Clone Name | rbasdo03 |
---|---|
Clone Library Name | barley_pub |
>K0859_HUMAN (Q8N6R0) Protein KIAA0859| Length = 699 Score = 54.3 bits (129), Expect = 3e-07 Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 3/82 (3%) Frame = -2 Query: 680 SSVVIEHMKEKHMDI-PQLTYMQLDVRDMSFFGDGSFDCIIDKGTLDAMMCGDDAP--HG 510 S VVI+ MKE + PQ++++++D+ M F D SF ++DKGTLDA++ ++ Sbjct: 80 SEVVIKQMKECNATRRPQMSFLKMDMTQMEF-PDASFQVVLDKGTLDAVLTDEEEKTLQQ 138 Query: 509 AYKMLTEVARLMRPGGIYILIT 444 +ML EV R+++ GG Y+ I+ Sbjct: 139 VDRMLAEVGRVLQVGGRYLCIS 160
>K0859_MOUSE (Q91YR5) Protein KIAA0859| Length = 698 Score = 51.2 bits (121), Expect = 3e-06 Identities = 28/82 (34%), Positives = 52/82 (63%), Gaps = 3/82 (3%) Frame = -2 Query: 680 SSVVIEHMKEKHMDI-PQLTYMQLDVRDMSFFGDGSFDCIIDKGTLDAMMCGDD--APHG 510 S VVI+ MKE++ P ++++++D+ + F D +F ++DKGTLDA++ ++ Sbjct: 80 SEVVIKQMKERNGSRRPHMSFLKMDMTQLEF-PDATFQVVLDKGTLDAVLTDEEEVTLRQ 138 Query: 509 AYKMLTEVARLMRPGGIYILIT 444 +ML EV R+++ GG Y+ I+ Sbjct: 139 VDRMLAEVGRVLQVGGRYLCIS 160
>ECE2_HUMAN (O60344) Endothelin-converting enzyme 2 (EC 3.4.24.71) (ECE-2)| Length = 787 Score = 45.8 bits (107), Expect = 1e-04 Identities = 20/48 (41%), Positives = 32/48 (66%) Frame = -2 Query: 659 MKEKHMDIPQLTYMQLDVRDMSFFGDGSFDCIIDKGTLDAMMCGDDAP 516 M+ +H +PQL + +DVR + F SFD +++KGTLDA++ G+ P Sbjct: 1 MQARHAHVPQLRWETMDVRKLDF-PSASFDVVLEKGTLDALLAGERDP 47
>ECE2_BOVIN (Q10711) Endothelin-converting enzyme 2 (EC 3.4.24.71) (ECE-2)| Length = 787 Score = 43.9 bits (102), Expect = 5e-04 Identities = 19/48 (39%), Positives = 32/48 (66%) Frame = -2 Query: 659 MKEKHMDIPQLTYMQLDVRDMSFFGDGSFDCIIDKGTLDAMMCGDDAP 516 M+ ++ +P L + +DVR + F GSFD +++KGTLDA++ G+ P Sbjct: 1 MRARYAHVPTLRWETMDVRALGF-PSGSFDVVLEKGTLDALLTGEQDP 47
>Y829_SYNY3 (Q55423) Putative methyltransferase sll0829 (EC 2.1.1.-)| Length = 212 Score = 38.9 bits (89), Expect = 0.015 Identities = 23/75 (30%), Positives = 38/75 (50%) Frame = -2 Query: 644 MDIPQLTYMQLDVRDMSFFGDGSFDCIIDKGTLDAMMCGDDAPHGAYKMLTEVARLMRPG 465 +++PQ TY+Q D+ F G+G FD + L M P +++ V R+++PG Sbjct: 85 INVPQATYVQGLAEDLPF-GEGEFDLVHTSVALHEM-----TPAQLQSIISGVHRVLKPG 138 Query: 464 GIYILITYGAPKERL 420 GI+ L+ P L Sbjct: 139 GIFALVDLHRPSNWL 153
>YIG4_YEAST (P40516) Hypothetical 28.7 kDa protein in RNR3-ARC15 intergenic| region Length = 257 Score = 32.0 bits (71), Expect = 1.8 Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 7/77 (9%) Frame = -2 Query: 629 LTYMQLDVRDMSFFGD---GSFDCIIDKGTLDAMMCGDDAPHGAYKMLT----EVARLMR 471 +++ Q D+ F GD G +D ++DKGTLDA+ +G ++ V R+++ Sbjct: 146 ISFQQADI----FSGDWKPGKYDIVLDKGTLDAISLSGMKINGKLDVVDVYAGVVERILK 201 Query: 470 PGGIYILITYGAPKERL 420 GI+++ + ++ L Sbjct: 202 KDGIFLITSCNFTQDEL 218
>SPD1_DATST (Q96556) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine| aminopropyltransferase 1) (SPDSY 1) Length = 308 Score = 31.6 bits (70), Expect = 2.3 Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 22/93 (23%) Frame = -2 Query: 671 VIEHMKEKHMDIPQLTYMQLDVRDMSF---------------FGDG-SFDCIIDKGTLDA 540 V H + +DI ++ M +DV F GDG +F + +GT DA Sbjct: 110 VSRHSSVEQIDICEIDKMVIDVSKQFFPNVAIGYEDPRVKLHVGDGVAFLKFVAEGTYDA 169 Query: 539 MMCGDDAPHGAYKMLTE------VARLMRPGGI 459 ++ P G + L E VAR +RPGG+ Sbjct: 170 VIVDSSDPIGPAQELFEKPFFESVARALRPGGV 202
>YHRE_SCHPO (Q9P7Z3) Hypothetical protein C839.14c in chromosome II| Length = 238 Score = 31.6 bits (70), Expect = 2.3 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Frame = -2 Query: 632 QLTYMQLDVRDMSFFGDGSFDCIIDKGTLDAMMCGDDAPHGA---YKMLTEVARLMRPGG 462 ++ + QLD+ S F +D I+DKGT DA+ + G + V ++ P G Sbjct: 121 KVKFQQLDIIKDSKFCSKDWDLILDKGTFDAISLSGELLDGRPLNSVYVDRVRGMLSPNG 180 Query: 461 IYIL 450 I+++ Sbjct: 181 IFLI 184
>KEX2_YEAST (P13134) Kexin precursor (EC 3.4.21.61) (KEX2 protease) (Proteinase| YSCF) Length = 814 Score = 30.0 bits (66), Expect = 6.8 Identities = 17/56 (30%), Positives = 30/56 (53%) Frame = +2 Query: 164 KTWHHLDQQPWNYLQSLYLSCNKHK*NVTLDP*ERSQVVIDHPLSVQLSPSWRVQH 331 KTW +++ Q W YL +LY+S + + TL+ V+ S+Q + R++H Sbjct: 457 KTWENVNAQTWFYLPTLYVSQSTNSTEETLE-----SVITISEKSLQDANFKRIEH 507
>PTN21_HUMAN (Q16825) Tyrosine-protein phosphatase non-receptor type 21 (EC| 3.1.3.48) (Protein-tyrosine phosphatase D1) Length = 1174 Score = 29.6 bits (65), Expect = 8.9 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = +3 Query: 282 LTIHCQCNFLHHGVCSTVAPFHLVFRCRWHNVKLNIPMASDLVQKCQTFLRSTIC-YQYV 458 L +HC GV V ++ C HN L+IP D++++ + L T+C Y +V Sbjct: 1104 LLVHCSAGVGRTGV---VILSEIMIACLEHNEVLDIPRVLDMLRQQRMMLVQTLCQYTFV 1160
>BACB_BACLI (O68007) Bacitracin synthetase 2 (BA2) [Includes: ATP-dependent| lysine adenylase (LysA) (Lysine activase); ATP-dependent D-ornithine adenylase (D-OrnA) (D-ornithine activase); Ornithine racemase (EC 5.1.1.12)] Length = 2607 Score = 29.6 bits (65), Expect = 8.9 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = -2 Query: 503 KMLTEVARLMRPGGIYILITYGAPKERLTLL 411 +MLT + +++ GG Y+ I G PKER+ L Sbjct: 1612 EMLTGILAVLKAGGAYMPIDPGLPKERIQYL 1642
>FADH_METMR (P47734) S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284)| (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) Length = 424 Score = 29.6 bits (65), Expect = 8.9 Identities = 22/62 (35%), Positives = 29/62 (46%) Frame = -2 Query: 587 GDGSFDCIIDKGTLDAMMCGDDAPHGAYKMLTEVARLMRPGGIYILITYGAPKERLTLLN 408 G GSFD ++DK A+ G D PH +L E R GG T P + LL+ Sbjct: 302 GAGSFDAVLDKAKA-ALYLGTDRPH----VLREAIMCCRKGG-----TVSIPGVYVGLLD 351 Query: 407 QV 402 Q+ Sbjct: 352 QL 353 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,059,664 Number of Sequences: 219361 Number of extensions: 2245259 Number of successful extensions: 5202 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 5067 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5201 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)