>CAO_ARATH (Q9MBA1) Chlorophyllide a oxygenase, chloroplast precursor (EC|
           1.-.-.-) (Chlorophyll a oxygenase) (Chlorophyll b
           synthase)
          Length = 536

 Score =  172 bits (436), Expect(2) = 2e-43
 Identities = 79/98 (80%), Positives = 90/98 (91%)
 Frame = -2

Query: 663 LHQLHVCLPSSTNKTRLLYRMSLDFAPWMKHMPFMHLLWSHFAEKVLNEDLRLVLGQQDR 484
           LHQLHVCLPSS NKTRLLYRMSLDFAP +K++PFM  LW HFAE+VLNEDLRLVLGQQ+R
Sbjct: 438 LHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQER 497

Query: 483 MNNGANVWNWPVSYDKLGIRYRLWRDAVERGVDRLPFS 370
           M NGAN+WN PV+YDKLG+RYRLWR+AV+RG D+LPFS
Sbjct: 498 MLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPFS 535



 Score = 23.9 bits (50), Expect(2) = 2e-43
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1

Query: 691 KSTQQCATH 665
           KSTQQCATH
Sbjct: 429 KSTQQCATH 437

>RAPA_SHEON (Q8EJ93) RNA polymerase-associated protein rapA (EC 3.6.1.-)|
           (ATP-dependent helicase hepA)
          Length = 968

 Score = 33.5 bits (75), Expect = 0.63
 Identities = 28/93 (30%), Positives = 43/93 (46%)
 Frame = -2

Query: 657 QLHVCLPSSTNKTRLLYRMSLDFAPWMKHMPFMHLLWSHFAEKVLNEDLRLVLGQQDRMN 478
           Q+H+     T + RLL         +    P  H+L+S FAE++LN    LV G +D + 
Sbjct: 608 QIHLPYLQDTAQERLLQWYHQGLNAFELTCPGGHILFSEFAEELLNV---LVGGDEDELT 664

Query: 477 NGANVWNWPVSYDKLGIRYRLWRDAVERGVDRL 379
           N  N             RY+  + A+E+G D+L
Sbjct: 665 NLLN---------HTQSRYKELKHAMEQGRDKL 688

>WOX9_ARATH (Q6X7J4) WUSCHEL-related homeobox 9|
          Length = 378

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +1

Query: 445 RHWPVPNVSSIVHSVLLAEHKPQILIQDLLSEM*PQEVHERHVLHPGCEVERHPIQEP 618
           RHWP         S+  ++  P     D+ S + P   H       GCEVER P  +P
Sbjct: 6   RHWP---------SMFKSKPHPHQWQHDINSPLLPSASHRSSPFSSGCEVERSPEPKP 54

>UN93L_ARATH (Q94AA1) UNC93-like protein|
          Length = 464

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -1

Query: 316 FSRAIPWLGNGSQMTRMGRLFGRASQHGCSSGQILLQIEG-LWKRSPVKRMMGTIIAI 146
           F+ +I W+G G+ +T + R    A+ HG   G ++    G  W      ++ G +I +
Sbjct: 122 FAASIIWVGQGTYLTSIAR--SHATDHGLHEGSVIGVFNGEFWAMFACHQLFGNLITL 177

>HEM1_VIBCH (Q9KQ24) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 419

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +1

Query: 481 HSVLLAEHKPQILIQDLLSEM*PQEVHERHVLHPGCEVERHPIQEPGFIRR*RQAYMELV 660
           H V L E KP + + +       ++   RH++   C ++   + EP  + + +QAY E  
Sbjct: 75  HQVSLDELKPSLYVHE-------EQAAIRHLMRVACGLDSLVLGEPQILGQVKQAYAEAR 127

Query: 661 EN 666
           EN
Sbjct: 128 EN 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,547,777
Number of Sequences: 219361
Number of extensions: 2078916
Number of successful extensions: 5830
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5828
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6882837918
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)