Clone Information

BLAST Search Result

Clone Name	rbasdn20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ZN363_HUMAN (Q96PM5) RING finger and CHY zinc finger domain-cont...	114	4e-25
2	ZN363_MOUSE (Q9CR50) RING finger and CHY zinc finger domain-cont...	113	7e-25
3	YHB0_YEAST (P38748) Hypothetical 67.5 kDa protein in PRPS4-STE20...	44	5e-04
4	TRAIP_MOUSE (Q8VIG6) TRAF-interacting protein	40	0.008
5	TRAIP_HUMAN (Q9BWF2) TRAF-interacting protein	40	0.008
6	TRI32_HUMAN (Q13049) Tripartite motif protein 32 (EC 6.3.2.-) (Z...	38	0.039
7	TRI32_MOUSE (Q8CH72) Tripartite motif protein 32 (EC 6.3.2.-)	38	0.039
8	DTX_DROME (Q23985) Protein deltex	37	0.086
9	YDRD_SCHPO (O13747) Hypothetical RING finger protein C16E8.13 in...	36	0.15
10	VE2_HPV5B (P26545) Regulatory protein E2	35	0.19
11	ATL4G_ARATH (Q8LF65) RING-H2 finger protein ATL4G (RING-H2 finge...	35	0.25
12	SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Sp...	35	0.33
13	ATL1Q_ARATH (Q8LBA0) RING-H2 finger protein ATL1Q	35	0.33
14	ATL3F_ARATH (Q8L9T5) RING-H2 finger protein ATL3F (RING-H2 finge...	34	0.43
15	ATL5P_ARATH (Q9FKX5) RING-H2 finger protein ATL5P	34	0.56
16	RAPSN_TORCA (P09108) 43 kDa receptor-associated protein of the s...	34	0.56
17	ASR1_ASHGO (Q75DC2) Alcohol-sensitive RING finger protein 1	34	0.56
18	TRI42_MOUSE (Q9D2H5) Tripartite motif protein 42	33	0.73
19	PE2R1_CANFA (Q9BGL8) Prostaglandin E2 receptor, EP1 subtype (Pro...	33	0.73
20	MACF1_HUMAN (Q9UPN3) Microtubule-actin crosslinking factor 1, is...	33	0.73
21	RHA2B_ARATH (Q9ZU51) RING-H2 zinc finger protein RHA2b	33	0.73
22	ATL4E_ARATH (Q9SN28) RING-H2 finger protein ATL4E	33	0.73
23	RN141_CHICK (Q5ZM74) RING finger protein 141	33	0.73
24	MACF4_HUMAN (Q96PK2) Microtubule-actin crosslinking factor 1, is...	33	0.73
25	ATL4F_ARATH (Q9SN27) RING-H2 finger protein ATL4F	33	0.73
26	KRAF1_DROME (P11346) Raf homolog serine/threonine-protein kinase...	33	0.95
27	ATL1P_ARATH (Q9XF63) RING-H2 finger protein ATL1P (RING-H2 finge...	33	0.95
28	TRI50_MOUSE (Q810I2) Tripartite motif protein 50	33	0.95
29	ATL4M_ARATH (Q8GT75) RING-H2 finger protein ATL4M (NEP1-interact...	33	1.2
30	ATL2B_ARATH (Q8GT74) RING-H2 finger protein ATL2B (NEP1-interact...	33	1.2
31	ATL1G_ARATH (Q570X5) RING-H2 finger protein ATL1G	33	1.2
32	RHA2A_ARATH (Q9ZT50) RING-H2 zinc finger protein RHA2a	33	1.2
33	YR705_MIMIV (Q5UNW3) Hypothetical protein R705	33	1.2
34	RC3H1_XENLA (Q6NUC6) Roquin (RING finger and C3H zinc finger pro...	33	1.2
35	ADA15_HUMAN (Q13444) ADAM 15 precursor (EC 3.4.24.-) (A disinteg...	33	1.2
36	OR2L2_HUMAN (Q8NH16) Olfactory receptor 2L2 (HTPCRH07)	32	1.6
37	YQOE_CAEEL (Q95QN6) Hypothetical RING finger protein EEED8.16 in...	32	1.6
38	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	32	1.6
39	TRI50_RAT (Q810I1) Tripartite motif protein 50	32	1.6
40	ATL1E_ARATH (Q9C7E9) Putative RING-H2 finger protein ATL1E	32	1.6
41	MACF1_MOUSE (Q9QXZ0) Microtubule-actin crosslinking factor 1 (Ac...	32	1.6
42	GDF6_HUMAN (Q6KF10) Growth/differentiation factor 6 precursor (G...	32	1.6
43	ATL5O_ARATH (Q9LUZ9) Putative RING-H2 finger protein ATL5O	32	2.1
44	K0133_HUMAN (Q14146) Protein KIAA0133	32	2.1
45	ZSWM2_HUMAN (Q8NEG5) Zinc finger SWIM domain-containing protein 2	32	2.8
46	ATL1M_ARATH (P0C035) Putative RING-H2 finger protein ATL1M	32	2.8
47	EL5_ORYSA (Q9LRB7) E3 ubiquitin ligase EL5 (EC 6.3.2.-)	32	2.8
48	YHL1_EBV (P03181) Hypothetical protein BHLF1	32	2.8
49	R126B_XENLA (Q6IRP0) RING finger protein 126-B	32	2.8
50	IF2_BRAJA (Q89WA9) Translation initiation factor IF-2	32	2.8
51	ATL4N_ARATH (Q9SZL4) Putative RING-H2 finger protein ATL4N precu...	32	2.8
52	ATL3E_ARATH (Q9LUL6) Putative RING-H2 finger protein ATL3E	32	2.8
53	RAPSN_HUMAN (Q13702) 43 kDa receptor-associated protein of the s...	32	2.8
54	RN126_XENTR (Q6DIP3) RING finger protein 126	32	2.8
55	TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42	31	3.6
56	ATL2A_ARATH (O22755) RING-H2 finger protein ATL2A (RING-H2 zinc ...	31	3.6
57	PININ_BOVIN (P79122) Pinin	31	3.6
58	CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22	31	3.6
59	BSN_RAT (O88778) Bassoon protein	31	3.6
60	RAPSN_MOUSE (P12672) 43 kDa receptor-associated protein of the s...	31	3.6
61	ZSWM2_MOUSE (Q9D9X6) Zinc finger SWIM domain-containing protein 2	31	3.6
62	RNF13_HUMAN (O43567) RING finger protein 13	31	4.7
63	SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1	31	4.7
64	YKR4_EBV (P30117) Hypothetical protein BKRF4	31	4.7
65	SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1...	31	4.7
66	GPR37_RAT (Q9QYC6) Probable G-protein coupled receptor 37 precur...	31	4.7
67	RNF13_MOUSE (O54965) RING finger protein 13	30	6.2
68	DZIP3_HUMAN (Q86Y13) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-)...	30	6.2
69	K0310_HUMAN (O15027) Protein KIAA0310	30	6.2
70	CWC21_NEUCR (Q7RYH7) Pre-mRNA-splicing factor cwc-21	30	6.2
71	BSN_MOUSE (O88737) Bassoon protein	30	6.2
72	SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory eleme...	30	6.2
73	PRGC1_PIG (Q865B6) Peroxisome proliferator-activated receptor ga...	30	6.2
74	NRG2_HUMAN (O14511) Pro-neuregulin-2, membrane-bound isoform pre...	30	6.2
75	GOLI_DROME (Q06003) Protein goliath precursor (Protein g1)	30	6.2
76	VDR_COTJA (P49701) Vitamin D3 receptor (VDR) (1,25-dihydroxyvita...	30	8.0
77	TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.2...	30	8.0
78	RFPL3_HUMAN (O75679) Ret finger protein-like 3	30	8.0
79	RC3H1_MOUSE (Q4VGL6) Roquin (RING finger and C3H zinc finger pro...	30	8.0
80	ZN364_HUMAN (Q9Y4L5) Zinc finger protein 364 (Rabring 7) (RING f...	30	8.0
81	RL40_SULTO (Q976I5) 50S ribosomal protein L40e	30	8.0
82	LUZP1_HUMAN (Q86V48) Leucine zipper protein 1	30	8.0
83	SON_MOUSE (Q9QX47) SON protein	30	8.0
84	JHD1A_XENTR (Q5U263) JmjC domain-containing histone demethylatio...	30	8.0
85	HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated...	30	8.0
86	ATL5K_ARATH (Q9LSW9) RING-H2 finger protein ATL5K (RING-H2 finge...	30	8.0
87	ZN364_MOUSE (Q9D0C1) Zinc finger protein 364 (Rabring 7)	30	8.0
88	MNAB_MOUSE (P0C090) Membrane-associated nucleic acid binding pro...	30	8.0
89	DZIP3_MOUSE (Q7TPV2) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-)...	30	8.0
90	RN126_MOUSE (Q91YL2) RING finger protein 126	30	8.0
91	MNAB_HUMAN (Q9HBD1) Membrane-associated nucleic acid-binding pro...	30	8.0
92	ATL2E_ARATH (Q9SJJ7) RING-H2 finger protein ATL2E	30	8.0
93	RPS2_ARATH (Q42484) Disease resistance protein RPS2 (Resistance ...	30	8.0
94	RNF38_HUMAN (Q9H0F5) RING finger protein 38	30	8.0
95	RC3H1_HUMAN (Q5TC82) Roquin (RING finger and C3H zinc finger pro...	30	8.0
96	GPR37_MOUSE (Q9QY42) Probable G-protein coupled receptor 37 prec...	30	8.0
97	ATL3G_ARATH (Q67YI6) RING-H2 finger protein ATL3G	30	8.0
98	RNF38_MOUSE (Q8BI21) RING finger protein 38	30	8.0

>ZN363_HUMAN (Q96PM5) RING finger and CHY zinc finger domain-containing protein|
           1 (Zinc finger protein 363) (CH-rich-interacting match
           with PLAG1) (Androgen receptor N-terminal-interacting
           protein)
          Length = 261

 Score =  114 bits (284), Expect = 4e-25
 Identities = 53/112 (47%), Positives = 67/112 (59%)
 Frame = -3

Query: 740 KTAPVCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSACDMTDAWQKLD 561
           +  P+C E +  S +   VL CGH +H  C  EM +   + CP+C  SA DMT  W++LD
Sbjct: 143 QNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEM-LKEGYRCPLCMHSALDMTRYWRQLD 201

Query: 560 QEVAATPMPEFYQKKMVWILCNDCGATSSVRFHVLAQKCPGCSSYNTRETRG 405
            EVA TPMP  YQ   V ILCNDC   S+V+FH+L  KC  C SYNT +  G
Sbjct: 202 DEVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKCKICESYNTAQAGG 253

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>ZN363_MOUSE (Q9CR50) RING finger and CHY zinc finger domain-containing protein|
           1 (Zinc finger protein 363) (CH-rich-interacting match
           with PLAG1) (Androgen receptor N-terminal-interacting
           protein)
          Length = 261

 Score =  113 bits (282), Expect = 7e-25
 Identities = 53/112 (47%), Positives = 67/112 (59%)
 Frame = -3

Query: 740 KTAPVCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSACDMTDAWQKLD 561
           +  P+C E +  S +   VL CGH +H  C  EM +   + CP+C  SA DMT  W++LD
Sbjct: 143 QNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEM-LKEGYRCPLCMHSALDMTRYWRQLD 201

Query: 560 QEVAATPMPEFYQKKMVWILCNDCGATSSVRFHVLAQKCPGCSSYNTRETRG 405
            EVA TPMP  YQ   V ILCNDC   S+V+FH+L  KC  C SYNT +  G
Sbjct: 202 TEVAQTPMPSEYQNVTVDILCNDCNGRSTVQFHILGMKCKLCDSYNTAQAGG 253

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>YHB0_YEAST (P38748) Hypothetical 67.5 kDa protein in PRPS4-STE20 intergenic|
           region
          Length = 585

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 28/109 (25%), Positives = 47/109 (43%)
 Frame = -3

Query: 743 IKTAPVCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSACDMTDAWQKL 564
           + T PVC E +   T  +  + C HT H +CLN+ +   +  CPVC  S+        +L
Sbjct: 237 LPTCPVCLERMDSETTGLVTIPCQHTFHCQCLNKWK---NSRCPVCRHSSL-------RL 286

Query: 563 DQEVAATPMPEFYQKKMVWILCNDCGATSSVRFHVLAQKCPGCSSYNTR 417
            +E       +          C  CG+T ++   ++     GC  YN++
Sbjct: 287 SRESLLKQAGDSAH-------CATCGSTDNLWICLICGNV-GCGRYNSK 327

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>TRAIP_MOUSE (Q8VIG6) TRAF-interacting protein|
          Length = 470

 Score = 40.0 bits (92), Expect = 0.008
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLHCGHTIHLECLNE-MRVHHHFSCPVC 606
           +C ++ FD + D++ +HCGHT HL+CL +        +CP C
Sbjct: 9   ICSDF-FDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQC 49

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>TRAIP_HUMAN (Q9BWF2) TRAF-interacting protein|
          Length = 469

 Score = 40.0 bits (92), Expect = 0.008
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLHCGHTIHLECLNE-MRVHHHFSCPVC 606
           +C ++ FD + D++ +HCGHT HL+CL +        +CP C
Sbjct: 9   ICSDF-FDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQC 49

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>TRI32_HUMAN (Q13049) Tripartite motif protein 32 (EC 6.3.2.-) (Zinc-finger|
           protein HT2A) (72 kDa Tat-interacting protein)
          Length = 653

 Score = 37.7 bits (86), Expect = 0.039
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = -3

Query: 731 PVCYEYLFDSTMDISVLHCGHTIHLECLNEMRVH--HHFSCPVCSR 600
           P+C E   +  +   +LHCGHTI  +CL ++     +   CP CS+
Sbjct: 21  PICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSK 66

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>TRI32_MOUSE (Q8CH72) Tripartite motif protein 32 (EC 6.3.2.-)|
          Length = 655

 Score = 37.7 bits (86), Expect = 0.039
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = -3

Query: 731 PVCYEYLFDSTMDISVLHCGHTIHLECLNEMRVH--HHFSCPVCSR 600
           P+C E   +  +   +LHCGHTI  +CL ++     +   CP CS+
Sbjct: 22  PICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSK 67

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>DTX_DROME (Q23985) Protein deltex|
          Length = 738

 Score = 36.6 bits (83), Expect = 0.086
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 10/52 (19%)
 Frame = -3

Query: 731 PVCYEYLFDSTMD--ISVLHCGHTIHLECL--------NEMRVHHHFSCPVC 606
           P+C E L  S  +  IS+  C H +HL+CL        NEM  +    CPVC
Sbjct: 549 PMCMEELVHSAQNPAISLSRCQHLMHLQCLNGMIIAQQNEMNKNLFIECPVC 600

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>YDRD_SCHPO (O13747) Hypothetical RING finger protein C16E8.13 in chromosome I|
          Length = 547

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 26/94 (27%), Positives = 37/94 (39%)
 Frame = -3

Query: 743 IKTAPVCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSACDMTDAWQKL 564
           + T  VC E +  S   +  + C HT H  CL +     + SCPVC  +        QK+
Sbjct: 205 LPTCVVCLERMDSSITGLITIVCQHTFHCPCLQKW---GNSSCPVCRYT--------QKV 253

Query: 563 DQEVAATPMPEFYQKKMVWILCNDCGATSSVRFH 462
                 +        K +WI C  CG     R+H
Sbjct: 254 QSSEFQSKCTVCCYDKDLWI-CLICGNIGCGRYH 286

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>VE2_HPV5B (P26545) Regulatory protein E2|
          Length = 514

 Score = 35.4 bits (80), Expect = 0.19
 Identities = 35/112 (31%), Positives = 44/112 (39%), Gaps = 10/112 (8%)
 Frame = +2

Query: 428 KSCTRDTFAPGR------GSARSTSPRSRCRGSIPSS----SGRTLAWVWRRPPGRASAT 577
           KS T  T++  R      G  R+ + RSR RG  PS+     GR+     R P   +S T
Sbjct: 283 KSQTHTTWSTTRSRSTSVGKTRALTSRSRSRGRSPSTCRRGGGRSPRRRSRSPSTYSSCT 342

Query: 578 HRSCRRPTASRPGTRSGDEPSSRSGTPNGSCARSAVR*CPWSSQIDTRSRQG 733
            +  +R  A  P TR         G   G   R   R    SS    RSR G
Sbjct: 343 TQRSQRARAESPTTRGARGSRGSRGGSRGGRLRRRGRSSSSSSPAHKRSRGG 394

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>ATL4G_ARATH (Q8LF65) RING-H2 finger protein ATL4G (RING-H2 finger protein|
           ATL17)
          Length = 235

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVC 606
           VC     D+     + +C HT H+ C+ +M  H H SCP+C
Sbjct: 78  VCLSEFKDNESGRVMPNCKHTFHVHCI-DMWFHSHSSCPLC 117

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>SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Splicing factor|
           9G8)
          Length = 238

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 29/81 (35%), Positives = 37/81 (45%)
 Frame = +2

Query: 440 RDTFAPGRGSARSTSPRSRCRGSIPSSSGRTLAWVWRRPPGRASATHRSCRRPTASRPGT 619
           R   A  R S   +  RSR      S SG      + + P R+ +  RS  RP +SR  +
Sbjct: 154 RSRSASPRRSRSISLRRSRSASLRRSRSGSIKGSRYFQSPSRSRSRSRSISRPRSSRSKS 213

Query: 620 RSGDEPSSRSGTPNGSCARSA 682
           RS     SRS  P+GS  RSA
Sbjct: 214 RSPSPKRSRS--PSGSPRRSA 232

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>ATL1Q_ARATH (Q8LBA0) RING-H2 finger protein ATL1Q|
          Length = 223

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSACD 588
           +C + +    +  S+  C HT HL C+++  + H  SCP+C ++  D
Sbjct: 178 ICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHG-SCPICRQAVKD 223

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>ATL3F_ARATH (Q8L9T5) RING-H2 finger protein ATL3F (RING-H2 finger protein ATL2)|
          Length = 304

 Score = 34.3 bits (77), Expect = 0.43
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVC 606
           VC     +S     + +C HT H++C+ +M  H H +CP+C
Sbjct: 121 VCLSEFEESETGRVLPNCQHTFHVDCI-DMWFHSHSTCPLC 160

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>ATL5P_ARATH (Q9FKX5) RING-H2 finger protein ATL5P|
          Length = 221

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 689 SVLHCGHTIHLECLNEMRVHHHFSCPVCSR 600
           S+ HC H  HL C+++  +  H SCP+C R
Sbjct: 191 SLPHCHHMFHLPCIDKW-LRRHASCPLCRR 219

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>RAPSN_TORCA (P09108) 43 kDa receptor-associated protein of the synapse (RAPsyn)|
           (Acetylcholine receptor-associated 43 kDa protein) (43
           kDa postsynaptic protein)
          Length = 411

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSA 594
           +C E + D    +  L C H  HL+CL   + + +  CP C RS+
Sbjct: 364 LCGESIGDQNSQLQALPCSHLFHLKCL---QTNGNRGCPNCKRSS 405

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>ASR1_ASHGO (Q75DC2) Alcohol-sensitive RING finger protein 1|
          Length = 328

 Score = 33.9 bits (76), Expect = 0.56
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = -3

Query: 686 VLHCGHTIHLECLNEMRVHH--HFSCPVCSRSACDMTDAWQKLDQEVAATPMPEFY 525
           ++ CGH  HL C+ +    H  + SCPVC   A  + D   ++  +++   + +FY
Sbjct: 32  LMPCGHEYHLACIRKWFHLHSGNRSCPVCRTEASVLVDTDHEVKIDLSVGQLLDFY 87

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>TRI42_MOUSE (Q9D2H5) Tripartite motif protein 42|
          Length = 723

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
 Frame = -3

Query: 737 TAPVCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFS-------CPVCSRSAC 591
           T P+C      S M    L C H++  +CL +++ H   +       CP+CSRS C
Sbjct: 145 TCPMCNRLRLHSFM----LPCNHSLCEKCLRQLQKHAEVTENFFILICPMCSRSHC 196

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>PE2R1_CANFA (Q9BGL8) Prostaglandin E2 receptor, EP1 subtype (Prostanoid EP1|
           receptor) (PGE receptor, EP1 subtype)
          Length = 403

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 27/70 (38%), Positives = 31/70 (44%)
 Frame = -1

Query: 577 RGRSSTRRSPPHPCQSSTRRRWYGSSATTAGRRRACASTSWRKSVPGAALTTPGRRGAAR 398
           R R S RR  P  C    RR W       A R  + +S+S   SVPG    +PGR  A R
Sbjct: 238 RRRRSRRR--PQACGPDGRRHW----GARAPRSASASSSSSVASVPGG---SPGRGSARR 288

Query: 397 LRWHAPESDG 368
            R H  E  G
Sbjct: 289 ARAHDVEMVG 298

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>MACF1_HUMAN (Q9UPN3) Microtubule-actin crosslinking factor 1, isoforms 1/2/3/5|
            (Actin cross-linking family protein 7) (Macrophin-1)
            (Trabeculin-alpha) (620 kDa actin-binding protein)
            (ABP620)
          Length = 5430

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
 Frame = +2

Query: 425  CKSCTRDTFAPGRGSARSTSPRSRCRGSIPS--SSGRTLAWVWRR---PPGRASATHRSC 589
            C S       P  G+    S  S+ +   P+  SS  +LA        P    + T+R+ 
Sbjct: 5287 CTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSLAGDTSNSSSPASTGAKTNRAD 5346

Query: 590  RRPTASRPGTRSGDEPSSRSGTPNGSCA 673
             + +ASRPG+R+G    SR+ +  GS A
Sbjct: 5347 PKKSASRPGSRAGSRAGSRASSRRGSDA 5374

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>RHA2B_ARATH (Q9ZU51) RING-H2 zinc finger protein RHA2b|
          Length = 147

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = -3

Query: 695 DISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSACDMTDAWQKLDQEVAATPM 537
           ++  L C H  H +CL     H +F+CP+C              D  ++A P+
Sbjct: 86  EVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLLPHHHQGHGSDASISAFPL 138

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>ATL4E_ARATH (Q9SN28) RING-H2 finger protein ATL4E|
          Length = 236

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 677 CGHTIHLECLNEMRVHHHFSCPVCSRS 597
           CGHT H+EC+ ++ +  H +CP+C  S
Sbjct: 130 CGHTFHMECI-DLWLTSHTTCPLCRLS 155

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>RN141_CHICK (Q5ZM74) RING finger protein 141|
          Length = 230

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -3

Query: 707 DSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSACDMTDAW 573
           D  +D+ +L C H+   +C+++    H  SCPVC R      D+W
Sbjct: 160 DGRVDL-ILPCAHSFCQKCIDKWSDRHR-SCPVCRRQVTGAGDSW 202

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>MACF4_HUMAN (Q96PK2) Microtubule-actin crosslinking factor 1, isoform 4|
          Length = 5938

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
 Frame = +2

Query: 425  CKSCTRDTFAPGRGSARSTSPRSRCRGSIPS--SSGRTLAWVWRR---PPGRASATHRSC 589
            C S       P  G+    S  S+ +   P+  SS  +LA        P    + T+R+ 
Sbjct: 5795 CTSMPSSPATPASGTKVIPSSGSKLKRPTPTFHSSRTSLAGDTSNSSSPASTGAKTNRAD 5854

Query: 590  RRPTASRPGTRSGDEPSSRSGTPNGSCA 673
             + +ASRPG+R+G    SR+ +  GS A
Sbjct: 5855 PKKSASRPGSRAGSRAGSRASSRRGSDA 5882

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>ATL4F_ARATH (Q9SN27) RING-H2 finger protein ATL4F|
          Length = 225

 Score = 33.5 bits (75), Expect = 0.73
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -3

Query: 677 CGHTIHLECLNEMRVHHHFSCPVCSRS 597
           CGHT H+EC+ ++ +  H +CP+C  S
Sbjct: 116 CGHTFHMECI-DLWLTSHTTCPLCRLS 141

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>KRAF1_DROME (P11346) Raf homolog serine/threonine-protein kinase dRAF-1 (EC|
           2.7.11.1) (Protein pole-hole)
          Length = 739

 Score = 33.1 bits (74), Expect = 0.95
 Identities = 23/62 (37%), Positives = 31/62 (50%)
 Frame = +2

Query: 455 PGRGSARSTSPRSRCRGSIPSSSGRTLAWVWRRPPGRASATHRSCRRPTASRPGTRSGDE 634
           PGRG+A   +  SR R    SSSG + +    +PP  +S  HR  R P  S+   RS   
Sbjct: 292 PGRGTAVRFNMSSRSRSRRCSSSGSSSS---SKPPSSSSGNHRQGRPPRISQ-DDRSNSA 347

Query: 635 PS 640
           P+
Sbjct: 348 PN 349

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>ATL1P_ARATH (Q9XF63) RING-H2 finger protein ATL1P (RING-H2 finger protein ATL3)|
          Length = 324

 Score = 33.1 bits (74), Expect = 0.95
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 19/76 (25%)
 Frame = -3

Query: 677 CGHTIHLECLNEMRVHHHFSCPVCSRSACDMTDAWQKLDQEV------------------ 552
           C H+ H+EC+ +M    H +CP+C  +      A  K  ++V                  
Sbjct: 146 CNHSFHVECI-DMWFQSHSTCPICRNTVLGPEQASSKRVEQVPDNAENAGTTNNNHDALS 204

Query: 551 -AATPMPEFYQKKMVW 507
             +T  PEF    +VW
Sbjct: 205 QLSTSSPEFPTNVLVW 220

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>TRI50_MOUSE (Q810I2) Tripartite motif protein 50|
          Length = 483

 Score = 33.1 bits (74), Expect = 0.95
 Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 18/108 (16%)
 Frame = -3

Query: 731 PVCYEYLFDSTMDISVLHCGHTIHLECLNEMRVH--HHFSCPVCSRSA-CDMTDAWQKLD 561
           P+C E   +  M    L CGH+   +CL+ +  H      CPVC +S  C  +     L 
Sbjct: 17  PICLEVFKEPLM----LQCGHSYCKDCLDNLSQHLDSELCCPVCRQSVDCSSSPPNVSLA 72

Query: 560 QEVAATPMP---------------EFYQKKMVWILCNDCGATSSVRFH 462
           + + A  +P                 + +K    +C  CG   S + H
Sbjct: 73  RVIDALRLPGDIEPTVCVHHRNPLSLFCEKDQEFICGLCGLLGSHQHH 120

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>ATL4M_ARATH (Q8GT75) RING-H2 finger protein ATL4M (NEP1-interacting protein 1)|
          Length = 236

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 689 SVLHCGHTIHLECLNEMRVHHHFSCPVCSR 600
           S+ HC H  HL C++   +  H SCP+C R
Sbjct: 206 SLPHCHHMFHLPCIDNW-LFRHGSCPMCRR 234

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>ATL2B_ARATH (Q8GT74) RING-H2 finger protein ATL2B (NEP1-interacting protein 2)|
          Length = 241

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 689 SVLHCGHTIHLECLNEMRVHHHFSCPVCSR 600
           S+ HC H  HL C++   + H  SCP+C R
Sbjct: 211 SLPHCHHMFHLPCIDNWLLRHG-SCPMCRR 239

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>ATL1G_ARATH (Q570X5) RING-H2 finger protein ATL1G|
          Length = 261

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
 Frame = -3

Query: 677 CGHTIHLECLNEMRVHHHFSCPVC------SRSACDMTDAWQKL---DQEVAATPMPEFY 525
           C HT H++C+ ++ +  H +CP+C      SRS     D    L   D+EV++ P  E  
Sbjct: 119 CKHTFHMDCI-DLWLTSHTTCPLCRLALIPSRSRQSQDDPVPSLVSPDEEVSSQPESEPV 177

Query: 524 QKKMV 510
             ++V
Sbjct: 178 NHRVV 182

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>RHA2A_ARATH (Q9ZT50) RING-H2 zinc finger protein RHA2a|
          Length = 155

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -3

Query: 695 DISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSACDMTDAWQKLDQEV 552
           ++  L C H  H +CL       +F+CP+C RSA    D   K  + V
Sbjct: 98  EVRKLECRHVFHKKCLEGWLHQFNFTCPLC-RSALVSDDCVSKTQRSV 144

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>YR705_MIMIV (Q5UNW3) Hypothetical protein R705|
          Length = 313

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 33/98 (33%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
 Frame = +2

Query: 467 SARSTSPRS--------RCRGSIPSSSGRTLAWVWRRPPGRASATHRSCRRPTASRPGTR 622
           +ARSTS RS        R  GS  S S  T +    R  G  ++      R  +   G++
Sbjct: 206 NARSTSSRSSGSRSSGSRSSGSRSSGSRSTGSKTSSRSSGSKTSRSSGSSRSRSGSSGSK 265

Query: 623 SGDEPSSRSGTP-NGSCARSAVR*CPWSSQIDTRSRQG 733
           SG   +SRSGT    S +RS  R    SS   + SR G
Sbjct: 266 SGRSRNSRSGTSGRSSNSRSGSR--SGSSSRSSNSRSG 301

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>RC3H1_XENLA (Q6NUC6) Roquin (RING finger and C3H zinc finger protein 1)|
          Length = 1114

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
 Frame = -3

Query: 737 TAPVCYEYLFDSTMDISV-LHCGHTIHLECLNEMRVHHHFSCP---VCSRSACDMTDAWQ 570
           + P+C +  FD T+   + L CGHT+   CLN++   H  +CP       +  ++     
Sbjct: 13  SCPICTQ-TFDETIRKPISLGCGHTVCKMCLNKL---HRKACPFDQTTINTDIELLPVNS 68

Query: 569 KLDQEVAATPMPEFYQKKMVWILCNDCGATSSVRFHVLAQKC 444
            L Q V A  +PE  Q      LC  CGA  +  +   A+KC
Sbjct: 69  ALLQLVGA-QVPEQQQ----ITLCGGCGAEDTKHYEE-ARKC 104

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>ADA15_HUMAN (Q13444) ADAM 15 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 15) (Metalloproteinase-like,
           disintegrin-like, and cysteine-rich protein 15) (MDC-15)
           (Metalloprotease RGD disintegrin protein) (Metargidin)
          Length = 814

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = +1

Query: 361 PPRRQTLEHAT--VAGPPLVSLVL*ELH-PGHFCARTWKRTL 477
           P R  TLE     + GPP++S +  +LH PGH CA +W+ ++
Sbjct: 147 PERSYTLEQGPGDLQGPPIISRIQ-DLHLPGHTCALSWRESV 187

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>OR2L2_HUMAN (Q8NH16) Olfactory receptor 2L2 (HTPCRH07)|
          Length = 312

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLHCGHTIHLECLN--EMRVHHHFSCPVCSRSACDMTDAW 573
           VC   +  S M  S+  C HT++  C+   + R  +HF C V +      TD W
Sbjct: 139 VCVMMITGSWMISSINSCAHTVYALCIPYCKSRAINHFFCDVPAMLTLACTDTW 192

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>YQOE_CAEEL (Q95QN6) Hypothetical RING finger protein EEED8.16 in chromosome II|
          Length = 590

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 26/106 (24%), Positives = 39/106 (36%)
 Frame = -3

Query: 743 IKTAPVCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSACDMTDAWQKL 564
           + T  VC E + DS + I    C H+ H  CL +   +   +CPVC         A Q+ 
Sbjct: 257 LPTCAVCLERMDDSVLAIL---CNHSFHARCLEQWADN---TCPVCRYVQSPEVVAEQR- 309

Query: 563 DQEVAATPMPEFYQKKMVWILCNDCGATSSVRFHVLAQKCPGCSSY 426
                                CNDCG ++ +   ++     GC  Y
Sbjct: 310 ---------------------CNDCGMSNDLWICLICGNI-GCGRY 333

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 24/73 (32%), Positives = 34/73 (46%)
 Frame = +2

Query: 440 RDTFAPGRGSARSTSPRSRCRGSIPSSSGRTLAWVWRRPPGRASATHRSCRRPTASRPGT 619
           R + +PGR   RS++  S    S  SS  R+     ++PP R S+  R  RR + S    
Sbjct: 337 RRSRSPGRRRRRSSASLSGSSSSSSSSRSRSPP---KKPPKRTSSPPRKTRRLSPSASPP 393

Query: 620 RSGDEPSSRSGTP 658
           R    PSS +  P
Sbjct: 394 RRRHRPSSPATPP 406

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>TRI50_RAT (Q810I1) Tripartite motif protein 50|
          Length = 483

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 18/108 (16%)
 Frame = -3

Query: 731 PVCYEYLFDSTMDISVLHCGHTIHLECLNEMRVH--HHFSCPVCSRSA-CDMTDAWQKLD 561
           P+C E   +  M    L CGH+    CL+ +  H      CPVC +S  C  +     L 
Sbjct: 17  PICLEVFKEPLM----LQCGHSYCKNCLDSLSEHLDSELRCPVCRQSVDCSSSPPNVSLA 72

Query: 560 QEVAATPMP---------------EFYQKKMVWILCNDCGATSSVRFH 462
           + + A  +P                 + +K    +C  CG   S + H
Sbjct: 73  RVIDALRLPGDTEPTVCVHHRNPLSLFCEKDQEFICGLCGLLGSHQHH 120

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>ATL1E_ARATH (Q9C7E9) Putative RING-H2 finger protein ATL1E|
          Length = 336

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -3

Query: 731 PVCY-EYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRS 597
           P+C  EY    T+   +  C H  H++C++E  +  H SCPVC  S
Sbjct: 291 PICLSEYASKETVRC-MPECDHCFHVQCIDEW-LKIHSSCPVCRNS 334

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>MACF1_MOUSE (Q9QXZ0) Microtubule-actin crosslinking factor 1 (Actin cross-linking|
            family 7)
          Length = 5327

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
 Frame = +2

Query: 425  CKSCTRDTFAPGRGSARSTSPRSRCRGSIPS--SSGRTLAWVWRR---PPGRASATHRSC 589
            C S       P  G+   +S  S+ +   P+  SS  +LA        P    +  +R+ 
Sbjct: 5184 CTSMPSSPATPASGTKVISSSGSKLKRPTPAFHSSRTSLAGDTSNSSSPASTGAKANRAD 5243

Query: 590  RRPTASRPGTRSGDEPSSRSGTPNGSCA 673
             + +ASRPG+R+G    SR+ +  GS A
Sbjct: 5244 PKKSASRPGSRAGSRAGSRASSRRGSDA 5271

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>GDF6_HUMAN (Q6KF10) Growth/differentiation factor 6 precursor (GDF-6)|
           (Growth/differentiation factor 16)
          Length = 455

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 27/76 (35%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
 Frame = +2

Query: 428 KSCTRDTFAPGR---GSARSTSPRSRCRGSIPSSSGRTLAWVWRRPPGRASATHRSCRRP 598
           +S  ++ FA  R   GSA +  P +   GS P  SG   A  W   PGR     R  R  
Sbjct: 283 RSQRKNLFAEMREQLGSAEAAGPGAGAEGSWPPPSGAPDARPWLPSPGR-----RRRRTA 337

Query: 599 TASRPGTRSGDEPSSR 646
            ASR G R G +   R
Sbjct: 338 FASRHGKRHGKKSRLR 353

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>ATL5O_ARATH (Q9LUZ9) Putative RING-H2 finger protein ATL5O|
          Length = 308

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -3

Query: 680 HCGHTIHLECLNEMRVHHHFSCPVC 606
           +CGH  H+EC+ +M +  H +CP+C
Sbjct: 156 NCGHGFHVECI-DMWLSSHSTCPLC 179

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>K0133_HUMAN (Q14146) Protein KIAA0133|
          Length = 1524

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +3

Query: 411  RLPGVVRAAPGTLLRQDVEAHARRRPAVVAEDPYHLLL--VELWHGCGGDLLVELLPRIG 584
            RLP V+ ++  TLL  D+  H R   A +++     LL  V L+ G    +L+EL    G
Sbjct: 1111 RLPSVLISSVSTLLEADLGQHCRDGGADISQGSDRTLLSHVALYQGVYSQILLELPALAG 1170

Query: 585  H 587
            H
Sbjct: 1171 H 1171

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>ZSWM2_HUMAN (Q8NEG5) Zinc finger SWIM domain-containing protein 2|
          Length = 633

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 11/113 (9%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLH--CGHTIHLECLNEMRVHHHFS------CPVCSRSACDM---T 582
           +C E L +  + ++     CG++IH++C+  +  +   S      CP+C +    +    
Sbjct: 149 ICQELLLEKKLPVTFCRFGCGNSIHIKCMKILANYQSTSNTSMLKCPLCRKEFAPLKLIL 208

Query: 581 DAWQKLDQEVAATPMPEFYQKKMVWILCNDCGATSSVRFHVLAQKCPGCSSYN 423
           + ++   + VAA         K + I CN+C             KC  C  Y+
Sbjct: 209 EEFKNSSKLVAAAEKERL--DKHLGIPCNNC---KQFPIEGKCYKCTECIEYH 256

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>ATL1M_ARATH (P0C035) Putative RING-H2 finger protein ATL1M|
          Length = 310

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSACDMTD 579
           VC   L D      +  C H  H++C+ +M    H +CP+C  +   + D
Sbjct: 122 VCLSDLVDGDKARVLPRCNHGFHVDCI-DMWFQSHSTCPLCRNTVGSVED 170

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>EL5_ORYSA (Q9LRB7) E3 ubiquitin ligase EL5 (EC 6.3.2.-)|
          Length = 325

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVC 606
           VC   L D      +  CGH  H EC+ +M +  H +CP+C
Sbjct: 136 VCLAELEDGEEARFLPRCGHGFHAECV-DMWLGSHSTCPLC 175

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>YHL1_EBV (P03181) Hypothetical protein BHLF1|
          Length = 660

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = +2

Query: 494 RC-RGSIPSSSGRTLAWVWRRPPG-RASATHRSCRRPTASRPGTRSGDEPSSRSGTPNG 664
           RC  G  P+ SG       RRPPG   SA +  C R    R G + G  P      P+G
Sbjct: 497 RCPAGPPPTRSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSG 555



 Score = 31.6 bits (70), Expect = 2.8
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = +2

Query: 494 RC-RGSIPSSSGRTLAWVWRRPPG-RASATHRSCRRPTASRPGTRSGDEPSSRSGTPNG 664
           RC  G  P+ SG       RRPPG   SA +  C R    R G + G  P      P+G
Sbjct: 372 RCPAGPPPTRSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSG 430



 Score = 31.6 bits (70), Expect = 2.8
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = +2

Query: 494 RC-RGSIPSSSGRTLAWVWRRPPG-RASATHRSCRRPTASRPGTRSGDEPSSRSGTPNG 664
           RC  G  P+ SG       RRPPG   SA +  C R    R G + G  P      P+G
Sbjct: 247 RCPAGPPPTRSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSG 305

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>R126B_XENLA (Q6IRP0) RING finger protein 126-B|
          Length = 312

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 731 PVCYEYLFDSTMDISV--LHCGHTIHLECLNEMRVHHHFSCPVCSRS 597
           PVC E   D T+  SV  L C H  H +C+    +  H +CPVC +S
Sbjct: 229 PVCKE---DYTVGESVRQLPCNHLFHNDCIIPW-LEQHDTCPVCRKS 271

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>IF2_BRAJA (Q89WA9) Translation initiation factor IF-2|
          Length = 902

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 29/85 (34%), Positives = 34/85 (40%)
 Frame = +3

Query: 417 PGVVRAAPGTLLRQDVEAHARRRPAVVAEDPYHLLLVELWHGCGGDLLVELLPRIGHVAG 596
           PG   A P T   Q   A A R PAV AE        ++  G GG       P+  H  G
Sbjct: 210 PGTTTARPATTTAQRPGAPAGRGPAVAAEPDEDEAPRQIRRGPGGAARPAPPPKTTHKPG 269

Query: 597 RPRADRAREVVMNPHLVQALQMDRV 671
            P+ +R R  V     V AL  D V
Sbjct: 270 -PQKERGRLTV-----VTALNADEV 288

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>ATL4N_ARATH (Q9SZL4) Putative RING-H2 finger protein ATL4N precursor|
          Length = 145

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -3

Query: 731 PVCYEYLFDSTMDISVLH---CGHTIHLECLNEMRVHHHFSCPVC 606
           P+C   L +   + +V H   C H  H+ C+    +  H +CP+C
Sbjct: 63  PIC---LVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLC 104

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>ATL3E_ARATH (Q9LUL6) Putative RING-H2 finger protein ATL3E|
          Length = 204

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSAC 591
           VC   L D      +  C H  H+EC++   +  + +CP+C +  C
Sbjct: 90  VCLSELADGDKARVLPSCDHWFHVECIDSW-LQSNSTCPICRKRVC 134

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>RAPSN_HUMAN (Q13702) 43 kDa receptor-associated protein of the synapse (RAPsyn)|
           (Acetylcholine receptor-associated 43 kDa protein) (43
           kDa postsynaptic protein)
          Length = 411

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSA 594
           +C E + +    +  L C H  HL CL         SCP C RS+
Sbjct: 364 LCGESIGEKNSRLQALPCSHIFHLRCLQNNGTR---SCPNCRRSS 405

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>RN126_XENTR (Q6DIP3) RING finger protein 126|
          Length = 311

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -3

Query: 731 PVCYEYLFDSTMDISV--LHCGHTIHLECLNEMRVHHHFSCPVCSRS 597
           PVC E   D T+  SV  L C H  H +C+    +  H +CPVC +S
Sbjct: 228 PVCKE---DYTVGESVRQLPCNHLFHNDCIIPW-LEQHDTCPVCRKS 270

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>TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42|
          Length = 723

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
 Frame = -3

Query: 731 PVCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFS-------CPVCSRSAC 591
           P+C      S M    L C H++  +CL +++ H   +       CPVC RS C
Sbjct: 147 PMCSRLRLHSFM----LPCNHSLCEKCLRQLQKHAEVTENFFILICPVCDRSHC 196

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>ATL2A_ARATH (O22755) RING-H2 finger protein ATL2A (RING-H2 zinc finger protein|
           RHA3a)
          Length = 185

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 677 CGHTIHLECLNEMRVHHHFSCPVCSR 600
           CGH+ H+EC+++  V    SCP C R
Sbjct: 121 CGHSFHVECIDKWLVSRS-SCPSCRR 145

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>PININ_BOVIN (P79122) Pinin|
          Length = 703

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 24/77 (31%), Positives = 34/77 (44%)
 Frame = +2

Query: 458 GRGSARSTSPRSRCRGSIPSSSGRTLAWVWRRPPGRASATHRSCRRPTASRPGTRSGDEP 637
           GR   R++  RSR   S  SSS  T +       G +S++  S  R ++S   T      
Sbjct: 577 GRARNRTSKSRSRSSSSSSSSSSSTSS-----SSGSSSSSGSSSSRTSSSSSSTSGSSSR 631

Query: 638 SSRSGTPNGSCARSAVR 688
            S S T + S +RS  R
Sbjct: 632 DSSSSTTSSSESRSRSR 648

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>CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22|
          Length = 881

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
 Frame = +2

Query: 446 TFAPGRGSARSTSPRSRCRGSIPSSS----GRTLAWVWRRPPGRASATHRSCRRPTASRP 613
           ++ P    +RS  P+SR R    S S    GR  + V R PP R        R P+ S  
Sbjct: 697 SYTPSYSRSRSPVPKSRRRSVSYSRSRSPAGRRRSSVSRTPPRRVRGKSYDSRSPSRSVT 756

Query: 614 GTRSGDEPSSRSGTPNGSCARSAVR*CPWSSQIDTRSR 727
             R     S R  + + S +RS     P    +D R+R
Sbjct: 757 PPRRRTSYSRRDRSYSRSLSRSVT---PPLRAVDARAR 791



 Score = 30.0 bits (66), Expect = 8.0
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +2

Query: 470 ARSTSPRSRCRGSIPSSSGRTLAWVWRRPPGRASATHRSCRRPTASRPGTRSGDEPS-SR 646
           + S S  S C     SS  R+ ++ + R P R+    RS  R    R  +RS    S  R
Sbjct: 640 SESVSSHSTCSTCTGSSRSRSRSYSYSRSPSRSRGRRRSISR---GRSYSRSVSGSSRGR 696

Query: 647 SGTPNGSCARSAV 685
           S TP+ S +RS V
Sbjct: 697 SYTPSYSRSRSPV 709

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>BSN_RAT (O88778) Bassoon protein|
          Length = 3937

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -1

Query: 583  PMRGRSSTRRSPPHPCQSSTRRRWYGSSATTAGRRRACASTSWRKSVPGAALTTPGR 413
            P +GR+   +S P P  + T  R  G+    AG+  A   + + K +PG A    G+
Sbjct: 3865 PQQGRAPQAQSAPGPAGAKTGARPGGTPGAPAGQPAAEGESVFSKILPGGAAEQAGK 3921

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>RAPSN_MOUSE (P12672) 43 kDa receptor-associated protein of the synapse (RAPsyn)|
           (Acetylcholine receptor-associated 43 kDa protein) (43
           kDa postsynaptic protein)
          Length = 411

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSA 594
           +C E + +    +  L C H  HL CL         SCP C RS+
Sbjct: 364 LCGESIGERNSRLQALPCSHIFHLRCLQNNGTR---SCPNCRRSS 405

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>ZSWM2_MOUSE (Q9D9X6) Zinc finger SWIM domain-containing protein 2|
          Length = 631

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 21/113 (18%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
 Frame = -3

Query: 731 PVCYEYLFDSTMDISVLH--CGHTIHLECLNEMRVHHH-------FSCPVCSRSACDMTD 579
           P+C E L +  + ++     CG+ +H++C+  +  +           CP+C      +  
Sbjct: 148 PICQEVLLEKKLPVTFCRFGCGNNVHIKCMRILANYQDTGSDSSVLRCPLCREEFAPLKV 207

Query: 578 AWQKLDQEVAATPMPEFYQ-KKMVWILCNDCGATSSVRFHVLAQKCPGCSSYN 423
             ++         + E  +  K + I CN+C   + +       KC  C  Y+
Sbjct: 208 ILEEFKNSNKLITISEKERLDKHLGIPCNNC---NQLPIEGRCYKCTECVEYH 257

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>RNF13_HUMAN (O43567) RING finger protein 13|
          Length = 381

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
 Frame = -3

Query: 692 ISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSACDM-------TDAWQKLDQEVAATPMP 534
           + +L C H  H +C++        +CPVC +            TD+ Q+ ++    TP+ 
Sbjct: 253 LRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPL- 311

Query: 533 EFYQKKMVWILCNDCGATSSVRFH 462
               + +  +     GA S  R H
Sbjct: 312 ---LRPLASVSAQSFGALSESRSH 332

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>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -2

Query: 489 RGDVERALPRPGAKVSRVQLLQHQGDEGRPGYGGMLQSLTARRRRQYNRHYSLSHS 322
           +G  +R  P P  K  +V+L + + D+G    G M  + + ++RRQY R    S S
Sbjct: 443 KGTEKRESPSPAPKPRKVELSESEEDKG----GKMAAADSVQQRRQYRRQNQQSSS 494

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>YKR4_EBV (P30117) Hypothetical protein BKRF4|
          Length = 217

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = -1

Query: 619 RARSARGRPAT*PMRGRSSTRRSPPHPCQSSTR 521
           R R+    PA  P+RGR+S    PP P Q ST+
Sbjct: 134 RTRAPPRPPAPAPVRGRASAPPRPPAPVQQSTK 166

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>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -2

Query: 489 RGDVERALPRPGAKVSRVQLLQHQGDEGRPGYGGMLQSLTARRRRQYNRHYSLSHS 322
           +G  +R  P P  K  +V+L + + D+G    G M  + + ++RRQY R    S S
Sbjct: 443 KGTEKRESPSPAPKPRKVELSESEEDKG----GKMAAADSVQQRRQYRRQNQQSSS 494

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>GPR37_RAT (Q9QYC6) Probable G-protein coupled receptor 37 precursor|
           (G-protein coupled receptor CNS1)
          Length = 603

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
 Frame = +2

Query: 455 PGRGSARSTSPRSRCRGSIPSSSGRTLAWVWRRPPGRASATHRSCRRPTAS---RPGTRS 625
           P RG        +   G +   +    AW W+   G+  + H   R PT S   R  +  
Sbjct: 89  PPRGGDTGVIEEAAASGPLGPPTKPPGAWRWKGAQGKEPSGHLGRREPTDSQLFRQTSER 148

Query: 626 GDEPSSRSGTPNGS 667
           G+  S R   P GS
Sbjct: 149 GEMSSKRDEIPQGS 162

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>RNF13_MOUSE (O54965) RING finger protein 13|
          Length = 381

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSACDM-------TDAWQ 570
           +C E   D    + +L C H  H +C++        +CPVC +            TD+ Q
Sbjct: 242 ICLEEYEDGDK-LRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQ 300

Query: 569 KLDQEVAATPM 537
           + +Q    TP+
Sbjct: 301 EENQVSEHTPL 311

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>DZIP3_HUMAN (Q86Y13) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-) (DAZ-interacting|
            protein 3) (RNA-binding ubiquitin ligase of 138 kDa)
            (hRUL138)
          Length = 1208

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 728  VCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVC 606
            +C+E L  S  ++SVL C H  H +C+    +    +CP C
Sbjct: 1150 ICHENL--SPENLSVLPCAHKFHAQCIRPWLMQQG-TCPTC 1187

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>K0310_HUMAN (O15027) Protein KIAA0310|
          Length = 2179

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +2

Query: 545  WRRPPGRASATHRSCRRPTASRPGTR---SGDEPSSRSGTPNGSCARSAVR*CPWSSQID 715
            +R   G ASA  ++ R P   RP +R   S + P  R G P G  +  +     WSSQ D
Sbjct: 1021 YRPYDGAASAYAQNYRYPEPERPSSRASHSSERPPPRQGYPEGYYSSKS----GWSSQSD 1076

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>CWC21_NEUCR (Q7RYH7) Pre-mRNA-splicing factor cwc-21|
          Length = 344

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 28/80 (35%), Positives = 29/80 (36%), Gaps = 4/80 (5%)
 Frame = +2

Query: 461 RGSARSTSPRSRCRGSIPSSSGRTLAWVWRRPP---GRASATHRSCR-RPTASRPGTRSG 628
           RG  R    R R  G + S   R     W RPP   GR     R  R R   S  G    
Sbjct: 194 RGRGRGFGRRDRDEGRLNSRERRAPPRDWDRPPTPRGRGGRGGRGGRDREVDSYRGAAGR 253

Query: 629 DEPSSRSGTPNGSCARSAVR 688
           D   SRS     S  RS VR
Sbjct: 254 DRSRSRSPIRERSRTRSPVR 273

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>BSN_MOUSE (O88737) Bassoon protein|
          Length = 3941

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 21/76 (27%), Positives = 35/76 (46%)
 Frame = +2

Query: 446  TFAPGRGSARSTSPRSRCRGSIPSSSGRTLAWVWRRPPGRASATHRSCRRPTASRPGTRS 625
            TF+ G GS  +T+  +R   +  S +G        R P  +S  H   + PT +  G+++
Sbjct: 1383 TFSQGPGSPATTASPTRGYMTPTSPAGS------ERSPSTSSTIHSYGQPPTTANYGSQT 1436

Query: 626  GDEPSSRSGTPNGSCA 673
             + P + SG P    A
Sbjct: 1437 EELPHAPSGPPGSGRA 1452

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>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding|
            protein) (NRE-binding protein) (DBP-5) (Bax antagonist
            selected in saccharomyces 1) (BASS1)
          Length = 2426

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
 Frame = -1

Query: 628  TTSRARSARGRPAT*PM---RGRSST-----RRSPPHPCQSSTRRRWYGSSATTAGRRRA 473
            T SR+RS R R ++      RGR S      +RSP H  +S  R+R   SS       RA
Sbjct: 1861 TRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRA 1920

Query: 472  CASTSWRKSVPGAALTTPGRRGAAR 398
             + T  R+S       TP RR  +R
Sbjct: 1921 RSRTPSRRS----RSHTPSRRRRSR 1941

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>PRGC1_PIG (Q865B6) Peroxisome proliferator-activated receptor gamma|
           coactivator 1-alpha (PPAR gamma coactivator 1-alpha)
           (PPARGC-1-alpha) (PGC-1-alpha)
          Length = 796

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
 Frame = +2

Query: 467 SARSTSPRSRCRGSI-PSSSGRTLAWVWRRPPGRASATHRSCRRPTASRPGTRS-GDEPS 640
           S   +S  S CR S+ P  S  +      R   R+ + HRSC R   SR  +RS G   S
Sbjct: 535 SPSCSSFNSPCRDSVSPPKSLFSQRPQRMRSRSRSFSQHRSCSRSPYSRSRSRSPGSRSS 594

Query: 641 SRS--GTPNGSCARSAVR*CPWSSQIDTRS 724
           SRS   + +G C     R  P  ++  +RS
Sbjct: 595 SRSCYYSESGHCRHRTHRNSPLCARSRSRS 624

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>NRG2_HUMAN (O14511) Pro-neuregulin-2, membrane-bound isoform precursor|
           (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and
           thymus-derived activator for ERBB kinases) (NTAK)
           (Divergent of neuregulin-1) (DON-1)]
          Length = 850

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 26/86 (30%), Positives = 36/86 (41%)
 Frame = +2

Query: 422 CCKSCTRDTFAPGRGSARSTSPRSRCRGSIPSSSGRTLAWVWRRPPGRASATHRSCRRPT 601
           CC +        GR S+ S S  S    S  SSS  + +        R+S+ + S  RP 
Sbjct: 5   CCSALPPPPLEKGRCSSYSDSSSSSSERSSSSSSSSSES----GSSSRSSSNNSSISRP- 59

Query: 602 ASRPGTRSGDEPSSRSGTPNGSCARS 679
           A+ P  R   +P  RS     + ARS
Sbjct: 60  AAPPEPRPQQQPQPRSPAARRAAARS 85

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>GOLI_DROME (Q06003) Protein goliath precursor (Protein g1)|
          Length = 461

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVC 606
           +C E  +  T  I +L C H  H  C++   + H  +CP+C
Sbjct: 305 ICIE-AYKPTDTIRILPCKHEFHKNCIDPWLIEHR-TCPMC 343

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>VDR_COTJA (P49701) Vitamin D3 receptor (VDR) (1,25-dihydroxyvitamin D3|
           receptor)
          Length = 448

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 19/62 (30%), Positives = 26/62 (41%)
 Frame = -3

Query: 593 CDMTDAWQKLDQEVAATPMPEFYQKKMVWILCNDCGATSSVRFHVLAQKCPGCSSYNTRE 414
           C  +   Q  D E  A   PEF   + V  +C  CG  ++  FH  A  C GC  +  R 
Sbjct: 15  CCESQELQSSDMETPAVGTPEF--DRNVPRICGVCGDRAT-GFHFNAMTCEGCKGFFRRS 71

Query: 413 TR 408
            +
Sbjct: 72  MK 73

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>TMPSD_HUMAN (Q9BYE2) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 581

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +2

Query: 455 PGRGSARSTSP-RSRCRGSIPSSSGRTLAWVWRRPPGRASATHRSCRRPTASRPGTRSGD 631
           PGR S    SP ++   G+ P  +    A     PPGRAS    S   P  + P   S  
Sbjct: 31  PGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGRASPGRAS---PAQASPARASPA 87

Query: 632 EPS-SRSGTPNGSCARSA 682
             S SRS +   S ARSA
Sbjct: 88  LASLSRSSSGRSSSARSA 105

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>RFPL3_HUMAN (O75679) Ret finger protein-like 3|
          Length = 317

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -3

Query: 737 TAPVCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSACDMTDAWQKL 564
           + PVC +YL +  M    L CG T+ L+C+N ++   H    +C    C M     K+
Sbjct: 39  SCPVCSDYL-EKPMS---LECGCTVCLKCINSLQKEPHGEDLLC--CCCSMVSQRNKI 90

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>RC3H1_MOUSE (Q4VGL6) Roquin (RING finger and C3H zinc finger protein 1)|
           (Sanroque protein)
          Length = 1130

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -3

Query: 737 TAPVCYEYLFDSTMDISV-LHCGHTIHLECLNEMRVHHHFSCP 612
           + P+C +  FD T+   + L CGHT+   CLN++   H  +CP
Sbjct: 13  SCPICTQ-TFDETIRKPISLGCGHTVCKMCLNKL---HRKACP 51

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>ZN364_HUMAN (Q9Y4L5) Zinc finger protein 364 (Rabring 7) (RING finger protein|
           115)
          Length = 304

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
 Frame = -3

Query: 731 PVCYEYLFDSTMDISV--LHCGHTIHLECLNEMRVHHHFSCPVCSRSACDMTDAWQKLDQ 558
           PVC E   D T++  V  L C H  H  C+    +  H +CPVC +S        Q    
Sbjct: 229 PVCKE---DYTVEEEVRQLPCNHFFHSSCIVPW-LELHDTCPVCRKSLNGEDSTRQSQST 284

Query: 557 EVAAT 543
           E +A+
Sbjct: 285 EASAS 289

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>RL40_SULTO (Q976I5) 50S ribosomal protein L40e|
          Length = 56

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = -3

Query: 503 LCNDCGATSSVRFHVLAQKCPGCSSYNTR 417
           +C DCGA +SVR    A KC  C S N R
Sbjct: 21  VCRDCGALNSVR----ATKCRRCHSKNLR 45

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>LUZP1_HUMAN (Q86V48) Leucine zipper protein 1|
          Length = 1076

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
 Frame = +2

Query: 437 TRDTFAPGRGSARSTSPRSRCRGSI-----PSSSGRTLAWVWRRPPGRASATHRSCRRPT 601
           T D F PG  S++S   +SR + S+     P++   + AW     PG  S       + T
Sbjct: 451 TEDRFVPG--SSQSEGKKSREQPSVLSRYPPAAQEHSKAWKGTSKPGTESGLKGKVEKTT 508

Query: 602 ASRPGTRSGDEPSSRSG 652
            +   T  G  PS   G
Sbjct: 509 RTFSDTTHGSVPSDPLG 525

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>SON_MOUSE (Q9QX47) SON protein|
          Length = 2404

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
 Frame = -1

Query: 628  TTSRARSARGRPAT*PM---RGRSST-----RRSPPHPCQSSTRRRWYGSSATTAGRRRA 473
            T SR+RS R R ++      RGR S      +RSP H  +S  R+R   SS       RA
Sbjct: 1846 TRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARA 1905

Query: 472  CASTSWRKSVPGAALTTPGRR 410
             + T  R+S       TP RR
Sbjct: 1906 RSRTPSRRS----RSHTPSRR 1922

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>JHD1A_XENTR (Q5U263) JmjC domain-containing histone demethylation protein 1A|
           (EC 1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and
           leucine-rich repeat protein 11)
          Length = 1146

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 593 RPTASRPGTRSGDEPSSRSGTPNGSCARSAVR 688
           +P   RP +R    P   SGTP+G+ A S  R
Sbjct: 555 KPHTMRPASRHSTAPPRTSGTPSGTTASSGAR 586

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>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2 (Brain cyclic nucleotide
           gated channel 2) (BCNG-2)
          Length = 889

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 20/64 (31%), Positives = 26/64 (40%)
 Frame = +2

Query: 554 PPGRASATHRSCRRPTASRPGTRSGDEPSSRSGTPNGSCARSAVR*CPWSSQIDTRSRQG 733
           P GR  +   SC RP    PG  S     +  G+PNG C R   +  P   +   R  + 
Sbjct: 71  PRGRLRSRDSSCGRP--GTPGAAS-----TAKGSPNGECGRGEPQCSPAGPEGPARGPKV 123

Query: 734 QF*C 745
            F C
Sbjct: 124 SFSC 127

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>ATL5K_ARATH (Q9LSW9) RING-H2 finger protein ATL5K (RING-H2 finger protein|
           ATL16)
          Length = 375

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -3

Query: 728 VCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVC-SRSACD 588
           VC     D      + +C H  H++C+ ++ + ++ +CP+C +R +CD
Sbjct: 140 VCLSEFQDEEKLRIIPNCSHLFHIDCI-DVWLQNNANCPLCRTRVSCD 186

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>ZN364_MOUSE (Q9D0C1) Zinc finger protein 364 (Rabring 7)|
          Length = 305

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
 Frame = -3

Query: 731 PVCYEYLFDSTMDISV--LHCGHTIHLECLNEMRVHHHFSCPVCSRSACDMTDAWQKLDQ 558
           PVC E   D T++  V  L C H  H  C+    +  H +CPVC +S        Q    
Sbjct: 230 PVCKE---DYTVEEKVRQLPCNHFFHSSCIVPW-LELHDTCPVCRKSLNGEDSTRQTQSS 285

Query: 557 EVAAT 543
           E +A+
Sbjct: 286 EASAS 290

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>MNAB_MOUSE (P0C090) Membrane-associated nucleic acid binding protein|
          Length = 1187

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -3

Query: 737 TAPVCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCP 612
           + P+CY    ++      L C HT+   CLN++   H  +CP
Sbjct: 13  SCPICYNEFDENVHKPISLGCSHTVCKTCLNKL---HRKACP 51

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>DZIP3_MOUSE (Q7TPV2) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-) (DAZ-interacting|
            protein 3 homolog)
          Length = 1204

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 728  VCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVC 606
            +C+E L  S  ++SVL C H  H +C+    +    +CP C
Sbjct: 1146 ICHENL--SPENLSVLPCAHKFHSQCIRPWLMQQG-TCPTC 1183

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>RN126_MOUSE (Q91YL2) RING finger protein 126|
          Length = 313

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -3

Query: 731 PVCYEYLFDSTMDISV--LHCGHTIHLECLNEMRVHHHFSCPVCSRS 597
           PVC E   D  +  SV  L C H  H  C+    +  H SCPVC +S
Sbjct: 232 PVCKE---DYALGESVRQLPCNHLFHDSCIVPW-LEQHDSCPVCRKS 274

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>MNAB_HUMAN (Q9HBD1) Membrane-associated nucleic acid-binding protein (RING|
           finger protein 164)
          Length = 1191

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -3

Query: 737 TAPVCYEYLFDSTMDISVLHCGHTIHLECLNEMRVHHHFSCP 612
           + P+CY    ++      L C HT+   CLN++   H  +CP
Sbjct: 13  SCPICYNEFDENVHKPISLGCSHTVCKTCLNKL---HRKACP 51

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>ATL2E_ARATH (Q9SJJ7) RING-H2 finger protein ATL2E|
          Length = 237

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -3

Query: 680 HCGHTIHLECLNEMRVHHHFSCPVC 606
           HCGH  H++C++   +  + +CP+C
Sbjct: 158 HCGHVFHVDCVDTW-LSSYVTCPLC 181

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>RPS2_ARATH (Q42484) Disease resistance protein RPS2 (Resistance to Pseudomonas|
           syringae protein 2)
          Length = 909

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
 Frame = -3

Query: 587 MTDAWQKLDQEVAATPMPEFYQKKMVWI------LCNDCGATSSVRFHVLAQK 447
           + D W+++D E    P P+   K  V        LCN+ GA   +R   L +K
Sbjct: 261 LDDVWEEIDLEKTGVPRPDRENKCKVMFTTRSIALCNNMGAEYKLRVEFLEKK 313

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>RNF38_HUMAN (Q9H0F5) RING finger protein 38|
          Length = 515

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = -3

Query: 710 FDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSACDM 585
           F+S   + VL C H  H +C+++  +  + +CP+C   A ++
Sbjct: 470 FESRQLLRVLPCNHEFHAKCVDKW-LKANRTCPICRADASEV 510

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>RC3H1_HUMAN (Q5TC82) Roquin (RING finger and C3H zinc finger protein 1)|
          Length = 1133

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -3

Query: 737 TAPVCYEYLFDSTMDISV-LHCGHTIHLECLNEMRVHHHFSCP 612
           + P+C +  FD T+   + L CGHT+   CLN++   H  +CP
Sbjct: 13  SCPICTQ-TFDETIRKPISLGCGHTVCKMCLNKL---HRKACP 51

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>GPR37_MOUSE (Q9QY42) Probable G-protein coupled receptor 37 precursor|
          Length = 600

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
 Frame = +2

Query: 455 PGRGSARSTSPRSRCRGSIPSSSGRTLAWVWRRPPGRASATHRSCRRPTASR---PGTRS 625
           P RG        +   G +   +    AW W+   G+  + H   R PT  +   P +  
Sbjct: 89  PPRGGDTGVIEEAAAAGPLGPPTKPPSAWRWKSAQGKEPSGHLRRRDPTDPQLFFPTSEG 148

Query: 626 GDEPSSRSGTP 658
           G+  S R G P
Sbjct: 149 GEMSSKRDGIP 159

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>ATL3G_ARATH (Q67YI6) RING-H2 finger protein ATL3G|
          Length = 411

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 677 CGHTIHLECLNEMRVHHHFSCPVC 606
           C H  HLEC++E  +  H +CP+C
Sbjct: 175 CFHAFHLECIDEW-LRSHPNCPLC 197

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>RNF38_MOUSE (Q8BI21) RING finger protein 38|
          Length = 518

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = -3

Query: 710 FDSTMDISVLHCGHTIHLECLNEMRVHHHFSCPVCSRSACDM 585
           F+S   + VL C H  H +C+++  +  + +CP+C   A ++
Sbjct: 473 FESRQLLRVLPCNHEFHAKCVDKW-LKGNRTCPICRADASEV 513


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,709,409
Number of Sequences: 219361
Number of extensions: 2409599
Number of successful extensions: 8982
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 8220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8945
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7932903580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result