>gb|AY525641.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;3 mRNA,
           complete cds
          Length = 829

 Score =  159 bits (80), Expect = 6e-36
 Identities = 106/117 (90%)
 Strand = Plus / Minus

                                                                       
Query: 186 gcttagtagtcgttgctggcgacgggggtgtggttgncgcacatgtacaggtaccgntng 245
           |||||||||||||||| |||||||| |||||||| | ||||||||||||||||||| | |
Sbjct: 800 gcttagtagtcgttgccggcgacggcggtgtggtcgtcgcacatgtacaggtaccggtag 741

                                                                    
Query: 246 acgatgccggcnaggccaccgccgatgagcgggccggnccantagatncagatgttg 302
           |||| |||||| ||||||||||||||||||||||||| ||| ||||| |||||||||
Sbjct: 740 acgacgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttg 684

>gb|U86763.1|TAU86763 Triticum aestivum delta-type tonoplast intrinsic protein mRNA,
           complete cds
          Length = 1067

 Score =  141 bits (71), Expect = 1e-30
 Identities = 195/238 (81%), Gaps = 18/238 (7%)
 Strand = Plus / Minus

                                                                       
Query: 56  gctttgatctgaaccaatacaacatgacgttcttcacatcatnnagacattc-------t 108
           |||| |||||||||||| |||||| || ||||||||||||||  | ||||||       |
Sbjct: 932 gcttcgatctgaaccaa-acaacaggatgttcttcacatcatcgaaacattcgtgagact 874

                                                                       
Query: 109 gaccaccacgcacgcacttttttatgttgccgaaggcatcatggaaaccaaacaccgaac 168
           | |||||||| ||||||||||| |||||||||||||||| |||||         ||||||
Sbjct: 873 gcccaccacgtacgcacttttt-atgttgccgaaggcattatgga---------ccgaac 824

                                                                       
Query: 169 gacccttcacatggatggcttagtagtcgttgctggcgacgggggtgtggttgncgcaca 228
           ||| |||| ||||| |||||||||||||||||| |||||||||| |||||| | | ||||
Sbjct: 823 gactcttcccatggctggcttagtagtcgttgccggcgacggggctgtggtcgtcccaca 764

                                                                     
Query: 229 tgtacaggtaccgntngacgatgccggcnaggccaccgccgatgagcgggccggncca 286
           |||| ||||| || |  |||| |||||| ||||||||||||||||||||||||| |||
Sbjct: 763 tgtataggtatcggtaaacgacgccggcgaggccaccgccgatgagcgggccggccca 706

>gb|AY525640.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;2 mRNA,
           complete cds
          Length = 853

 Score =  139 bits (70), Expect = 6e-30
 Identities = 102/115 (88%)
 Strand = Plus / Minus

                                                                       
Query: 188 ttagtagtcgttgctggcgacgggggtgtggttgncgcacatgtacaggtaccgntngac 247
           |||||||||||||| |||||||| | |||||| | |||||||||||| |||||| | |||
Sbjct: 801 ttagtagtcgttgccggcgacggagctgtggtcgtcgcacatgtacacgtaccggtagac 742

                                                                  
Query: 248 gatgccggcnaggccaccgccgatgagcgggccggnccantagatncagatgttg 302
           || |||||| ||||||||||||||||||||||||| ||| ||||| |||||||||
Sbjct: 741 gacgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttg 687

>gb|AY525639.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;1 mRNA,
           complete cds
          Length = 817

 Score =  131 bits (66), Expect = 1e-27
 Identities = 104/119 (87%)
 Strand = Plus / Minus

                                                                       
Query: 184 tggcttagtagtcgttgctggcgacgggggtgtggttgncgcacatgtacaggtaccgnt 243
           |||||||||||||||||| |||||||| | |||||| | |||||||||| ||||| || |
Sbjct: 806 tggcttagtagtcgttgccggcgacggagctgtggtcgtcgcacatgtataggtatcggt 747

                                                                      
Query: 244 ngacgatgccggcnaggccaccgccgatgagcgggccggnccantagatncagatgttg 302
            ||||| |||||| ||||||||||||||||||||||||| ||| ||||  |||||||||
Sbjct: 746 agacgacgccggcgaggccaccgccgatgagcgggccggcccagtagacccagatgttg 688

>ref|XM_470213.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 753

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 251 gccggcnaggccaccgccgatgagcgggcc 280
           |||||| ||||||||||||||||| |||||
Sbjct: 690 gccggcgaggccaccgccgatgagtgggcc 661

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 251     gccggcnaggccaccgccgatgagcgggcc 280
               |||||| ||||||||||||||||| |||||
Sbjct: 2544792 gccggcgaggccaccgccgatgagtgggcc 2544821

>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0067N01, from chromosome 3, complete sequence
          Length = 159636

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 251    gccggcnaggccaccgccgatgagcgggcc 280
              |||||| ||||||||||||||||| |||||
Sbjct: 125302 gccggcgaggccaccgccgatgagtgggcc 125273

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 251     gccggcnaggccaccgccgatgagcgggcc 280
               |||||| ||||||||||||||||| |||||
Sbjct: 2544902 gccggcgaggccaccgccgatgagtgggcc 2544931

>dbj|D25534.1|RICYK333 Oryza sativa yk333 mRNA for gamma-Tip, complete cds
          Length = 1080

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 251 gccggcnaggccaccgccgatgagcgggcc 280
           |||||| ||||||||||||||||| |||||
Sbjct: 768 gccggcgaggccaccgccgatgagtgggcc 739

>dbj|AK104123.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C12, full
           insert sequence
          Length = 1034

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 251 gccggcnaggccaccgccgatgagcgggcc 280
           |||||| ||||||||||||||||| |||||
Sbjct: 777 gccggcgaggccaccgccgatgagtgggcc 748

>dbj|AK068986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E16, full
           insert sequence
          Length = 1082

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 251 gccggcnaggccaccgccgatgagcgggcc 280
           |||||| ||||||||||||||||| |||||
Sbjct: 779 gccggcgaggccaccgccgatgagtgggcc 750

>dbj|AK059438.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G11, full
           insert sequence
          Length = 551

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 251 gccggcnaggccaccgccgatgagcgggcc 280
           |||||| ||||||||||||||||| |||||
Sbjct: 303 gccggcgaggccaccgccgatgagtgggcc 274

>dbj|AK058322.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B06, full
           insert sequence
          Length = 1055

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 251 gccggcnaggccaccgccgatgagcgggcc 280
           |||||| ||||||||||||||||| |||||
Sbjct: 775 gccggcgaggccaccgccgatgagtgggcc 746

>gb|AC006012.2| Homo sapiens PAC clone RP5-942I16 from 7, complete sequence
          Length = 121598

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    ggcatcatggaaaccaaaca 162
              ||||||||||||||||||||
Sbjct: 113843 ggcatcatggaaaccaaaca 113824

>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein
          Length = 1020

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 251 gccggcnaggccaccgccgatgagcgggccg 281
           |||||| ||||| ||||||||||| ||||||
Sbjct: 753 gccggcgaggccgccgccgatgagggggccg 723

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 246     acgatgccggcnaggccaccgcc 268
               ||||||||||| |||||||||||
Sbjct: 3903879 acgatgccggccaggccaccgcc 3903901

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 251    gccggcnaggccaccgccgatga 273
              |||||| ||||||||||||||||
Sbjct: 505313 gccggcgaggccaccgccgatga 505291

>gb|AY243803.1| Zea mays tonoplast water channel (TIP1-1) mRNA, complete cds
          Length = 1039

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 251 gccggcnaggccaccgccgatgagcgggccg 281
           |||||| ||||| ||||||||||| ||||||
Sbjct: 691 gccggcgaggccgccgccgatgagggggccg 661

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    caccgccgatgagcgggccg 281
              ||||||||||||||||||||
Sbjct: 557849 caccgccgatgagcgggccg 557868

>gb|AY104464.1| Zea mays PCO114899 mRNA sequence
          Length = 1167

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 251 gccggcnaggccaccgccgatgagcgggccg 281
           |||||| ||||| ||||||||||| ||||||
Sbjct: 786 gccggcgaggccgccgccgatgagggggccg 756

>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA,
           complete cds
          Length = 1133

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 251 gccggcnaggccaccgccgatgagcgggccg 281
           |||||| ||||| ||||||||||| ||||||
Sbjct: 784 gccggcgaggccgccgccgatgagggggccg 754


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,961,709
Number of Sequences: 3902068
Number of extensions: 1961709
Number of successful extensions: 30863
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30778
Number of HSP's gapped (non-prelim): 84
length of query: 306
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 284
effective length of database: 17,147,199,772
effective search space: 4869804735248
effective search space used: 4869804735248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)