ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasdo03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1K0859_HUMAN (Q8N6R0) Protein KIAA0859 54 3e-07
2K0859_MOUSE (Q91YR5) Protein KIAA0859 51 3e-06
3ECE2_HUMAN (O60344) Endothelin-converting enzyme 2 (EC 3.4.24.71... 46 1e-04
4ECE2_BOVIN (Q10711) Endothelin-converting enzyme 2 (EC 3.4.24.71... 44 5e-04
5Y829_SYNY3 (Q55423) Putative methyltransferase sll0829 (EC 2.1.1.-) 39 0.015
6YIG4_YEAST (P40516) Hypothetical 28.7 kDa protein in RNR3-ARC15 ... 32 1.8
7SPD1_DATST (Q96556) Spermidine synthase 1 (EC 2.5.1.16) (Putresc... 32 2.3
8YHRE_SCHPO (Q9P7Z3) Hypothetical protein C839.14c in chromosome II 32 2.3
9KEX2_YEAST (P13134) Kexin precursor (EC 3.4.21.61) (KEX2 proteas... 30 6.8
10PTN21_HUMAN (Q16825) Tyrosine-protein phosphatase non-receptor t... 30 8.9
11BACB_BACLI (O68007) Bacitracin synthetase 2 (BA2) [Includes: ATP... 30 8.9
12FADH_METMR (P47734) S-(hydroxymethyl)glutathione dehydrogenase (... 30 8.9

>K0859_HUMAN (Q8N6R0) Protein KIAA0859|
          Length = 699

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
 Frame = -2

Query: 680 SSVVIEHMKEKHMDI-PQLTYMQLDVRDMSFFGDGSFDCIIDKGTLDAMMCGDDAP--HG 510
           S VVI+ MKE +    PQ++++++D+  M F  D SF  ++DKGTLDA++  ++      
Sbjct: 80  SEVVIKQMKECNATRRPQMSFLKMDMTQMEF-PDASFQVVLDKGTLDAVLTDEEEKTLQQ 138

Query: 509 AYKMLTEVARLMRPGGIYILIT 444
             +ML EV R+++ GG Y+ I+
Sbjct: 139 VDRMLAEVGRVLQVGGRYLCIS 160



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>K0859_MOUSE (Q91YR5) Protein KIAA0859|
          Length = 698

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 28/82 (34%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
 Frame = -2

Query: 680 SSVVIEHMKEKHMDI-PQLTYMQLDVRDMSFFGDGSFDCIIDKGTLDAMMCGDD--APHG 510
           S VVI+ MKE++    P ++++++D+  + F  D +F  ++DKGTLDA++  ++      
Sbjct: 80  SEVVIKQMKERNGSRRPHMSFLKMDMTQLEF-PDATFQVVLDKGTLDAVLTDEEEVTLRQ 138

Query: 509 AYKMLTEVARLMRPGGIYILIT 444
             +ML EV R+++ GG Y+ I+
Sbjct: 139 VDRMLAEVGRVLQVGGRYLCIS 160



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>ECE2_HUMAN (O60344) Endothelin-converting enzyme 2 (EC 3.4.24.71) (ECE-2)|
          Length = 787

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 20/48 (41%), Positives = 32/48 (66%)
 Frame = -2

Query: 659 MKEKHMDIPQLTYMQLDVRDMSFFGDGSFDCIIDKGTLDAMMCGDDAP 516
           M+ +H  +PQL +  +DVR + F    SFD +++KGTLDA++ G+  P
Sbjct: 1   MQARHAHVPQLRWETMDVRKLDF-PSASFDVVLEKGTLDALLAGERDP 47



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>ECE2_BOVIN (Q10711) Endothelin-converting enzyme 2 (EC 3.4.24.71) (ECE-2)|
          Length = 787

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 19/48 (39%), Positives = 32/48 (66%)
 Frame = -2

Query: 659 MKEKHMDIPQLTYMQLDVRDMSFFGDGSFDCIIDKGTLDAMMCGDDAP 516
           M+ ++  +P L +  +DVR + F   GSFD +++KGTLDA++ G+  P
Sbjct: 1   MRARYAHVPTLRWETMDVRALGF-PSGSFDVVLEKGTLDALLTGEQDP 47



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>Y829_SYNY3 (Q55423) Putative methyltransferase sll0829 (EC 2.1.1.-)|
          Length = 212

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 23/75 (30%), Positives = 38/75 (50%)
 Frame = -2

Query: 644 MDIPQLTYMQLDVRDMSFFGDGSFDCIIDKGTLDAMMCGDDAPHGAYKMLTEVARLMRPG 465
           +++PQ TY+Q    D+ F G+G FD +     L  M      P     +++ V R+++PG
Sbjct: 85  INVPQATYVQGLAEDLPF-GEGEFDLVHTSVALHEM-----TPAQLQSIISGVHRVLKPG 138

Query: 464 GIYILITYGAPKERL 420
           GI+ L+    P   L
Sbjct: 139 GIFALVDLHRPSNWL 153



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>YIG4_YEAST (P40516) Hypothetical 28.7 kDa protein in RNR3-ARC15 intergenic|
           region
          Length = 257

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
 Frame = -2

Query: 629 LTYMQLDVRDMSFFGD---GSFDCIIDKGTLDAMMCGDDAPHGAYKMLT----EVARLMR 471
           +++ Q D+    F GD   G +D ++DKGTLDA+       +G   ++      V R+++
Sbjct: 146 ISFQQADI----FSGDWKPGKYDIVLDKGTLDAISLSGMKINGKLDVVDVYAGVVERILK 201

Query: 470 PGGIYILITYGAPKERL 420
             GI+++ +    ++ L
Sbjct: 202 KDGIFLITSCNFTQDEL 218



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>SPD1_DATST (Q96556) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine|
           aminopropyltransferase 1) (SPDSY 1)
          Length = 308

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 22/93 (23%)
 Frame = -2

Query: 671 VIEHMKEKHMDIPQLTYMQLDVRDMSF---------------FGDG-SFDCIIDKGTLDA 540
           V  H   + +DI ++  M +DV    F                GDG +F   + +GT DA
Sbjct: 110 VSRHSSVEQIDICEIDKMVIDVSKQFFPNVAIGYEDPRVKLHVGDGVAFLKFVAEGTYDA 169

Query: 539 MMCGDDAPHGAYKMLTE------VARLMRPGGI 459
           ++     P G  + L E      VAR +RPGG+
Sbjct: 170 VIVDSSDPIGPAQELFEKPFFESVARALRPGGV 202



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>YHRE_SCHPO (Q9P7Z3) Hypothetical protein C839.14c in chromosome II|
          Length = 238

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = -2

Query: 632 QLTYMQLDVRDMSFFGDGSFDCIIDKGTLDAMMCGDDAPHGA---YKMLTEVARLMRPGG 462
           ++ + QLD+   S F    +D I+DKGT DA+    +   G       +  V  ++ P G
Sbjct: 121 KVKFQQLDIIKDSKFCSKDWDLILDKGTFDAISLSGELLDGRPLNSVYVDRVRGMLSPNG 180

Query: 461 IYIL 450
           I+++
Sbjct: 181 IFLI 184



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>KEX2_YEAST (P13134) Kexin precursor (EC 3.4.21.61) (KEX2 protease) (Proteinase|
           YSCF)
          Length = 814

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +2

Query: 164 KTWHHLDQQPWNYLQSLYLSCNKHK*NVTLDP*ERSQVVIDHPLSVQLSPSWRVQH 331
           KTW +++ Q W YL +LY+S + +    TL+      V+     S+Q +   R++H
Sbjct: 457 KTWENVNAQTWFYLPTLYVSQSTNSTEETLE-----SVITISEKSLQDANFKRIEH 507



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>PTN21_HUMAN (Q16825) Tyrosine-protein phosphatase non-receptor type 21 (EC|
            3.1.3.48) (Protein-tyrosine phosphatase D1)
          Length = 1174

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +3

Query: 282  LTIHCQCNFLHHGVCSTVAPFHLVFRCRWHNVKLNIPMASDLVQKCQTFLRSTIC-YQYV 458
            L +HC       GV   V    ++  C  HN  L+IP   D++++ +  L  T+C Y +V
Sbjct: 1104 LLVHCSAGVGRTGV---VILSEIMIACLEHNEVLDIPRVLDMLRQQRMMLVQTLCQYTFV 1160



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>BACB_BACLI (O68007) Bacitracin synthetase 2 (BA2) [Includes: ATP-dependent|
            lysine adenylase (LysA) (Lysine activase); ATP-dependent
            D-ornithine adenylase (D-OrnA) (D-ornithine activase);
            Ornithine racemase (EC 5.1.1.12)]
          Length = 2607

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 503  KMLTEVARLMRPGGIYILITYGAPKERLTLL 411
            +MLT +  +++ GG Y+ I  G PKER+  L
Sbjct: 1612 EMLTGILAVLKAGGAYMPIDPGLPKERIQYL 1642



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>FADH_METMR (P47734) S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284)|
           (Glutathione-dependent formaldehyde dehydrogenase) (FDH)
           (FALDH)
          Length = 424

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 22/62 (35%), Positives = 29/62 (46%)
 Frame = -2

Query: 587 GDGSFDCIIDKGTLDAMMCGDDAPHGAYKMLTEVARLMRPGGIYILITYGAPKERLTLLN 408
           G GSFD ++DK    A+  G D PH    +L E     R GG     T   P   + LL+
Sbjct: 302 GAGSFDAVLDKAKA-ALYLGTDRPH----VLREAIMCCRKGG-----TVSIPGVYVGLLD 351

Query: 407 QV 402
           Q+
Sbjct: 352 QL 353


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,059,664
Number of Sequences: 219361
Number of extensions: 2245259
Number of successful extensions: 5202
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5201
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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