Clone Name | rbasdm24 |
---|---|
Clone Library Name | barley_pub |
>HBP1B_WHEAT (P23923) Transcription factor HBP-1b(c38)| Length = 332 Score = 154 bits (390), Expect = 2e-37 Identities = 86/112 (76%), Positives = 87/112 (77%) Frame = -3 Query: 707 KQSSQQAEDALSQGMEALQQSLAETLAXXXXXXXXXXXGNVANYMGQMAMAMGKLGTLEN 528 +QSSQQAEDALSQGMEALQQSLAETLA GNVANYMGQMAMAMGKLGTLEN Sbjct: 221 QQSSQQAEDALSQGMEALQQSLAETLAGSIGSSGSGSTGNVANYMGQMAMAMGKLGTLEN 280 Query: 527 FLRQADNLRQQTLQQMQRILTTRQSARALLVISDYXXXXXXXXXXXXXRPKE 372 FL QADNLRQQTLQQMQRILTTRQSARALLVISDY RPKE Sbjct: 281 FLSQADNLRQQTLQQMQRILTTRQSARALLVISDYSSRLRALSSLWLARPKE 332
>HBP1C_WHEAT (Q41558) Transcription factor HBP-1b(c1) (Fragment)| Length = 476 Score = 144 bits (363), Expect = 3e-34 Identities = 82/112 (73%), Positives = 85/112 (75%) Frame = -3 Query: 707 KQSSQQAEDALSQGMEALQQSLAETLAXXXXXXXXXXXGNVANYMGQMAMAMGKLGTLEN 528 +QSSQQAEDALSQGMEALQQSLAETLA NVA+YMGQMAMAMGKLGTLEN Sbjct: 366 QQSSQQAEDALSQGMEALQQSLAETLASGSLGPAGSSG-NVASYMGQMAMAMGKLGTLEN 424 Query: 527 FLRQADNLRQQTLQQMQRILTTRQSARALLVISDYXXXXXXXXXXXXXRPKE 372 FLRQADNLR QTLQQMQRILTTRQSARALL ISDY RP+E Sbjct: 425 FLRQADNLRLQTLQQMQRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 476
>TGA21_TOBAC (O24160) TGACG-sequence-specific DNA-binding protein TGA-2.1| (TGA2.1) Length = 456 Score = 137 bits (344), Expect = 4e-32 Identities = 77/112 (68%), Positives = 83/112 (74%) Frame = -3 Query: 707 KQSSQQAEDALSQGMEALQQSLAETLAXXXXXXXXXXXGNVANYMGQMAMAMGKLGTLEN 528 +QSS QAEDALSQGMEALQQSLAETLA +VANYMGQMAMAMGKLGTLE Sbjct: 343 QQSSHQAEDALSQGMEALQQSLAETLANGSPAPEGSSG-DVANYMGQMAMAMGKLGTLEG 401 Query: 527 FLRQADNLRQQTLQQMQRILTTRQSARALLVISDYXXXXXXXXXXXXXRPKE 372 FLRQADNLRQQTLQQM R+LTTRQSARALL I++Y RP+E Sbjct: 402 FLRQADNLRQQTLQQMHRVLTTRQSARALLAINEYFSRLRALSSLWLARPRE 453
>TGA2_ARATH (P43273) Transcription factor TGA2 (HBP-1b homolog) (AHBP-1b)| (AtbZIP20) Length = 330 Score = 132 bits (331), Expect = 1e-30 Identities = 73/112 (65%), Positives = 82/112 (73%) Frame = -3 Query: 707 KQSSQQAEDALSQGMEALQQSLAETLAXXXXXXXXXXXGNVANYMGQMAMAMGKLGTLEN 528 +Q+SQQAEDALSQGME+LQQSLA+TL+ NVA+YMGQMAMAMGKLGTLE Sbjct: 221 QQTSQQAEDALSQGMESLQQSLADTLSSGTLGSSSSG--NVASYMGQMAMAMGKLGTLEG 278 Query: 527 FLRQADNLRQQTLQQMQRILTTRQSARALLVISDYXXXXXXXXXXXXXRPKE 372 F+RQADNLR QTLQQM R+LTTRQSARALL I DY RP+E Sbjct: 279 FIRQADNLRLQTLQQMIRVLTTRQSARALLAIHDYFSRLRALSSLWLARPRE 330
>TGA6_ARATH (Q39140) Transcription factor TGA6 (AtbZIP45)| Length = 330 Score = 131 bits (330), Expect = 2e-30 Identities = 72/114 (63%), Positives = 83/114 (72%) Frame = -3 Query: 713 TFKQSSQQAEDALSQGMEALQQSLAETLAXXXXXXXXXXXGNVANYMGQMAMAMGKLGTL 534 + +Q+SQQAEDALSQGME+LQQSLA+TL+ NVA+YMGQMAMAMG+LGTL Sbjct: 219 SLQQTSQQAEDALSQGMESLQQSLADTLSSGTLGSSSSD--NVASYMGQMAMAMGQLGTL 276 Query: 533 ENFLRQADNLRQQTLQQMQRILTTRQSARALLVISDYXXXXXXXXXXXXXRPKE 372 E F+RQADNLR QTLQQM R+LTTRQSARALL I DY RP+E Sbjct: 277 EGFIRQADNLRLQTLQQMLRVLTTRQSARALLAIHDYSSRLRALSSLWLARPRE 330
>TGA5_ARATH (Q39163) Transcription factor TGA5 (Ocs element-binding factor 5)| (OBF5) (AtbZIP26) Length = 330 Score = 126 bits (317), Expect = 6e-29 Identities = 70/112 (62%), Positives = 80/112 (71%) Frame = -3 Query: 707 KQSSQQAEDALSQGMEALQQSLAETLAXXXXXXXXXXXGNVANYMGQMAMAMGKLGTLEN 528 +QSSQQAEDALSQGM+ LQQSLA+TL+ NVA+YMGQMAMAMGKLGTLE Sbjct: 221 QQSSQQAEDALSQGMDNLQQSLADTLSSGTLGSSSSG--NVASYMGQMAMAMGKLGTLEG 278 Query: 527 FLRQADNLRQQTLQQMQRILTTRQSARALLVISDYXXXXXXXXXXXXXRPKE 372 F+RQADNLR QT QQM R+LTTRQSARALL + +Y RP+E Sbjct: 279 FIRQADNLRLQTYQQMVRLLTTRQSARALLAVHNYTLRLRALSSLWLARPRE 330
>TGA7_ARATH (Q93ZE2) Transcription factor TGA7 (AtbZIP50)| Length = 368 Score = 93.6 bits (231), Expect = 5e-19 Identities = 55/112 (49%), Positives = 68/112 (60%) Frame = -3 Query: 707 KQSSQQAEDALSQGMEALQQSLAETLAXXXXXXXXXXXGNVANYMGQMAMAMGKLGTLEN 528 +QSSQQAEDALSQG++ LQQSLAE++ +Y MA A+ L LE Sbjct: 262 QQSSQQAEDALSQGIDKLQQSLAESIVIDAVIEST-------HYPTHMAAAIENLQALEG 314 Query: 527 FLRQADNLRQQTLQQMQRILTTRQSARALLVISDYXXXXXXXXXXXXXRPKE 372 F+ QAD+LRQQTLQQM +ILTTRQSAR LL + +Y RP+E Sbjct: 315 FVNQADHLRQQTLQQMAKILTTRQSARGLLALGEYLHRLRALSSLWAARPQE 366
>TGA3_ARATH (Q39234) Transcription factor TGA3 (AtbZIP22)| Length = 384 Score = 92.0 bits (227), Expect = 2e-18 Identities = 53/112 (47%), Positives = 68/112 (60%) Frame = -3 Query: 707 KQSSQQAEDALSQGMEALQQSLAETLAXXXXXXXXXXXGNVANYMGQMAMAMGKLGTLEN 528 +QSSQQAE+ALSQG++ LQQ L E++A N+ MA AM L LE+ Sbjct: 277 QQSSQQAEEALSQGLDKLQQGLVESIAIQIKVVES------VNHGAPMASAMENLQALES 330 Query: 527 FLRQADNLRQQTLQQMQRILTTRQSARALLVISDYXXXXXXXXXXXXXRPKE 372 F+ QAD+LRQQTLQQM +ILTTRQ+AR LL + +Y RP+E Sbjct: 331 FVNQADHLRQQTLQQMSKILTTRQAARGLLALGEYFHRLRALSSLWAARPRE 382
>TGA4_ARATH (Q39162) Transcription factor TGA4 (Ocs element-binding factor 4)| (OBF4) (AtbZIP57) Length = 364 Score = 90.1 bits (222), Expect = 6e-18 Identities = 50/95 (52%), Positives = 64/95 (67%) Frame = -3 Query: 707 KQSSQQAEDALSQGMEALQQSLAETLAXXXXXXXXXXXGNVANYMGQMAMAMGKLGTLEN 528 +QS QQAEDALSQGME LQ +LAE++A +Y+ QM AM +L L + Sbjct: 259 RQSCQQAEDALSQGMEKLQHTLAESVAAGKLGE--------GSYIPQMTCAMERLEALVS 310 Query: 527 FLRQADNLRQQTLQQMQRILTTRQSARALLVISDY 423 F+ QAD+LR +TLQQM RILTTRQ+AR LL + +Y Sbjct: 311 FVNQADHLRHETLQQMHRILTTRQAARGLLALGEY 345
>TGA1_ARATH (Q39237) Transcription factor TGA1 (DNA-binding protein TGA1a-like| protein) (AtbZIP47) Length = 368 Score = 85.9 bits (211), Expect = 1e-16 Identities = 48/95 (50%), Positives = 63/95 (66%) Frame = -3 Query: 707 KQSSQQAEDALSQGMEALQQSLAETLAXXXXXXXXXXXGNVANYMGQMAMAMGKLGTLEN 528 KQS QQAEDAL+QGME LQ +LA+ +A +Y+ Q+ AM +L L + Sbjct: 263 KQSCQQAEDALTQGMEKLQHTLADCVAAGQLGE--------GSYIPQVNSAMDRLEALVS 314 Query: 527 FLRQADNLRQQTLQQMQRILTTRQSARALLVISDY 423 F+ QAD+LR +TLQQM RILTTRQ+AR LL + +Y Sbjct: 315 FVNQADHLRHETLQQMYRILTTRQAARGLLALGEY 349
>TGA1A_TOBAC (P14232) TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a)| (ASF-1 protein) Length = 359 Score = 76.6 bits (187), Expect = 7e-14 Identities = 48/95 (50%), Positives = 58/95 (61%), Gaps = 1/95 (1%) Frame = -3 Query: 704 QSSQQAEDALSQGMEALQQSLAETLAXXXXXXXXXXXGNVANY-MGQMAMAMGKLGTLEN 528 QS QQAEDALSQGM L Q LAE +A NY + QM A+ KL L Sbjct: 254 QSCQQAEDALSQGMVKLHQILAEAVAAGRLGE--------GNYTLPQMGPAIEKLEDLVR 305 Query: 527 FLRQADNLRQQTLQQMQRILTTRQSARALLVISDY 423 F+ QAD+LRQ+TLQQM RIL T Q+A+ LL + +Y Sbjct: 306 FVNQADHLRQETLQQMSRILNTCQAAQGLLALGEY 340 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,480,823 Number of Sequences: 219361 Number of extensions: 2014841 Number of successful extensions: 5184 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 5009 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5168 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7366267610 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)