Clone Name | rbasdo05 |
---|---|
Clone Library Name | barley_pub |
>gb|AY851657.1| Triticum aestivum small GTP-binding protein (rab2) mRNA, complete cds Length = 824 Score = 886 bits (447), Expect = 0.0 Identities = 547/579 (94%), Gaps = 1/579 (0%) Strand = Plus / Minus Query: 142 tccataggtgcgtgaaataacaaagcaccctggagttacaatcactcggcgactcgaaat 201 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 824 tccataggcgcgtgaaataacaaagcaccctggagttacaatcactcggcaactcgaaat 765 Query: 202 aatgcaacaggtattgtaacacatgccatgcaattctgtacatcattcatcatggaacgt 261 |||| |||||||||||||||||||||||||| ||| ||||||||||| |||||||| | Sbjct: 764 aatgtaacaggtattgtaacacatgccatgcgattttgtacatcattgatcatggattgc 705 Query: 262 tccattaaccgcagcagctgccaccttgggaagatgaggcaccaccacctccagcttggc 321 ||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 704 tccattagccgcagcagctgccaccttgggaagacgaggcaccagcacctccagcttggc 645 Query: 322 caggaactgcatagccaactttgattccatacgactcattagatacatcaaagacaccat 381 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 644 caggaactgcatagccaactttgattccataggactcattagatacatcaaagacaccat 585 Query: 382 cctgaattttcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtg 441 ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 584 cctgaattttcttgtatattgctccagcagtcttgacaaagccctcctcgacattttgtg 525 Query: 442 cagtttttgcagatgcctccatgaagatgagaccattctccttggcgaactgctcacctt 501 |||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||| Sbjct: 524 cagtttttgcagatgcctccataaagatgagaccattctccttggcaaactgctcgcctt 465 Query: 502 cctcgaagctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcg 561 ||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| || | Sbjct: 464 cctcgaagctcacggcacgcctatgggataggtcacatttgtttccaactagcattattg 405 Query: 562 tcatgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacg 621 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct: 404 tcatgttggcatttgcatgttgccttgcatcttccagccagcttgcaagatgattaaagg 345 Query: 622 tttccctcctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatc 681 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 344 tttccctcctggtgatgtcataaaccaaaagagcaccagcagctcccctgtagtatgatc 285 Query: 682 tagttatcgatctgaatgattcttggcctggccgtgtcc 720 ||||||||||||||||||| || |||||| ||||||||| Sbjct: 284 tagttatcgatctgaatgactcctggcct-gccgtgtcc 247
>gb|AF083256.1|AF083256 Sporobolus stapfianus small GTP binding protein Rab2 mRNA, complete cds Length = 999 Score = 375 bits (189), Expect = e-100 Identities = 330/377 (87%) Strand = Plus / Minus Query: 333 tagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaattttc 392 ||||||||||||||||| | |||||||| || ||||| |||| ||||| || |||||| Sbjct: 650 tagccaactttgattccgttggactcattggaaacatcgaagatgccatcttggattttc 591 Query: 393 ttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagtttttgca 452 || ||||||| |||||||||||||| || ||||||| ||||||||||||||||| ||| Sbjct: 590 ttgtatattgttccagcagtcttgatgaaagcctcctcaacgttttgtgcagttttggca 531 Query: 453 gatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaagctc 512 ||||||||||| || | ||||||| ||||||||||||||| ||||||||||| |||| Sbjct: 530 gatgcctccataaaaaccagaccatgctccttggcgaactgttcaccttcctcatagctg 471 Query: 513 acagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgttagca 572 |||||||| || ||||| || ||||| |||||||||| ||||||| |||||||||||| Sbjct: 470 acagcacgcctgtgagacagatcacatttgtttccaatcagcatgactgtcatgttagca 411 Query: 573 tttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctcctg 632 ||||| || |||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 410 tttgcatgctgccttgcatcttccagccagcttgcaagatgattaaatgtctccctcctg 351 Query: 633 gtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatcgat 692 |||||||| |||||||| || |||||||| ||||| |||||||||||||||||||| ||| Sbjct: 350 gtgatgtcataaaccaacagggcaccagcagctcctctgtagtatgatctagttatagat 291 Query: 693 ctgaatgattcttggcc 709 ||||||||||| ||||| Sbjct: 290 ctgaatgattcctggcc 274
>gb|U22432.1|ZMU22432 Zea mays clone Zm-Rab2-A GTP binding protein (rab2) mRNA, complete cds Length = 995 Score = 375 bits (189), Expect = e-100 Identities = 351/405 (86%) Strand = Plus / Minus Query: 302 accaccacctccagcttggccaggaactgcatagccaactttgattccatacgactcatt 361 |||| ||||||||| ||||||||| ||| |||| ||||||||||| ||||| |||||||| Sbjct: 683 accagcacctccagattggccagggactacatatccaactttgatcccataagactcatt 624 Query: 362 agatacatcaaagacaccatcctgaattttcttatatattgctccagcagtcttgacaaa 421 ||||||||| || || ||||| || |||||||| || ||||||||||||||||| ||||| Sbjct: 623 agatacatcgaaaacgccatcttggattttcttgtagattgctccagcagtcttaacaaa 564 Query: 422 gccctcctcgacgttttgtgcagtttttgcagatgcctccatgaagatgagaccattctc 481 |||||||||| || || || || |||||||| |||||||||||||| ||||||| || Sbjct: 563 tgcctcctcgacattctgcgcggtctttgcagaggcctccatgaagataagaccatgttc 504 Query: 482 cttggcgaactgctcaccttcctcgaagctcacagcacgtctatgagataggtcacactt 541 ||| ||||||||||| |||||||| ||||||| ||||| || ||||| || |||||||| Sbjct: 503 ctttgcgaactgctcgccttcctcatagctcactgcacgcctgtgagacagatcacactt 444 Query: 542 gtttccaactagcatgatcgtcatgttagcatttgcgtgttgccttgcatcttccagcca 601 || ||||| ||||| ||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct: 443 attcccaacaagcattatcgtcatgttagcattcgcgtgctgccttgcatcctccagcca 384 Query: 602 gcttgcaagatgattaaacgtttccctcctggtgatgtcgtaaaccaaaagagcaccagc 661 ||||||||| ||||| || || |||||||| ||||| || || ||||||||||||||||| Sbjct: 383 gcttgcaaggtgattgaaagtctccctcctagtgatatcatagaccaaaagagcaccagc 324 Query: 662 ggctcccctgtagtatgatctagttatcgatctgaatgattcttg 706 ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 323 agctcctctgtagtatgatctagttatggatctgaatgactcttg 279 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 aaataacaaagcaccctggag 176 ||||||||||||||||||||| Sbjct: 817 aaataacaaagcaccctggag 797
>gb|AY103978.1| Zea mays PCO103210 mRNA sequence Length = 1137 Score = 369 bits (186), Expect = 9e-99 Identities = 350/405 (86%) Strand = Plus / Minus Query: 302 accaccacctccagcttggccaggaactgcatagccaactttgattccatacgactcatt 361 |||| ||||||||| ||||||||| ||| |||| ||||||||||| ||||| |||||||| Sbjct: 787 accagcacctccagattggccagggactacatatccaactttgatcccataagactcatt 728 Query: 362 agatacatcaaagacaccatcctgaattttcttatatattgctccagcagtcttgacaaa 421 ||||||||| || || ||||| || |||||||| || ||||||||||||||||| ||||| Sbjct: 727 agatacatcgaaaacgccatcttggattttcttgtagattgctccagcagtcttaacaaa 668 Query: 422 gccctcctcgacgttttgtgcagtttttgcagatgcctccatgaagatgagaccattctc 481 |||||||||| || || || || |||||||| |||||||||||||| ||||||| || Sbjct: 667 tgcctcctcgacattctgcgcggtctttgcagaggcctccatgaagataagaccatgttc 608 Query: 482 cttggcgaactgctcaccttcctcgaagctcacagcacgtctatgagataggtcacactt 541 ||| ||||||||||| |||||||| ||||||| ||||| || ||||| || |||||||| Sbjct: 607 ctttgcgaactgctcgccttcctcatagctcactgcacgcctgtgagacagatcacactt 548 Query: 542 gtttccaactagcatgatcgtcatgttagcatttgcgtgttgccttgcatcttccagcca 601 || || || ||||| ||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct: 547 attcccnacaagcattatcgtcatgttagcattcgcgtgctgccttgcatcctccagcca 488 Query: 602 gcttgcaagatgattaaacgtttccctcctggtgatgtcgtaaaccaaaagagcaccagc 661 ||||||||| ||||| || || |||||||| ||||| || || ||||||||||||||||| Sbjct: 487 gcttgcaaggtgattgaaagtctccctcctagtgatatcatagaccaaaagagcaccagc 428 Query: 662 ggctcccctgtagtatgatctagttatcgatctgaatgattcttg 706 ||||| |||||||||||||||||||| ||||||||||| ||||| Sbjct: 427 agctcctctgtagtatgatctagttatggatctgaatgactcttg 383 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 aaataacaaagcaccctggag 176 ||||||||||||||||||||| Sbjct: 923 aaataacaaagcaccctggag 903
>ref|XM_472821.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 636 Score = 359 bits (181), Expect = 8e-96 Identities = 383/449 (85%), Gaps = 1/449 (0%) Strand = Plus / Minus Query: 272 gcagcagctgccaccttgggaagatgaggcaccaccacctccagcttggccaggaactgc 331 |||||||| || ||||| ||||| |||| |||| ||||||| | |||||| || || | Sbjct: 627 gcagcagccacccccttgagaagacgaggaaccagcacctccggattggcccgggaccgt 568 Query: 332 atagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaatttt 391 || |||| ||||||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 567 gtaaccaagtttgattccattagcctcattagataaatcaaagacaccatcttgaatttt 508 Query: 392 cttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagtttttgc 451 ||| |||||||||||||||||||||||||| ||||||| || || || || |||||||| Sbjct: 507 cttgtatattgctccagcagtcttgacaaaagcctcctcaacattctgcgcggtttttgc 448 Query: 452 agatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaagct 511 ||| |||||||| || || ||||| | ||| || || |||||||| |||||||| |||| Sbjct: 447 agacgcctccataaatatcagaccgtgctcttttgcaaactgctcgccttcctcatagct 388 Query: 512 cacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgttagc 571 ||||||||| ||||||||||| ||| | || |||||||| ||||| || ||||||||||| Sbjct: 387 cacagcacgcctatgagatagatcagatttatttccaacaagcattattgtcatgttagc 328 Query: 572 atttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctcct 631 ||| || |||||||||||||||||||||||||| ||||||||||| || || |||||||| Sbjct: 327 attcgcatgttgccttgcatcttccagccagctcgcaagatgattgaatgtctccctcct 268 Query: 632 ggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatcga 691 || ||||| ||||||||||||||||| || || || |||||||| |||||||||||||| Sbjct: 267 tgtaatgtcataaaccaaaagagcaccggcagcccctctgtagtacgatctagttatcga 208 Query: 692 tctgaatgattcttggcctggccgtgtcc 720 ||||||||| || |||||| ||||||||| Sbjct: 207 tctgaatgactcctggcct-gccgtgtcc 180
>dbj|AK059799.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F05, full insert sequence Length = 1023 Score = 359 bits (181), Expect = 8e-96 Identities = 383/449 (85%), Gaps = 1/449 (0%) Strand = Plus / Minus Query: 272 gcagcagctgccaccttgggaagatgaggcaccaccacctccagcttggccaggaactgc 331 |||||||| || ||||| ||||| |||| |||| ||||||| | |||||| || || | Sbjct: 766 gcagcagccacccccttgagaagacgaggaaccagcacctccggattggcccgggaccgt 707 Query: 332 atagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaatttt 391 || |||| ||||||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 706 gtaaccaagtttgattccattagcctcattagataaatcaaagacaccatcttgaatttt 647 Query: 392 cttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagtttttgc 451 ||| |||||||||||||||||||||||||| ||||||| || || || || |||||||| Sbjct: 646 cttgtatattgctccagcagtcttgacaaaagcctcctcaacattctgcgcggtttttgc 587 Query: 452 agatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaagct 511 ||| |||||||| || || ||||| | ||| || || |||||||| |||||||| |||| Sbjct: 586 agacgcctccataaatatcagaccgtgctcttttgcaaactgctcgccttcctcatagct 527 Query: 512 cacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgttagc 571 ||||||||| ||||||||||| ||| | || |||||||| ||||| || ||||||||||| Sbjct: 526 cacagcacgcctatgagatagatcagatttatttccaacaagcattattgtcatgttagc 467 Query: 572 atttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctcct 631 ||| || |||||||||||||||||||||||||| ||||||||||| || || |||||||| Sbjct: 466 attcgcatgttgccttgcatcttccagccagctcgcaagatgattgaatgtctccctcct 407 Query: 632 ggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatcga 691 || ||||| ||||||||||||||||| || || || |||||||| |||||||||||||| Sbjct: 406 tgtaatgtcataaaccaaaagagcaccggcagcccctctgtagtacgatctagttatcga 347 Query: 692 tctgaatgattcttggcctggccgtgtcc 720 ||||||||| || |||||| ||||||||| Sbjct: 346 tctgaatgactcctggcct-gccgtgtcc 319
>emb|AJ518934.1|HVU518934 Hordeum vulgare subsp. vulgare mRNA for RAB-like small G-protein (rab2 gene) Length = 668 Score = 349 bits (176), Expect = 8e-93 Identities = 329/380 (86%) Strand = Plus / Minus Query: 330 gcatagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaatt 389 ||||| ||||||||||| || || |||||||||||||||||||| |||||||| || ||| Sbjct: 572 gcatacccaactttgataccgtaggactcattagatacatcaaaaacaccatcttggatt 513 Query: 390 ttcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagttttt 449 ||||| ||||||| |||||| ||||| | || ||||||| || |||||||| |||||| Sbjct: 512 ttcttgtatattgttccagccgtcttaatgaatgcctcctcaacattttgtgctgttttt 453 Query: 450 gcagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaag 509 |||||||||||||| |||| ||||||| ||||||||||||||| ||| | ||||| || Sbjct: 452 gcagatgcctccataaagactagaccatgctccttggcgaactgttcaacctcctcatag 393 Query: 510 ctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgtta 569 || ||||| ||||||||||| || ||||| |||||||||| |||||| | ||||| || Sbjct: 392 ctgacagcccgtctatgagacagatcacatttgtttccaattagcatcactgtcatattg 333 Query: 570 gcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctc 629 ||||||||||| || ||||||||||| |||||||| |||||||| ||||| ||||||||| Sbjct: 332 gcatttgcgtgctgtcttgcatcttctagccagctcgcaagatggttaaaagtttccctc 273 Query: 630 ctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatc 689 |||||||| || |||||||||||||||||||| || || |||||||||||||| ||||| Sbjct: 272 ctggtgatatcataaaccaaaagagcaccagcagcacctctgtagtatgatcttgttata 213 Query: 690 gatctgaatgattcttggcc 709 |||||||||||||||||||| Sbjct: 212 gatctgaatgattcttggcc 193
>ref|XM_466431.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1109 Score = 343 bits (173), Expect = 5e-91 Identities = 326/377 (86%) Strand = Plus / Minus Query: 330 gcatagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaatt 389 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 727 gcatagccaactttgatcccataagactcattagatacatcaaagacaccatcttggatt 668 Query: 390 ttcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagttttt 449 ||||| || |||| |||||||||||||| || ||||||| || ||||||||||||||| Sbjct: 667 ttcttgtaaattgttccagcagtcttgatgaatgcctcctcaacattttgtgcagttttt 608 Query: 450 gcagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaag 509 |||||||||||||| || | || |||| ||||||||| || || ||||||||||| || Sbjct: 607 gcagatgcctccataaatactaggccatgctccttggcaaattgttcaccttcctcatag 548 Query: 510 ctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgtta 569 || ||||||||||||||||| || ||||| ||||| |||| ||||| | |||||||| Sbjct: 547 ctgacagcacgtctatgagacagatcacatttgttaccaataagcattactgtcatgttg 488 Query: 570 gcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctc 629 |||||||| || || ||||||||||| |||||||| |||||||||||||| || || ||| Sbjct: 487 gcatttgcatgctgtcttgcatcttctagccagctagcaagatgattaaaagtctctctc 428 Query: 630 ctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatc 689 |||||||| || || |||||||| |||||||| || ||||||||||||||||||||||| Sbjct: 427 ctggtgatatcatacaccaaaagggcaccagcagcacccctgtagtatgatctagttata 368 Query: 690 gatctgaatgattcttg 706 |||||||| |||||||| Sbjct: 367 gatctgaacgattcttg 351
>ref|XM_506841.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0056I22.32 mRNA Length = 1110 Score = 343 bits (173), Expect = 5e-91 Identities = 326/377 (86%) Strand = Plus / Minus Query: 330 gcatagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaatt 389 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 728 gcatagccaactttgatcccataagactcattagatacatcaaagacaccatcttggatt 669 Query: 390 ttcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagttttt 449 ||||| || |||| |||||||||||||| || ||||||| || ||||||||||||||| Sbjct: 668 ttcttgtaaattgttccagcagtcttgatgaatgcctcctcaacattttgtgcagttttt 609 Query: 450 gcagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaag 509 |||||||||||||| || | || |||| ||||||||| || || ||||||||||| || Sbjct: 608 gcagatgcctccataaatactaggccatgctccttggcaaattgttcaccttcctcatag 549 Query: 510 ctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgtta 569 || ||||||||||||||||| || ||||| ||||| |||| ||||| | |||||||| Sbjct: 548 ctgacagcacgtctatgagacagatcacatttgttaccaataagcattactgtcatgttg 489 Query: 570 gcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctc 629 |||||||| || || ||||||||||| |||||||| |||||||||||||| || || ||| Sbjct: 488 gcatttgcatgctgtcttgcatcttctagccagctagcaagatgattaaaagtctctctc 429 Query: 630 ctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatc 689 |||||||| || || |||||||| |||||||| || ||||||||||||||||||||||| Sbjct: 428 ctggtgatatcatacaccaaaagggcaccagcagcacccctgtagtatgatctagttata 369 Query: 690 gatctgaatgattcttg 706 |||||||| |||||||| Sbjct: 368 gatctgaacgattcttg 352
>dbj|AK100102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004J08, full insert sequence Length = 1109 Score = 343 bits (173), Expect = 5e-91 Identities = 326/377 (86%) Strand = Plus / Minus Query: 330 gcatagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaatt 389 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 727 gcatagccaactttgatcccataagactcattagatacatcaaagacaccatcttggatt 668 Query: 390 ttcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagttttt 449 ||||| || |||| |||||||||||||| || ||||||| || ||||||||||||||| Sbjct: 667 ttcttgtaaattgttccagcagtcttgatgaatgcctcctcaacattttgtgcagttttt 608 Query: 450 gcagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaag 509 |||||||||||||| || | || |||| ||||||||| || || ||||||||||| || Sbjct: 607 gcagatgcctccataaatactaggccatgctccttggcaaattgttcaccttcctcatag 548 Query: 510 ctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgtta 569 || ||||||||||||||||| || ||||| ||||| |||| ||||| | |||||||| Sbjct: 547 ctgacagcacgtctatgagacagatcacatttgttaccaataagcattactgtcatgttg 488 Query: 570 gcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctc 629 |||||||| || || ||||||||||| |||||||| |||||||||||||| || || ||| Sbjct: 487 gcatttgcatgctgtcttgcatcttctagccagctagcaagatgattaaaagtctctctc 428 Query: 630 ctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatc 689 |||||||| || || |||||||| |||||||| || ||||||||||||||||||||||| Sbjct: 427 ctggtgatatcatacaccaaaagggcaccagcagcacccctgtagtatgatctagttata 368 Query: 690 gatctgaatgattcttg 706 |||||||| |||||||| Sbjct: 367 gatctgaacgattcttg 351
>dbj|AK061099.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A09, full insert sequence Length = 1110 Score = 343 bits (173), Expect = 5e-91 Identities = 326/377 (86%) Strand = Plus / Minus Query: 330 gcatagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaatt 389 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 728 gcatagccaactttgatcccataagactcattagatacatcaaagacaccatcttggatt 669 Query: 390 ttcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagttttt 449 ||||| || |||| |||||||||||||| || ||||||| || ||||||||||||||| Sbjct: 668 ttcttgtaaattgttccagcagtcttgatgaatgcctcctcaacattttgtgcagttttt 609 Query: 450 gcagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaag 509 |||||||||||||| || | || |||| ||||||||| || || ||||||||||| || Sbjct: 608 gcagatgcctccataaatactaggccatgctccttggcaaattgttcaccttcctcatag 549 Query: 510 ctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgtta 569 || ||||||||||||||||| || ||||| ||||| |||| ||||| | |||||||| Sbjct: 548 ctgacagcacgtctatgagacagatcacatttgttaccaataagcattactgtcatgttg 489 Query: 570 gcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctc 629 |||||||| || || ||||||||||| |||||||| |||||||||||||| || || ||| Sbjct: 488 gcatttgcatgctgtcttgcatcttctagccagctagcaagatgattaaaagtctctctc 429 Query: 630 ctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatc 689 |||||||| || || |||||||| |||||||| || ||||||||||||||||||||||| Sbjct: 428 ctggtgatatcatacaccaaaagggcaccagcagcacccctgtagtatgatctagttata 369 Query: 690 gatctgaatgattcttg 706 |||||||| |||||||| Sbjct: 368 gatctgaacgattcttg 352
>gb|U22433.1|ZMU22433 Zea mays clone Zm-Rab2-B GTP binding protein (rab2) mRNA, complete cds Length = 1038 Score = 339 bits (171), Expect = 8e-90 Identities = 369/435 (84%) Strand = Plus / Minus Query: 272 gcagcagctgccaccttgggaagatgaggcaccaccacctccagcttggccaggaactgc 331 |||||||| |||||||| ||||| ||| |||| ||||||||| ||| ||||| | ||| Sbjct: 735 gcagcagccaccaccttgagaagacgagctaccagcacctccagattgcccagggattgc 676 Query: 332 atagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaatttt 391 ||| ||||||||||||||||| ||||||||||||||||| || |||||||| ||||| || Sbjct: 675 atatccaactttgattccataggactcattagatacatcgaaaacaccatcttgaatctt 616 Query: 392 cttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagtttttgc 451 ||| || ||||||||||||||||| ||||| |||||||||| || ||||| || || || Sbjct: 615 cttgtagattgctccagcagtcttaacaaatgcctcctcgacattctgtgcggtcttcgc 556 Query: 452 agatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaagct 511 ||| || ||||||||||| ||||||| || || || |||||||| |||||||| |||| Sbjct: 555 agaggcttccatgaagataagaccatgttcttttgcaaactgctcgccttcctcatagct 496 Query: 512 cacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgttagc 571 ||| ||||| || ||||| || || |||||||| ||||| ||||| || ||||||||||| Sbjct: 495 caccgcacgcctgtgagacagatcgcacttgttcccaacaagcattattgtcatgttagc 436 Query: 572 atttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctcct 631 ||| ||||| || || ||||| ||||||||||||||||| || || || || |||||||| Sbjct: 435 attggcgtgctgtctcgcatcctccagccagcttgcaaggtggttgaaagtctccctcct 376 Query: 632 ggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatcga 691 || ||||| |||||||||||||||||||| || || |||||||||||||||||||| || Sbjct: 375 agttatgtcataaaccaaaagagcaccagcagcgcctctgtagtatgatctagttatgga 316 Query: 692 tctgaatgattcttg 706 ||||||||| ||||| Sbjct: 315 tctgaatgactcttg 301 Score = 48.1 bits (24), Expect = 0.040 Identities = 33/36 (91%) Strand = Plus / Minus Query: 141 atccataggtgcgtgaaataacaaagcaccctggag 176 |||||| ||||||| ||||||||| ||||||||||| Sbjct: 853 atccattggtgcgtcaaataacaaggcaccctggag 818
>gb|L35845.1|RICGTPBP Oryza sativa small GTP-binding protein (ORRab-2) mRNA, complete cds Length = 1027 Score = 319 bits (161), Expect = 7e-84 Identities = 324/377 (85%), Gaps = 1/377 (0%) Strand = Plus / Minus Query: 330 gcatagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaatt 389 |||||||||||||||| ||||| ||||||||||||||||||||||||||| | || ||| Sbjct: 669 gcatagccaactttgac-ccataagactcattagatacatcaaagacaccaccttggatt 611 Query: 390 ttcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagttttt 449 ||||| || |||| |||||||||||||| || ||||||| || ||||||||||||||| Sbjct: 610 ttcttgtaaattgttccagcagtcttgatgaatgcctcctcaacattttgtgcagttttt 551 Query: 450 gcagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaag 509 |||||||||||||| || | || |||| ||||||||| || || ||||||||||| || Sbjct: 550 gcagatgcctccataaatactaggccatgctccttggcaaattgttcaccttcctcatag 491 Query: 510 ctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgtta 569 || ||||||||||||||||| || ||||| ||||| |||| ||||| | |||||||| Sbjct: 490 ctgacagcacgtctatgagacagatcacatttgttaccaataagcattactgtcatgttg 431 Query: 570 gcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctc 629 |||||||| || || ||||||||||| |||||||| |||||||||||||| || || ||| Sbjct: 430 gcatttgcatgctgtcttgcatcttctagccagctagcaagatgattaaaagtctctctc 371 Query: 630 ctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatc 689 |||||||| || || |||||||| |||||||| || ||||||||||||||||||||||| Sbjct: 370 ctggtgatatcatacaccaaaagggcaccagcagcacccctgtagtatgatctagttata 311 Query: 690 gatctgaatgattcttg 706 |||||||| |||||||| Sbjct: 310 gatctgaacgattcttg 294
>gb|AY104330.1| Zea mays PCO103212 mRNA sequence Length = 1129 Score = 305 bits (154), Expect = 1e-79 Identities = 328/386 (84%) Strand = Plus / Minus Query: 324 ggaactgcatagccaactttgattccatacgactcattagatacatcaaagacaccatcc 383 ||||| ||||||||||||||||| || | |||||||| ||||||||||| | ||||| Sbjct: 759 ggaacagcatagccaactttgatcccgttggactcatttgatacatcaaatatgccatct 700 Query: 384 tgaattttcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgca 443 || |||||||| ||||||| ||||| ||||| | || |||||||||||||||||||| Sbjct: 699 tggattttcttgtatattgtaccagcggtcttaatgaatgcctcctcgacgttttgtgca 640 Query: 444 gtttttgcagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcc 503 ||||| |||||||||||||| || | ||||||| ||||||||| ||||| || |||||| Sbjct: 639 gttttagcagatgcctccataaaaaccagaccatgctccttggcaaactgttcgccttcc 580 Query: 504 tcgaagctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtc 563 || |||| |||||||| |||||||| |||||||| |||||||||| ||||| | ||| Sbjct: 579 tcatagctgacagcacgcctatgagaaaggtcacatttgtttccaatcagcatcactgtc 520 Query: 564 atgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtt 623 |||||||||||||| |||||||| |||||||| ||||| ||||| |||||||| || || Sbjct: 519 atgttagcatttgcatgttgcctggcatcttctagccaacttgcgagatgattgaaggtc 460 Query: 624 tccctcctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatcta 683 |||||||| ||||| || ||||||||||| || ||||| ||||| ||||||||||| ||| Sbjct: 459 tccctcctagtgatatcataaaccaaaagggctccagcagctcctctgtagtatgaccta 400 Query: 684 gttatcgatctgaatgattcttggcc 709 || || |||||||||||||||||||| Sbjct: 399 gtaatagatctgaatgattcttggcc 374
>emb|X77795.1|ZMYPTM3 Z.mays yptm3 mRNA Length = 952 Score = 297 bits (150), Expect = 3e-77 Identities = 327/386 (84%) Strand = Plus / Minus Query: 324 ggaactgcatagccaactttgattccatacgactcattagatacatcaaagacaccatcc 383 ||||| ||||||||||||||||| || | |||||||| ||||||||||| | ||||| Sbjct: 636 ggaacagcatagccaactttgatcccgttggactcatttgatacatcaaatatgccatct 577 Query: 384 tgaattttcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgca 443 || |||||||| ||||||| ||||| ||||| | || |||||||||||||||||||| Sbjct: 576 tggattttcttgtatattgtaccagcggtcttaatgaatgcctcctcgacgttttgtgca 517 Query: 444 gtttttgcagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcc 503 ||||| |||||||||||||| || | ||||||| ||||||||| ||||| || |||||| Sbjct: 516 gttttagcagatgcctccataaaaaccagaccatgctccttggcaaactgttcgccttcc 457 Query: 504 tcgaagctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtc 563 || |||| |||||||| |||||||| |||||||| || ||||||| ||||| | ||| Sbjct: 456 tcatagctgacagcacgcctatgagaaaggtcacatttatttccaatcagcatcactgtc 397 Query: 564 atgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtt 623 |||||||||||||| |||||||| |||||||| ||||| ||||| |||||||| || || Sbjct: 396 atgttagcatttgcatgttgcctggcatcttctagccaacttgcgagatgattgaaggtc 337 Query: 624 tccctcctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatcta 683 |||||||| ||||| || ||||||||||| || ||||| ||||| ||||||||||| ||| Sbjct: 336 tccctcctagtgatatcataaaccaaaagggctccagcagctcctctgtagtatgaccta 277 Query: 684 gttatcgatctgaatgattcttggcc 709 || || |||||||||||||||||||| Sbjct: 276 gtaatagatctgaatgattcttggcc 251
>gb|BT013290.1| Lycopersicon esculentum clone 134905R, mRNA sequence Length = 751 Score = 180 bits (91), Expect = 4e-42 Identities = 307/379 (81%) Strand = Plus / Minus Query: 331 catagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaattt 390 |||| |||||||| |||||||||||||| || ||||||||||| || |||||||| |||| Sbjct: 494 catacccaacttttattccatacgactcgtttgatacatcaaacactccatcctgtattt 435 Query: 391 tcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagtttttg 450 ||||||| || | ||| || || | ||| |||| ||||| || || || ||||| | Sbjct: 434 tcttatagatcgtggaagctgtttttataaaagcctcttcgacattctgagctgttttag 375 Query: 451 cagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaagc 510 |||| || ||||| || || | ||||| |||||||| |||||||| |||||||| || Sbjct: 374 cagaggcttccataaatatcaacccattttccttggcaaactgctcgccttcctctgtgc 315 Query: 511 tcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgttag 570 | ||||| | ||| |||| || |||||||| ||||||| ||||| || ||||||| | Sbjct: 314 ttacagctcttctgtgagcaagatcacacttatttccaatcagcattatactcatgtttg 255 Query: 571 catttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctcc 630 |||||||||| |||||||||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 254 catttgcgtgctgccttgcatcttccagccaactagcaaggtgattaaatgtttccctcc 195 Query: 631 tggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatcg 690 |||| || |||||||| | || || || || || || ||||||||||| || || || | Sbjct: 194 tggtaatatcgtaaacaagtagtgccccggcagcacctctgtagtatgacctcgtgatag 135 Query: 691 atctgaatgattcttggcc 709 ||||||||||||||||||| Sbjct: 134 atctgaatgattcttggcc 116
>gb|AF397451.1| Nicotiana tabacum small GTPase Rab2 (Rab2) mRNA, complete cds Length = 642 Score = 172 bits (87), Expect = 1e-39 Identities = 306/379 (80%) Strand = Plus / Minus Query: 331 catagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaattt 390 |||| |||||||| ||||| || |||||||| ||||||||||| || |||||||| |||| Sbjct: 574 catacccaacttttattccgtatgactcatttgatacatcaaacactccatcctgtattt 515 Query: 391 tcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagtttttg 450 ||||||| || | | || || ||| ||| |||| || || || || |||||||| | Sbjct: 514 tcttatagatagttgaggctgttctgataaaagcctcttcaacattctgagcagttttgg 455 Query: 451 cagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaagc 510 |||| |||||||| || || | ||||| ||||| ||||||||||| ||||| || || Sbjct: 454 cagaggcctccataaatatcaagccattttcctttgcgaactgctcgccttcttctgtgc 395 Query: 511 tcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgttag 570 | ||||| | ||| |||| || |||||||||||||| | |||||| || |||||||| | Sbjct: 394 ttacagcccttctgtgagccagatcacacttgtttcctattagcattatagtcatgtttg 335 Query: 571 catttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctcc 630 ||||||| || |||||||| ||||||||||| || ||||| ||||| ||||||||||||| Sbjct: 334 catttgcatgctgccttgcgtcttccagccaactagcaaggtgattgaacgtttccctcc 275 Query: 631 tggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatcg 690 | || || || ||||| | || || ||||| || || ||||||||||| ||||| || | Sbjct: 274 ttgtaatatcataaacaagcagtgccccagcagcacctctgtagtatgacctagtgatag 215 Query: 691 atctgaatgattcttggcc 709 ||||||||||||||||||| Sbjct: 214 atctgaatgattcttggcc 196
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 168 bits (85), Expect = 2e-38 Identities = 163/189 (86%) Strand = Plus / Minus Query: 444 gtttttgcagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcc 503 ||||||||||| |||||||| || || ||||| | ||| || || |||||||| |||||| Sbjct: 23469531 gtttttgcagacgcctccataaatatcagaccgtgctcttttgcaaactgctcgccttcc 23469472 Query: 504 tcgaagctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtc 563 || ||||||||||||| ||||||||||| ||| | || |||||||| ||||| || ||| Sbjct: 23469471 tcatagctcacagcacgcctatgagatagatcagatttatttccaacaagcattattgtc 23469412 Query: 564 atgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtt 623 ||||||||||| || |||||||||||||||||||||||||| ||||||||||| || || Sbjct: 23469411 atgttagcattcgcatgttgccttgcatcttccagccagctcgcaagatgattgaatgtc 23469352 Query: 624 tccctcctg 632 ||||||||| Sbjct: 23469351 tccctcctg 23469343 Score = 107 bits (54), Expect = 5e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 356 ctcattagatacatcaaagacaccatcctgaattttcttatatattgctccagcagtctt 415 ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 23469700 ctcattagataaatcaaagacaccatcttgaattttcttgtatattgctccagcagtctt 23469641 Query: 416 gacaaa 421 |||||| Sbjct: 23469640 gacaaa 23469635 Score = 87.7 bits (44), Expect = 5e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 636 atgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatcgatctg 695 ||||| ||||||||||||||||| || || || |||||||| |||||||||||||||||| Sbjct: 23469195 atgtcataaaccaaaagagcaccggcagcccctctgtagtacgatctagttatcgatctg 23469136 Query: 696 aatgattcttggcctg 711 ||||| || ||||||| Sbjct: 23469135 aatgactcctggcctg 23469120
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 168 bits (85), Expect = 2e-38 Identities = 163/189 (86%) Strand = Plus / Minus Query: 444 gtttttgcagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcc 503 ||||||||||| |||||||| || || ||||| | ||| || || |||||||| |||||| Sbjct: 25434 gtttttgcagacgcctccataaatatcagaccgtgctcttttgcaaactgctcgccttcc 25375 Query: 504 tcgaagctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtc 563 || ||||||||||||| ||||||||||| ||| | || |||||||| ||||| || ||| Sbjct: 25374 tcatagctcacagcacgcctatgagatagatcagatttatttccaacaagcattattgtc 25315 Query: 564 atgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtt 623 ||||||||||| || |||||||||||||||||||||||||| ||||||||||| || || Sbjct: 25314 atgttagcattcgcatgttgccttgcatcttccagccagctcgcaagatgattgaatgtc 25255 Query: 624 tccctcctg 632 ||||||||| Sbjct: 25254 tccctcctg 25246 Score = 107 bits (54), Expect = 5e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 356 ctcattagatacatcaaagacaccatcctgaattttcttatatattgctccagcagtctt 415 ||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 25603 ctcattagataaatcaaagacaccatcttgaattttcttgtatattgctccagcagtctt 25544 Query: 416 gacaaa 421 |||||| Sbjct: 25543 gacaaa 25538 Score = 87.7 bits (44), Expect = 5e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 636 atgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatcgatctg 695 ||||| ||||||||||||||||| || || || |||||||| |||||||||||||||||| Sbjct: 25098 atgtcataaaccaaaagagcaccggcagcccctctgtagtacgatctagttatcgatctg 25039 Query: 696 aatgattcttggcctg 711 ||||| || ||||||| Sbjct: 25038 aatgactcctggcctg 25023
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 161 bits (81), Expect = 4e-36 Identities = 177/209 (84%) Strand = Plus / Minus Query: 424 cctcctcgacgttttgtgcagtttttgcagatgcctccatgaagatgagaccattctcct 483 ||||||| || ||||||||||||||||||||||||||||| || | || |||| ||||| Sbjct: 22620439 cctcctcaacattttgtgcagtttttgcagatgcctccataaatactaggccatgctcct 22620380 Query: 484 tggcgaactgctcaccttcctcgaagctcacagcacgtctatgagataggtcacacttgt 543 |||| || || ||||||||||| |||| ||||||||||||||||| || ||||| |||| Sbjct: 22620379 tggcaaattgttcaccttcctcatagctgacagcacgtctatgagacagatcacatttgt 22620320 Query: 544 ttccaactagcatgatcgtcatgttagcatttgcgtgttgccttgcatcttccagccagc 603 | |||| ||||| | |||||||| |||||||| || || ||||||||||| ||||||| Sbjct: 22620319 taccaataagcattactgtcatgttggcatttgcatgctgtcttgcatcttctagccagc 22620260 Query: 604 ttgcaagatgattaaacgtttccctcctg 632 | |||||||||||||| || || |||||| Sbjct: 22620259 tagcaagatgattaaaagtctctctcctg 22620231 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 629 cctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttat 688 ||||||||| || || |||||||| |||||||| || ||||||||||||||||||||||| Sbjct: 22620150 cctggtgatatcatacaccaaaagggcaccagcagcacccctgtagtatgatctagttat 22620091 Query: 689 cgatctgaatgattcttg 706 |||||||| |||||||| Sbjct: 22620090 agatctgaacgattcttg 22620073 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 356 ctcattagatacatcaaagacaccatcctgaattttcttatatattgctccagcagtctt 415 ||||||||||||||||||||||||||| || |||||||| || |||| |||||||||||| Sbjct: 22620592 ctcattagatacatcaaagacaccatcttggattttcttgtaaattgttccagcagtctt 22620533 Query: 416 ga 417 || Sbjct: 22620532 ga 22620531 Score = 77.8 bits (39), Expect = 5e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 475 cattctccttggcgaactgctcaccttcctcgaagctcacagcacgtctatgagataggt 534 |||||| |||||| ||||| |||||||||||| |||| ||||||||||||| ||| |||| Sbjct: 12906891 cattctgcttggcaaactgttcaccttcctcgtagctgacagcacgtctatcagagaggt 12906832 Query: 535 cacacttgtttccaa 549 | || |||||||||| Sbjct: 12906831 cgcatttgtttccaa 12906817 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 330 gcatagccaactttgattccatacgact 357 ||||||||||||||||| ||||| |||| Sbjct: 22621124 gcatagccaactttgatcccataagact 22621097
>dbj|AP005644.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0056I22 Length = 147728 Score = 161 bits (81), Expect = 4e-36 Identities = 177/209 (84%) Strand = Plus / Minus Query: 424 cctcctcgacgttttgtgcagtttttgcagatgcctccatgaagatgagaccattctcct 483 ||||||| || ||||||||||||||||||||||||||||| || | || |||| ||||| Sbjct: 68250 cctcctcaacattttgtgcagtttttgcagatgcctccataaatactaggccatgctcct 68191 Query: 484 tggcgaactgctcaccttcctcgaagctcacagcacgtctatgagataggtcacacttgt 543 |||| || || ||||||||||| |||| ||||||||||||||||| || ||||| |||| Sbjct: 68190 tggcaaattgttcaccttcctcatagctgacagcacgtctatgagacagatcacatttgt 68131 Query: 544 ttccaactagcatgatcgtcatgttagcatttgcgtgttgccttgcatcttccagccagc 603 | |||| ||||| | |||||||| |||||||| || || ||||||||||| ||||||| Sbjct: 68130 taccaataagcattactgtcatgttggcatttgcatgctgtcttgcatcttctagccagc 68071 Query: 604 ttgcaagatgattaaacgtttccctcctg 632 | |||||||||||||| || || |||||| Sbjct: 68070 tagcaagatgattaaaagtctctctcctg 68042 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 629 cctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttat 688 ||||||||| || || |||||||| |||||||| || ||||||||||||||||||||||| Sbjct: 67961 cctggtgatatcatacaccaaaagggcaccagcagcacccctgtagtatgatctagttat 67902 Query: 689 cgatctgaatgattcttg 706 |||||||| |||||||| Sbjct: 67901 agatctgaacgattcttg 67884 Score = 83.8 bits (42), Expect = 7e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 356 ctcattagatacatcaaagacaccatcctgaattttcttatatattgctccagcagtctt 415 ||||||||||||||||||||||||||| || |||||||| || |||| |||||||||||| Sbjct: 68403 ctcattagatacatcaaagacaccatcttggattttcttgtaaattgttccagcagtctt 68344 Query: 416 ga 417 || Sbjct: 68343 ga 68342 Score = 40.1 bits (20), Expect = 9.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 330 gcatagccaactttgattccatacgact 357 ||||||||||||||||| ||||| |||| Sbjct: 68935 gcatagccaactttgatcccataagact 68908
>gb|BT012942.1| Lycopersicon esculentum clone 114110R, mRNA sequence Length = 1105 Score = 159 bits (80), Expect = 2e-35 Identities = 302/376 (80%) Strand = Plus / Minus Query: 331 catagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaattt 390 |||| |||||||| |||||||| |||||||| ||||||||||| || |||||||| |||| Sbjct: 891 catatccaacttttattccataggactcatttgatacatcaaacactccatcctgtattt 832 Query: 391 tcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagtttttg 450 ||||||| |||| | || || ||| ||| |||| || || || || || ||||| | Sbjct: 831 tcttataaattgttgaggctgttctgataaaagcctcttcaacattctgagctgttttgg 772 Query: 451 cagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaagc 510 |||| |||||||| || || | ||||| |||||||| || || || ||||||||| || Sbjct: 771 cagaggcctccataaatatcaacccattttccttggcaaattgttcgccttcctcggtgc 712 Query: 511 tcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgttag 570 | ||||| | ||| |||| || |||||||||||||||| ||||| || |||||||| | Sbjct: 711 ttacagcccttctgtgagccagatcacacttgtttccaatcagcattatggtcatgtttg 652 Query: 571 catttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctcc 630 ||||||| || |||||||||||||| ||||| || || || |||||||| |||||||||| Sbjct: 651 catttgcatgctgccttgcatcttctagccaactagctaggtgattaaatgtttccctcc 592 Query: 631 tggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatcg 690 | || || || ||||| | || || ||||| || || ||||||||||| || || || | Sbjct: 591 ttgtaatatcataaacaagtagtgccccagcagcacctctgtagtatgacctcgtgatag 532 Query: 691 atctgaatgattcttg 706 |||||||||||||||| Sbjct: 531 atctgaatgattcttg 516
>ref|NM_117821.2| Arabidopsis thaliana AT-RAB2; GTP binding AT4G17170 (AT-RAB2) mRNA, complete cds Length = 962 Score = 157 bits (79), Expect = 6e-35 Identities = 250/307 (81%) Strand = Plus / Minus Query: 331 catagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaattt 390 |||| ||||||||||||||||| |||||||| || |||||||| |||||||| ||||| | Sbjct: 700 catatccaactttgattccatatgactcatttgacacatcaaacacaccatcttgaatct 641 Query: 391 tcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagtttttg 450 |||| ||||||| | |||| ||||| | || ||||||| || || || ||||| || | Sbjct: 640 tcttgtatattgttgcagctgtcttaatgaatgcctcctcaacattctgagcagtcttgg 581 Query: 451 cagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaagc 510 |||| ||||||||||| || ||||| | |||||| || |||||||| |||||||| | Sbjct: 580 cagaggcctccatgaatataagaccgtgctcctttgcaaactgctctccttcctctgtac 521 Query: 511 tcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgttag 570 |||| || | ||| |||| || |||||||| || |||| ||||| |||||||| || | Sbjct: 520 tcactgcccttctgtgagcaagatcacacttattcccaatgagcattatcgtcatatttg 461 Query: 571 catttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctcc 630 ||||||| || |||||||||||||| |||||||| || ||||| ||||| || ||||||| Sbjct: 460 catttgcatgctgccttgcatcttctagccagctagctagatggttaaatgtctccctcc 401 Query: 631 tggtgat 637 | ||||| Sbjct: 400 ttgtgat 394
>ref|NM_195491.1| Oryza sativa (japonica cultivar-group) putative small GTP binding protein Rab2 (OSJNBa0014J14.25), mRNA Length = 591 Score = 157 bits (79), Expect = 6e-35 Identities = 222/269 (82%), Gaps = 3/269 (1%) Strand = Plus / Minus Query: 444 gtttttgcagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcc 503 |||||||| ||||||||||| |||| |||||||| ||||||||||||||| |||||||| Sbjct: 464 gtttttgctgatgcctccataaagaggagaccatgctccttggcgaactgttcaccttct 405 Query: 504 tcgaagctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtc 563 | |||| ||| ||||||||||||||| ||| || |||||||| | || || || ||| Sbjct: 404 tgatagcttacaacacgtctatgagataagtcgcatttgtttccgatcagaattattgtc 345 Query: 564 atgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgatt---aaac 620 ||| ||| | || || ||| |||||||||| | |||||||||||||||||| ||| Sbjct: 344 atgcgggcactcgcatgctgcgttgcatcttctaaccagcttgcaagatgattaaaaaaa 285 Query: 621 gtttccctcctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgat 680 || |||||||||||||| |||||||||||||| | |||| ||| |||||||||||| Sbjct: 284 gtctccctcctggtgatatcgtaaaccaaaaggcaagcagcatttcctctgtagtatgat 225 Query: 681 ctagttatcgatctgaatgattcttggcc 709 |||||||| ||||||||| ||||||||| Sbjct: 224 ctagttatgcatctgaatgcttcttggcc 196
>emb|Y09314.1|ATRAB2LPR A.thaliana mRNA for Rab2-like protein Length = 964 Score = 157 bits (79), Expect = 6e-35 Identities = 250/307 (81%) Strand = Plus / Minus Query: 331 catagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaattt 390 |||| ||||||||||||||||| |||||||| || |||||||| |||||||| ||||| | Sbjct: 682 catatccaactttgattccatatgactcatttgacacatcaaacacaccatcttgaatct 623 Query: 391 tcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagtttttg 450 |||| ||||||| | |||| ||||| | || ||||||| || || || ||||| || | Sbjct: 622 tcttgtatattgttgcagctgtcttaatgaatgcctcctcaacattctgagcagtcttgg 563 Query: 451 cagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaagc 510 |||| ||||||||||| || ||||| | |||||| || |||||||| |||||||| | Sbjct: 562 cagaggcctccatgaatataagaccgtgctcctttgcaaactgctctccttcctctgtac 503 Query: 511 tcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgttag 570 |||| || | ||| |||| || |||||||| || |||| ||||| |||||||| || | Sbjct: 502 tcactgcccttctgtgagcaagatcacacttattcccaatgagcattatcgtcatatttg 443 Query: 571 catttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctcc 630 ||||||| || |||||||||||||| |||||||| || ||||| ||||| || ||||||| Sbjct: 442 catttgcatgctgccttgcatcttctagccagctagctagatggttaaatgtctccctcc 383 Query: 631 tggtgat 637 | ||||| Sbjct: 382 ttgtgat 376
>gb|BT006251.1| Arabidopsis thaliana At4g17170 mRNA, complete cds Length = 636 Score = 157 bits (79), Expect = 6e-35 Identities = 250/307 (81%) Strand = Plus / Minus Query: 331 catagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaattt 390 |||| ||||||||||||||||| |||||||| || |||||||| |||||||| ||||| | Sbjct: 568 catatccaactttgattccatatgactcatttgacacatcaaacacaccatcttgaatct 509 Query: 391 tcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagtttttg 450 |||| ||||||| | |||| ||||| | || ||||||| || || || ||||| || | Sbjct: 508 tcttgtatattgttgcagctgtcttaatgaatgcctcctcaacattctgagcagtcttgg 449 Query: 451 cagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaagc 510 |||| ||||||||||| || ||||| | |||||| || |||||||| |||||||| | Sbjct: 448 cagaggcctccatgaatataagaccgtgctcctttgcaaactgctctccttcctctgtac 389 Query: 511 tcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgttag 570 |||| || | ||| |||| || |||||||| || |||| ||||| |||||||| || | Sbjct: 388 tcactgcccttctgtgagcaagatcacacttattcccaatgagcattatcgtcatatttg 329 Query: 571 catttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctcc 630 ||||||| || |||||||||||||| |||||||| || ||||| ||||| || ||||||| Sbjct: 328 catttgcatgctgccttgcatcttctagccagctagctagatggttaaatgtctccctcc 269 Query: 631 tggtgat 637 | ||||| Sbjct: 268 ttgtgat 262
>gb|BT002513.1| Arabidopsis thaliana GTP-binding RAB2A like protein (At4g17170) mRNA, complete cds Length = 931 Score = 157 bits (79), Expect = 6e-35 Identities = 250/307 (81%) Strand = Plus / Minus Query: 331 catagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaattt 390 |||| ||||||||||||||||| |||||||| || |||||||| |||||||| ||||| | Sbjct: 671 catatccaactttgattccatatgactcatttgacacatcaaacacaccatcttgaatct 612 Query: 391 tcttatatattgctccagcagtcttgacaaagccctcctcgacgttttgtgcagtttttg 450 |||| ||||||| | |||| ||||| | || ||||||| || || || ||||| || | Sbjct: 611 tcttgtatattgttgcagctgtcttaatgaatgcctcctcaacattctgagcagtcttgg 552 Query: 451 cagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaagc 510 |||| ||||||||||| || ||||| | |||||| || |||||||| |||||||| | Sbjct: 551 cagaggcctccatgaatataagaccgtgctcctttgcaaactgctctccttcctctgtac 492 Query: 511 tcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgttag 570 |||| || | ||| |||| || |||||||| || |||| ||||| |||||||| || | Sbjct: 491 tcactgcccttctgtgagcaagatcacacttattcccaatgagcattatcgtcatatttg 432 Query: 571 catttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctcc 630 ||||||| || |||||||||||||| |||||||| || ||||| ||||| || ||||||| Sbjct: 431 catttgcatgctgccttgcatcttctagccagctagctagatggttaaatgtctccctcc 372 Query: 631 tggtgat 637 | ||||| Sbjct: 371 ttgtgat 365
>emb|Z73937.1|LJRAB2A L.japonicus mRNA for small GTP-binding protein, RAB2A Length = 1125 Score = 111 bits (56), Expect = 3e-21 Identities = 236/296 (79%) Strand = Plus / Minus Query: 339 actttgattccatacgactcattagatacatcaaagacaccatcctgaattttcttatat 398 ||||| |||||||| |||||||| ||||||||||| || ||||||||||| || || ||| Sbjct: 752 actttaattccataagactcatttgatacatcaaaaactccatcctgaatctttttgtat 693 Query: 399 attgctccagcagtcttgacaaagccctcctcgacgttttgtgcagtttttgcagatgcc 458 || | | |||| || || | || |||| || || || || |||||||| || || ||| Sbjct: 692 atggttgcagctgtttttatgaatgcctcttcaacattctgagcagttttagctgaagcc 633 Query: 459 tccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaagctcacagca 518 ||||||||||| | |||| ||||| || ||||||||||||||||| ||| ||||| Sbjct: 632 tccatgaagatcaatccatgttcctttgcaaactgctcaccttcctctgtgcttacagcc 573 Query: 519 cgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgttagcatttgcg 578 ||||| |||| || || |||||||| |||| ||||| || ||||| || ||||| ||| Sbjct: 572 cgtctgtgagcaagatcgcacttgttgccaatcagcataattgtcatatttgcattagcg 513 Query: 579 tgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctcctggt 634 || |||||||||||||||| ||| || || | |||||||| || ||||||||||| Sbjct: 512 tgctgccttgcatcttccaaccaactagccaagtgattaaatgtctccctcctggt 457
>gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0014J14, complete sequence Length = 191397 Score = 111 bits (56), Expect = 3e-21 Identities = 146/176 (82%) Strand = Plus / Plus Query: 444 gtttttgcagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcc 503 |||||||| ||||||||||| |||| |||||||| ||||||||||||||| |||||||| Sbjct: 122904 gtttttgctgatgcctccataaagaggagaccatgctccttggcgaactgttcaccttct 122963 Query: 504 tcgaagctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtc 563 | |||| ||| ||||||||||||||| ||| || |||||||| | || || || ||| Sbjct: 122964 tgatagcttacaacacgtctatgagataagtcgcatttgtttccgatcagaattattgtc 123023 Query: 564 atgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaa 619 ||| ||| | || || ||| |||||||||| | ||||||||||||||||||||| Sbjct: 123024 atgcgggcactcgcatgctgcgttgcatcttctaaccagcttgcaagatgattaaa 123079 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 629 cctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttat 688 ||||||||| |||||||||||||| | |||| ||| |||||||||||||||||||| Sbjct: 123189 cctggtgatatcgtaaaccaaaaggcaagcagcatttcctctgtagtatgatctagttat 123248 Query: 689 cgatctgaatgattcttggcc 709 ||||||||| ||||||||| Sbjct: 123249 gcatctgaatgcttcttggcc 123269
>gb|U32185.1|GMU32185 Glycine max guanine nucleotide regulatory protein (rab2) mRNA, complete cds Length = 949 Score = 111 bits (56), Expect = 3e-21 Identities = 236/296 (79%) Strand = Plus / Minus Query: 339 actttgattccatacgactcattagatacatcaaagacaccatcctgaattttcttatat 398 ||||| |||||||| |||||||| ||||||||||| || ||||| ||||| || || ||| Sbjct: 655 acttttattccataagactcatttgatacatcaaaaactccatcttgaatctttttgtat 596 Query: 399 attgctccagcagtcttgacaaagccctcctcgacgttttgtgcagtttttgcagatgcc 458 || | | |||| || || | || |||| || || || || ||||||||||| || ||| Sbjct: 595 atggttgcagctgtttttatgaatgcctcttcaacattctgagcagtttttgctgaggcc 536 Query: 459 tccatgaagatgagaccattctccttggcgaactgctcaccttcctcgaagctcacagca 518 ||||||||||| | |||| |||||| || || ||||| |||||||| ||| ||||| Sbjct: 535 tccatgaagatcaatccatgctcctttgcaaattgctcgccttcctctgtgcttacagcc 476 Query: 519 cgtctatgagataggtcacacttgtttccaactagcatgatcgtcatgttagcatttgcg 578 | |||||||| || ||||||||||| |||| ||||| || ||||| || |||||||| Sbjct: 475 cttctatgagcaagatcacacttgttgccaatcagcataatagtcatatttgcatttgca 416 Query: 579 tgttgccttgcatcttccagccagcttgcaagatgattaaacgtttccctcctggt 634 || || ||||||| ||||| |||||| || | ||||||||| || ||||||||||| Sbjct: 415 tgctgtcttgcatgttccaaccagctagccaaatgattaaatgtctccctcctggt 360
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 111 bits (56), Expect = 3e-21 Identities = 146/176 (82%) Strand = Plus / Plus Query: 444 gtttttgcagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcc 503 |||||||| ||||||||||| |||| |||||||| ||||||||||||||| |||||||| Sbjct: 7297543 gtttttgctgatgcctccataaagaggagaccatgctccttggcgaactgttcaccttct 7297602 Query: 504 tcgaagctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtc 563 | |||| ||| ||||||||||||||| ||| || |||||||| | || || || ||| Sbjct: 7297603 tgatagcttacaacacgtctatgagataagtcgcatttgtttccgatcagaattattgtc 7297662 Query: 564 atgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaa 619 ||| ||| | || || ||| |||||||||| | ||||||||||||||||||||| Sbjct: 7297663 atgcgggcactcgcatgctgcgttgcatcttctaaccagcttgcaagatgattaaa 7297718 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 629 cctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttat 688 ||||||||| |||||||||||||| | |||| ||| |||||||||||||||||||| Sbjct: 7297828 cctggtgatatcgtaaaccaaaaggcaagcagcatttcctctgtagtatgatctagttat 7297887 Query: 689 cgatctgaatgattcttggcc 709 ||||||||| ||||||||| Sbjct: 7297888 gcatctgaatgcttcttggcc 7297908
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 111 bits (56), Expect = 3e-21 Identities = 146/176 (82%) Strand = Plus / Plus Query: 444 gtttttgcagatgcctccatgaagatgagaccattctccttggcgaactgctcaccttcc 503 |||||||| ||||||||||| |||| |||||||| ||||||||||||||| |||||||| Sbjct: 7300842 gtttttgctgatgcctccataaagaggagaccatgctccttggcgaactgttcaccttct 7300901 Query: 504 tcgaagctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatcgtc 563 | |||| ||| ||||||||||||||| ||| || |||||||| | || || || ||| Sbjct: 7300902 tgatagcttacaacacgtctatgagataagtcgcatttgtttccgatcagaattattgtc 7300961 Query: 564 atgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaa 619 ||| ||| | || || ||| |||||||||| | ||||||||||||||||||||| Sbjct: 7300962 atgcgggcactcgcatgctgcgttgcatcttctaaccagcttgcaagatgattaaa 7301017 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Plus Query: 629 cctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttat 688 ||||||||| |||||||||||||| | |||| ||| |||||||||||||||||||| Sbjct: 7301127 cctggtgatatcgtaaaccaaaaggcaagcagcatttcctctgtagtatgatctagttat 7301186 Query: 689 cgatctgaatgattcttggcc 709 ||||||||| ||||||||| Sbjct: 7301187 gcatctgaatgcttcttggcc 7301207
>ref|NM_119752.3| Arabidopsis thaliana ATGB2 (GTP-BINDING 2); GTP binding AT4G35860 (ATGB2) mRNA, complete cds Length = 1113 Score = 105 bits (53), Expect = 2e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 562 tcatgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacg 621 ||||||||| |||||| ||||||| ||||| |||| ||||||||| ||||| ||||||| Sbjct: 536 tcatgttaggatttgcatgttgccgagcatcctccaaccagcttgccagatggttaaacg 477 Query: 622 tttccctcctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatc 681 | || |||||||||||||| ||||||| | ||| || || ||||| ||||||||||||| Sbjct: 476 tctctctcctggtgatgtcataaaccagtaaagctccggctgctcctctgtagtatgatc 417 Query: 682 tagttatcgatctgaatgattcttg 706 | || || ||||| || |||||||| Sbjct: 416 tggtgatggatctaaaagattcttg 392 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 354 gactcattagatacatcaaagacaccatcctgaattttct 393 ||||| || |||||||||||||||||||||||||| |||| Sbjct: 744 gactcgttggatacatcaaagacaccatcctgaatgttct 705
>gb|AY117348.1| Arabidopsis thaliana putative GTP-binding protein GB2 (At4g35860) mRNA, complete cds Length = 667 Score = 105 bits (53), Expect = 2e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 562 tcatgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacg 621 ||||||||| |||||| ||||||| ||||| |||| ||||||||| ||||| ||||||| Sbjct: 337 tcatgttaggatttgcatgttgccgagcatcctccaaccagcttgccagatggttaaacg 278 Query: 622 tttccctcctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatc 681 | || |||||||||||||| ||||||| | ||| || || ||||| ||||||||||||| Sbjct: 277 tctctctcctggtgatgtcataaaccagtaaagctccggctgctcctctgtagtatgatc 218 Query: 682 tagttatcgatctgaatgattcttg 706 | || || ||||| || |||||||| Sbjct: 217 tggtgatggatctaaaagattcttg 193 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 354 gactcattagatacatcaaagacaccatcctgaattttct 393 ||||| || |||||||||||||||||||||||||| |||| Sbjct: 545 gactcgttggatacatcaaagacaccatcctgaatgttct 506
>gb|AY065262.1| Arabidopsis thaliana putative GTP-binding protein GB2 (At4g35860) mRNA, complete cds Length = 1012 Score = 105 bits (53), Expect = 2e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 562 tcatgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacg 621 ||||||||| |||||| ||||||| ||||| |||| ||||||||| ||||| ||||||| Sbjct: 474 tcatgttaggatttgcatgttgccgagcatcctccaaccagcttgccagatggttaaacg 415 Query: 622 tttccctcctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatc 681 | || |||||||||||||| ||||||| | ||| || || ||||| ||||||||||||| Sbjct: 414 tctctctcctggtgatgtcataaaccagtaaagctccggctgctcctctgtagtatgatc 355 Query: 682 tagttatcgatctgaatgattcttg 706 | || || ||||| || |||||||| Sbjct: 354 tggtgatggatctaaaagattcttg 330 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 354 gactcattagatacatcaaagacaccatcctgaattttct 393 ||||| || |||||||||||||||||||||||||| |||| Sbjct: 682 gactcgttggatacatcaaagacaccatcctgaatgttct 643
>gb|U46925.1|ATU46925 Arabidopsis thaliana GTP-binding protein ATGB2 mRNA, complete cds Length = 987 Score = 105 bits (53), Expect = 2e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 562 tcatgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacg 621 ||||||||| |||||| ||||||| ||||| |||| ||||||||| ||||| ||||||| Sbjct: 464 tcatgttaggatttgcatgttgccgagcatcctccaaccagcttgccagatggttaaacg 405 Query: 622 tttccctcctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatc 681 | || |||||||||||||| ||||||| | ||| || || ||||| ||||||||||||| Sbjct: 404 tctctctcctggtgatgtcataaaccagtaaagctccggctgctcctctgtagtatgatc 345 Query: 682 tagttatcgatctgaatgattcttg 706 | || || ||||| || |||||||| Sbjct: 344 tggtgatggatctaaaagattcttg 320 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 354 gactcattagatacatcaaagacaccatcctgaattttct 393 ||||| || |||||||||||||||||||||||||| |||| Sbjct: 672 gactcgttggatacatcaaagacaccatcctgaatgttct 633
>emb|BX828623.1|CNS0A3H1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL22ZG04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1042 Score = 105 bits (53), Expect = 2e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 562 tcatgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacg 621 ||||||||| |||||| ||||||| ||||| |||| ||||||||| ||||| ||||||| Sbjct: 536 tcatgttaggatttgcatgttgccgagcatcctccaaccagcttgccagatggttaaacg 477 Query: 622 tttccctcctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatc 681 | || |||||||||||||| ||||||| | ||| || || ||||| ||||||||||||| Sbjct: 476 tctctctcctggtgatgtcataaaccagtaaagctccggctgctcctctgtagtatgatc 417 Query: 682 tagttatcgatctgaatgattcttg 706 | || || ||||| || |||||||| Sbjct: 416 tggtgatggatctaaaagattcttg 392 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 354 gactcattagatacatcaaagacaccatcctgaattttct 393 ||||| || |||||||||||||||||||||||||| |||| Sbjct: 744 gactcgttggatacatcaaagacaccatcctgaatgttct 705
>gb|AY085750.1| Arabidopsis thaliana clone 17725 mRNA, complete sequence Length = 970 Score = 105 bits (53), Expect = 2e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 562 tcatgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacg 621 ||||||||| |||||| ||||||| ||||| |||| ||||||||| ||||| ||||||| Sbjct: 474 tcatgttaggatttgcatgttgccgagcatcctccaaccagcttgccagatggttaaacg 415 Query: 622 tttccctcctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatc 681 | || |||||||||||||| ||||||| | ||| || || ||||| ||||||||||||| Sbjct: 414 tctctctcctggtgatgtcataaaccagtaaagctccggctgctcctctgtagtatgatc 355 Query: 682 tagttatcgatctgaatgattcttg 706 | || || ||||| || |||||||| Sbjct: 354 tggtgatggatctaaaagattcttg 330 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 354 gactcattagatacatcaaagacaccatcctgaattttct 393 ||||| || |||||||||||||||||||||||||| |||| Sbjct: 682 gactcgttggatacatcaaagacaccatcctgaatgttct 643
>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8 Length = 207674 Score = 97.6 bits (49), Expect = 5e-17 Identities = 169/209 (80%) Strand = Plus / Plus Query: 424 cctcctcgacgttttgtgcagtttttgcagatgcctccatgaagatgagaccattctcct 483 ||||||| || || || ||||| || ||||| ||||||||||| || ||||| | ||||| Sbjct: 9927 cctcctcaacattctgagcagtcttggcagaggcctccatgaatataagaccgtgctcct 9986 Query: 484 tggcgaactgctcaccttcctcgaagctcacagcacgtctatgagataggtcacacttgt 543 | || |||||||| |||||||| ||||| || | ||| |||| || |||||||| | Sbjct: 9987 ttgcaaactgctctccttcctctgtactcactgcccttctgtgagcaagatcacacttat 10046 Query: 544 ttccaactagcatgatcgtcatgttagcatttgcgtgttgccttgcatcttccagccagc 603 | |||| ||||| |||||||| || |||||||| || |||||||||||||| ||||||| Sbjct: 10047 tcccaatgagcattatcgtcatatttgcatttgcatgctgccttgcatcttctagccagc 10106 Query: 604 ttgcaagatgattaaacgtttccctcctg 632 | || ||||| ||||| || ||||||||| Sbjct: 10107 tagctagatggttaaatgtctccctcctg 10135 Score = 81.8 bits (41), Expect = 3e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 331 catagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaattt 390 |||| ||||||||||||||||| |||||||| || |||||||| |||||||| ||||| | Sbjct: 9746 catatccaactttgattccatatgactcatttgacacatcaaacacaccatcttgaatct 9805 Query: 391 tcttatatattgctccagcagtctt 415 |||| ||||||| | |||| ||||| Sbjct: 9806 tcttgtatattgttgcagctgtctt 9830 Score = 52.0 bits (26), Expect = 0.003 Identities = 68/82 (82%) Strand = Plus / Plus Query: 424 cctcctcgacgttttgtgcagtttttgcagatgcctccatgaagatgagaccattctcct 483 |||||||||| || || ||||| || ||||| ||||||||||| || ||||||| |||| Sbjct: 7082 cctcctcgacattgtgagcagtcttagcagaggcctccatgaatataagaccatgctccc 7141 Query: 484 tggcgaactgctcaccttcctc 505 | || ||||| || |||||||| Sbjct: 7142 tagcaaactgttctccttcctc 7163
>emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 45 Length = 199548 Score = 97.6 bits (49), Expect = 5e-17 Identities = 169/209 (80%) Strand = Plus / Plus Query: 424 cctcctcgacgttttgtgcagtttttgcagatgcctccatgaagatgagaccattctcct 483 ||||||| || || || ||||| || ||||| ||||||||||| || ||||| | ||||| Sbjct: 193840 cctcctcaacattctgagcagtcttggcagaggcctccatgaatataagaccgtgctcct 193899 Query: 484 tggcgaactgctcaccttcctcgaagctcacagcacgtctatgagataggtcacacttgt 543 | || |||||||| |||||||| ||||| || | ||| |||| || |||||||| | Sbjct: 193900 ttgcaaactgctctccttcctctgtactcactgcccttctgtgagcaagatcacacttat 193959 Query: 544 ttccaactagcatgatcgtcatgttagcatttgcgtgttgccttgcatcttccagccagc 603 | |||| ||||| |||||||| || |||||||| || |||||||||||||| ||||||| Sbjct: 193960 tcccaatgagcattatcgtcatatttgcatttgcatgctgccttgcatcttctagccagc 194019 Query: 604 ttgcaagatgattaaacgtttccctcctg 632 | || ||||| ||||| || ||||||||| Sbjct: 194020 tagctagatggttaaatgtctccctcctg 194048 Score = 81.8 bits (41), Expect = 3e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 331 catagccaactttgattccatacgactcattagatacatcaaagacaccatcctgaattt 390 |||| ||||||||||||||||| |||||||| || |||||||| |||||||| ||||| | Sbjct: 193659 catatccaactttgattccatatgactcatttgacacatcaaacacaccatcttgaatct 193718 Query: 391 tcttatatattgctccagcagtctt 415 |||| ||||||| | |||| ||||| Sbjct: 193719 tcttgtatattgttgcagctgtctt 193743 Score = 52.0 bits (26), Expect = 0.003 Identities = 68/82 (82%) Strand = Plus / Plus Query: 424 cctcctcgacgttttgtgcagtttttgcagatgcctccatgaagatgagaccattctcct 483 |||||||||| || || ||||| || ||||| ||||||||||| || ||||||| |||| Sbjct: 190995 cctcctcgacattgtgagcagtcttagcagaggcctccatgaatataagaccatgctccc 191054 Query: 484 tggcgaactgctcaccttcctc 505 | || ||||| || |||||||| Sbjct: 191055 tagcaaactgttctccttcctc 191076
>emb|BX827723.1|CNS0A3RJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH14ZF11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 989 Score = 97.6 bits (49), Expect = 5e-17 Identities = 121/145 (83%) Strand = Plus / Minus Query: 562 tcatgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacg 621 ||||||||| |||||| ||||||| ||||| |||| ||||||||| ||||| ||||||| Sbjct: 510 tcatgttaggatttgcatgttgccgagcatcctccaaccagcttgccagatggttaaacg 451 Query: 622 tttccctcctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatc 681 || |||||||||||||| ||||||| | ||| || || ||||| ||||||||||||| Sbjct: 450 actctctcctggtgatgtcataaaccagtaaagctccggctgctcctctgtagtatgatc 391 Query: 682 tagttatcgatctgaatgattcttg 706 | || || ||||| || |||||||| Sbjct: 390 tggtgatggatctaaaagattcttg 366 Score = 48.1 bits (24), Expect = 0.040 Identities = 36/40 (90%) Strand = Plus / Minus Query: 354 gactcattagatacatcaaagacaccatcctgaattttct 393 ||||| || |||| ||||||||||||||||||||| |||| Sbjct: 718 gactcgttggataaatcaaagacaccatcctgaatgttct 679
>emb|BX828608.1|CNS0A3J5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL20ZH06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 925 Score = 97.6 bits (49), Expect = 5e-17 Identities = 121/145 (83%) Strand = Plus / Minus Query: 562 tcatgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaacg 621 ||||| ||| |||||| ||||||| ||||| |||| ||||||||| ||||| ||||||| Sbjct: 401 tcatgctaggatttgcatgttgccgagcatcctccaaccagcttgccagatggttaaacg 342 Query: 622 tttccctcctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatc 681 | || |||||||||||||| ||||||| | ||| || || ||||| ||||||||||||| Sbjct: 341 tctctctcctggtgatgtcataaaccagtaaagctccggctgctcctctgtagtatgatc 282 Query: 682 tagttatcgatctgaatgattcttg 706 | || || ||||| || |||||||| Sbjct: 281 tggtgatggatctaaaagattcttg 257 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 354 gactcattagatacatcaaagacaccatcctgaattttct 393 ||||| || |||||||||||||||||||||||||| |||| Sbjct: 609 gactcgttggatacatcaaagacaccatcctgaatgttct 570
>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence Length = 172016 Score = 93.7 bits (47), Expect = 8e-16 Identities = 155/191 (81%) Strand = Plus / Plus Query: 441 gcagtttttgcagatgcctccatgaagatgagaccattctccttggcgaactgctcacct 500 ||||||||||| || |||||||| ||||| | || |||||||| || ||||| |||||| Sbjct: 88352 gcagtttttgctgaggcctccataaagatcaacccgttctcctttgcaaactgttcacct 88411 Query: 501 tcctcgaagctcacagcacgtctatgagataggtcacacttgtttccaactagcatgatc 560 || || ||| ||||| ||||| |||| || ||||||||||| |||| ||||| || Sbjct: 88412 tcttccgtgcttacagcccgtctgtgagcaagatcacacttgttgccaatcagcataatt 88471 Query: 561 gtcatgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatgattaaac 620 ||||| || |||||||| || |||||||||||||||| |||||| || | |||||||| Sbjct: 88472 gtcatatttgcatttgcatgctgccttgcatcttccaaccagctagctaagtgattaaat 88531 Query: 621 gtttccctcct 631 || |||||||| Sbjct: 88532 gtctccctcct 88542
>dbj|AB035919.1| Carica papaya pgp1 mRNA for small GTP-binding protein, complete cds Length = 636 Score = 91.7 bits (46), Expect = 3e-15 Identities = 241/306 (78%) Strand = Plus / Minus Query: 406 cagcagtcttgacaaagccctcctcgacgttttgtgcagtttttgcagatgcctccatga 465 |||||||| ||| ||| ||||||| |||||||| || ||| ||||||| || |||| || Sbjct: 493 cagcagtcctgatgaaggcctcctcaacgttttgagctgttcttgcagacgcttccaaga 434 Query: 466 agatgagaccattctccttggcgaactgctcaccttcctcgaagctcacagcacgtctat 525 | | || |||| ||||| || || |||||||||||||| ||| ||||| | | || Sbjct: 433 atagaagcccatgttcctttgcaaattgctcaccttcctctttgctgacagccctccgat 374 Query: 526 gagataggtcacacttgtttccaactagcatgatcgtcatgttagcatttgcgtgttgcc 585 |||| || ||| ||||||| || | |||||||| |||| || | |||||||| |||| Sbjct: 373 gagaaagatcagacttgttaccgatgagcatgatactcatattggggtttgcgtgctgcc 314 Query: 586 ttgcatcttccagccagcttgcaagatgattaaacgtttccctcctggtgatgtcgtaaa 645 ||||| |||| ||||||||| |||||||| || || || ||||| || ||||| |||| Sbjct: 313 gagcatcctccaaccagcttgctagatgattgaatgtctctctcctagttatgtcataaa 254 Query: 646 ccaaaagagcaccagcggctcccctgtagtatgatctagttatcgatctgaatgattctt 705 ||| || || ||||| ||||| |||||||| ||||| || || |||||||||||||||| Sbjct: 253 ccaggagtgctccagctgctcctctgtagtaagatctggtaatggatctgaatgattctt 194 Query: 706 ggcctg 711 | |||| Sbjct: 193 gacctg 188
>emb|X96771.1|STAGPB1GE S.tuberosum AGPB1 gene Length = 4970 Score = 77.8 bits (39), Expect = 5e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 525 tgagataggtcacacttgtttccaactagcatgatcgtcatgttagcatttgcgtgttgc 584 |||| ||| |||||||||||||| | ||||| || ||||| || |||||||| || ||| Sbjct: 580 tgagctagatcacacttgtttcctatcagcattatggtcatatttgcatttgcatgctgc 521 Query: 585 cttgcatcttccagccagcttgcaagatgattaaacgtttccctcct 631 ||||||||||| ||||| || || || |||||||| ||||||||||| Sbjct: 520 cttgcatcttctagccaactagctaggtgattaaatgtttccctcct 474 Score = 54.0 bits (27), Expect = 7e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 356 ctcattagatacatcaaagacaccatcctgaattttcttatatattg 402 |||||| ||||||||||| || |||||||| ||||||||||| |||| Sbjct: 848 ctcattcgatacatcaaacactccatcctgtattttcttataaattg 802
>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A18 Length = 176755 Score = 77.8 bits (39), Expect = 5e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 475 cattctccttggcgaactgctcaccttcctcgaagctcacagcacgtctatgagataggt 534 |||||| |||||| ||||| |||||||||||| |||| ||||||||||||| ||| |||| Sbjct: 126373 cattctgcttggcaaactgttcaccttcctcgtagctgacagcacgtctatcagagaggt 126314 Query: 535 cacacttgtttccaa 549 | || |||||||||| Sbjct: 126313 cgcatttgtttccaa 126299
>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0688H12 Length = 139279 Score = 77.8 bits (39), Expect = 5e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 475 cattctccttggcgaactgctcaccttcctcgaagctcacagcacgtctatgagataggt 534 |||||| |||||| ||||| |||||||||||| |||| ||||||||||||| ||| |||| Sbjct: 16534 cattctgcttggcaaactgttcaccttcctcgtagctgacagcacgtctatcagagaggt 16475 Query: 535 cacacttgtttccaa 549 | || |||||||||| Sbjct: 16474 cgcatttgtttccaa 16460
>emb|CR933401.1| Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 669 ctgtagtatgatctagttatcgatctgaatgattcttg 706 |||||||||||||||||||| ||||||||||| ||||| Sbjct: 1772 ctgtagtatgatctagttatggatctgaatgactcttg 1809
>gb|U03618.1|PTU03618 Paramecium tetraurelia clone plg-8 guanine nucleotide regulatory protein gene, partial sequence Length = 424 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 669 ctgtagtatgatctagttatcgatctgaatgattcttg 706 |||||||||||||||||||| ||||||||||| ||||| Sbjct: 176 ctgtagtatgatctagttatggatctgaatgactcttg 139
>gb|BT012805.1| Lycopersicon esculentum clone 113821R, mRNA sequence Length = 978 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 440 tgcagtttttgcagatgcctccatgaagatgagaccattctcct 483 ||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 642 tgcagtttttgcagatgtttccatgaagaacagaccattctcct 599
>emb|X71609.1|NTRRGTPB N.tabacum mRNA for ras-related GTP-binding protein Length = 845 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 440 tgcagtttttgcagatgcctccatgaagatgagaccattctcct 483 ||||||||||||||||| |||||||||| ||||||||||||| Sbjct: 558 tgcagtttttgcagatgtttccatgaagaaaagaccattctcct 515
>gb|AY104686.1| Zea mays PCO088233 mRNA sequence Length = 1239 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 440 tgcagtttttgcagatgcctccatgaagatgagaccattctcct 483 ||||||||| ||||||| ||||||||||| ||| |||||||||| Sbjct: 667 tgcagttttagcagatgtctccatgaagaagagcccattctcct 624
>emb|AL161588.2|ATCHRIV84 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 84 Length = 195452 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 363 gatacatcaaagacaccatcctgaattttct 393 |||||||||||||||||||||||||| |||| Sbjct: 59084 gatacatcaaagacaccatcctgaatgttct 59114 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 629 cctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttat 688 |||||||||||| ||||||| | ||| || || ||||| |||||||||||||| || || Sbjct: 59805 cctggtgatgtcataaaccagtaaagctccggctgctcctctgtagtatgatctggtgat 59864 Query: 689 cgatctgaatgattcttg 706 ||||| || |||||||| Sbjct: 59865 ggatctaaaagattcttg 59882
>emb|AL031986.1|ATF4B14 Arabidopsis thaliana DNA chromosome 4, BAC clone F4B14 (ESSA project) Length = 99461 Score = 54.0 bits (27), Expect = 7e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 363 gatacatcaaagacaccatcctgaattttct 393 |||||||||||||||||||||||||| |||| Sbjct: 50888 gatacatcaaagacaccatcctgaatgttct 50918 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 629 cctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttat 688 |||||||||||| ||||||| | ||| || || ||||| |||||||||||||| || || Sbjct: 51609 cctggtgatgtcataaaccagtaaagctccggctgctcctctgtagtatgatctggtgat 51668 Query: 689 cgatctgaatgattcttg 706 ||||| || |||||||| Sbjct: 51669 ggatctaaaagattcttg 51686
>ref|NM_117820.1| Arabidopsis thaliana GTP binding AT4G17160 mRNA, complete cds Length = 618 Score = 52.0 bits (26), Expect = 0.003 Identities = 68/82 (82%) Strand = Plus / Minus Query: 424 cctcctcgacgttttgtgcagtttttgcagatgcctccatgaagatgagaccattctcct 483 |||||||||| || || ||||| || ||||| ||||||||||| || ||||||| |||| Sbjct: 475 cctcctcgacattgtgagcagtcttagcagaggcctccatgaatataagaccatgctccc 416 Query: 484 tggcgaactgctcaccttcctc 505 | || ||||| || |||||||| Sbjct: 415 tagcaaactgttctccttcctc 394
>gb|DQ056652.1| Arabidopsis thaliana putative Ras-related GTP-binding protein (At4g17160) mRNA, complete cds Length = 618 Score = 52.0 bits (26), Expect = 0.003 Identities = 68/82 (82%) Strand = Plus / Minus Query: 424 cctcctcgacgttttgtgcagtttttgcagatgcctccatgaagatgagaccattctcct 483 |||||||||| || || ||||| || ||||| ||||||||||| || ||||||| |||| Sbjct: 475 cctcctcgacattgtgagcagtcttagcagaggcctccatgaatataagaccatgctccc 416 Query: 484 tggcgaactgctcaccttcctc 505 | || ||||| || |||||||| Sbjct: 415 tagcaaactgttctccttcctc 394
>emb|AJ249866.1|CIN249866 Cichorium intybus x Cichorium endivia partial mRNA for GTP binding protein (gtp2 gene) Length = 650 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 441 gcagtttttgcagatgcctccatgaagatgagaccattctc 481 |||||||| ||||||| ||||||||||| ||||||||||| Sbjct: 508 gcagttttagcagatgtctccatgaagaaaagaccattctc 468
>emb|AJ296336.1|CIN296336 Cichorium intybus X Cichorium endivia mRNA for GTP binding protein (chi3154 gene) Length = 797 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 441 gcagtttttgcagatgcctccatgaagatgagaccattctc 481 |||||||| ||||||| ||||||||||| ||||||||||| Sbjct: 519 gcagttttagcagatgtctccatgaagaaaagaccattctc 479
>emb|AJ296335.1|CIN296335 Cichorium intybus X Cichorium endivia mRNA for GTP binding protein (chi3152 gene) Length = 776 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 441 gcagtttttgcagatgcctccatgaagatgagaccattctc 481 |||||||| ||||||| ||||||||||| ||||||||||| Sbjct: 509 gcagttttagcagatgtctccatgaagaaaagaccattctc 469
>emb|AJ296334.1|CIN296334 Cichorium intybus X Cichorium endivia partial mRNA for GTP binding protein (chi3153 gene) Length = 749 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 441 gcagtttttgcagatgcctccatgaagatgagaccattctc 481 |||||||| ||||||| ||||||||||| ||||||||||| Sbjct: 459 gcagttttagcagatgtctccatgaagaaaagaccattctc 419
>emb|AJ296333.1|CIN296333 Cichorium intybus X Cichorium endivia partial mRNA for GTP binding protein (chi3151 gene) Length = 743 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 441 gcagtttttgcagatgcctccatgaagatgagaccattctc 481 |||||||| ||||||| ||||||||||| ||||||||||| Sbjct: 459 gcagttttagcagatgtctccatgaagaaaagaccattctc 419
>gb|U13167.1|CRU13167 Chlamydomonas reinhardtii YptC4 (yptC4) gene, complete cds Length = 3431 Score = 48.1 bits (24), Expect = 0.040 Identities = 42/48 (87%) Strand = Plus / Minus Query: 458 ctccatgaagatgagaccattctccttggcgaactgctcaccttcctc 505 ||||| ||||||||| || | |||||||||||||||||| || ||||| Sbjct: 1346 ctccaggaagatgaggccgtgctccttggcgaactgctcgccctcctc 1299
>emb|AJ574852.2|POP574852 Populus x canescens mRNA for 1-deoxy-D-xylulose-5-phosphate reductoisomerase (ptxa_dxr gene) Length = 1724 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Plus Query: 306 ccacctccagcttggccaggaa 327 |||||||||||||||||||||| Sbjct: 163 ccacctccagcttggccaggaa 184
>gb|L08130.1|VVCPTVC Volvox carteri GTP-binding protein (yptV4) gene, complete CDS Length = 3032 Score = 44.1 bits (22), Expect = 0.63 Identities = 70/86 (81%) Strand = Plus / Minus Query: 534 tcacacttgtttccaactagcatgatcgtcatgttagcatttgcgtgttgccttgcatct 593 ||||| ||||| |||| |||||||| |||||||| | || ||||| |||| ||||| Sbjct: 1424 tcacatttgttgccaataagcatgatggtcatgtttgggttggcgtgctgccgcgcatcc 1365 Query: 594 tccagccagcttgcaagatgattaaa 619 ||||||||||| || ||||| ||||| Sbjct: 1364 tccagccagctggccagatggttaaa 1339
>gb|BC058341.1| Danio rerio RAB14, member RAS oncogene family, like, mRNA (cDNA clone MGC:63643 IMAGE:5605106), complete cds Length = 3156 Score = 44.1 bits (22), Expect = 0.63 Identities = 43/50 (86%) Strand = Plus / Minus Query: 627 ctcctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagta 676 ||||||||||||||||| |||| || || ||||||||||| || ||||| Sbjct: 353 ctcctggtgatgtcgtagaccatcagtgctccagcggctcctctatagta 304
>ref|NM_200683.1| Danio rerio RAB14, member RAS oncogene family, like (rab14l), mRNA Length = 3156 Score = 44.1 bits (22), Expect = 0.63 Identities = 43/50 (86%) Strand = Plus / Minus Query: 627 ctcctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagta 676 ||||||||||||||||| |||| || || ||||||||||| || ||||| Sbjct: 353 ctcctggtgatgtcgtagaccatcagtgctccagcggctcctctatagta 304
>emb|CT010481.8| M.truncatula DNA sequence from clone MTH2-62G7 on chromosome 3, complete sequence Length = 113400 Score = 44.1 bits (22), Expect = 0.63 Identities = 154/198 (77%) Strand = Plus / Minus Query: 435 ttttgtgcagtttttgcagatgcctccatgaagatgagaccattctccttggcgaactgc 494 |||||||| || || ||||| ||||||||||| | || ||||| ||||| || || ||| Sbjct: 92755 ttttgtgctgtcttggcagaagcctccatgaataaaagtccattttcctttgcaaattgc 92696 Query: 495 tcaccttcctcgaagctcacagcacgtctatgagataggtcacacttgtttccaactagc 554 || || ||||| |||||| || | || ||||| || ||||||||||| || | ||| Sbjct: 92695 tctccctcctctttgctcacggcccttcggtgagacagatcacacttgttccctatgagc 92636 Query: 555 atgatcgtcatgttagcatttgcgtgttgccttgcatcttccagccagcttgcaagatga 614 |||| ||||| |||| ||| || || |||| |||||||||| ||| ||||| | |||| Sbjct: 92635 gtgattgtcatattaggattggcatgctgccgcgcatcttccaaccaacttgccaaatga 92576 Query: 615 ttaaacgtttccctcctg 632 ||||| || || |||||| Sbjct: 92575 ttaaatgtctctctcctg 92558
>emb|AL807764.9| Mouse DNA sequence from clone RP23-400F8 on chromosome 4, complete sequence Length = 226637 Score = 44.1 bits (22), Expect = 0.63 Identities = 28/30 (93%) Strand = Plus / Plus Query: 295 atgaggcaccaccacctccagcttggccag 324 ||||||||||||||| ||||||||| |||| Sbjct: 180591 atgaggcaccaccacatccagcttgtccag 180620
>emb|AJ249867.1|CIN249867 Cichorium intybus X Cichorium endivia partial mRNA for GTP binding protein (b1.5 gene) Length = 501 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 441 gcagtttttgcagatgcctccatgaagatgagaccattctc 481 |||||||| || |||| ||||||||| | |||||||||||| Sbjct: 250 gcagttttagctgatgtctccatgaaaaagagaccattctc 210
>emb|AJ249865.1|CIN249865 Cichorium intybus x Cichorium endivia partial mRNA for GTP binding protein (gtp1 gene) Length = 767 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 441 gcagtttttgcagatgcctccatgaagatgagaccattctc 481 |||||||| || |||| ||||||||| | |||||||||||| Sbjct: 623 gcagttttagctgatgtctccatgaaaaagagaccattctc 583
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 tctccttggcgaactgctca 497 |||||||||||||||||||| Sbjct: 211839 tctccttggcgaactgctca 211820
>gb|AY542998.1| Bigelowiella natans RAB2 mRNA, complete cds Length = 952 Score = 40.1 bits (20), Expect = 9.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 636 atgtcgtaaaccaaaagagcaccagcggctcccctgtagtatgatctagttatcgatctg 695 ||||| ||||| | |||||||||||| ||||| | |||||| ||||| || || |||| | Sbjct: 332 atgtcataaacgagaagagcaccagcagctccacggtagtaggatctcgtaattgatcgg 273 Query: 696 aatgattc 703 || ||||| Sbjct: 272 aaagattc 265
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete sequence Length = 150155 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 catcctgaattttcttatatattg 402 |||||||||||||| ||||||||| Sbjct: 89004 catcctgaattttcatatatattg 89027
>gb|BC045374.1| Danio rerio RAB14, member RAS oncogene family, mRNA (cDNA clone MGC:55532 IMAGE:2642114), complete cds Length = 2415 Score = 40.1 bits (20), Expect = 9.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 629 cctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagta 676 |||||||||||| || |||| || || ||||||||||| |||||||| Sbjct: 386 cctggtgatgtcatacaccatgagggccccagcggctcctctgtagta 339
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccacctccagcttggccagg 325 |||||||||||||||||||| Sbjct: 4517974 ccacctccagcttggccagg 4517993
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccacctccagcttggccagg 325 |||||||||||||||||||| Sbjct: 5624589 ccacctccagcttggccagg 5624608
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 catcctgaattttcttatatattg 402 |||||||||||||| ||||||||| Sbjct: 27215391 catcctgaattttcatatatattg 27215368
>gb|AC021016.5| Homo sapiens BAC clone RP11-378A13 from 2, complete sequence Length = 191755 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 tccagcagtcttgacaaagc 423 |||||||||||||||||||| Sbjct: 190798 tccagcagtcttgacaaagc 190817
>ref|XM_384511.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04335.1) partial mRNA Length = 1584 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 tcttgacaaagccctcctcg 431 |||||||||||||||||||| Sbjct: 1210 tcttgacaaagccctcctcg 1191
>gb|AC126262.4| Mus musculus BAC clone RP23-359F12 from chromosome 12, complete sequence Length = 208710 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 acaccatcctgaattttctt 394 |||||||||||||||||||| Sbjct: 163435 acaccatcctgaattttctt 163416
>emb|Z73932.1|LJRAB1C L.japonicus mRNA for small GTP-binding protein, RAB1C Length = 979 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 tcacacttgtttccaactag 553 |||||||||||||||||||| Sbjct: 490 tcacacttgtttccaactag 471
>emb|AL031643.1|HS769D20 Human DNA sequence from clone RP4-769D20 on chromosome Xp21.1-21.3 Contains the 5' end of four variants of the DMD gene for dystrophin (muscular dystrophy, Duchenne and Becker types), complete sequence Length = 133889 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 cctgaattttcttatatatt 401 |||||||||||||||||||| Sbjct: 56500 cctgaattttcttatatatt 56519
>emb|AL590362.12| Human DNA sequence from clone RP11-214G2 on chromosome 9 Contains a CpG island, complete sequence Length = 154698 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 aaatgaactgaacctatttt 120 |||||||||||||||||||| Sbjct: 80878 aaatgaactgaacctatttt 80897
>emb|AL391650.18| Human DNA sequence from clone RP11-96L14 on chromosome 1 Contains the EXTL1 gene for exostoses (multiple)-like 1, the SLC30A2 gene for solute carrier family 30 (zinc transporter) member 2, the RNF28 gene for ring finger protein 28, a novel gene, a novel gene (FLJ14050), the gene for zinc finger protein (ZT86), a novel gene, the 5' end of the gene for connector enhancer of KSR-like (Drosophila kinase suppressor of ras) (CNK1) and four CpG islands, complete sequence Length = 176006 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 510 ctcacagcacgtctatgagatagg 533 |||||||||| ||||||||||||| Sbjct: 12876 ctcacagcacctctatgagatagg 12853
>ref|XM_501209.1| Yarrowia lipolytica CLIB122, YALI0B22154g predicted mRNA Length = 603 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 cttgtttccaactagcatga 558 |||||||||||||||||||| Sbjct: 369 cttgtttccaactagcatga 350
>gb|AC158971.4| Mus musculus chromosome 15, clone RP24-204H21, complete sequence Length = 173184 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 catcctgaattttcttatat 398 |||||||||||||||||||| Sbjct: 160193 catcctgaattttcttatat 160212
>emb|AL021938.1|HS232K4 Human DNA sequence from clone RP1-232K4 on chromosome 6p22.3 Contains the 3'end of the JMJ gene for jumonji protein and 2 CpG islands, complete sequence Length = 198161 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ataatgcaacaggtattgta 219 |||||||||||||||||||| Sbjct: 105223 ataatgcaacaggtattgta 105204
>emb|Y17187.1|PFL17187 Platichthys flesus Ki-ras gene (exons 1, 2, 3, and 4b) Length = 711 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 aggtcacacttgtttccaac 550 |||||||||||||||||||| Sbjct: 436 aggtcacacttgtttccaac 417
>ref|XM_697422.1| PREDICTED: Danio rerio hypothetical protein LOC554726 (LOC554726), mRNA Length = 1654 Score = 40.1 bits (20), Expect = 9.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 629 cctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagta 676 |||||||||||| || |||| || || ||||||||||| |||||||| Sbjct: 386 cctggtgatgtcatacaccatgagggccccagcggctcctctgtagta 339
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 9.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 catcctgaattttcttatatattg 402 |||||||||||||| ||||||||| Sbjct: 27306714 catcctgaattttcatatatattg 27306691
>ref|NM_201495.1| Danio rerio RAB14, member RAS oncogene family (rab14), mRNA Length = 2415 Score = 40.1 bits (20), Expect = 9.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 629 cctggtgatgtcgtaaaccaaaagagcaccagcggctcccctgtagta 676 |||||||||||| || |||| || || ||||||||||| |||||||| Sbjct: 386 cctggtgatgtcatacaccatgagggccccagcggctcctctgtagta 339
>gb|AC008281.3| Homo sapiens BAC clone RP11-481E6 from 2, complete sequence Length = 131085 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 caccttgggaagatgaggca 302 |||||||||||||||||||| Sbjct: 91280 caccttgggaagatgaggca 91299
>gb|AC108415.10| Mus musculus chromosome 15, clone RP23-341K14, complete sequence Length = 194640 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 catcctgaattttcttatat 398 |||||||||||||||||||| Sbjct: 108833 catcctgaattttcttatat 108814
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 cttgtttccaactagcatga 558 |||||||||||||||||||| Sbjct: 2905046 cttgtttccaactagcatga 2905027
>dbj|AB024994.1| Cicer arietinum mRNA for rab-type small GTP-binding protein, complete cds Length = 1074 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 tcacacttgtttccaactag 553 |||||||||||||||||||| Sbjct: 477 tcacacttgtttccaactag 458 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,371,921 Number of Sequences: 3902068 Number of extensions: 6371921 Number of successful extensions: 123423 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 122891 Number of HSP's gapped (non-prelim): 520 length of query: 720 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 697 effective length of database: 17,143,297,704 effective search space: 11948878499688 effective search space used: 11948878499688 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)