ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasdn23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186358.1| Oryza sativa (japonica cultivar-group), mRNA 603 e-169
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 392 e-106
3dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic D... 392 e-106
4dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
6dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
7dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
8dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
9dbj|AK119614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
10dbj|AK106015.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
11gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-1... 54 7e-04
12gb|DQ226578.1| Boechera divaricarpa isolate SLW-2-D02 mRNA sequence 50 0.011
13ref|NM_179910.2| Arabidopsis thaliana catalytic AT2G35100 mRNA, ... 44 0.65
14gb|BT015854.1| Arabidopsis thaliana At2g35100 gene, complete cds 44 0.65
15gb|BT015054.1| Arabidopsis thaliana At2g35100 gene, complete cds 44 0.65
16gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map... 44 0.65
17emb|BX820307.1|CNS0A9HK Arabidopsis thaliana Full-length cDNA Co... 44 0.65
18emb|BX818977.1|CNS0A84Z Arabidopsis thaliana Full-length cDNA Co... 44 0.65
19gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, comple... 44 0.65
20ref|NM_123861.2| Arabidopsis thaliana catalytic AT5G44930 transc... 42 2.6
21ref|NM_180801.1| Arabidopsis thaliana catalytic AT5G44930 transc... 42 2.6
22gb|AC146308.2| Medicago truncatula clone mth2-10a12, complete se... 42 2.6
23gb|AC137554.15| Medicago truncatula clone mth2-17j18, complete s... 42 2.6
24gb|AC150440.3| Medicago truncatula chromosome 7 BAC clone mth2-1... 42 2.6
25gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 42 2.6
26gb|AY048259.1| Arabidopsis thaliana AT5g44930/K21C13_11 mRNA, co... 42 2.6
27dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
28dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
29gb|BT002634.1| Arabidopsis thaliana At5g44930/K21C13_11 gene, co... 42 2.6
30dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.6
31dbj|AB010693.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.6
32emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4,... 42 2.6
33emb|AL844593.6| Mouse DNA sequence from clone RP23-227F18 on chr... 42 2.6 
>ref|NM_186358.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1362

 Score =  603 bits (304), Expect = e-169
 Identities = 502/568 (88%)
 Strand = Plus / Minus

                                                                        
Query: 126  gaacagatgcacgagcaatcagtttcattagtgcctctttcaactaggcgtttgttccgg 185
            |||||||||||||||||||| ||| |||| || |||||||||||||||||||| |  |||
Sbjct: 1334 gaacagatgcacgagcaatctgttccattggtacctctttcaactaggcgtttatcgcgg 1275

                                                                        
Query: 186  ttaatcaacagcttgatcagtggtgctttcatggaaacttggcgccatatttgattcact 245
            ||||||||||||||||||| |||||| ||    ||||||||| ||||||| |||||||||
Sbjct: 1274 ttaatcaacagcttgatcaatggtgcctttgaagaaacttggtgccatatctgattcact 1215

                                                                        
Query: 246  ggcccattcggatcttcatactcaaagtaatgttttaccctttgtatttctctttgatac 305
            || || || ||||||||||||||||| |||||||||||| ||| ||||||||| || |||
Sbjct: 1214 ggtccgtttggatcttcatactcaaaataatgttttaccttttttatttctctctggtac 1155

                                                                        
Query: 306  tccagaatccgctctgaactgactttccgaagcattgaagttaagaatccaggctgtatg 365
            || ||||||| || |||||||| |   |||||  |||| ||||| |||||||||||||  
Sbjct: 1154 tctagaatcctctgtgaactgattcctcgaagtgttgatgttaaaaatccaggctgtaca 1095

                                                                        
Query: 366  gccttgcttgtgtcaacaaaaattgatatattactgtagtctataacatcttcgaatggt 425
            ||||||||||| |||||||| |||||||| || ||||| |||||||||||||| ||||||
Sbjct: 1094 gccttgcttgtctcaacaaatattgatatgtttctgtaatctataacatcttcaaatggt 1035

                                                                        
Query: 426  aactcaatgtgatcgctaactataacaggaacgcataaactgacaagtgcatcaaacaat 485
            || ||||||| |||||| |||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 1034 aattcaatgtaatcgctgactataacaggaacacataaactgacaagcgcatcaaacaat 975

                                                                        
Query: 486  ctgcacgccgagggagtatctccagcaggatgcaggcagaacttagatgagtgcattcct 545
            ||||| |||||||||||||||||||||||||| |||||||| || |||||||||||||||
Sbjct: 974  ctgcatgccgagggagtatctccagcaggatggaggcagaatttggatgagtgcattcct 915

                                                                        
Query: 546  tgcgtagccatacgccgactcacccttgattgggctccatgttttatgattacatctccc 605
             | ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| ||
Sbjct: 914  cgtgtagccatacgcctactctcccttgactgggctccatgttttatgattacatctgcc 855

                                                                        
Query: 606  tcattttcaagaacttgaaaaagtgtatcacggatcttcccgccctcctttcggtaccgg 665
            |||||||||||||||||||| || |||||||| | |||||| ||||||||||| ||||||
Sbjct: 854  tcattttcaagaacttgaaacagcgtatcacgcaccttcccaccctcctttcgataccgg 795

                                        
Query: 666  ttgcccatgaaaaacagcaatgcaggcc 693
            ||||||||||| || ||||||| |||||
Sbjct: 794  ttgcccatgaagaatagcaatgaaggcc 767
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  392 bits (198), Expect = e-106
 Identities = 321/362 (88%)
 Strand = Plus / Minus

                                                                            
Query: 290      tatttctctttgatactccagaatccgctctgaactgactttccgaagcattgaagttaa 349
                ||||||||| || ||||| ||||||| || |||||||| |   |||||  |||| |||||
Sbjct: 22729456 tatttctctctggtactctagaatcctctgtgaactgattcctcgaagtgttgatgttaa 22729397

                                                                            
Query: 350      gaatccaggctgtatggccttgcttgtgtcaacaaaaattgatatattactgtagtctat 409
                 |||||||||||||  ||||||||||| |||||||| |||||||| || ||||| |||||
Sbjct: 22729396 aaatccaggctgtacagccttgcttgtctcaacaaatattgatatgtttctgtaatctat 22729337

                                                                            
Query: 410      aacatcttcgaatggtaactcaatgtgatcgctaactataacaggaacgcataaactgac 469
                ||||||||| |||||||| ||||||| |||||| |||||||||||||| |||||||||||
Sbjct: 22729336 aacatcttcaaatggtaattcaatgtaatcgctgactataacaggaacacataaactgac 22729277

                                                                            
Query: 470      aagtgcatcaaacaatctgcacgccgagggagtatctccagcaggatgcaggcagaactt 529
                ||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||
Sbjct: 22729276 aagcgcatcaaacaatctgcatgccgagggagtatctccagcaggatggaggcagaattt 22729217

                                                                            
Query: 530      agatgagtgcattccttgcgtagccatacgccgactcacccttgattgggctccatgttt 589
                 ||||||||||||||| | ||||||||||||| |||| ||||||| ||||||||||||||
Sbjct: 22729216 ggatgagtgcattcctcgtgtagccatacgcctactctcccttgactgggctccatgttt 22729157

                                                                            
Query: 590      tatgattacatctccctcattttcaagaacttgaaaaagtgtatcacggatcttcccgcc 649
                ||||||||||||| |||||||||||||||||||||| || |||||||| | |||||| ||
Sbjct: 22729156 tatgattacatctgcctcattttcaagaacttgaaacagcgtatcacgcaccttcccacc 22729097

                  
Query: 650      ct 651
                ||
Sbjct: 22729096 ct 22729095



 Score =  165 bits (83), Expect = 3e-37
 Identities = 140/159 (88%)
 Strand = Plus / Minus

                                                                            
Query: 126      gaacagatgcacgagcaatcagtttcattagtgcctctttcaactaggcgtttgttccgg 185
                |||||||||||||||||||| ||| |||| || |||||||||||||||||||| |  |||
Sbjct: 22729998 gaacagatgcacgagcaatctgttccattggtacctctttcaactaggcgtttatcgcgg 22729939

                                                                            
Query: 186      ttaatcaacagcttgatcagtggtgctttcatggaaacttggcgccatatttgattcact 245
                ||||||||||||||||||| |||||| ||    ||||||||| ||||||| |||||||||
Sbjct: 22729938 ttaatcaacagcttgatcaatggtgcctttgaagaaacttggtgccatatctgattcact 22729879

                                                       
Query: 246      ggcccattcggatcttcatactcaaagtaatgttttacc 284
                || || || ||||||||||||||||| ||||||||||||
Sbjct: 22729878 ggtccgtttggatcttcatactcaaaataatgttttacc 22729840



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                             
Query: 649      cctcctttcggtaccggttgcccatgaaaaacagcaatgcaggcc 693
                |||||||||| ||||||||||||||||| || ||||||| |||||
Sbjct: 22727339 cctcctttcgataccggttgcccatgaagaatagcaatgaaggcc 22727295
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>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1092_A07
          Length = 137081

 Score =  392 bits (198), Expect = e-106
 Identities = 321/362 (88%)
 Strand = Plus / Minus

                                                                         
Query: 290   tatttctctttgatactccagaatccgctctgaactgactttccgaagcattgaagttaa 349
             ||||||||| || ||||| ||||||| || |||||||| |   |||||  |||| |||||
Sbjct: 48798 tatttctctctggtactctagaatcctctgtgaactgattcctcgaagtgttgatgttaa 48739

                                                                         
Query: 350   gaatccaggctgtatggccttgcttgtgtcaacaaaaattgatatattactgtagtctat 409
              |||||||||||||  ||||||||||| |||||||| |||||||| || ||||| |||||
Sbjct: 48738 aaatccaggctgtacagccttgcttgtctcaacaaatattgatatgtttctgtaatctat 48679

                                                                         
Query: 410   aacatcttcgaatggtaactcaatgtgatcgctaactataacaggaacgcataaactgac 469
             ||||||||| |||||||| ||||||| |||||| |||||||||||||| |||||||||||
Sbjct: 48678 aacatcttcaaatggtaattcaatgtaatcgctgactataacaggaacacataaactgac 48619

                                                                         
Query: 470   aagtgcatcaaacaatctgcacgccgagggagtatctccagcaggatgcaggcagaactt 529
             ||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||
Sbjct: 48618 aagcgcatcaaacaatctgcatgccgagggagtatctccagcaggatggaggcagaattt 48559

                                                                         
Query: 530   agatgagtgcattccttgcgtagccatacgccgactcacccttgattgggctccatgttt 589
              ||||||||||||||| | ||||||||||||| |||| ||||||| ||||||||||||||
Sbjct: 48558 ggatgagtgcattcctcgtgtagccatacgcctactctcccttgactgggctccatgttt 48499

                                                                         
Query: 590   tatgattacatctccctcattttcaagaacttgaaaaagtgtatcacggatcttcccgcc 649
             ||||||||||||| |||||||||||||||||||||| || |||||||| | |||||| ||
Sbjct: 48498 tatgattacatctgcctcattttcaagaacttgaaacagcgtatcacgcaccttcccacc 48439

               
Query: 650   ct 651
             ||
Sbjct: 48438 ct 48437



 Score =  165 bits (83), Expect = 3e-37
 Identities = 140/159 (88%)
 Strand = Plus / Minus

                                                                         
Query: 126   gaacagatgcacgagcaatcagtttcattagtgcctctttcaactaggcgtttgttccgg 185
             |||||||||||||||||||| ||| |||| || |||||||||||||||||||| |  |||
Sbjct: 49340 gaacagatgcacgagcaatctgttccattggtacctctttcaactaggcgtttatcgcgg 49281

                                                                         
Query: 186   ttaatcaacagcttgatcagtggtgctttcatggaaacttggcgccatatttgattcact 245
             ||||||||||||||||||| |||||| ||    ||||||||| ||||||| |||||||||
Sbjct: 49280 ttaatcaacagcttgatcaatggtgcctttgaagaaacttggtgccatatctgattcact 49221

                                                    
Query: 246   ggcccattcggatcttcatactcaaagtaatgttttacc 284
             || || || ||||||||||||||||| ||||||||||||
Sbjct: 49220 ggtccgtttggatcttcatactcaaaataatgttttacc 49182



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 649   cctcctttcggtaccggttgcccatgaaaaacagcaatgcaggcc 693
             |||||||||| ||||||||||||||||| || ||||||| |||||
Sbjct: 46681 cctcctttcgataccggttgcccatgaagaatagcaatgaaggcc 46637
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>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1485_B09
          Length = 66599

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                         
Query: 464   actgacaagtgcatcaaacaatctgcacgccgagggagtatctccagcaggatgcaggca 523
             |||||||| ||||||||||| || |||||  || |||||||| ||||||||||| || ||
Sbjct: 24636 actgacaattgcatcaaacagtcggcacgaggaaggagtatccccagcaggatggagaca 24577

                                          
Query: 524   gaacttagatgagtgcattccttgcgtag 552
              ||||| |||||  |||| |||| |||||
Sbjct: 24576 aaactttgatgatcgcatgccttccgtag 24548
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                            
Query: 464      actgacaagtgcatcaaacaatctgcacgccgagggagtatctccagcaggatgcaggca 523
                |||||||| ||||||||||| || |||||  || |||||||| ||||||||||| || ||
Sbjct: 40225684 actgacaattgcatcaaacagtcggcacgaggaaggagtatccccagcaggatggagaca 40225625

                                             
Query: 524      gaacttagatgagtgcattccttgcgtag 552
                 ||||| |||||  |||| |||| |||||
Sbjct: 40225624 aaactttgatgatcgcatgccttccgtag 40225596
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>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1793G04
          Length = 156714

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                         
Query: 464   actgacaagtgcatcaaacaatctgcacgccgagggagtatctccagcaggatgcaggca 523
             |||||||| ||||||||||| || |||||  || |||||||| ||||||||||| || ||
Sbjct: 91462 actgacaattgcatcaaacagtcggcacgaggaaggagtatccccagcaggatggagaca 91403

                                          
Query: 524   gaacttagatgagtgcattccttgcgtag 552
              ||||| |||||  |||| |||| |||||
Sbjct: 91402 aaactttgatgatcgcatgccttccgtag 91374
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>dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1425D05, complete sequence
          Length = 66450

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                         
Query: 464   actgacaagtgcatcaaacaatctgcacgccgagggagtatctccagcaggatgcaggca 523
             |||||||| ||||||||||| || |||||  || |||||||| ||||||||||| || ||
Sbjct: 17034 actgacaattgcatcaaacagtcggcacgaggaaggagtatccccagcaggatggagaca 16975

                                          
Query: 524   gaacttagatgagtgcattccttgcgtag 552
              ||||| |||||  |||| |||| |||||
Sbjct: 16974 aaactttgatgatcgcatgccttccgtag 16946
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>dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1773_H01
          Length = 146543

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                           
Query: 649    cctcctttcggtaccggttgcccatgaaaaacagcaatgcaggcc 693
              |||||||||| ||||||||||||||||| || ||||||| |||||
Sbjct: 145237 cctcctttcgataccggttgcccatgaagaatagcaatgaaggcc 145193
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>dbj|AK119614.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-G05, full
            insert sequence
          Length = 1866

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 464  actgacaagtgcatcaaacaatctgcacgccgagggagtatctccagcaggatgcaggca 523
            |||||||| ||||||||||| || |||||  || |||||||| ||||||||||| || ||
Sbjct: 1079 actgacaattgcatcaaacagtcggcacgaggaaggagtatccccagcaggatggagaca 1020

                                         
Query: 524  gaacttagatgagtgcattccttgcgtag 552
             ||||| |||||  |||| |||| |||||
Sbjct: 1019 aaactttgatgatcgcatgccttccgtag 991
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>dbj|AK106015.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B06, full
            insert sequence
          Length = 1712

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 464  actgacaagtgcatcaaacaatctgcacgccgagggagtatctccagcaggatgcaggca 523
            |||||||| ||||||||||| || |||||  || |||||||| ||||||||||| || ||
Sbjct: 1076 actgacaattgcatcaaacagtcggcacgaggaaggagtatccccagcaggatggagaca 1017

                                         
Query: 524  gaacttagatgagtgcattccttgcgtag 552
             ||||| |||||  |||| |||| |||||
Sbjct: 1016 aaactttgatgatcgcatgccttccgtag 988
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>gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-138b18, complete sequence
          Length = 128810

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                          
Query: 474    gcatcaaacaatctgcacgccgagggagtatctccagcaggatgcaggcagaacttagat 533
              |||||||||||||  || || || |||||||| || |||||||| | ||||||||| |||
Sbjct: 113327 gcatcaaacaatcgacaggctgatggagtatccccggcaggatgtaagcagaactttgat 113386

                         
Query: 534    gagtgcattcc 544
              | |||||||||
Sbjct: 113387 gtgtgcattcc 113397
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>gb|DQ226578.1| Boechera divaricarpa isolate SLW-2-D02 mRNA sequence
          Length = 958

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 405 tctataacatcttcgaatggtaactcaatgtgatcgctaac 445
           ||||||||||||||||| |||||||| |||  |||||||||
Sbjct: 583 tctataacatcttcgaaaggtaactcgatgctatcgctaac 623



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 568 cccttgattgggctccatgttttatgattacatctccctcattttcaagaacttg 622
           |||| ||||| | ||||||||||||  |||||||| | || ||||||||||||||
Sbjct: 746 ccctggattgagttccatgttttattgttacatcttcttccttttcaagaacttg 800
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>ref|NM_179910.2| Arabidopsis thaliana catalytic AT2G35100 mRNA, complete cds
          Length = 1751

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 405  tctataacatcttcgaatggtaactc 430
            ||||||||||||||||| ||||||||
Sbjct: 1099 tctataacatcttcgaaaggtaactc 1074
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>gb|BT015854.1| Arabidopsis thaliana At2g35100 gene, complete cds
          Length = 1344

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 405  tctataacatcttcgaatggtaactc 430
            ||||||||||||||||| ||||||||
Sbjct: 1034 tctataacatcttcgaaaggtaactc 1009
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>gb|BT015054.1| Arabidopsis thaliana At2g35100 gene, complete cds
          Length = 1697

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 405  tctataacatcttcgaatggtaactc 430
            ||||||||||||||||| ||||||||
Sbjct: 1081 tctataacatcttcgaaaggtaactc 1056
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>gb|AC004667.3| Arabidopsis thaliana chromosome 2 clone T4C15 map ve016, complete
             sequence
          Length = 91863

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 405   tctataacatcttcgaatggtaactc 430
             ||||||||||||||||| ||||||||
Sbjct: 75167 tctataacatcttcgaaaggtaactc 75142
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>emb|BX820307.1|CNS0A9HK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH20ZC08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1716

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 405  tctataacatcttcgaatggtaactc 430
            ||||||||||||||||| ||||||||
Sbjct: 1098 tctataacatcttcgaaaggtaactc 1073
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>emb|BX818977.1|CNS0A84Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB33ZC05 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1626

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 405  tctataacatcttcgaatggtaactc 430
            ||||||||||||||||| ||||||||
Sbjct: 1093 tctataacatcttcgaaaggtaactc 1068
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>gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, complete sequence
          Length = 207333

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 143    atcagtttcattagtgcctctt 164
              ||||||||||||||||||||||
Sbjct: 132087 atcagtttcattagtgcctctt 132066
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>ref|NM_123861.2| Arabidopsis thaliana catalytic AT5G44930 transcript variant
            AT5G44930.2 mRNA, complete cds
          Length = 1611

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 117/149 (78%)
 Strand = Plus / Minus

                                                                        
Query: 399  ctgtagtctataacatcttcgaatggtaactcaatgtgatcgctaactataacaggaacg 458
            ||||| ||||| |||||||| || |||| ||||||   |||||| || || || || || 
Sbjct: 1028 ctgtaatctatgacatcttcaaaaggtagctcaatcccatcgcttacaatcaccgggaca 969

                                                                        
Query: 459  cataaactgacaagtgcatcaaacaatctgcacgccgagggagtatctccagcaggatgc 518
            ||||||||  |||  |||||||| |||||||| || || | |||||| |||||  |||| 
Sbjct: 968  cataaactagcaatggcatcaaataatctgcaagcagaagaagtatcaccagctagatgt 909

                                         
Query: 519  aggcagaacttagatgagtgcattccttg 547
            || || |||||||| |  |||||||||||
Sbjct: 908  agacaaaacttagacgtatgcattccttg 880
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>ref|NM_180801.1| Arabidopsis thaliana catalytic AT5G44930 transcript variant
            AT5G44930.1 mRNA, complete cds
          Length = 2183

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 117/149 (78%)
 Strand = Plus / Minus

                                                                        
Query: 399  ctgtagtctataacatcttcgaatggtaactcaatgtgatcgctaactataacaggaacg 458
            ||||| ||||| |||||||| || |||| ||||||   |||||| || || || || || 
Sbjct: 1031 ctgtaatctatgacatcttcaaaaggtagctcaatcccatcgcttacaatcaccgggaca 972

                                                                        
Query: 459  cataaactgacaagtgcatcaaacaatctgcacgccgagggagtatctccagcaggatgc 518
            ||||||||  |||  |||||||| |||||||| || || | |||||| |||||  |||| 
Sbjct: 971  cataaactagcaatggcatcaaataatctgcaagcagaagaagtatcaccagctagatgt 912

                                         
Query: 519  aggcagaacttagatgagtgcattccttg 547
            || || |||||||| |  |||||||||||
Sbjct: 911  agacaaaacttagacgtatgcattccttg 883
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>gb|AC146308.2| Medicago truncatula clone mth2-10a12, complete sequence
          Length = 112733

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 377    gtcaacaaaaattgatatatt 397
              |||||||||||||||||||||
Sbjct: 105456 gtcaacaaaaattgatatatt 105476
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>gb|AC137554.15| Medicago truncatula clone mth2-17j18, complete sequence
          Length = 121248

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 377   gtcaacaaaaattgatatatt 397
             |||||||||||||||||||||
Sbjct: 64626 gtcaacaaaaattgatatatt 64606
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>gb|AC150440.3| Medicago truncatula chromosome 7 BAC clone mth2-189e2, complete
             sequence
          Length = 113968

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 377   gtcaacaaaaattgatatatt 397
             |||||||||||||||||||||
Sbjct: 30909 gtcaacaaaaattgatatatt 30889
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>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 608     attttcaagaacttgaaaaag 628
               |||||||||||||||||||||
Sbjct: 1174523 attttcaagaacttgaaaaag 1174503
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>gb|AY048259.1| Arabidopsis thaliana AT5g44930/K21C13_11 mRNA, complete cds
          Length = 2183

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 117/149 (78%)
 Strand = Plus / Minus

                                                                        
Query: 399  ctgtagtctataacatcttcgaatggtaactcaatgtgatcgctaactataacaggaacg 458
            ||||| ||||| |||||||| || |||| ||||||   |||||| || || || || || 
Sbjct: 1031 ctgtaatctatgacatcttcaaaaggtagctcaatcccatcgcttacaatcaccgggaca 972

                                                                        
Query: 459  cataaactgacaagtgcatcaaacaatctgcacgccgagggagtatctccagcaggatgc 518
            ||||||||  |||  |||||||| |||||||| || || | |||||| |||||  |||| 
Sbjct: 971  cataaactagcaatggcatcaaataatctgcaagcagaagaagtatcaccagctagatgt 912

                                         
Query: 519  aggcagaacttagatgagtgcattccttg 547
            || || |||||||| |  |||||||||||
Sbjct: 911  agacaaaacttagacgtatgcattccttg 883
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 390      gatatattactgtagtctata 410
                |||||||||||||||||||||
Sbjct: 28851028 gatatattactgtagtctata 28851008
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 600      tctccctcattttcaagaact 620
                |||||||||||||||||||||
Sbjct: 12477895 tctccctcattttcaagaact 12477915
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>gb|BT002634.1| Arabidopsis thaliana At5g44930/K21C13_11 gene, complete cds
          Length = 1332

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 117/149 (78%)
 Strand = Plus / Minus

                                                                        
Query: 399  ctgtagtctataacatcttcgaatggtaactcaatgtgatcgctaactataacaggaacg 458
            ||||| ||||| |||||||| || |||| ||||||   |||||| || || || || || 
Sbjct: 1028 ctgtaatctatgacatcttcaaaaggtagctcaatcccatcgcttacaatcaccgggaca 969

                                                                        
Query: 459  cataaactgacaagtgcatcaaacaatctgcacgccgagggagtatctccagcaggatgc 518
            ||||||||  |||  |||||||| |||||||| || || | |||||| |||||  |||| 
Sbjct: 968  cataaactagcaatggcatcaaataatctgcaagcagaagaagtatcaccagctagatgt 909

                                         
Query: 519  aggcagaacttagatgagtgcattccttg 547
            || || |||||||| |  |||||||||||
Sbjct: 908  agacaaaacttagacgtatgcattccttg 880
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>dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0705A04
          Length = 182468

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 600    tctccctcattttcaagaact 620
              |||||||||||||||||||||
Sbjct: 158032 tctccctcattttcaagaact 158052
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>dbj|AB010693.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21C13
          Length = 75709

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 117/149 (78%)
 Strand = Plus / Plus

                                                                         
Query: 399   ctgtagtctataacatcttcgaatggtaactcaatgtgatcgctaactataacaggaacg 458
             ||||| ||||| |||||||| || |||| ||||||   |||||| || || || || || 
Sbjct: 37524 ctgtaatctatgacatcttcaaaaggtagctcaatcccatcgcttacaatcaccgggaca 37583

                                                                         
Query: 459   cataaactgacaagtgcatcaaacaatctgcacgccgagggagtatctccagcaggatgc 518
             ||||||||  |||  |||||||| |||||||| || || | |||||| |||||  |||| 
Sbjct: 37584 cataaactagcaatggcatcaaataatctgcaagcagaagaagtatcaccagctagatgt 37643

                                          
Query: 519   aggcagaacttagatgagtgcattccttg 547
             || || |||||||| |  |||||||||||
Sbjct: 37644 agacaaaacttagacgtatgcattccttg 37672
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>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04,
             complete sequence
          Length = 154865

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 390   gatatattactgtagtctata 410
             |||||||||||||||||||||
Sbjct: 63090 gatatattactgtagtctata 63070
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>emb|AL844593.6| Mouse DNA sequence from clone RP23-227F18 on chromosome 2, complete
             sequence
          Length = 86923

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 261   tcatactcaaagtaatgtttt 281
             |||||||||||||||||||||
Sbjct: 31158 tcatactcaaagtaatgtttt 31178


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,566,679
Number of Sequences: 3902068
Number of extensions: 6566679
Number of successful extensions: 249893
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 249531
Number of HSP's gapped (non-prelim): 363
length of query: 741
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 718
effective length of database: 17,143,297,704
effective search space: 12308887751472
effective search space used: 12308887751472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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