ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasdn18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ083192.1| Oryza sativa (indica cultivar-group) clone 5S5H65... 281 1e-72
2gb|DQ119301.1| Oryza sativa (indica cultivar-group) putative ubi... 281 1e-72
3gb|AY104559.1| Zea mays PCO133879 mRNA sequence 238 2e-59
4gb|BT016292.1| Zea mays clone Contig125 mRNA sequence 230 4e-57
5dbj|AK058717.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 4e-42
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
8emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb... 139 1e-29
9dbj|AK067123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 8e-28
10dbj|AK059481.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 8e-28
11gb|AC108871.3| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
12dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
13gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
14dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone... 68 4e-08
15emb|CR936945.2| Medicago truncatula chromosome 5 clone mte1-67e6... 56 1e-04
16gb|AC171736.1| Lycopersicon esculentum chromosome 11 clone C11HB... 50 0.009
17dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
18dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
19dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
20emb|AL138849.12| Human DNA sequence from clone RP5-965L7 on chro... 44 0.54
21emb|AL139016.8| Human DNA sequence from clone RP4-658C17 on chro... 44 0.54
22gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete... 44 0.54
23emb|AL626783.16| Mouse DNA sequence from clone RP23-406B13 on ch... 44 0.54
24ref|NM_001016052.2| Xenopus tropicalis myosin X (myo10), mRNA 42 2.1
25gb|AC123835.4| Mus musculus BAC clone RP23-365J20 from chromosom... 42 2.1
26gb|AY104649.1| Zea mays PCO133877 mRNA sequence 42 2.1
27emb|CR762338.2| Xenopus tropicalis finished cDNA, clone TGas074f22 42 2.1
28dbj|AP001803.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 2.1
29emb|AL954156.3|CNS08CCU Oryza sativa chromosome 12, . BAC OSJNBa... 42 2.1
30gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 40 8.5
31ref|XM_476711.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.5
32ref|XM_513410.1| PREDICTED: Pan troglodytes similar to The KIAA0... 40 8.5
33ref|NM_015269.1| Homo sapiens zinc finger, CCHC domain containin... 40 8.5
34ref|NM_001009881.1| Homo sapiens zinc finger, CCHC domain contai... 40 8.5
35ref|NM_001009882.1| Homo sapiens zinc finger, CCHC domain contai... 40 8.5
36gb|BC035820.1| Homo sapiens zinc finger, CCHC domain containing ... 40 8.5
37gb|AC154583.3| Mus musculus BAC clone RP23-248H18 from chromosom... 40 8.5
38gb|AC007245.3| Homo sapiens BAC clone RP11-273L18 from 7, comple... 40 8.5
39ref|XM_532573.2| PREDICTED: Canis familiaris similar to zinc fin... 40 8.5
40ref|XM_853983.1| PREDICTED: Canis familiaris similar to zinc fin... 40 8.5
41gb|AC126444.3| Mus musculus BAC clone RP24-136A8 from chromosome... 40 8.5
42ref|NM_005019.3| Homo sapiens phosphodiesterase 1A, calmodulin-d... 40 8.5
43emb|AL606828.4| Human DNA sequence from clone RP11-20J6 on chrom... 40 8.5
44emb|AL591416.4| Human DNA sequence from clone RP11-108N13 on chr... 40 8.5
45gb|U61850.2|GGU61850 Gallus gallus m2 muscarinic acetylcholine r... 40 8.5
46gb|BC022480.1| Homo sapiens phosphodiesterase 1A, calmodulin-dep... 40 8.5
47emb|CR860282.1| Pongo pygmaeus mRNA; cDNA DKFZp459G145 (from clo... 40 8.5
48dbj|AK220327.1| Mus musculus mRNA for mKIAA0191 protein 40 8.5
49gb|AC010061.6| Drosophila melanogaster 3L BAC RP98-11F16 (Roswel... 40 8.5
50dbj|AK095733.1| Homo sapiens cDNA FLJ38414 fis, clone FEBRA2009514 40 8.5
51ref|NM_175472.3| Mus musculus zinc finger, CCHC domain containin... 40 8.5
52dbj|AK049279.1| Mus musculus ES cells cDNA, RIKEN full-length en... 40 8.5
53dbj|AK031299.1| Mus musculus 13 days embryo male testis cDNA, RI... 40 8.5
54dbj|AK041821.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 8.5
55dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
56dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
57gb|AC158181.2| Selaginella moellendorffii clone JGIASXY-5D1, com... 40 8.5
58emb|BX648783.1|HSM808934 Homo sapiens mRNA; cDNA DKFZp686I05143 ... 40 8.5
59gb|AC156454.2| Volvox carteri clone JGIAOBO-9I12, complete sequence 40 8.5
60gb|AF155197.1|AF155197 Acetivibrio cellulolyticus cellulosomal s... 40 8.5
61gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54... 40 8.5
62gb|AC160024.2| Pan troglodytes BAC clone CH251-374N3 from chromo... 40 8.5
63emb|AJ639769.1| Psidium guajava microsatellite DNA, clone mPgCIR20 40 8.5
64emb|CT571278.3| Mouse DNA sequence from clone RP24-372E22 on chr... 40 8.5
65dbj|D83776.1| Human mRNA for KIAA0191 gene, partial cds 40 8.5 
>gb|DQ083192.1| Oryza sativa (indica cultivar-group) clone 5S5H65 mRNA sequence
          Length = 741

 Score =  281 bits (142), Expect = 1e-72
 Identities = 220/246 (89%)
 Strand = Plus / Minus

                                                                       
Query: 335 ttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctgattagctgtgta 394
           ||||||||| || || ||||||||||||||| | ||||| ||||||||||| ||||| ||
Sbjct: 431 ttctcaattataaattttcacaggcttctcaaaagtgtgacgattctgattggctgtata 372

                                                                       
Query: 395 tgaccttttgggtgttgtgtcagtatgctccaagccaaggtattgttcccaagctccata 454
            |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 371 agacctttttggtgttgtgtcagtatgttccaagccaaggtattgttcccaagctccata 312

                                                                       
Query: 455 aacatctctcctctgaaaacgtgcagacacagcatcaatatcctggaggtattctggacg 514
           ||||||||||||||||||||||||||| ||| | || | ||||||||||||||| || ||
Sbjct: 311 aacatctctcctctgaaaacgtgcagatacaacgtcgacatcctggaggtattcaggccg 252

                                                                       
Query: 515 attcatggatatgaatgcagccttccacttggcgaattcttcattgggaactcggagttt 574
           |||||| ||||||||||||  ||||||||||| |||||| ||||  |||||||| |||||
Sbjct: 251 attcatagatatgaatgcaagcttccacttggagaattcctcatcaggaactcgaagttt 192

                 
Query: 575 tttctg 580
           ||||||
Sbjct: 191 tttctg 186



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                              
Query: 30  accagctttgctctacacaaacaaagcaacatcta 64
           ||||||||||||||||||||| |||||||||||||
Sbjct: 741 accagctttgctctacacaaataaagcaacatcta 707
to top
>gb|DQ119301.1| Oryza sativa (indica cultivar-group) putative ubiquitin protease
            mRNA, partial cds
          Length = 1593

 Score =  281 bits (142), Expect = 1e-72
 Identities = 220/246 (89%)
 Strand = Plus / Minus

                                                                        
Query: 335  ttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctgattagctgtgta 394
            ||||||||| || || ||||||||||||||| | ||||| ||||||||||| ||||| ||
Sbjct: 1056 ttctcaattataaattttcacaggcttctcaaaagtgtgacgattctgattggctgtata 997

                                                                        
Query: 395  tgaccttttgggtgttgtgtcagtatgctccaagccaaggtattgttcccaagctccata 454
             |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 996  agacctttttggtgttgtgtcagtatgttccaagccaaggtattgttcccaagctccata 937

                                                                        
Query: 455  aacatctctcctctgaaaacgtgcagacacagcatcaatatcctggaggtattctggacg 514
            ||||||||||||||||||||||||||| ||| | || | ||||||||||||||| || ||
Sbjct: 936  aacatctctcctctgaaaacgtgcagatacaacgtcgacatcctggaggtattcaggccg 877

                                                                        
Query: 515  attcatggatatgaatgcagccttccacttggcgaattcttcattgggaactcggagttt 574
            |||||| ||||||||||||  ||||||||||| |||||| ||||  |||||||| |||||
Sbjct: 876  attcatagatatgaatgcaagcttccacttggagaattcctcatcaggaactcgaagttt 817

                  
Query: 575  tttctg 580
            ||||||
Sbjct: 816  tttctg 811



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 61/64 (95%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    atgcccctaccaaaatatttttcttatgtaccagctttgctctacacaaacaaagcaaca 60
            |||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 1394 atgcccctaccaaaatctttt-cttatgtaccagctttgctctacacaaataaagcaaca 1336

                
Query: 61   tcta 64
            ||||
Sbjct: 1335 tcta 1332
to top
>gb|AY104559.1| Zea mays PCO133879 mRNA sequence
          Length = 962

 Score =  238 bits (120), Expect = 2e-59
 Identities = 246/288 (85%)
 Strand = Plus / Minus

                                                                       
Query: 334 tttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctgattagctgtgt 393
           |||||||||| || || ||||| ||||||||||| ||||| ||||||||||| |||||||
Sbjct: 459 tttctcaattataaattttcacgggcttctcataggtgtgccgattctgattggctgtgt 400

                                                                       
Query: 394 atgaccttttgggtgttgtgtcagtatgctccaagccaaggtattgttcccaagctccat 453
           | |||||||| | |||||| || || ||||||||||||||||||||||||||||| ||||
Sbjct: 399 aagaccttttcgatgttgtatcggtgtgctccaagccaaggtattgttcccaagcaccat 340

                                                                       
Query: 454 aaacatctctcctctgaaaacgtgcagacacagcatcaatatcctggaggtattctggac 513
           | ||||||||||||||||||||||| || ||| ||||| | ||||||||||| ||||| |
Sbjct: 339 atacatctctcctctgaaaacgtgctgatacaacatcagtgtcctggaggtactctggcc 280

                                                                       
Query: 514 gattcatggatatgaatgcagccttccacttggcgaattcttcattgggaactcggagtt 573
           | ||||||||||||||||||  ||||||||||| ||| || ||||  |||||||  ||||
Sbjct: 279 ggttcatggatatgaatgcaagcttccacttggagaagtcctcatccggaactctaagtt 220

                                                           
Query: 574 ttttctgcacacggtccattacctctgcagcggtctcgccttcacgga 621
           || | || |  || |||| |||||||||||| |||||  |||||||||
Sbjct: 219 ttctttggatgcgctccagtacctctgcagcagtctcaacttcacgga 172
to top
>gb|BT016292.1| Zea mays clone Contig125 mRNA sequence
          Length = 1106

 Score =  230 bits (116), Expect = 4e-57
 Identities = 245/288 (85%)
 Strand = Plus / Minus

                                                                       
Query: 329 gaaggtttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctgattagc 388
           ||||||||||||||| || || || || ||||||||||| ||||| ||||||||||| | 
Sbjct: 636 gaaggtttctcaattataaatttttacgggcttctcataggtgtgccgattctgattgga 577

                                                                       
Query: 389 tgtgtatgaccttttgggtgttgtgtcagtatgctccaagccaaggtattgttcccaagc 448
           |||||| |||| ||| | |||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 576 tgtgtaagaccgtttcgatgttgtatcagtgtgctccaagccaaggtattgttcccaagc 517

                                                                       
Query: 449 tccataaacatctctcctctgaaaacgtgcagacacagcatcaatatcctggaggtattc 508
            ||||| |||||||||| |||||||||||| || ||| | ||| | ||||||||||| ||
Sbjct: 516 accatatacatctctccgctgaaaacgtgctgatacaacgtcagtgtcctggaggtactc 457

                                                                       
Query: 509 tggacgattcatggatatgaatgcagccttccacttggcgaattcttcattgggaactcg 568
           ||| || ||||||||||||||||||  ||||||||||| ||| || ||||  ||||||| 
Sbjct: 456 tggccggttcatggatatgaatgcaagcttccacttggagaactcatcatcaggaactct 397

                                                           
Query: 569 gagttttttctgcacacggtccattacctctgcagcggtctcgccttc 616
            |||||| |||| |  || ||||||||||||||||| ||||| |||||
Sbjct: 396 aagttttctctggatgcgctccattacctctgcagcagtctcaccttc 349



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 7   ctaccaaaatatttttcttatgtaccagctttgctctaca 46
           ||||||| ||||||||||||||| | ||||||||||||||
Sbjct: 896 ctaccaacatatttttcttatgtgctagctttgctctaca 857
to top
>dbj|AK058717.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-E02, full
           insert sequence
          Length = 650

 Score =  180 bits (91), Expect = 4e-42
 Identities = 124/135 (91%)
 Strand = Plus / Minus

                                                                       
Query: 335 ttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctgattagctgtgta 394
           ||||||||| || || ||||||||||||||| | ||||| ||||||||||| ||||| ||
Sbjct: 135 ttctcaattataaattttcacaggcttctcaaaagtgtgacgattctgattggctgtata 76

                                                                       
Query: 395 tgaccttttgggtgttgtgtcagtatgctccaagccaaggtattgttcccaagctccata 454
            |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 75  agacctttttggtgttgtgtcagtatgttccaagccaaggtattgttcccaagctccata 16

                          
Query: 455 aacatctctcctctg 469
           |||||||||||||||
Sbjct: 15  aacatctctcctctg 1



 Score =  111 bits (56), Expect = 3e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgcccctaccaaaatatttttcttatgtaccagctttgctctacacaaacaaagcaaca 60
           |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 474 atgcccctaccaaaatctttttcttatgtaccagctttgctctacacaaataaagcaaca 415

               
Query: 61  tcta 64
           ||||
Sbjct: 414 tcta 411
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                            
Query: 380      ctgattagctgtgtatgaccttttgggtgttgtgtcagtatgctccaagccaaggtattg 439
                |||||| ||||| || |||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 18388163 ctgattggctgtataagacctttttggtgttgtgtcagtatgttccaagccaaggtattg 18388104

                                              
Query: 440      ttcccaagctccataaacatctctcctctg 469
                ||||||||||||||||||||||||||||||
Sbjct: 18388103 ttcccaagctccataaacatctctcctctg 18388074



 Score =  111 bits (56), Expect = 3e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                            
Query: 1        atgcccctaccaaaatatttttcttatgtaccagctttgctctacacaaacaaagcaaca 60
                |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 18389945 atgcccctaccaaaatctttttcttatgtaccagctttgctctacacaaataaagcaaca 18389886

                    
Query: 61       tcta 64
                ||||
Sbjct: 18389885 tcta 18389882



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                            
Query: 467      ctgaaaacgtgcagacacagcatcaatatcctggaggtattctggacgattcatggatat 526
                ||||||||||||||| ||| | || | ||||||||||||||| || |||||||| |||||
Sbjct: 18387974 ctgaaaacgtgcagatacaacgtcgacatcctggaggtattcaggccgattcatagatat 18387915

                                 
Query: 527      gaatgcagccttccact 543
                |||||||  ||||||||
Sbjct: 18387914 gaatgcaagcttccact 18387898



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                                
Query: 335      ttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctg 382
                ||||||||| || || ||||||||||||||| | ||||| ||||||||
Sbjct: 18389606 ttctcaattataaattttcacaggcttctcaaaagtgtgacgattctg 18389559



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 575     tttctgcacacggtccattac 595
               |||||||||||||||||||||
Sbjct: 6515682 tttctgcacacggtccattac 6515702
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                            
Query: 380      ctgattagctgtgtatgaccttttgggtgttgtgtcagtatgctccaagccaaggtattg 439
                |||||| ||||| || |||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 18314389 ctgattggctgtataagacctttttggtgttgtgtcagtatgttccaagccaaggtattg 18314330

                                              
Query: 440      ttcccaagctccataaacatctctcctctg 469
                ||||||||||||||||||||||||||||||
Sbjct: 18314329 ttcccaagctccataaacatctctcctctg 18314300



 Score =  111 bits (56), Expect = 3e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                            
Query: 1        atgcccctaccaaaatatttttcttatgtaccagctttgctctacacaaacaaagcaaca 60
                |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 18316171 atgcccctaccaaaatctttttcttatgtaccagctttgctctacacaaataaagcaaca 18316112

                    
Query: 61       tcta 64
                ||||
Sbjct: 18316111 tcta 18316108



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                            
Query: 467      ctgaaaacgtgcagacacagcatcaatatcctggaggtattctggacgattcatggatat 526
                ||||||||||||||| ||| | || | ||||||||||||||| || |||||||| |||||
Sbjct: 18314200 ctgaaaacgtgcagatacaacgtcgacatcctggaggtattcaggccgattcatagatat 18314141

                                 
Query: 527      gaatgcagccttccact 543
                |||||||  ||||||||
Sbjct: 18314140 gaatgcaagcttccact 18314124



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                                
Query: 335      ttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctg 382
                ||||||||| || || ||||||||||||||| | ||||| ||||||||
Sbjct: 18315832 ttctcaattataaattttcacaggcttctcaaaagtgtgacgattctg 18315785



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 575     tttctgcacacggtccattac 595
               |||||||||||||||||||||
Sbjct: 6515557 tttctgcacacggtccattac 6515577
to top
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 138585

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                         
Query: 380   ctgattagctgtgtatgaccttttgggtgttgtgtcagtatgctccaagccaaggtattg 439
             |||||| ||||| || |||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 40062 ctgattggctgtataagacctttttggtgttgtgtcagtatgttccaagccaaggtattg 40003

                                           
Query: 440   ttcccaagctccataaacatctctcctctg 469
             ||||||||||||||||||||||||||||||
Sbjct: 40002 ttcccaagctccataaacatctctcctctg 39973



 Score =  111 bits (56), Expect = 3e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                         
Query: 1     atgcccctaccaaaatatttttcttatgtaccagctttgctctacacaaacaaagcaaca 60
             |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 41844 atgcccctaccaaaatctttttcttatgtaccagctttgctctacacaaataaagcaaca 41785

                 
Query: 61    tcta 64
             ||||
Sbjct: 41784 tcta 41781



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                         
Query: 467   ctgaaaacgtgcagacacagcatcaatatcctggaggtattctggacgattcatggatat 526
             ||||||||||||||| ||| | || | ||||||||||||||| || |||||||| |||||
Sbjct: 39873 ctgaaaacgtgcagatacaacgtcgacatcctggaggtattcaggccgattcatagatat 39814

                              
Query: 527   gaatgcagccttccact 543
             |||||||  ||||||||
Sbjct: 39813 gaatgcaagcttccact 39797



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 335   ttctcaattgtagatcttcacaggcttctcatatgtgtgtcgattctg 382
             ||||||||| || || ||||||||||||||| | ||||| ||||||||
Sbjct: 41505 ttctcaattataaattttcacaggcttctcaaaagtgtgacgattctg 41458
to top
>dbj|AK067123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096M22, full
            insert sequence
          Length = 3975

 Score =  133 bits (67), Expect = 8e-28
 Identities = 199/243 (81%)
 Strand = Plus / Minus

                                                                        
Query: 338  tcaattgtagatcttcacaggcttctcatatgtgtgtcgattctgattagctgtgtatga 397
            ||||||||| ||  |||| ||||||||||| ||||| || |||||||| |||||||| | 
Sbjct: 3348 tcaattgtaaattctcactggcttctcataggtgtgacggttctgattggctgtgtaggc 3289

                                                                        
Query: 398  ccttttgggtgttgtgtcagtatgctccaagccaaggtattgttcccaagctccataaac 457
            |||||| ||||  || |||| ||||||||| ||||| || || ||||| |||||||| ||
Sbjct: 3288 cctttttggtgcagtatcagcatgctccaaaccaagatactgctcccaggctccatagac 3229

                                                                        
Query: 458  atctctcctctgaaaacgtgcagacacagcatcaatatcctggaggtattctggacgatt 517
            |||||||||||| ||||| ||||| ||| ||||   ||| |||||||| ||||| || ||
Sbjct: 3228 atctctcctctggaaacgggcagatacaacatctgaatcttggaggtaatctggccggtt 3169

                                                                        
Query: 518  catggatatgaatgcagccttccacttggcgaattcttcattgggaactcggagtttttt 577
            |||||||||||| ||    |||||||||  |||||| ||||  || ||| ||||||||||
Sbjct: 3168 catggatatgaaagcgaatttccacttgcagaattcctcatcagggacttggagtttttt 3109

               
Query: 578  ctg 580
            |||
Sbjct: 3108 ctg 3106
to top
>dbj|AK059481.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F05, full
           insert sequence
          Length = 1098

 Score =  133 bits (67), Expect = 8e-28
 Identities = 199/243 (81%)
 Strand = Plus / Minus

                                                                       
Query: 338 tcaattgtagatcttcacaggcttctcatatgtgtgtcgattctgattagctgtgtatga 397
           ||||||||| ||  |||| ||||||||||| ||||| || |||||||| |||||||| | 
Sbjct: 511 tcaattgtaaattctcactggcttctcataggtgtgacggttctgattggctgtgtaggc 452

                                                                       
Query: 398 ccttttgggtgttgtgtcagtatgctccaagccaaggtattgttcccaagctccataaac 457
           |||||| ||||  || |||| ||||||||| ||||| || || ||||| |||||||| ||
Sbjct: 451 cctttttggtgcagtatcagcatgctccaaaccaagatactgctcccaggctccatagac 392

                                                                       
Query: 458 atctctcctctgaaaacgtgcagacacagcatcaatatcctggaggtattctggacgatt 517
           |||||||||||| ||||| ||||| ||| ||||   ||| |||||||| ||||| || ||
Sbjct: 391 atctctcctctggaaacgggcagatacaacatctgaatcttggaggtaatctggccggtt 332

                                                                       
Query: 518 catggatatgaatgcagccttccacttggcgaattcttcattgggaactcggagtttttt 577
           |||||||||||| ||    |||||||||  |||||| ||||  || ||| ||||||||||
Sbjct: 331 catggatatgaaagcgaatttccacttgcagaattcctcatcagggacttggagtttttt 272

              
Query: 578 ctg 580
           |||
Sbjct: 271 ctg 269
to top
>gb|AC108871.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0077M24, complete sequence
          Length = 128920

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                         
Query: 380   ctgattagctgtgtatgaccttttgggtgttgtgtcagtatgctccaagccaaggtattg 439
             |||||| |||||||| | |||||| ||||  || |||| ||||||||| ||||| || ||
Sbjct: 82998 ctgattggctgtgtaggccctttttggtgcagtatcagcatgctccaaaccaagatactg 83057

                                             
Query: 440   ttcccaagctccataaacatctctcctctgaa 471
              ||||| |||||||| ||||||||||||||||
Sbjct: 83058 ctcccaggctccatagacatctctcctctgaa 83089



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 498   tggaggtattctggacgattcatggatatgaa 529
             |||||||| ||||| || ||||||||||||||
Sbjct: 83212 tggaggtaatctggccggttcatggatatgaa 83243
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                            
Query: 380      ctgattagctgtgtatgaccttttgggtgttgtgtcagtatgctccaagccaaggtattg 439
                |||||| |||||||| | |||||| ||||  || |||| ||||||||| ||||| || ||
Sbjct: 20647990 ctgattggctgtgtaggccctttttggtgcagtatcagcatgctccaaaccaagatactg 20648049

                                                
Query: 440      ttcccaagctccataaacatctctcctctgaa 471
                 ||||| |||||||| ||||||||||||||||
Sbjct: 20648050 ctcccaggctccatagacatctctcctctgaa 20648081



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 498      tggaggtattctggacgattcatggatatgaa 529
                |||||||| ||||| || ||||||||||||||
Sbjct: 20648204 tggaggtaatctggccggttcatggatatgaa 20648235
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                            
Query: 380      ctgattagctgtgtatgaccttttgggtgttgtgtcagtatgctccaagccaaggtattg 439
                |||||| |||||||| | |||||| ||||  || |||| ||||||||| ||||| || ||
Sbjct: 20958225 ctgattggctgtgtaggccctttttggtgcagtatcagcatgctccaaaccaagatactg 20958284

                                                
Query: 440      ttcccaagctccataaacatctctcctctgaa 471
                 ||||| |||||||| ||||||||||||||||
Sbjct: 20958285 ctcccaggctccatagacatctctcctctgaa 20958316



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 498      tggaggtattctggacgattcatggatatgaa 529
                |||||||| ||||| || ||||||||||||||
Sbjct: 20958439 tggaggtaatctggccggttcatggatatgaa 20958470
to top
>dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02D13, TM0546,
             complete sequence
          Length = 107979

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                       
Query: 412   tgtcagtatgctccaagccaaggtattgttcccaagctccataaacatctctcctctg 469
             |||||||||||||||| ||||| || || |||||||| |||||||||||||| |||||
Sbjct: 76922 tgtcagtatgctccaaaccaagatactgctcccaagcaccataaacatctcttctctg 76979
to top
>emb|CR936945.2| Medicago truncatula chromosome 5 clone mte1-67e6, COMPLETE SEQUENCE
          Length = 127675

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 414  tcagtatgctccaagccaaggtattgttcccaagctccataaacatctctcctctg 469
            |||||||||||||||||||| || || |||||||| ||||| || ||||| |||||
Sbjct: 5254 tcagtatgctccaagccaagatactgctcccaagcaccatatacgtctcttctctg 5199
to top
>gb|AC171736.1| Lycopersicon esculentum chromosome 11 clone C11HBa0323E19, complete
             sequence
          Length = 141216

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 412   tgtcagtatgctccaagccaaggtattgttcccaagctccataaacatc 460
             |||||| ||| ||||||||||| || || |||||||| |||||||||||
Sbjct: 45155 tgtcagaatgttccaagccaagatactgctcccaagcaccataaacatc 45107
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 32       cagctttgctctacacaaacaaag 55
                ||||||||||||||||||||||||
Sbjct: 12789892 cagctttgctctacacaaacaaag 12789915
to top
>dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0086N11
          Length = 146185

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 32     cagctttgctctacacaaacaaag 55
              ||||||||||||||||||||||||
Sbjct: 138169 cagctttgctctacacaaacaaag 138192
to top
>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0073A18
          Length = 176755

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 32   cagctttgctctacacaaacaaag 55
            ||||||||||||||||||||||||
Sbjct: 9374 cagctttgctctacacaaacaaag 9397
to top
>emb|AL138849.12| Human DNA sequence from clone RP5-965L7 on chromosome 1p32.1-33
             Contains the 3' ends of genes FLJ34719 and KIAA0191,
             complete sequence
          Length = 127006

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 8     taccaaaatatttttcttatgt 29
             ||||||||||||||||||||||
Sbjct: 94767 taccaaaatatttttcttatgt 94788
to top
>emb|AL139016.8| Human DNA sequence from clone RP4-658C17 on chromosome 1p11.1-13.3,
             complete sequence
          Length = 100643

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 13    aaatatttttcttatgtaccag 34
             ||||||||||||||||||||||
Sbjct: 26796 aaatatttttcttatgtaccag 26817
to top
>gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete sequence
          Length = 150214

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 86    tcaggacaatgaaatcagcatg 107
             ||||||||||||||||||||||
Sbjct: 27674 tcaggacaatgaaatcagcatg 27653
to top
>emb|AL626783.16| Mouse DNA sequence from clone RP23-406B13 on chromosome 4, complete
            sequence
          Length = 179370

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 8    taccaaaatatttttcttatgt 29
            ||||||||||||||||||||||
Sbjct: 9681 taccaaaatatttttcttatgt 9660
to top
>ref|NM_001016052.2| Xenopus tropicalis myosin X (myo10), mRNA
          Length = 1383

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 124 ggagcaggcaagacggaaagc 144
           |||||||||||||||||||||
Sbjct: 878 ggagcaggcaagacggaaagc 898
to top
>gb|AC123835.4| Mus musculus BAC clone RP23-365J20 from chromosome 9, complete sequence
          Length = 219799

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     gtctatcacactcaggacaat 95
              |||||||||||||||||||||
Sbjct: 146895 gtctatcacactcaggacaat 146875
to top
>gb|AY104649.1| Zea mays PCO133877 mRNA sequence
          Length = 927

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 588 tccattacctctgcagcggtctcgccttc 616
           ||||||||||||||||| ||||| |||||
Sbjct: 891 tccattacctctgcagcagtctcaccttc 863
to top
>emb|CR762338.2| Xenopus tropicalis finished cDNA, clone TGas074f22
          Length = 1383

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 124 ggagcaggcaagacggaaagc 144
           |||||||||||||||||||||
Sbjct: 878 ggagcaggcaagacggaaagc 898
to top
>dbj|AP001803.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-100N3, complete
             sequences
          Length = 159372

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 217   cacaaatgaccatatatttga 237
             |||||||||||||||||||||
Sbjct: 82776 cacaaatgaccatatatttga 82796
to top
>emb|AL954156.3|CNS08CCU Oryza sativa chromosome 12, . BAC OSJNBa0096K13 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 138508

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 575   tttctgcacacggtccattac 595
             |||||||||||||||||||||
Sbjct: 68822 tttctgcacacggtccattac 68842
to top
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 43      tacacaaacaaagcaacatctata 66
               |||||||||||||||||| |||||
Sbjct: 1438573 tacacaaacaaagcaacaactata 1438596
to top
>ref|XM_476711.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3351

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 419  atgctccaagccaaggtattgttcccaagctccata 454
            ||||||||  ||||| ||||| ||||||||||||||
Sbjct: 3270 atgctccagtccaagatattgctcccaagctccata 3235
to top
>ref|XM_513410.1| PREDICTED: Pan troglodytes similar to The KIAA0191 gene is
           expressed ubiquitously.~The KIAA0191 protein retains the
           C2H2 zinc-finger at its N-terminal region. (LOC456859),
           mRNA
          Length = 5007

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  ccaaaatatttttcttatgt 29
           ||||||||||||||||||||
Sbjct: 985 ccaaaatatttttcttatgt 966
to top
>ref|NM_015269.1| Homo sapiens zinc finger, CCHC domain containing 11 (ZCCHC11),
            transcript variant 2, mRNA
          Length = 5842

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   ccaaaatatttttcttatgt 29
            ||||||||||||||||||||
Sbjct: 1234 ccaaaatatttttcttatgt 1215
to top
>ref|NM_001009881.1| Homo sapiens zinc finger, CCHC domain containing 11 (ZCCHC11),
            transcript variant 1, mRNA
          Length = 5845

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   ccaaaatatttttcttatgt 29
            ||||||||||||||||||||
Sbjct: 1234 ccaaaatatttttcttatgt 1215
to top
>ref|NM_001009882.1| Homo sapiens zinc finger, CCHC domain containing 11 (ZCCHC11),
            transcript variant 3, mRNA
          Length = 5830

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   ccaaaatatttttcttatgt 29
            ||||||||||||||||||||
Sbjct: 1234 ccaaaatatttttcttatgt 1215
to top
>gb|BC035820.1| Homo sapiens zinc finger, CCHC domain containing 11, mRNA (cDNA clone
            IMAGE:5553553), partial cds
          Length = 2426

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   ccaaaatatttttcttatgt 29
            ||||||||||||||||||||
Sbjct: 1245 ccaaaatatttttcttatgt 1226
to top
>gb|AC154583.3| Mus musculus BAC clone RP23-248H18 from chromosome 13, complete sequence
          Length = 191052

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 363    tcatatgtgtgtcgattctg 382
              ||||||||||||||||||||
Sbjct: 154048 tcatatgtgtgtcgattctg 154067
to top
>gb|AC007245.3| Homo sapiens BAC clone RP11-273L18 from 7, complete sequence
          Length = 133137

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 476   tgcagacacagcatcaatat 495
             ||||||||||||||||||||
Sbjct: 93275 tgcagacacagcatcaatat 93294
to top
>ref|XM_532573.2| PREDICTED: Canis familiaris similar to zinc finger, CCHC domain
            containing 11 isoform b, transcript variant 1
            (LOC475349), mRNA
          Length = 5811

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   ccaaaatatttttcttatgt 29
            ||||||||||||||||||||
Sbjct: 1230 ccaaaatatttttcttatgt 1211
to top
>ref|XM_853983.1| PREDICTED: Canis familiaris similar to zinc finger, CCHC domain
           containing 11 isoform b, transcript variant 2
           (LOC475349), mRNA
          Length = 5206

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  ccaaaatatttttcttatgt 29
           ||||||||||||||||||||
Sbjct: 613 ccaaaatatttttcttatgt 594
to top
>gb|AC126444.3| Mus musculus BAC clone RP24-136A8 from chromosome 14, complete sequence
          Length = 141017

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 111   gcttcgttgtcagggagcaggcaa 134
             |||||||||||||| |||||||||
Sbjct: 56244 gcttcgttgtcaggtagcaggcaa 56221
to top
>ref|NM_005019.3| Homo sapiens phosphodiesterase 1A, calmodulin-dependent (PDE1A),
            transcript variant 1, mRNA
          Length = 2414

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   aggacaatgaaatcagcatg 107
            ||||||||||||||||||||
Sbjct: 1830 aggacaatgaaatcagcatg 1849
to top
>emb|AL606828.4| Human DNA sequence from clone RP11-20J6 on chromosome 6, complete
             sequence
          Length = 33887

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 389   tgtgtatgaccttttgggtg 408
             ||||||||||||||||||||
Sbjct: 19147 tgtgtatgaccttttgggtg 19128
to top
>emb|AL591416.4| Human DNA sequence from clone RP11-108N13 on chromosome 6 Contains a
             ribosomal protein L6 (RPL6) pseudogene and the 5' end of a
             novel gene, complete sequence
          Length = 157068

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   agacacagcatcaatatcct 498
             ||||||||||||||||||||
Sbjct: 36537 agacacagcatcaatatcct 36518
to top
>gb|U61850.2|GGU61850 Gallus gallus m2 muscarinic acetylcholine receptor gene, promoter
           region and exon 1
          Length = 3175

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 206 agaccttggcacacaaatga 225
           ||||||||||||||||||||
Sbjct: 856 agaccttggcacacaaatga 837
to top
>gb|BC022480.1| Homo sapiens phosphodiesterase 1A, calmodulin-dependent, transcript
            variant 1, mRNA (cDNA clone MGC:26303 IMAGE:4814064),
            complete cds
          Length = 2322

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   aggacaatgaaatcagcatg 107
            ||||||||||||||||||||
Sbjct: 1881 aggacaatgaaatcagcatg 1900
to top
>emb|CR860282.1| Pongo pygmaeus mRNA; cDNA DKFZp459G145 (from clone DKFZp459G145)
          Length = 4003

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   ccaaaatatttttcttatgt 29
            ||||||||||||||||||||
Sbjct: 1245 ccaaaatatttttcttatgt 1226
to top
>dbj|AK220327.1| Mus musculus mRNA for mKIAA0191 protein
          Length = 4710

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  ccaaaatatttttcttatgt 29
           ||||||||||||||||||||
Sbjct: 797 ccaaaatatttttcttatgt 778
to top
>gb|AC010061.6| Drosophila melanogaster 3L BAC RP98-11F16 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 165318

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 389   tgtgtatgaccttttgggtg 408
             ||||||||||||||||||||
Sbjct: 79502 tgtgtatgaccttttgggtg 79483
to top
>dbj|AK095733.1| Homo sapiens cDNA FLJ38414 fis, clone FEBRA2009514
          Length = 2245

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   ccaaaatatttttcttatgt 29
            ||||||||||||||||||||
Sbjct: 1263 ccaaaatatttttcttatgt 1244
to top
>ref|NM_175472.3| Mus musculus zinc finger, CCHC domain containing 11 (Zcchc11), mRNA
          Length = 6054

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   ccaaaatatttttcttatgt 29
            ||||||||||||||||||||
Sbjct: 1549 ccaaaatatttttcttatgt 1530
to top
>dbj|AK049279.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
           clone:C330018P17 product:zinc finger, CCHC domain
           containing 11, full insert sequence
          Length = 1789

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  ccaaaatatttttcttatgt 29
           ||||||||||||||||||||
Sbjct: 538 ccaaaatatttttcttatgt 519
to top
>dbj|AK031299.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:6030404K05 product:hypothetical
           Zn-finger, CCHC type/PAP/25A-associated domain/PAP/25A
           core domain/Zinc finger CCHC-type profile/Zn-finger,
           C2H2 type containing protein, full insert sequence
          Length = 3282

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  ccaaaatatttttcttatgt 29
           ||||||||||||||||||||
Sbjct: 942 ccaaaatatttttcttatgt 923
to top
>dbj|AK041821.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630040F24 product:zinc finger, CCHC
            domain containing 11, full insert sequence
          Length = 1643

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   ccaaaatatttttcttatgt 29
            ||||||||||||||||||||
Sbjct: 1555 ccaaaatatttttcttatgt 1536
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 419     atgctccaagccaaggtattgttcccaagctccata 454
               ||||||||  ||||| ||||| ||||||||||||||
Sbjct: 3455956 atgctccagtccaagatattgctcccaagctccata 3455921
to top
>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0428D12
          Length = 141678

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 419   atgctccaagccaaggtattgttcccaagctccata 454
             ||||||||  ||||| ||||| ||||||||||||||
Sbjct: 95776 atgctccagtccaagatattgctcccaagctccata 95741
to top
>gb|AC158181.2| Selaginella moellendorffii clone JGIASXY-5D1, complete sequence
          Length = 34893

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 342  ttgtagatcttcacaggctt 361
            ||||||||||||||||||||
Sbjct: 4143 ttgtagatcttcacaggctt 4124
to top
>emb|BX648783.1|HSM808934 Homo sapiens mRNA; cDNA DKFZp686I05143 (from clone DKFZp686I05143)
          Length = 4319

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  ccaaaatatttttcttatgt 29
           ||||||||||||||||||||
Sbjct: 650 ccaaaatatttttcttatgt 631
to top
>gb|AC156454.2| Volvox carteri clone JGIAOBO-9I12, complete sequence
          Length = 36564

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   gggtgttgtgtcagtatgct 423
             ||||||||||||||||||||
Sbjct: 15663 gggtgttgtgtcagtatgct 15682
to top
>gb|AF155197.1|AF155197 Acetivibrio cellulolyticus cellulosomal scaffoldin precursor (cipV)
           gene, complete cds
          Length = 6555

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 7   ctaccaaaatatttttctta 26
           ||||||||||||||||||||
Sbjct: 568 ctaccaaaatatttttctta 587
to top
>gb|AE003531.3| Drosophila melanogaster chromosome 3L, section 54 of 83 of the complete
              sequence
          Length = 271869

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 389    tgtgtatgaccttttgggtg 408
              ||||||||||||||||||||
Sbjct: 187953 tgtgtatgaccttttgggtg 187934
to top
>gb|AC160024.2| Pan troglodytes BAC clone CH251-374N3 from chromosome unknown, complete
              sequence
          Length = 163279

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    tctttagcacactttctcag 289
              ||||||||||||||||||||
Sbjct: 159569 tctttagcacactttctcag 159588
to top
>emb|AJ639769.1| Psidium guajava microsatellite DNA, clone mPgCIR20
          Length = 351

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 450 ccataaacatctctcctctg 469
           ||||||||||||||||||||
Sbjct: 343 ccataaacatctctcctctg 324
to top
>emb|CT571278.3| Mouse DNA sequence from clone RP24-372E22 on chromosome 13, complete
             sequence
          Length = 47954

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 363   tcatatgtgtgtcgattctg 382
             ||||||||||||||||||||
Sbjct: 23300 tcatatgtgtgtcgattctg 23281
to top
>dbj|D83776.1| Human mRNA for KIAA0191 gene, partial cds
          Length = 5203

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 10  ccaaaatatttttcttatgt 29
           ||||||||||||||||||||
Sbjct: 618 ccaaaatatttttcttatgt 599


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,113,237
Number of Sequences: 3902068
Number of extensions: 6113237
Number of successful extensions: 115118
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114777
Number of HSP's gapped (non-prelim): 337
length of query: 621
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 598
effective length of database: 17,143,297,704
effective search space: 10251692026992
effective search space used: 10251692026992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top