>emb|AJ222776.1|HVJ222776 Hordeum vulgare mRNA for hypothetical protein (ORF1), clone RG28
          Length = 397

 Score =  236 bits (119), Expect = 5e-59
 Identities = 133/135 (98%), Gaps = 2/135 (1%)
 Strand = Plus / Minus

                                                                       
Query: 292 cgccacatgttatcacatcac-aaatttgaccattccagtccctcttgatttc-tcccca 349
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 397 cgccacatgttatcacatcaccaaatttgaccattccagtccctcttgatttcctcccca 338

                                                                       
Query: 350 agccgtgctcactccagggatagtttggccattgtcaaggccagcatctgaaccccgttt 409
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agccgtgctcactccagggatagtttggccattgtcaaggccagcatctgaaccccgttt 278

                          
Query: 410 gccatgtcctcctgc 424
           |||||||||||||||
Sbjct: 277 gccatgtcctcctgc 263

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                            
Query: 356      gctcactccagggatagtttggccattgtcaaggccagcatctgaaccccgtttgccatg 415
                ||||||| |||||||| | ||||||||| |||||| |||| ||  || ||||| ||||||
Sbjct: 25121027 gctcactgcagggataatctggccattgccaaggcaagcaccttcacaccgttcgccatg 25121086

                     
Query: 416      tcctc 420
                |||||
Sbjct: 25121087 tcctc 25121091

>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 121563

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                         
Query: 356   gctcactccagggatagtttggccattgtcaaggccagcatctgaaccccgtttgccatg 415
             ||||||| |||||||| | ||||||||| |||||| |||| ||  || ||||| ||||||
Sbjct: 10452 gctcactgcagggataatctggccattgccaaggcaagcaccttcacaccgttcgccatg 10393

                  
Query: 416   tcctc 420
             |||||
Sbjct: 10392 tcctc 10388

>dbj|AK103799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033146A10, full
            insert sequence
          Length = 1604

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 356  gctcactccagggatagtttggccattgtcaaggccagcatctgaaccccgtttgccatg 415
            ||||||| |||||||| | ||||||||| |||||| |||| ||  || ||||| ||||||
Sbjct: 1261 gctcactgcagggataatctggccattgccaaggcaagcaccttcacaccgttcgccatg 1202

                 
Query: 416  tcctc 420
            |||||
Sbjct: 1201 tcctc 1197

>dbj|AK101904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071E01, full
            insert sequence
          Length = 1768

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 356  gctcactccagggatagtttggccattgtcaaggccagcatctgaaccccgtttgccatg 415
            ||||||| |||||||| | ||||||||| |||||| |||| ||  || ||||| ||||||
Sbjct: 1496 gctcactgcagggataatctggccattgccaaggcaagcaccttcacaccgttcgccatg 1437

                 
Query: 416  tcctc 420
            |||||
Sbjct: 1436 tcctc 1432

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                            
Query: 356      gctcactccagggatagtttggccattgtcaaggccagcatctgaaccccgtttgccatg 415
                ||||||| |||||||| | ||||||||| |||||| |||| ||  || ||||| ||||||
Sbjct: 25049203 gctcactgcagggataatctggccattgccaaggcaagcaccttcacaccgttcgccatg 25049262

                     
Query: 416      tcctc 420
                |||||
Sbjct: 25049263 tcctc 25049267

>emb|AL731743.2|CNS08C7S Oryza sativa chromosome 12, . BAC OSJNBa0001B02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 93872

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                         
Query: 356   gctcactccagggatagtttggccattgtcaaggccagcatctgaaccccgtttgccatg 415
             ||||||| |||||||| | ||||||||| |||||| |||| ||  || ||||| ||||||
Sbjct: 80036 gctcactgcagggataatctggccattgccaaggcaagcaccttcacaccgttcgccatg 79977

                  
Query: 416   tcctc 420
             |||||
Sbjct: 79976 tcctc 79972

>emb|X98238.1|LSEXOGC L.sake gene cluster
          Length = 7047

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 59   caattaatccttcaataaagtt 80
            ||||||||||||||||||||||
Sbjct: 1032 caattaatccttcaataaagtt 1011

>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 59     caattaatccttcaataaagtt 80
              ||||||||||||||||||||||
Sbjct: 322925 caattaatccttcaataaagtt 322904

>gb|AC105225.5| Homo sapiens chromosome 8, clone RP11-775E18, complete sequence
          Length = 135609

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 50    catgacaaccaattaatccttcaat 74
             |||||||||| ||||||||||||||
Sbjct: 65459 catgacaacccattaatccttcaat 65435

>gb|AC015599.5|AC015599 Homo sapiens chromosome , clone RP11-45B19, complete sequence
          Length = 162607

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 50    catgacaaccaattaatccttcaat 74
             |||||||||| ||||||||||||||
Sbjct: 45368 catgacaacccattaatccttcaat 45344

>gb|AC004099.1|AC004099 Homo sapiens chromosome 17, clone HCIT421K24, complete sequence
          Length = 136222

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    tagattttccttgttcatgac 55
             |||||||||||||||||||||
Sbjct: 13274 tagattttccttgttcatgac 13294

>gb|AC111196.4| Homo sapiens BAC clone RP11-585K17 from 4, complete sequence
          Length = 35191

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 325  tccagtccctcttgatttctcccc 348
            ||||||||||||| ||||||||||
Sbjct: 5363 tccagtccctcttcatttctcccc 5386

>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 177     ctatgtttttctggttatgc 196
               ||||||||||||||||||||
Sbjct: 2344442 ctatgtttttctggttatgc 2344461

>emb|BX248500.13| Zebrafish DNA sequence from clone DKEY-47A21, complete sequence
          Length = 230877

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 161  ttatgttctgttattactatgttt 184
            |||||||||||||||| |||||||
Sbjct: 4378 ttatgttctgttattaatatgttt 4355

>emb|BX511178.6| Zebrafish DNA sequence from clone DKEY-221H15 in linkage group 20,
              complete sequence
          Length = 187362

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 158    ttattatgttctgttattactatg 181
              ||||||||||||||||||| ||||
Sbjct: 131866 ttattatgttctgttattaatatg 131889

>gb|AC005746.1|AC005746 Homo sapiens chromosome 17, clone hRPK.332_H_18, complete sequence
          Length = 189356

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    gttattactatgtttttctg 189
              ||||||||||||||||||||
Sbjct: 118352 gttattactatgtttttctg 118333


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,225,446
Number of Sequences: 3902068
Number of extensions: 4225446
Number of successful extensions: 71515
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71461
Number of HSP's gapped (non-prelim): 52
length of query: 425
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 403
effective length of database: 17,147,199,772
effective search space: 6910321508116
effective search space used: 6910321508116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)