ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasdm22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196093.1| Oryza sativa (japonica cultivar-group) putative clathrin assembly protein (OSJNBa0083M08.3), mRNA Length = 622 Score = 311 bits (157), Expect = 1e-81 Identities = 211/229 (92%) Strand = Plus / Minus Query: 225 ctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctatagacgacctt 284 |||||||||||| |||||||| ||||||||||||||||||||||||| || || ||||| Sbjct: 241 ctcatcgttgtcgacgccgactaggaagaagagggaggcgtagcgccggtacaccacctt 182 Query: 285 gtagttacggtgctccacgaaagagcactgctggtcagtgcgggcgaggcacttgcggat 344 |||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 181 gtagttgcggtgctccacgaaagaacactggtggtcggtgcgggcgaggcacttgcggac 122 Query: 345 gatctcgccctcaagggcgcggcgctcgtcgagggagaggtgctcgtagcactgcgccag 404 |||||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||| Sbjct: 121 gatctcgccctcgagggcgcggcgctcgtcgacggagaggtgctcgtagtattgcgccac 62 Query: 405 ccgcgtctgcccctgcttgttcaccagcagcacgaaccggatccccatc 453 |||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 61 ccgcgtctgcccctgcttgttcaccatcaccacgaaccggatccccatc 13
>dbj|AK120131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026P11, full insert sequence Length = 761 Score = 303 bits (153), Expect = 3e-79 Identities = 210/229 (91%) Strand = Plus / Minus Query: 225 ctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctatagacgacctt 284 |||||||||||| |||||||| ||||||||||||||||||||||||| || || ||||| Sbjct: 280 ctcatcgttgtcgacgccgactaggaagaagagggaggcgtagcgccggtacaccacctt 221 Query: 285 gtagttacggtgctccacgaaagagcactgctggtcagtgcgggcgaggcacttgcggat 344 |||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 220 gtagttgcggtgctccacgaaagaacactggtggtcggtgcgggcgaggcacttgcggac 161 Query: 345 gatctcgccctcaagggcgcggcgctcgtcgagggagaggtgctcgtagcactgcgccag 404 |||||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||| Sbjct: 160 gatctcgccctcgagggcgcggcgctcgtcgacggagaggtgctcgtagtattgcgccac 101 Query: 405 ccgcgtctgcccctgcttgttcaccagcagcacgaaccggatccccatc 453 |||||||||||||||||||||||||| || |||||||||| |||||||| Sbjct: 100 ccgcgtctgcccctgcttgttcaccatcaccacgaaccgggtccccatc 52
>ref|XM_482218.1| Oryza sativa (japonica cultivar-group), mRNA Length = 432 Score = 301 bits (152), Expect = 1e-78 Identities = 206/224 (91%) Strand = Plus / Minus Query: 229 tcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctatagacgaccttgtag 288 |||||||| ||||||||||||||||||||||| ||||| |||| || || ||||||||| Sbjct: 224 tcgttgtcgacgccgacgaggaagaagagggaagcgtaccgccggtacaccaccttgtag 165 Query: 289 ttacggtgctccacgaaagagcactgctggtcagtgcgggcgaggcacttgcggatgatc 348 || |||||||||||||| || ||||||||||| |||||||||||||||||||||| |||| Sbjct: 164 ttccggtgctccacgaacgaacactgctggtcggtgcgggcgaggcacttgcggacgatc 105 Query: 349 tcgccctcaagggcgcggcgctcgtcgagggagaggtgctcgtagcactgcgccagccgc 408 |||||||| ||||||||||||||||||| |||||||||||||||| |||| ||||||||| Sbjct: 104 tcgccctcgagggcgcggcgctcgtcgatggagaggtgctcgtagtactgggccagccgc 45 Query: 409 gtctgcccctgcttgttcaccagcagcacgaaccggatccccat 452 |||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 44 gtctgcccctgcttgttcacgaacagcacgaaccggatccccat 1
>gb|AY105951.1| Zea mays PCO080381 mRNA sequence Length = 826 Score = 299 bits (151), Expect = 5e-78 Identities = 205/223 (91%) Strand = Plus / Minus Query: 225 ctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctatagacgacctt 284 ||||||| |||| ||||||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 346 ctcatcgctgtcgacgccgacgaggaagaaaagggaggcgtagcgcctgtaaacgacctt 287 Query: 285 gtagttacggtgctccacgaaagagcactgctggtcagtgcgggcgaggcacttgcggat 344 |||||| ||||||||||| || || |||||||||||||||||||||||||||||||||| Sbjct: 286 gtagttccggtgctccacaaacgaacactgctggtcagtgcgggcgaggcacttgcggac 227 Query: 345 gatctcgccctcaagggcgcggcgctcgtcgagggagaggtgctcgtagcactgcgccag 404 |||||||||||| ||||| || ||||||||||||||||||||||||||| |||||||||| Sbjct: 226 gatctcgccctcgagggcccgtcgctcgtcgagggagaggtgctcgtagtactgcgccag 167 Query: 405 ccgcgtctgcccctgcttgttcaccagcagcacgaaccggatc 447 ||||||||| ||||||||||| || | |||||||||||||||| Sbjct: 166 ccgcgtctggccctgcttgttgacgaacagcacgaaccggatc 124
>gb|BT017687.1| Zea mays clone EL01N0444B12.c mRNA sequence Length = 566 Score = 242 bits (122), Expect = 1e-60 Identities = 167/182 (91%) Strand = Plus / Minus Query: 225 ctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctatagacgacctt 284 ||||||| |||| |||||||| |||||||| ||||||||||||||||| || |||||||| Sbjct: 190 ctcatcgctgtcgacgccgacaaggaagaaaagggaggcgtagcgcctgtaaacgacctt 131 Query: 285 gtagttacggtgctccacgaaagagcactgctggtcagtgcgggcgaggcacttgcggat 344 |||||| ||||||||||| || || |||||||||||||||||||||||||||||||||| Sbjct: 130 gtagttccggtgctccacaaacgaacactgctggtcagtgcgggcgaggcacttgcggac 71 Query: 345 gatctcgccctcaagggcgcggcgctcgtcgagggagaggtgctcgtagcactgcgccag 404 |||||||||||| ||||| || ||||||||||||||||||||||||||| |||||||||| Sbjct: 70 gatctcgccctcgagggcccgtcgctcgtcgagggagaggtgctcgtagtactgcgccag 11 Query: 405 cc 406 || Sbjct: 10 cc 9
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 218 bits (110), Expect = 2e-53 Identities = 134/142 (94%) Strand = Plus / Minus Query: 312 ctgctggtcagtgcgggcgaggcacttgcggatgatctcgccctcaagggcgcggcgctc 371 ||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 18751523 ctgctggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctc 18751464 Query: 372 gtcgagggagaggtgctcgtagcactgcgccagccgcgtctgcccctgcttgttcaccag 431 ||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| | Sbjct: 18751463 gtcgatggagaggtgctcgtagtactgggccagccgcgtctgcccctgcttgttcacgaa 18751404 Query: 432 cagcacgaaccggatccccatc 453 |||||||||||||||||||||| Sbjct: 18751403 cagcacgaaccggatccccatc 18751382 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 224 cctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctatagacgacct 283 ||||||||||||| ||||||||||||||||||||||| ||||| |||| || || |||| Sbjct: 18772803 cctcatcgttgtcgacgccgacgaggaagaagagggaagcgtaccgccggtacaccacct 18772744 Query: 284 tgtagttacggtgctccacgaaagagcactgc 315 ||||||| |||||||||||||| || |||||| Sbjct: 18772743 tgtagttccggtgctccacgaacgaacactgc 18772712 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 224 cctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctatagacgacct 283 |||| |||||||| ||||||||||||||||||||||| ||||| |||| || || |||| Sbjct: 18751826 cctcgtcgttgtcgacgccgacgaggaagaagagggaagcgtaccgccggtacaccacct 18751767 Query: 284 tgtagttacggtgctccacgaaagagcactgc 315 ||||||| |||||||||||||| || |||||| Sbjct: 18751766 tgtagttccggtgctccacgaacgaacactgc 18751735
>dbj|AP003880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1123_G08 Length = 146944 Score = 218 bits (110), Expect = 2e-53 Identities = 134/142 (94%) Strand = Plus / Minus Query: 312 ctgctggtcagtgcgggcgaggcacttgcggatgatctcgccctcaagggcgcggcgctc 371 ||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct: 54972 ctgctggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctc 54913 Query: 372 gtcgagggagaggtgctcgtagcactgcgccagccgcgtctgcccctgcttgttcaccag 431 ||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| | Sbjct: 54912 gtcgatggagaggtgctcgtagtactgggccagccgcgtctgcccctgcttgttcacgaa 54853 Query: 432 cagcacgaaccggatccccatc 453 |||||||||||||||||||||| Sbjct: 54852 cagcacgaaccggatccccatc 54831 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 224 cctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctatagacgacct 283 ||||||||||||| ||||||||||||||||||||||| ||||| |||| || || |||| Sbjct: 76252 cctcatcgttgtcgacgccgacgaggaagaagagggaagcgtaccgccggtacaccacct 76193 Query: 284 tgtagttacggtgctccacgaaagagcactgc 315 ||||||| |||||||||||||| || |||||| Sbjct: 76192 tgtagttccggtgctccacgaacgaacactgc 76161 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 224 cctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctatagacgacct 283 |||| |||||||| ||||||||||||||||||||||| ||||| |||| || || |||| Sbjct: 55275 cctcgtcgttgtcgacgccgacgaggaagaagagggaagcgtaccgccggtacaccacct 55216 Query: 284 tgtagttacggtgctccacgaaagagcactgc 315 ||||||| |||||||||||||| || |||||| Sbjct: 55215 tgtagttccggtgctccacgaacgaacactgc 55184
>gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 genomic sequence, complete sequence Length = 106110 Score = 202 bits (102), Expect = 9e-49 Identities = 129/138 (93%) Strand = Plus / Minus Query: 316 tggtcagtgcgggcgaggcacttgcggatgatctcgccctcaagggcgcggcgctcgtcg 375 ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 38086 tggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcg 38027 Query: 376 agggagaggtgctcgtagcactgcgccagccgcgtctgcccctgcttgttcaccagcagc 435 | |||||||||||||||| | ||||||| |||||||||||||||||||||||||| || | Sbjct: 38026 acggagaggtgctcgtagtattgcgccacccgcgtctgcccctgcttgttcaccatcacc 37967 Query: 436 acgaaccggatccccatc 453 |||||||||||||||||| Sbjct: 37966 acgaaccggatccccatc 37949 Score = 119 bits (60), Expect = 1e-23 Identities = 84/92 (91%) Strand = Plus / Minus Query: 224 cctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctatagacgacct 283 ||||||||||||| |||||||| ||||||||||||||||||||||||| || || |||| Sbjct: 38312 cctcatcgttgtcgacgccgactaggaagaagagggaggcgtagcgccggtacaccacct 38253 Query: 284 tgtagttacggtgctccacgaaagagcactgc 315 ||||||| ||||||||||||||||| |||||| Sbjct: 38252 tgtagttgcggtgctccacgaaagaacactgc 38221
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 202 bits (102), Expect = 9e-49 Identities = 129/138 (93%) Strand = Plus / Plus Query: 316 tggtcagtgcgggcgaggcacttgcggatgatctcgccctcaagggcgcggcgctcgtcg 375 ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 11030150 tggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcg 11030209 Query: 376 agggagaggtgctcgtagcactgcgccagccgcgtctgcccctgcttgttcaccagcagc 435 | |||||||||||||||| | ||||||| |||||||||||||||||||||||||| || | Sbjct: 11030210 acggagaggtgctcgtagtattgcgccacccgcgtctgcccctgcttgttcaccatcacc 11030269 Query: 436 acgaaccggatccccatc 453 |||||||||||||||||| Sbjct: 11030270 acgaaccggatccccatc 11030287 Score = 119 bits (60), Expect = 1e-23 Identities = 84/92 (91%) Strand = Plus / Plus Query: 224 cctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctatagacgacct 283 ||||||||||||| |||||||| ||||||||||||||||||||||||| || || |||| Sbjct: 11029924 cctcatcgttgtcgacgccgactaggaagaagagggaggcgtagcgccggtacaccacct 11029983 Query: 284 tgtagttacggtgctccacgaaagagcactgc 315 ||||||| ||||||||||||||||| |||||| Sbjct: 11029984 tgtagttgcggtgctccacgaaagaacactgc 11030015
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 202 bits (102), Expect = 9e-49 Identities = 129/138 (93%) Strand = Plus / Plus Query: 316 tggtcagtgcgggcgaggcacttgcggatgatctcgccctcaagggcgcggcgctcgtcg 375 ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 11036590 tggtcggtgcgggcgaggcacttgcggacgatctcgccctcgagggcgcggcgctcgtcg 11036649 Query: 376 agggagaggtgctcgtagcactgcgccagccgcgtctgcccctgcttgttcaccagcagc 435 | |||||||||||||||| | ||||||| |||||||||||||||||||||||||| || | Sbjct: 11036650 acggagaggtgctcgtagtattgcgccacccgcgtctgcccctgcttgttcaccatcacc 11036709 Query: 436 acgaaccggatccccatc 453 |||||||||||||||||| Sbjct: 11036710 acgaaccggatccccatc 11036727 Score = 119 bits (60), Expect = 1e-23 Identities = 84/92 (91%) Strand = Plus / Plus Query: 224 cctcatcgttgtccacgccgacgaggaagaagagggaggcgtagcgcctatagacgacct 283 ||||||||||||| |||||||| ||||||||||||||||||||||||| || || |||| Sbjct: 11036364 cctcatcgttgtcgacgccgactaggaagaagagggaggcgtagcgccggtacaccacct 11036423 Query: 284 tgtagttacggtgctccacgaaagagcactgc 315 ||||||| ||||||||||||||||| |||||| Sbjct: 11036424 tgtagttgcggtgctccacgaaagaacactgc 11036455
>ref|NM_127537.2| Arabidopsis thaliana unknown protein AT2G19790 mRNA, complete cds Length = 631 Score = 52.0 bits (26), Expect = 0.002 Identities = 143/182 (78%) Strand = Plus / Minus Query: 249 gaagaagagggaggcgtagcgcctatagacgaccttgtagttacggtgctccacgaaaga 308 ||||||||| || ||||| ||||| ||||| | ||||||||| || ||||| || || || Sbjct: 275 gaagaagagagatgcgtaacgcctgtagactatcttgtagttgcgatgctcgacaaacga 216 Query: 309 gcactgctggtcagtgcgggcgaggcacttgcggatgatctcgccctcaagggcgcggcg 368 ||||| ||||| |||| |||||||| || |||| ||| ||||| || || ||||| || Sbjct: 215 acactgttggtcgttgcgagcgaggcatttacggacgatttcgccttcgagagcgcgacg 156 Query: 369 ctcgtcgagggagaggtgctcgtagcactgcgccagccgcgtctgcccctgcttgttcac 428 || ||||| | ||| |||||| |||| || || || ||||| || ||||||||||| Sbjct: 155 ttcctcgagagtgagccattcgtagtactgagcaagacgagtctggccttgcttgttcac 96 Query: 429 ca 430 || Sbjct: 95 ca 94
>gb|AY059143.1| Arabidopsis thaliana putative clathrin assembly protein (At2g19790) mRNA, complete cds Length = 463 Score = 52.0 bits (26), Expect = 0.002 Identities = 143/182 (78%) Strand = Plus / Minus Query: 249 gaagaagagggaggcgtagcgcctatagacgaccttgtagttacggtgctccacgaaaga 308 ||||||||| || ||||| ||||| ||||| | ||||||||| || ||||| || || || Sbjct: 204 gaagaagagagatgcgtaacgcctgtagactatcttgtagttgcgatgctcgacaaacga 145 Query: 309 gcactgctggtcagtgcgggcgaggcacttgcggatgatctcgccctcaagggcgcggcg 368 ||||| ||||| |||| |||||||| || |||| ||| ||||| || || ||||| || Sbjct: 144 acactgttggtcgttgcgagcgaggcatttacggacgatttcgccttcgagagcgcgacg 85 Query: 369 ctcgtcgagggagaggtgctcgtagcactgcgccagccgcgtctgcccctgcttgttcac 428 || ||||| | ||| |||||| |||| || || || ||||| || ||||||||||| Sbjct: 84 ttcctcgagagtgagccattcgtagtactgagcaagacgagtctggccttgcttgttcac 25 Query: 429 ca 430 || Sbjct: 24 ca 23
>gb|AF370185.1| Arabidopsis thaliana putative clathrin assembly protein (At2g19790) mRNA, complete cds Length = 645 Score = 52.0 bits (26), Expect = 0.002 Identities = 143/182 (78%) Strand = Plus / Minus Query: 249 gaagaagagggaggcgtagcgcctatagacgaccttgtagttacggtgctccacgaaaga 308 ||||||||| || ||||| ||||| ||||| | ||||||||| || ||||| || || || Sbjct: 273 gaagaagagagatgcgtaacgcctgtagactatcttgtagttgcgatgctcgacaaacga 214 Query: 309 gcactgctggtcagtgcgggcgaggcacttgcggatgatctcgccctcaagggcgcggcg 368 ||||| ||||| |||| |||||||| || |||| ||| ||||| || || ||||| || Sbjct: 213 acactgttggtcgttgcgagcgaggcatttacggacgatttcgccttcgagagcgcgacg 154 Query: 369 ctcgtcgagggagaggtgctcgtagcactgcgccagccgcgtctgcccctgcttgttcac 428 || ||||| | ||| |||||| |||| || || || ||||| || ||||||||||| Sbjct: 153 ttcctcgagagtgagccattcgtagtactgagcaagacgagtctggccttgcttgttcac 94 Query: 429 ca 430 || Sbjct: 93 ca 92
>gb|AY088273.1| Arabidopsis thaliana clone 5064 mRNA, complete sequence Length = 629 Score = 52.0 bits (26), Expect = 0.002 Identities = 143/182 (78%) Strand = Plus / Minus Query: 249 gaagaagagggaggcgtagcgcctatagacgaccttgtagttacggtgctccacgaaaga 308 ||||||||| || ||||| ||||| ||||| | ||||||||| || ||||| || || || Sbjct: 275 gaagaagagagatgcgtaacgcctgtagactatcttgtagttgcgatgctcgacaaacga 216 Query: 309 gcactgctggtcagtgcgggcgaggcacttgcggatgatctcgccctcaagggcgcggcg 368 ||||| ||||| |||| |||||||| || |||| ||| ||||| || || ||||| || Sbjct: 215 acactgttggtcgttgcgagcgaggcatttacggacgatttcgccttcgagagcgcgacg 156 Query: 369 ctcgtcgagggagaggtgctcgtagcactgcgccagccgcgtctgcccctgcttgttcac 428 || ||||| | ||| |||||| |||| || || || ||||| || ||||||||||| Sbjct: 155 ttcctcgagagtgagccattcgtagtactgagcaagacgagtctggccttgcttgttcac 96 Query: 429 ca 430 || Sbjct: 95 ca 94
>emb|AL928661.10| Mouse DNA sequence from clone RP23-3E2 on chromosome 4, complete sequence Length = 221208 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctcgccctcccctt 490 ||||||||||||| ||||||| |||||||||| Sbjct: 104795 cccctccccttccctcctctccccctcccctt 104764 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctcgccctcccctt 490 ||||||||||||| ||||||| |||||||||| Sbjct: 104774 cccctccccttccctcctctccccctcccctt 104743
>gb|AC161534.5| Mus musculus chromosome 1, clone RP24-127D13, complete sequence Length = 137652 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 470 ccttcctctcgccctcccctttc 492 ||||||||||||||||||||||| Sbjct: 48655 ccttcctctcgccctcccctttc 48633
>gb|AC115722.12| Mus musculus chromosome 5, clone RP23-16N23, complete sequence Length = 194380 Score = 46.1 bits (23), Expect = 0.12 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctcgccctcccct 489 ||||||||||||||||||||| ||||||||| Sbjct: 186921 cccctccccttccttcctctc-ccctcccct 186950
>gb|AC114605.11| Mus musculus chromosome 5, clone RP23-373H20, complete sequence Length = 163969 Score = 46.1 bits (23), Expect = 0.12 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctcgccctcccct 489 ||||||||||||||||||||| ||||||||| Sbjct: 17885 cccctccccttccttcctctc-ccctcccct 17914
>gb|AC162389.6| Mus musculus 6 BAC RP24-114M8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 189477 Score = 46.1 bits (23), Expect = 0.12 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctcgccctcccct 489 ||||||||||||||||||||| ||||||||| Sbjct: 88134 cccctccccttccttcctctc-ccctcccct 88105
>ref|XM_867027.1| PREDICTED: Bos taurus similar to Histamine H3 receptor (HH3R) (G-protein coupled receptor 97) (LOC615267), mRNA Length = 2334 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 464 ccccttccttcctctcgccctcccctttcg 493 |||||||||||||||||||| ||| ||||| Sbjct: 82 ccccttccttcctctcgcccacccttttcg 53
>emb|AL683807.22| Human DNA sequence from clone RP13-297E16 on chromosome X Contains the DXYS155E gene for DNA segment on chromosome X and Y (unique) 155 expressed sequence (XE7, XE7Y), the ASMT gene for acetylserotonin O-methyltransferase (ASMTY, HIOMT, HIOMTY), three novel genes and three CpG islands, complete sequence Length = 189825 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctcgccctcccctttc 492 |||||||||| |||||| ||| |||||||||||| Sbjct: 6306 cccctcccctcccttcccctccccctcccctttc 6339
>gb|BT009976.1| Drosophila melanogaster RE55648 full insert cDNA Length = 4772 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 tagtttcaatacaacccatgtt 101 |||||||||||||||||||||| Sbjct: 3766 tagtttcaatacaacccatgtt 3787
>emb|AL139382.12| Human DNA sequence from clone RP11-86N24 on chromosome 13 Contains the TNFSF11 gene for tumor necrosis factor (ligand) superfamily, member 11 and a CpG island, complete sequence Length = 200724 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 462 ctccccttccttcctctcgccctccc 487 ||||||||||||||| |||||||||| Sbjct: 125605 ctccccttccttcctttcgccctccc 125630
>gb|AF544022.1| Homo sapiens RANKL gene, promoter region Length = 1974 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 462 ctccccttccttcctctcgccctccc 487 ||||||||||||||| |||||||||| Sbjct: 1685 ctccccttccttcctttcgccctccc 1660
>emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue Length = 2682 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 187 atggagaagagcatgcaggtgcagaacctgtcggacgc 224 |||||||||| |||||||| |||| |||||||||||| Sbjct: 2088 atggagaagatcatgcaggcacagaccctgtcggacgc 2125 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ctgatgcaatacctcatgga 184 |||||||||||||||||||| Sbjct: 1854 ctgatgcaatacctcatgga 1873
>gb|AF375970.1| Sphenodon punctatus serum amyloid A mRNA, complete cds Length = 533 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 190 gagaagagcatgcaggtgcagaacct 215 |||||||||||||||||| ||||||| Sbjct: 77 gagaagagcatgcaggtgaagaacct 52
>gb|AC083841.9| Homo sapiens chromosome 8, clone RP11-706C16, complete sequence Length = 203375 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 460 ccctccccttccttcctctcgccctc 485 |||||||||||||||||||| ||||| Sbjct: 137011 ccctccccttccttcctctctccctc 137036
>gb|AC093049.1| Drosophila melanogaster, chromosome 2R, region 45A-45A, BAC clone BACR08E17, complete sequence Length = 178262 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 tagtttcaatacaacccatgtt 101 |||||||||||||||||||||| Sbjct: 160539 tagtttcaatacaacccatgtt 160518
>gb|AF333234.1|AF333234 Homo sapiens receptor activator of nuclear factor kappa B ligand (RANKL) gene, promoter region Length = 4255 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 462 ctccccttccttcctctcgccctccc 487 ||||||||||||||| |||||||||| Sbjct: 4006 ctccccttccttcctttcgccctccc 3981
>gb|AC007471.4|AC007471 Drosophila melanogaster, chromosome 2R, region 44F-45A, BAC clone BACR02C23, complete sequence Length = 168601 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 tagtttcaatacaacccatgtt 101 |||||||||||||||||||||| Sbjct: 154869 tagtttcaatacaacccatgtt 154890
>gb|AC158675.4| Mus musculus 6 BAC RP23-180J21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226948 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 43 tttcatccacatgcatacaaag 64 |||||||||||||||||||||| Sbjct: 173856 tttcatccacatgcatacaaag 173835
>gb|AE003835.4| Drosophila melanogaster chromosome 2R, section 15 of 73 of the complete sequence Length = 271696 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 tagtttcaatacaacccatgtt 101 |||||||||||||||||||||| Sbjct: 167989 tagtttcaatacaacccatgtt 168010
>gb|AC006074.1|AC006074 Drosophila melanogaster, chromosome 2R, region 44F12-45A4, P1 clones DS05998, DS07727, DS05175, and DS01885, complete sequence Length = 204617 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 tagtttcaatacaacccatgtt 101 |||||||||||||||||||||| Sbjct: 152360 tagtttcaatacaacccatgtt 152339
>gb|AC167976.4| Mus musculus BAC clone RP23-167L5 from chromosome 3, complete sequence Length = 211791 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctcgccctccc 487 ||||||||||||| ||||||| ||||||| Sbjct: 5902 cccctccccttccctcctctccccctccc 5874
>gb|AC165225.5| Mus musculus chromosome 3, clone RP24-70J13, complete sequence Length = 205069 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctc 479 ||||||||||||||||||||| Sbjct: 77125 cccctccccttccttcctctc 77105
>gb|AC139755.3| Mus musculus BAC clone RP24-96N20 from chromosome 6, complete sequence Length = 192869 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 463 tccccttccttcctctcgccc 483 ||||||||||||||||||||| Sbjct: 80107 tccccttccttcctctcgccc 80087
>gb|AC123747.26| Mus musculus chromosome 3, clone RP24-123I12, complete sequence Length = 188946 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctcgccctccc 487 ||||||||||||| ||||||| ||||||| Sbjct: 77859 cccctccccttccctcctctccccctccc 77887
>gb|AC123507.4| Rattus norvegicus 11 BAC CH230-18C5 (Children's Hospital Oakland Research Institute) complete sequence Length = 166073 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 ttccttcctctcgccctcccctttc 492 |||||||||||| |||||||||||| Sbjct: 35652 ttccttcctctctccctcccctttc 35628
>ref|NM_011941.2| Mus musculus mitogen activated protein kinase binding protein 1 (Mapkbp1), mRNA Length = 6943 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 gacgaggaagaagagggaggc 263 ||||||||||||||||||||| Sbjct: 3465 gacgaggaagaagagggaggc 3485
>gb|AC121119.12| Mus musculus chromosome 1, clone RP23-395D10, complete sequence Length = 221436 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctc 479 ||||||||||||||||||||| Sbjct: 70833 cccctccccttccttcctctc 70813
>gb|AC120411.9| Mus musculus chromosome 6, clone RP24-447O2, complete sequence Length = 202938 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 452 tctctcgcccctccccttccttcct 476 |||||| |||||||||||||||||| Sbjct: 157622 tctctctcccctccccttccttcct 157598
>gb|AC160529.6| Mus musculus chromosome 1, clone RP24-141F19, complete sequence Length = 167687 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctc 479 ||||||||||||||||||||| Sbjct: 34380 cccctccccttccttcctctc 34400 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 462 ctccccttccttcctctcgccctcccctttc 492 ||||||||||||||||| |||||||||||| Sbjct: 34438 ctccccttccttcctct--ccctcccctttc 34466
>gb|AC157545.12| Mus musculus chromosome 1, clone RP23-317L18, complete sequence Length = 197367 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctcgccctccc 487 |||||||||||| |||||||| ||||||| Sbjct: 100283 cccctccccttctttcctctccccctccc 100311
>gb|BC011271.1| Mus musculus mitogen activated protein kinase binding protein 1, mRNA (cDNA clone IMAGE:3710689), partial cds Length = 4060 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 gacgaggaagaagagggaggc 263 ||||||||||||||||||||| Sbjct: 595 gacgaggaagaagagggaggc 615
>gb|AC004963.2| Homo sapiens PAC clone RP5-1102A12 from 7, complete sequence Length = 173627 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctc 479 ||||||||||||||||||||| Sbjct: 98136 cccctccccttccttcctctc 98116
>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence Length = 264425 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctc 479 ||||||||||||||||||||| Sbjct: 39827 cccctccccttccttcctctc 39847 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctc 479 ||||||||||||||||||||| Sbjct: 39787 cccctccccttccttcctctc 39807 Score = 42.1 bits (21), Expect = 1.9 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 462 ctccccttccttcctctcgccctcccctt 490 |||||||||||||||||| |||||||||| Sbjct: 39770 ctccccttccttcctctc-ccctcccctt 39797 Score = 40.1 bits (20), Expect = 7.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctcgccctcccctt 490 ||||||| ||||||||||||| |||||||||| Sbjct: 39807 cccctcctcttccttcctctc-ccctcccctt 39837
>gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, complete sequence Length = 211521 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctc 479 ||||||||||||||||||||| Sbjct: 119287 cccctccccttccttcctctc 119307 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctc 479 ||||||||||||||||||||| Sbjct: 119247 cccctccccttccttcctctc 119267 Score = 42.1 bits (21), Expect = 1.9 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 462 ctccccttccttcctctcgccctcccctt 490 |||||||||||||||||| |||||||||| Sbjct: 119230 ctccccttccttcctctc-ccctcccctt 119257 Score = 40.1 bits (20), Expect = 7.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctcgccctcccctt 490 ||||||| ||||||||||||| |||||||||| Sbjct: 119267 cccctcctcttccttcctctc-ccctcccctt 119297
>gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, complete sequence Length = 141653 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 452 tctctcgcccctccccttccttcct 476 |||||| |||||||||||||||||| Sbjct: 42058 tctctctcccctccccttccttcct 42034
>ref|NM_001003826.1| Danio rerio adaptor-related protein complex 4, sigma 1 subunit (ap4s1), mRNA Length = 423 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 gtctgcccctgcttgttcaccagcagcacgaac 441 ||||||||||| |||||||||| ||||| |||| Sbjct: 41 gtctgcccctgtttgttcaccatcagcaggaac 9
>gb|BC114244.1| Danio rerio adaptor-related protein complex 4, sigma 1 subunit, mRNA (cDNA clone MGC:136677 IMAGE:8004037), complete cds Length = 662 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 gtctgcccctgcttgttcaccagcagcacgaac 441 ||||||||||| |||||||||| ||||| |||| Sbjct: 167 gtctgcccctgtttgttcaccatcagcaggaac 135
>gb|AC109542.6| Rattus norvegicus 1 BAC CH230-270O15 (Children's Hospital Oakland Research Institute) complete sequence Length = 246913 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctc 479 ||||||||||||||||||||| Sbjct: 72309 cccctccccttccttcctctc 72289
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 cgctcgtcgagggagaggtgc 387 ||||||||||||||||||||| Sbjct: 222294 cgctcgtcgagggagaggtgc 222314
>gb|BC070449.1| Mus musculus mitogen activated protein kinase binding protein 1, mRNA (cDNA clone MGC:91383 IMAGE:30543913), complete cds Length = 6943 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 gacgaggaagaagagggaggc 263 ||||||||||||||||||||| Sbjct: 3465 gacgaggaagaagagggaggc 3485
>emb|AL596026.13| Zebrafish DNA sequence from clone BUSM1-234G15 in linkage group 17 Contains the sly1 gene for suppressor of ypt1, a novel gene similar to AP4 (adaptor-related protein complex 4, sigma subunit), the 3' part of the strn3 gene for striatin, calmodulin binding protein 3, a novel gene similar to COCH (coagulation factor C homolog, cochlin), a gene for a novel 7 transmembrane receptor (rhodopsin family) and a novel gene similar to KIAA1333, complete sequence Length = 127993 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 gtctgcccctgcttgttcaccagcagcacgaac 441 ||||||||||| |||||||||| ||||| |||| Sbjct: 126526 gtctgcccctgtttgttcaccatcagcaggaac 126494
>emb|AL672087.6| Zebrafish DNA sequence from clone BUSM1-115O7 in linkage group 17 Contains the 3' UTR of a novel gene, a novel gene similar to AP4S1 (adaptor-related protein complex 4, sigma 1 subunit) and the 5' part of the strn3 gene for striatin, calmodulin binding protein 3, complete sequence Length = 14900 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 409 gtctgcccctgcttgttcaccagcagcacgaac 441 ||||||||||| |||||||||| ||||| |||| Sbjct: 2869 gtctgcccctgtttgttcaccatcagcaggaac 2901
>emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in linkage group 17, complete sequence Length = 153540 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 gtctgcccctgcttgttcaccagcagcacgaac 441 ||||||||||| |||||||||| ||||| |||| Sbjct: 117921 gtctgcccctgtttgttcaccatcagcaggaac 117889
>gb|AC044784.11| Homo sapiens chromosome 10 clone RP11-428L9, complete sequence Length = 179711 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 458 gcccctccccttccttcctctcgccctcccctt 490 |||||||||||||| ||| ||| |||||||||| Sbjct: 44664 gcccctccccttccctcccctccccctcccctt 44696
>gb|AC025205.12| Homo sapiens chromosome 17, clone RP11-140O10, complete sequence Length = 188417 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctc 479 ||||||||||||||||||||| Sbjct: 151385 cccctccccttccttcctctc 151405
>gb|AC008339.2|AC008339 Drosophila melanogaster, chromosome 2R, region 42A-42A, BAC clone BACR13P06, complete sequence Length = 180699 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 catacaaagtttcatatatta 36 ||||||||||||||||||||| Sbjct: 111744 catacaaagtttcatatatta 111724
>gb|AC009255.4|AC009255 Drosophila melanogaster, chromosome 2R, region 42A-42A, BAC clone BACR39E09, complete sequence Length = 163990 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 catacaaagtttcatatatta 36 ||||||||||||||||||||| Sbjct: 155569 catacaaagtttcatatatta 155549
>gb|AC017053.8| Homo sapiens BAC clone RP11-339D8 from 2, complete sequence Length = 181952 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 463 tccccttccttcctctcgccctccc 487 ||||||||||||||||| ||||||| Sbjct: 11876 tccccttccttcctctctccctccc 11852 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 463 tccccttccttcctctcgccctccc 487 ||||||||||||||||| ||||||| Sbjct: 11792 tccccttccttcctctctccctccc 11768
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence Length = 256992 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 460 ccctccccttccttcctctcgccctcccc 488 |||||||| ||||||| |||||||||||| Sbjct: 56485 ccctccccctccttcccctcgccctcccc 56513
>emb|BX678769.4| Mouse DNA sequence from clone RP23-435C20 on chromosome X, complete sequence Length = 205524 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 466 ccttccttcctctcgccctcccctt 490 |||||||||||||| |||||||||| Sbjct: 44705 ccttccttcctctctccctcccctt 44729
>dbj|AK122323.1| Mus musculus mRNA for mKIAA0596 protein Length = 6222 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 gacgaggaagaagagggaggc 263 ||||||||||||||||||||| Sbjct: 2164 gacgaggaagaagagggaggc 2184
>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence Length = 240821 Score = 42.1 bits (21), Expect = 1.9 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 462 ctccccttccttcctctcgccctcccctt 490 |||||||||||||||||| |||||||||| Sbjct: 8918 ctccccttccttcctctc-ccctcccctt 8891 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctc 479 ||||||||||||||||||||| Sbjct: 8901 cccctccccttccttcctctc 8881 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctc 479 ||||||||||||||||||||| Sbjct: 8861 cccctccccttccttcctctc 8841 Score = 40.1 bits (20), Expect = 7.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctcgccctcccctt 490 ||||||| ||||||||||||| |||||||||| Sbjct: 8881 cccctcctcttccttcctctc-ccctcccctt 8851
>gb|AC007121.1|AC007121 Drosophila melanogaster, chromosome 2R, region 42A8-42A16, P1 clones DS06954 and DS05325, complete sequence Length = 135182 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 catacaaagtttcatatatta 36 ||||||||||||||||||||| Sbjct: 33198 catacaaagtttcatatatta 33218
>gb|AE003784.5| Drosophila melanogaster chromosome 2R, section 5 of 73 of the complete sequence Length = 305162 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 catacaaagtttcatatatta 36 ||||||||||||||||||||| Sbjct: 174231 catacaaagtttcatatatta 174211
>gb|AC005900.1|AC005900 Homo sapiens chromosome 17, clone hRPK.998_F_8, complete sequence Length = 175066 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctc 479 ||||||||||||||||||||| Sbjct: 27138 cccctccccttccttcctctc 27158
>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence Length = 232605 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 460 ccctccccttccttcctctcgccctcccc 488 |||||||| ||||||| |||||||||||| Sbjct: 18552 ccctccccctccttcccctcgccctcccc 18580
>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199, complete sequence Length = 123325 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 242 cgacgaggaagaagagggagg 262 ||||||||||||||||||||| Sbjct: 60681 cgacgaggaagaagagggagg 60701
>emb|AL833774.4| Mouse DNA sequence from clone RP23-383I16 on chromosome 2, complete sequence Length = 194045 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 243 gacgaggaagaagagggaggc 263 ||||||||||||||||||||| Sbjct: 165620 gacgaggaagaagagggaggc 165600
>dbj|AB029482.1| Mus musculus mRNA for JNK-binding protein JNKBP1, complete cds Length = 4684 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 gacgaggaagaagagggaggc 263 ||||||||||||||||||||| Sbjct: 3279 gacgaggaagaagagggaggc 3299
>ref|NM_100608.2| Arabidopsis thaliana ATSTP2; carbohydrate transporter/ sugar porter AT1G07340 (ATSTP2) mRNA, complete cds Length = 1685 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 ccgacgaggaagaagagggaggcg 264 |||||||||||||||| ||||||| Sbjct: 416 ccgacgaggaagaagatggaggcg 393
>gb|AC110525.10| Mus musculus chromosome 8, clone RP23-82N11, complete sequence Length = 153281 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 caagaaatcatcttcaagca 122 |||||||||||||||||||| Sbjct: 104292 caagaaatcatcttcaagca 104311
>ref|XM_634942.1| Dictyostelium discoideum histidine kinase (DDB0220020), partial mRNA Length = 7167 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 ttcatatattacaccagtttcatc 49 |||||||| ||||||||||||||| Sbjct: 258 ttcatataatacaccagtttcatc 281
>ref|NM_196325.1| Oryza sativa (japonica cultivar-group) putative myosin heavy chain (OSJNBa0011L09.10), mRNA Length = 4521 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agaagagcatgcaggtgcag 210 |||||||||||||||||||| Sbjct: 4095 agaagagcatgcaggtgcag 4114
>gb|AF104455.1| Homo sapiens chromosome 7qtelo BAC F6, complete sequence Length = 71353 Score = 40.1 bits (20), Expect = 7.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctcgccctcccctt 490 ||||||||||||||||| ||| |||||||||| Sbjct: 54396 cccctccccttccttcccctc-ccctcccctt 54426
>gb|AC117721.8| Mus musculus chromosome 1, clone RP24-196D2, complete sequence Length = 170426 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 460 ccctccccttccttcctctcgccctccc 487 |||||||||||||||||| | ||||||| Sbjct: 8363 ccctccccttccttcctccctccctccc 8336
>gb|AC125021.12| Mus musculus chromosome 1, clone RP24-212P5, complete sequence Length = 174626 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ccctccccttccttcctctc 479 |||||||||||||||||||| Sbjct: 123270 ccctccccttccttcctctc 123289
>gb|AC093353.11| Mus musculus chromosome 10, clone RP23-19C22, complete sequence Length = 188921 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 452 tctctcgcccctccccttccttcctctcgccctccc 487 |||||| ||||||||||||| | ||||| ||||||| Sbjct: 75027 tctctctcccctccccttcccttctctccccctccc 74992
>ref|XM_597302.2| PREDICTED: Bos taurus similar to myeloid-associated differentiation marker (LOC519093), partial mRNA Length = 753 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 ggagaagagcatgcaggtgcagaa 212 |||||||| ||||||||||||||| Sbjct: 87 ggagaagaccatgcaggtgcagaa 64
>gb|AC145580.3| Mus musculus BAC clone RP24-380D12 from chromosome 16, complete sequence Length = 130390 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 469 tccttcctctcgccctcccctttc 492 ||||||||||| |||||||||||| Sbjct: 69165 tccttcctctccccctcccctttc 69142
>gb|BC053010.1| Mus musculus frizzled homolog 1 (Drosophila), mRNA (cDNA clone MGC:62195 IMAGE:5697795), complete cds Length = 4150 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 450 catctctcgcccctccccttcctt 473 |||||| ||||||||||||||||| Sbjct: 2847 catctcccgcccctccccttcctt 2870
>ref|XM_654665.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2153.2), mRNA Length = 975 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 aggaagaagagggaggcgta 266 |||||||||||||||||||| Sbjct: 262 aggaagaagagggaggcgta 243
>gb|AC115064.9| Mus musculus chromosome 1, clone RP24-401B18, complete sequence Length = 184893 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 cccttccttcctctcgccctcccc 488 ||||||||||||||| |||||||| Sbjct: 32217 cccttccttcctctctccctcccc 32194
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 ttccttcctctcgccctccc 487 |||||||||||||||||||| Sbjct: 25950274 ttccttcctctcgccctccc 25950293
>gb|AC163353.3| Mus musculus BAC clone RP23-55G7 from chromosome 6, complete sequence Length = 264135 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctcgccctcccctt 490 |||||||||||||| || ||| |||||||||| Sbjct: 80762 cccctccccttcctccccctccccctcccctt 80793
>gb|AY522921.1| Homo sapiens phospholipase A2, group VI (cytosolic, calcium-independent) (PLA2G6) gene, complete cds Length = 73317 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 466 ccttccttcctctcgccctcccct 489 ||||||||||||| |||||||||| Sbjct: 18322 ccttccttcctcttgccctcccct 18345
>gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosome 10, complete sequence Length = 198030 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 452 tctctcgcccctccccttccttcctctcgccctccc 487 |||||| ||||||||||||| | ||||| ||||||| Sbjct: 187837 tctctctcccctccccttcccttctctccccctccc 187802
>gb|AC132290.3| Mus musculus BAC clone RP24-318H2 from chromosome 10, complete sequence Length = 152306 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 461 cctccccttccttcctctcgccctcccc 488 ||||||||||||||| ||| |||||||| Sbjct: 89085 cctccccttccttccactctccctcccc 89112
>gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genomic sequence, complete sequence Length = 140720 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 ttccttcctctcgccctccc 487 |||||||||||||||||||| Sbjct: 57646 ttccttcctctcgccctccc 57627
>ref|XM_747091.1| Aspergillus fumigatus Af293 pH signal transduction protein PalA (Afu4g06400) partial mRNA Length = 2505 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 cgaaccggatccccatctct 456 |||||||||||||||||||| Sbjct: 2440 cgaaccggatccccatctct 2421
>gb|AC118603.9| Mus musculus chromosome 16, clone RP24-79L6, complete sequence Length = 190432 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 tccttcctctcgccctcccctttc 492 ||||||||||| |||||||||||| Sbjct: 46828 tccttcctctccccctcccctttc 46851
>gb|AC130818.3| Mus musculus BAC clone RP23-89F9 from chromosome 8, complete sequence Length = 220285 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 catgcaggtgcagaacctgt 217 |||||||||||||||||||| Sbjct: 102784 catgcaggtgcagaacctgt 102803
>gb|AC124450.3| Mus musculus BAC clone RP24-215C4 from chromosome 13, complete sequence Length = 157531 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 452 tctctcgcccctccccttccttcctctcgccctccc 487 |||||| | ||| ||||||||||||||| ||||||| Sbjct: 135725 tctctccctccttcccttccttcctctctccctccc 135690
>gb|AC123857.4| Mus musculus BAC clone RP23-344L21 from chromosome 13, complete sequence Length = 192371 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 452 tctctcgcccctccccttccttcctctcgccctccc 487 |||||| | ||| ||||||||||||||| ||||||| Sbjct: 170517 tctctccctccttcccttccttcctctctccctccc 170552
>gb|AC154722.2| Mus musculus BAC clone RP24-371J2 from chromosome 9, complete sequence Length = 186951 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 461 cctccccttccttcctctcgccctcccc 488 |||||||| |||| |||||||||||||| Sbjct: 109691 cctcccctccctttctctcgccctcccc 109718
>gb|AC163289.4| Mus musculus BAC clone RP23-269K2 from chromosome 9, complete sequence Length = 202378 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 461 cctccccttccttcctctcgccctcccc 488 |||||||| |||| |||||||||||||| Sbjct: 188882 cctcccctccctttctctcgccctcccc 188909
>gb|AC102821.3| Mus musculus chromosome 3, clone RP24-179A5, complete sequence Length = 155793 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 460 ccctccccttccttcctctcgccctccc 487 |||||||||||||| ||||| ||||||| Sbjct: 67885 ccctccccttcctttctctctccctccc 67858
>emb|AL731555.10| Human DNA sequence from clone RP11-157J13 on chromosome 10 Contains a pseudogene similar to part of guanine nucleotide binding protein (G protein) alpha inhibiting activity (GNAI2) and a CpG island, complete sequence Length = 178389 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctcgccctcc 486 ||||| ||||||||||||||| |||||| Sbjct: 47956 cccctacccttccttcctctctccctcc 47983
>emb|AL596442.33| Human DNA sequence from clone RP11-302L19 on chromosome 6 Contains a novel gene, a ribosomal protein L12 (RPL12) and five CpG islands, complete sequence Length = 110817 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 cgccagccgcgtctgcccct 418 |||||||||||||||||||| Sbjct: 104010 cgccagccgcgtctgcccct 104029
>emb|AL591378.2| Human DNA sequence from clone RP11-64P15 on chromosome X Contains the 5' end of a novel gene and a CpG island, complete sequence Length = 166016 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 462 ctccccttccttcctctcgccctcccct 489 ||||||||||||| |||| ||||||||| Sbjct: 98076 ctccccttccttcttctctccctcccct 98049
>emb|AL590675.3| Human DNA sequence from clone RP11-297O16 on chromosome 6, complete sequence Length = 48306 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 ttcaagcatttcatcaatat 134 |||||||||||||||||||| Sbjct: 3447 ttcaagcatttcatcaatat 3466
>gb|AC026231.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-114F4, complete sequence Length = 208199 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 450 catctctcgcccctccccttcctt 473 |||||| ||||||||||||||||| Sbjct: 142484 catctcccgcccctccccttcctt 142507
>gb|AC157926.4| Mus musculus chromosome 3, clone RP24-61J18, complete sequence Length = 231722 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 460 ccctccccttccttcctctcgccctccc 487 |||||||||||||| ||||| ||||||| Sbjct: 199329 ccctccccttcctttctctctccctccc 199356
>emb|AL022322.1|HS228A9 Human DNA sequence from clone CTA-228A9 on chromosome 22q12.3-13.32, complete sequence Length = 95375 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 ccttccttcctctcgccctcccct 489 ||||||||||||| |||||||||| Sbjct: 80090 ccttccttcctcttgccctcccct 80067
>gb|AC159379.14| Mus musculus 10 BAC RP23-210F14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226172 Score = 40.1 bits (20), Expect = 7.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctcgccctcccctt 490 ||||||||||||| ||||||| |||||||||| Sbjct: 155184 cccctccccttccctcctctc-ccctcccctt 155214
>emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 59 Length = 199199 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 catggaatatggagaagagc 198 |||||||||||||||||||| Sbjct: 158981 catggaatatggagaagagc 158962
>emb|AL035394.1|ATF9D16 Arabidopsis thaliana DNA chromosome 4, BAC clone F9D16 (ESSAII project) Length = 119430 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 catggaatatggagaagagc 198 |||||||||||||||||||| Sbjct: 23191 catggaatatggagaagagc 23172
>gb|AC164579.5| Mus musculus 6 BAC RP23-384P24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214578 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 ccccttccttcctctcgccctccc 487 |||||||||||||||| ||||||| Sbjct: 83059 ccccttccttcctctctccctccc 83036
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 gccctcaagggcgcggcgct 370 |||||||||||||||||||| Sbjct: 6944738 gccctcaagggcgcggcgct 6944719
>gb|AC161426.5| Mus musculus BAC clone RP23-69L13 from chromosome 10, complete sequence Length = 255667 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 461 cctccccttccttcctctcgccctcccc 488 ||||||||||||||| ||| |||||||| Sbjct: 59745 cctccccttccttccactctccctcccc 59772
>gb|AC158662.7| Mus musculus 6 BAC RP23-20K24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250218 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 ccccttccttcctctcgccctccc 487 |||||||||||||||| ||||||| Sbjct: 11714 ccccttccttcctctctccctccc 11691
>gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor (COL21A1) gene, complete cds, alternatively spliced Length = 381696 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 ttcaagcatttcatcaatat 134 |||||||||||||||||||| Sbjct: 122019 ttcaagcatttcatcaatat 122000
>dbj|AK143101.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130102K05 product:frizzled homolog 1 (Drosophila), full insert sequence Length = 4164 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 450 catctctcgcccctccccttcctt 473 |||||| ||||||||||||||||| Sbjct: 2912 catctcccgcccctccccttcctt 2935
>gb|AC104122.2| Homo sapiens chromosome 5 clone RP11-410P18, complete sequence Length = 142636 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctcgcc 482 ||||||||||||||||| |||||| Sbjct: 115275 cccctccccttccttcccctcgcc 115252
>gb|AC139053.15| Mus musculus chromosome 1, clone RP23-2I19, complete sequence Length = 232850 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 460 ccctccccttccttcctctcgccctccc 487 |||||||||||||||||| | ||||||| Sbjct: 109121 ccctccccttccttcctccctccctccc 109148
>gb|AC093510.2| Homo sapiens chromosome 5 clone CTD-2373J6, complete sequence Length = 125933 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctcgcc 482 ||||||||||||||||| |||||| Sbjct: 40806 cccctccccttccttcccctcgcc 40783
>gb|AC115069.6| Mus musculus chromosome 7, clone RP24-405B11, complete sequence Length = 168442 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 ccttccttcctctcgccctcccct 489 |||||||||||||| ||||||||| Sbjct: 137874 ccttccttcctctctccctcccct 137851
>gb|AC159738.2| Mus musculus BAC clone RP24-372O2 from chromosome 9, complete sequence Length = 147599 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctcgccctcc 486 ||||| ||||||||||||||| |||||| Sbjct: 61868 ccccttcccttccttcctctccccctcc 61895
>gb|DQ066850.1| Strongylocentrotus purpuratus clone A20 extracellular protein (endo16) gene, promoter region Length = 1038 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 cgcccctccccttccttcct 476 |||||||||||||||||||| Sbjct: 60 cgcccctccccttccttcct 79
>gb|AC153576.3| Mus musculus 6 BAC RP23-330J17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215953 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 455 ctcgcccctccccttccttcctct 478 |||||||||||||||||| ||||| Sbjct: 100845 ctcgcccctccccttcctgcctct 100822
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cgacgaggaagaagagggag 261 |||||||||||||||||||| Sbjct: 4301283 cgacgaggaagaagagggag 4301264
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cgacgaggaagaagagggag 261 |||||||||||||||||||| Sbjct: 3771228 cgacgaggaagaagagggag 3771247
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctcgccctcc 486 ||||||||||||||||||| | |||||| Sbjct: 8364124 cccctccccttccttcctccctccctcc 8364097
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 ttccttcctctcgccctccc 487 |||||||||||||||||||| Sbjct: 26041583 ttccttcctctcgccctccc 26041602
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 cccctccccttccttcctct 478 |||||||||||||||||||| Sbjct: 27323544 cccctccccttccttcctct 27323525
>emb|BX813610.1|CNS0AALW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZG10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1690 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 ccgacgaggaagaagagggaggcg 264 |||||||||||||||| ||||||| Sbjct: 414 ccgacgaggaagaagatggaggcg 391
>gb|AC097536.3| Homo sapiens BAC clone RP11-803N5 from 2, complete sequence Length = 194553 Score = 40.1 bits (20), Expect = 7.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctcgccctcccctt 490 ||||||||||||||||| ||| |||||||||| Sbjct: 9416 cccctccccttccttcccctc-ccctcccctt 9386
>gb|AC154389.1| Mus musculus BAC clone RP23-2H9 from chromosome 13, complete sequence Length = 215256 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 cccctccccttccttcctct 478 |||||||||||||||||||| Sbjct: 199189 cccctccccttccttcctct 199208
>gb|AC154482.2| Mus musculus BAC clone RP23-198P13 from chromosome 13, complete sequence Length = 214193 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 cccctccccttccttcctct 478 |||||||||||||||||||| Sbjct: 165574 cccctccccttccttcctct 165555
>gb|AC022464.4|AC022464 Genomic sequence for Arabidopsis thaliana BAC F22G5 from chromosome I, complete sequence Length = 104830 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 ccgacgaggaagaagagggaggcg 264 |||||||||||||||| ||||||| Sbjct: 88740 ccgacgaggaagaagatggaggcg 88763
>gb|AC111003.3| Homo sapiens BAC clone RP11-263J14 from 4, complete sequence Length = 96074 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 ccccttccttcctctcgccctccc 487 |||||||||||||||| ||||||| Sbjct: 42460 ccccttccttcctctctccctccc 42437
>gb|AC167721.1| Mus musculus BAC clone RP23-373F11 from chromosome 9, complete sequence Length = 170132 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tctttgtttcgttcccaggc 518 |||||||||||||||||||| Sbjct: 132922 tctttgtttcgttcccaggc 132941
>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496D04 Length = 197358 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cgacgaggaagaagagggag 261 |||||||||||||||||||| Sbjct: 10340 cgacgaggaagaagagggag 10359
>dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0014E08 Length = 144219 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 cccctccccttccttcctct 478 |||||||||||||||||||| Sbjct: 6439 cccctccccttccttcctct 6420
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 cccctccccttccttcctct 478 |||||||||||||||||||| Sbjct: 104061 cccctccccttccttcctct 104042
>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0603C10 Length = 187620 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 459 cccctccccttccttcctctcgccctcc 486 ||||||||||||||||||| | |||||| Sbjct: 157629 cccctccccttccttcctccctccctcc 157602
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cgacgaggaagaagagggag 261 |||||||||||||||||||| Sbjct: 115579 cgacgaggaagaagagggag 115598
>dbj|AK119317.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-H06, full insert sequence Length = 1685 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 agaagagcatgcaggtgcag 210 |||||||||||||||||||| Sbjct: 1029 agaagagcatgcaggtgcag 1048
>gb|AC110033.9| Mus musculus chromosome 1, clone RP23-117O18, complete sequence Length = 260404 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 cccttccttcctctcgccctcccc 488 ||||||||||||||| |||||||| Sbjct: 56593 cccttccttcctctctccctcccc 56616
>emb|AL162511.5|CNS01RHV Human chromosome 14 DNA sequence BAC R-259K15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 165126 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 ccctccccttccttcctctc 479 |||||||||||||||||||| Sbjct: 120115 ccctccccttccttcctctc 120096
>emb|AL356803.2|CNS05TDL Human chromosome 14 DNA sequence Partial sequence from BAC C-2130G23 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 88380 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 ccctccccttccttcctctc 479 |||||||||||||||||||| Sbjct: 26216 ccctccccttccttcctctc 26197
>gb|AC164420.4| Mus musculus chromosome 8, clone RP24-388L13, complete sequence Length = 174120 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 452 tctctcgcccctccccttccttcctctc 479 |||||| |||||||||||||| |||||| Sbjct: 43258 tctctctcccctccccttcctccctctc 43231
>gb|AC108796.10| Mus musculus chromosome 1, clone RP23-349L18, complete sequence Length = 188713 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 cccttccttcctctcgccctcccc 488 ||||||||||||||| |||||||| Sbjct: 71112 cccttccttcctctctccctcccc 71135
>gb|AC111084.12| Mus musculus chromosome 7, clone RP23-143J24, complete sequence Length = 205564 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 466 ccttccttcctctcgccctcccct 489 |||||||||||||| ||||||||| Sbjct: 175511 ccttccttcctctctccctcccct 175534
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ccgacgaggaagaagaggga 260 |||||||||||||||||||| Sbjct: 1031485 ccgacgaggaagaagaggga 1031504
>gb|AC140446.5| Mus musculus BAC clone RP24-114J11 from chromosome 8, complete sequence Length = 152392 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 452 tctctcgcccctccccttccttcctctc 479 |||||| |||||||||||||| |||||| Sbjct: 111540 tctctctcccctccccttcctccctctc 111513
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gcatttcatcaatatttgcc 139 |||||||||||||||||||| Sbjct: 692115 gcatttcatcaatatttgcc 692134
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cgacgaggaagaagagggag 261 |||||||||||||||||||| Sbjct: 4301270 cgacgaggaagaagagggag 4301251
>emb|BX001060.3|CNS08CE8 Oryza sativa chromosome 12, . BAC OSJNBa0056M17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 178147 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 cgacgaggaagaagagggag 261 |||||||||||||||||||| Sbjct: 150428 cgacgaggaagaagagggag 150447
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 155 tgaaggtaatctgatgcaatacct 178 ||||||||||||||| |||||||| Sbjct: 101545 tgaaggtaatctgattcaatacct 101522
>gb|AC122506.4| Mus musculus BAC clone RP24-426J4 from 15, complete sequence Length = 166555 Score = 40.1 bits (20), Expect = 7.7 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 450 catctctcgcccctccccttccttcctctcgccctcccct 489 |||||||| ||||||||||||| ||| ||| ||||||||| Sbjct: 136181 catctctcccccctccccttccctcccctc-ccctcccct 136219
>gb|AC134523.5| Mus musculus BAC clone RP24-492M8 from 5, complete sequence Length = 178801 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 ccctccccttccttcctctc 479 |||||||||||||||||||| Sbjct: 120371 ccctccccttccttcctctc 120352
>gb|AC132228.3| Mus musculus BAC clone RP24-480G11 from 6, complete sequence Length = 180203 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 459 cccctccccttccttcctctcgccctcccctt 490 |||||||||||||| || ||| |||||||||| Sbjct: 59661 cccctccccttcctccccctccccctcccctt 59692
>emb|CT025562.10| Mouse DNA sequence from clone RP24-225O12 on chromosome 14, complete sequence Length = 194430 Score = 40.1 bits (20), Expect = 7.7 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 458 gcccctccccttccttcc-tctcgccctcccctttc 492 |||||||||||||||||| || | |||||||||||| Sbjct: 73313 gcccctccccttccttccttccctccctcccctttc 73278
>ref|NM_021457.2| Mus musculus frizzled homolog 1 (Drosophila) (Fzd1), mRNA Length = 4150 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 450 catctctcgcccctccccttcctt 473 |||||| ||||||||||||||||| Sbjct: 2847 catctcccgcccctccccttcctt 2870
>gb|AC172368.1| Mus musculus BAC clone RP23-170F12 from chromosome 9, complete sequence Length = 231123 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 tctttgtttcgttcccaggc 518 |||||||||||||||||||| Sbjct: 1856 tctttgtttcgttcccaggc 1837
>emb|AL844871.11| Mouse DNA sequence from clone RP23-271B15 on chromosome 2, complete sequence Length = 179754 Score = 40.1 bits (20), Expect = 7.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 461 cctccccttccttcctctcgccctcccctttc 492 |||||||||||| ||||| |||||||||||| Sbjct: 76186 cctccccttcctccctctgtccctcccctttc 76155
>emb|AL772145.9| Mouse DNA sequence from clone RP23-212H4 on chromosome 3, complete sequence Length = 228623 Score = 40.1 bits (20), Expect = 7.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 452 tctctcgcccctccccttccttcctctcgccctccc 487 |||||| | ||| ||||||||||||||| ||||||| Sbjct: 163299 tctctctctccttcccttccttcctctctccctccc 163334 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,522,439 Number of Sequences: 3902068 Number of extensions: 5522439 Number of successful extensions: 120924 Number of sequences better than 10.0: 160 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 119983 Number of HSP's gapped (non-prelim): 951 length of query: 565 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 542 effective length of database: 17,143,297,704 effective search space: 9291667355568 effective search space used: 9291667355568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
