373 SIFPLQNVYVRKVKILKAP 317 I+PL+ V +RK ++ P Sbjct: 176 FIYPLRRVEIRKTQVEAMP 194
>RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae| Length = 193 Score = 73.2 bits (178), Expect = 8e-13 Identities = 46/141 (32%), Positives = 71/141 (50%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 Y + R V+G +LT F G + + D +RSLVR+ + I+A DV T D Y+LR+ + Sbjct: 61 YVHLYFRVIGVEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGL 120 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 T R A SQ +IR+ + I+ +A+ E V + + +I + Sbjct: 121 ALTTYR---------AHRSQKTEIRKIIWNILSTRASETTFDEFVQDIVFGKLSNDIFQQ 171 Query: 379 TSSIFPLQNVYVRKVKILKAP 317 I+PL+ V V K K+LKAP Sbjct: 172 AKKIYPLRKVEVEKTKLLKAP 192
>RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae| Length = 197 Score = 70.9 bits (172), Expect = 4e-12 Identities = 45/133 (33%), Positives = 68/133 (51%) Frame = -3 Query: 712 DVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQ 533 ++ G + T F+G + + D +RSLVR+ + I A VDV T D YMLR+ + T R Sbjct: 73 NISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVVDVTTKDGYMLRVKGLVLTTYR--- 129 Query: 532 VKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQN 353 A SQ IR+ + +I +A D + V I + +I + I+PL+ Sbjct: 130 ------AHISQKTAIRKVISDITRKKAEESDFDQFVQDVIFGKLSNDIFQEAKKIYPLRK 183 Query: 352 VYVRKVKILKAPK 314 V + K K+LKAPK Sbjct: 184 VEIEKTKLLKAPK 196
>RS3A_METTH (O27630) 30S ribosomal protein S3Ae| Length = 195 Score = 70.9 bits (172), Expect = 4e-12 Identities = 42/141 (29%), Positives = 73/141 (51%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 Y K++ + + V G T F G TTD +RS++R+ + ++A V V+T D Y L++ + Sbjct: 63 YVKLKFQIDSVAGSEATTRFIGHQVTTDYVRSMIRRGTSRVDAPVIVETKDGYKLKVHPL 122 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 T RR A++SQ + +R+ + E + A+ +ELV + I EI Sbjct: 123 AITIRR---------AKSSQQKYMRQSIEEHLREIASEKTFEELVEGIVTGKIASEIYHQ 173 Query: 379 TSSIFPLQNVYVRKVKILKAP 317 I+PL+ V + K ++L+ P Sbjct: 174 AKKIYPLKRVEIIKSRVLEEP 194
>RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae| Length = 200 Score = 69.7 bits (169), Expect = 9e-12 Identities = 42/141 (29%), Positives = 68/141 (48%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K+ + DV+G N T F G +RSLVR+ T ++ ++ T D Y LR+ + Sbjct: 67 HVKLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGM 126 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 380 RR Q SQ R IR+ + +I+ +A + + V + + I EI K Sbjct: 127 VIAYRR---------IQTSQERAIRKIIQDIIYKKAEELNFADFVLQSVNGQIASEIAKE 177 Query: 379 TSSIFPLQNVYVRKVKILKAP 317 I+P++ VRK+K+L P Sbjct: 178 ARKIYPIKRAEVRKIKVLAEP 198
>RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae| Length = 213 Score = 65.9 bits (159), Expect = 1e-10 Identities = 44/167 (26%), Positives = 81/167 (48%) Frame = -3 Query: 733 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 554 K+ + +V + T F + T D LRSLVR+ + +EA++ V TTD+Y +++ + Sbjct: 62 KLTFKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAV 121 Query: 553 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 374 T ++ A ASQ + IRR M++++ A ++L++ + + I Sbjct: 122 TTKK---------ADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAK 172 Query: 373 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGD 233 I+PL+ V ++K + P+ EV + E+ V +D D D Sbjct: 173 DIYPLRRVEIKKTTLEARPE-------EVAAE--EETAVDVDEEDVD 210
>RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae| Length = 208 Score = 63.5 bits (153), Expect = 6e-10 Identities = 39/139 (28%), Positives = 73/139 (52%) Frame = -3 Query: 706 QGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVK 527 +G ++T F G + + D LRSL+R+ + I + DV T D Y++R+ + T + +Q + Sbjct: 73 EGDRLITRFVGHELSRDYLRSLIRRKSSKINSIFDVTTKDGYVVRVKGLVLTTYKCHQSQ 132 Query: 526 RTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVY 347 +T IR+ + E + +A+ + + + + EI +A I+PL+ Sbjct: 133 KTA---------IRKIINETVSKKASELSFDDFTQEVVFGRLANEIFEAAKKIYPLRKAE 183 Query: 346 VRKVKILKAPKFDLGKLME 290 + K K+LK P+ +LGK +E Sbjct: 184 IEKTKVLKVPE-NLGKQVE 201
>RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae| Length = 206 Score = 59.7 bits (143), Expect = 9e-09 Identities = 38/140 (27%), Positives = 67/140 (47%) Frame = -3 Query: 733 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 554 K+ + +DV + T F + T D RSLVR+ + + V V TTD+Y +R+ + + Sbjct: 61 KLTFQIDDVGSDSASTQFVQAELTRDYQRSLVRRGSSKVAVTVTVLTTDDYRVRIQPVAY 120 Query: 553 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 374 T ++ +Q SQ IRR M++++ + L+N I + I + Sbjct: 121 TTKQADQ---------SQQHAIRRTMIDLVEEAGEERTFEALLNSIIEGRLSSAIYDEAN 171 Query: 373 SIFPLQNVYVRKVKILKAPK 314 +I+PL+ V V K + P+ Sbjct: 172 TIYPLRRVEVEKATLEAHPE 191
>RS3A_METJA (P54059) 30S ribosomal protein S3Ae| Length = 222 Score = 58.9 bits (141), Expect = 2e-08 Identities = 36/132 (27%), Positives = 67/132 (50%) Frame = -3 Query: 709 VQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 530 V G + ++G D T + ++S +R+ ++ I+A +DVKT D + +R A+ T R N Sbjct: 80 VTGNKAIAQYYGHDTTREFMKSQIRRRRSRIDAILDVKTQDGHKIRTKAMVLTAYRANTK 139 Query: 529 KRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNV 350 +++ IR+KM EI+ A + V + + ++I+ IFP++NV Sbjct: 140 QKS---------DIRKKMEEIIKAMAKEKTFPQYVQAMLFGEMAEKIKNECKKIFPIKNV 190 Query: 349 YVRKVKILKAPK 314 + K ++L K Sbjct: 191 IIYKSEVLSLAK 202
>RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae| Length = 221 Score = 56.2 bits (134), Expect = 1e-07 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 4/145 (2%) Frame = -3 Query: 739 YXKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 560 + K+ + V+G T F G + D +R L R+ + + +V T D Y LR+ A+ Sbjct: 67 HVKMYFQVVRVEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAM 126 Query: 559 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFI----PEVIGKE 392 FT++R + SQ IR+ M EI+ +A L EL+ + + Sbjct: 127 AFTRQR---------CKTSQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSLAYL 177 Query: 391 IEKATSSIFPLQNVYVRKVKILKAP 317 I+++ I+PL+ V + K K+L P Sbjct: 178 IDESARKIYPLRKVEIAKSKLLWVP 202
>RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae| Length = 215 Score = 55.5 bits (132), Expect = 2e-07 Identities = 40/150 (26%), Positives = 70/150 (46%) Frame = -3 Query: 733 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 554 K R + +G T F G D +R LVR+ + I+ DVKT+DN ++ + + Sbjct: 66 KALFRITNCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSIITVKIVVV 125 Query: 553 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 374 T + K+ QIR+ + + ++N+ S E V I + I ++ AT Sbjct: 126 TDGKVTNTKKF---------QIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMISATK 176 Query: 373 SIFPLQNVYVRKVKILKAPKFDLGKLMEVH 284 I+PL+ + VRK +++ L + E+H Sbjct: 177 DIYPLKKIEVRKSELV-----SLSGISEIH 201
>RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae| Length = 215 Score = 45.4 bits (106), Expect = 2e-04 Identities = 38/177 (21%), Positives = 75/177 (42%) Frame = -3 Query: 733 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 554 K R +G T F G D +R LVR+ + I+ DVKT+D ++ + + Sbjct: 66 KALFRITGCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDGSIITVKIVVV 125 Query: 553 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 374 + + K++ +IR+ + +V++ + + V I + ++ +AT Sbjct: 126 SDGKLTNTKKS---------EIRKALTSFIVSKGSQLSYADFVRYLIGDDSYNDMVEATK 176 Query: 373 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVA 203 +I+PL+ + +RK +L+ + G + P +E PG E +A Sbjct: 177 NIYPLRKIEIRK-----------SELVSLSG---------MQEPQKNEPAPGGEAIA 213
>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae| Length = 209 Score = 44.3 bits (103), Expect = 4e-04 Identities = 29/132 (21%), Positives = 59/132 (44%) Frame = -3 Query: 721 RAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 542 R ++ G T F G + D +R +VR+ + I+ + KT D Y L + + + + Sbjct: 69 RVKECTGKRCTTEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRLVIKIVLVSDSK 128 Query: 541 PNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFP 362 KR ++R K++ + + S L EL I + + +I ++P Sbjct: 129 LTANKRG---------EVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYP 179 Query: 361 LQNVYVRKVKIL 326 ++ + +RK ++L Sbjct: 180 IKKIEIRKSEVL 191 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,482,469 Number of Sequences: 219361 Number of extensions: 1801268 Number of successful extensions: 4950 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 4769 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4928 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7762912789 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
