ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasdm20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ... 163 2e-40
2RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ... 163 2e-40
3RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ... 161 6e-40
4RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ... 161 8e-40
5RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a... 161 8e-40
6RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a... 160 2e-39
7RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a... 159 3e-39
8RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a... 159 3e-39
9RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a... 157 9e-39
10RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ... 157 2e-38
11RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a... 157 2e-38
12RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a... 157 2e-38
13RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a... 156 2e-38
14RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ... 155 6e-38
15RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a... 154 8e-38
16RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a... 145 6e-35
17RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a... 127 2e-29
18RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a... 124 1e-28
19FILA_HUMAN (P20930) Filaggrin 32 1.0
20EPHB6_PANTR (P0C0K6) Ephrin type-B receptor 6 precursor (Tyrosin... 31 1.3
21EPHB6_HUMAN (O15197) Ephrin type-B receptor 6 precursor (Tyrosin... 31 1.3
22LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor 31 1.7
23MAGL2_HUMAN (Q9UJ55) MAGE-like protein 2 (Necdin-like protein 1)... 30 3.8
24EPHB6_MOUSE (O08644) Ephrin type-B receptor 6 precursor (Tyrosin... 29 5.0
25EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-... 29 5.0
26LEP4_XANCP (Q56763) Type 4 prepilin-like proteins leader peptide... 29 6.6
27Y3433_MYCTU (O06250) Hypothetical protein Rv3433c/MT3539 28 8.6
28PTRA_SALTY (Q8ZMB5) Protease 3 precursor (EC 3.4.24.55) (Proteas... 28 8.6
29PTRA_SALTI (Q8Z418) Protease 3 precursor (EC 3.4.24.55) (Proteas... 28 8.6

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  163 bits (413), Expect = 2e-40
 Identities = 77/78 (98%), Positives = 77/78 (98%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNK ENPRVPIVVTGNDFSTLYAPLIRDGR
Sbjct: 230 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGR 289

Query: 251 MEKFYWAPTRDDRIGVCK 198
           MEKFYWAPTRDDRIGVCK
Sbjct: 290 MEKFYWAPTRDDRIGVCK 307



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = -1

Query: 201 QGTXXVPEGCTDQNAKNYDPTARSDDGSCLYTF 103
           QGT  VPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 432 QGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464



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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  163 bits (413), Expect = 2e-40
 Identities = 76/78 (97%), Positives = 78/78 (100%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGR
Sbjct: 227 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 286

Query: 251 MEKFYWAPTRDDRIGVCK 198
           MEKFYWAPTR+DRIGVCK
Sbjct: 287 MEKFYWAPTREDRIGVCK 304



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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  161 bits (408), Expect = 6e-40
 Identities = 77/87 (88%), Positives = 80/87 (91%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGR
Sbjct: 240 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 299

Query: 251 MEKFYWAPTRDDRIGVCKVLXPCRKVA 171
           MEKFYWAPTR+DRIGVCK +     VA
Sbjct: 300 MEKFYWAPTREDRIGVCKGIFRTDNVA 326



 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 24/32 (75%), Positives = 25/32 (78%)
 Frame = -1

Query: 198 GTXXVPEGCTDQNAKNYDPTARSDDGSCLYTF 103
           G   VPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 445 GNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476



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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  161 bits (407), Expect = 8e-40
 Identities = 75/78 (96%), Positives = 77/78 (98%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGR
Sbjct: 240 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 299

Query: 251 MEKFYWAPTRDDRIGVCK 198
           MEKFYWAPTR+DRIGVCK
Sbjct: 300 MEKFYWAPTREDRIGVCK 317



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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  161 bits (407), Expect = 8e-40
 Identities = 74/78 (94%), Positives = 77/78 (98%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGR
Sbjct: 230 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGR 289

Query: 251 MEKFYWAPTRDDRIGVCK 198
           MEKFYWAPTRDDR+GVCK
Sbjct: 290 MEKFYWAPTRDDRVGVCK 307



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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  160 bits (404), Expect = 2e-39
 Identities = 74/78 (94%), Positives = 77/78 (98%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGR
Sbjct: 236 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGR 295

Query: 251 MEKFYWAPTRDDRIGVCK 198
           MEKFYWAPTR+DRIGVCK
Sbjct: 296 MEKFYWAPTREDRIGVCK 313



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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  159 bits (402), Expect = 3e-39
 Identities = 74/77 (96%), Positives = 76/77 (98%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGR
Sbjct: 240 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 299

Query: 251 MEKFYWAPTRDDRIGVC 201
           MEKFYWAPTR+DRIGVC
Sbjct: 300 MEKFYWAPTREDRIGVC 316



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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  159 bits (402), Expect = 3e-39
 Identities = 74/78 (94%), Positives = 76/78 (97%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RVPI+VTGNDFSTLYAPLIRDGR
Sbjct: 242 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGR 301

Query: 251 MEKFYWAPTRDDRIGVCK 198
           MEKFYWAPTRDDR+GVCK
Sbjct: 302 MEKFYWAPTRDDRVGVCK 319



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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  157 bits (398), Expect = 9e-39
 Identities = 72/77 (93%), Positives = 76/77 (98%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGR
Sbjct: 237 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 296

Query: 251 MEKFYWAPTRDDRIGVC 201
           M+KFYWAPTR+DRIG+C
Sbjct: 297 MDKFYWAPTREDRIGIC 313



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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  157 bits (396), Expect = 2e-38
 Identities = 73/78 (93%), Positives = 76/78 (97%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGR
Sbjct: 244 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGR 303

Query: 251 MEKFYWAPTRDDRIGVCK 198
           MEKFYWAPTR+DRIGVCK
Sbjct: 304 MEKFYWAPTREDRIGVCK 321



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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  157 bits (396), Expect = 2e-38
 Identities = 73/78 (93%), Positives = 76/78 (97%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGR
Sbjct: 239 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGR 298

Query: 251 MEKFYWAPTRDDRIGVCK 198
           MEKFYWAPTR+DRIGVCK
Sbjct: 299 MEKFYWAPTREDRIGVCK 316



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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  157 bits (396), Expect = 2e-38
 Identities = 73/78 (93%), Positives = 76/78 (97%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+N RVPI+VTGNDFSTLYAPLIRDGR
Sbjct: 244 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGR 303

Query: 251 MEKFYWAPTRDDRIGVCK 198
           MEKFYWAPTR+DRIGVCK
Sbjct: 304 MEKFYWAPTREDRIGVCK 321



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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  156 bits (395), Expect = 2e-38
 Identities = 74/86 (86%), Positives = 78/86 (90%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RVPI+ TGNDFSTLYAPLIRDGR
Sbjct: 240 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGR 299

Query: 251 MEKFYWAPTRDDRIGVCKVLXPCRKV 174
           MEKFYWAPTR+DRIGVCK +    K+
Sbjct: 300 MEKFYWAPTREDRIGVCKGIFRTDKI 325



 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = -1

Query: 186 VPEGCTDQNAKNYDPTARSDDGSCLYTF 103
           VPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 447 VPEGCTDPVAENFDPTARSDDGTCVYNF 474



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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  155 bits (391), Expect = 6e-38
 Identities = 72/77 (93%), Positives = 75/77 (97%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGR
Sbjct: 244 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGR 303

Query: 251 MEKFYWAPTRDDRIGVC 201
           MEKFYWAPTR+DRIGVC
Sbjct: 304 MEKFYWAPTREDRIGVC 320



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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  154 bits (390), Expect = 8e-38
 Identities = 73/86 (84%), Positives = 78/86 (90%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK++N RVPI+VTGNDFSTLYAPLIRDGR
Sbjct: 238 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGR 297

Query: 251 MEKFYWAPTRDDRIGVCKVLXPCRKV 174
           MEKFYWAPTR+DRIGVC  +    KV
Sbjct: 298 MEKFYWAPTREDRIGVCTGIFKTDKV 323



 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = -1

Query: 186 VPEGCTDQNAKNYDPTARSDDGSCLY 109
           V +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 445 VAQGCTDPEAKNYDPTARSDDGSCTY 470



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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  145 bits (365), Expect = 6e-35
 Identities = 68/77 (88%), Positives = 71/77 (92%)
 Frame = -2

Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252
           TTQYTVNNQMVNATLMNIAD PTNVQLPG+Y  EE PRVPIV TGNDFSTLYAPLIRDGR
Sbjct: 213 TTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGR 272

Query: 251 MEKFYWAPTRDDRIGVC 201
           MEK+YW PTR+DRIGVC
Sbjct: 273 MEKYYWNPTREDRIGVC 289



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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  127 bits (318), Expect = 2e-29
 Identities = 58/75 (77%), Positives = 65/75 (86%)
 Frame = -2

Query: 428 TQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 249
           TQYTVN Q+VNATLMNIAD PT+VQLPG Y+     RVPI+VTGNDFSTLYAPLIRDGRM
Sbjct: 114 TQYTVNTQLVNATLMNIADNPTDVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRM 173

Query: 248 EKFYWAPTRDDRIGV 204
           EKFYW P RDD++G+
Sbjct: 174 EKFYWEPNRDDKVGI 188



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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  124 bits (311), Expect = 1e-28
 Identities = 57/75 (76%), Positives = 65/75 (86%)
 Frame = -2

Query: 428 TQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 249
           TQYTVN Q+VNATLMNIAD PT+VQLPG Y+     RVPI+VTGNDFSTLYAPLIRDGRM
Sbjct: 114 TQYTVNTQLVNATLMNIADNPTDVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRM 173

Query: 248 EKFYWAPTRDDRIGV 204
           EKFYW P RD+++G+
Sbjct: 174 EKFYWEPHRDEKVGI 188



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>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
 Frame = -1

Query: 456  RWCG*XGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 331
            RW G   RNH  +   Q  DG RHP  H   R  H  +A    Q G
Sbjct: 3554 RWSGSASRNHRGSAQEQSRDGSRHPTSHHEDRAGHGHSAESSRQSG 3599



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = -1

Query: 456  RWCG*XGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 331
            RW G   RNH  +   Q  DG RHP  H+  R  H  +A    Q G
Sbjct: 2906 RWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSG 2951



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = -1

Query: 456  RWCG*XGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 331
            RW G   RNH  +   Q  DG RHP  H+  R  H  +A    Q G
Sbjct: 2582 RWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSG 2627



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
 Frame = -1

Query: 456  RWCG*XGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 331
            RW G   RNH  +   Q  DG RHP  H   R  H  +A    Q G
Sbjct: 1933 RWSGSASRNHLGSAWEQSRDGSRHPGSHHEDRAGHGHSADSSRQSG 1978



 Score = 30.0 bits (66), Expect = 2.9
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = -1

Query: 456 RWCG*XGRNH--AVHRQQPDGERHPDEHR--RCPHQRAA 352
           RW G   RNH  +   Q  DG RHP  H   R  H  +A
Sbjct: 636 RWSGSASRNHHGSAQEQSRDGSRHPRSHHEDRAGHGHSA 674



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>EPHB6_PANTR (P0C0K6) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6)
          Length = 1005

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = +2

Query: 320 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPXY 445
           GGSPP   C G  +W    G  RC  G++   G   C A  R  Y
Sbjct: 262 GGSPPRLHCNGEGKWMVAVGGCRCQPGYQPARGDKACQACPRGLY 306



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>EPHB6_HUMAN (O15197) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6) (HEP)
          Length = 1006

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = +2

Query: 320 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPXY 445
           GGSPP   C G  +W    G  RC  G++   G   C A  R  Y
Sbjct: 263 GGSPPRLHCNGEGKWMVAVGGCRCQPGYQPARGDKACQACPRGLY 307



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>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor|
          Length = 3695

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 6/81 (7%)
 Frame = +3

Query: 120  CRRRSLPLGRSSWHFGRCNLP-----ARXXYLADTDTVVTGGSPV-ELLHTTITDQRSVE 281
            CRR   P GR   H GRCN P      R    +    V   G PV   +H  + D   V 
Sbjct: 2114 CRRCQCPGGRCDPHTGRCNCPPGLSGERCDTCSQQHQVPVPGGPVGHSIHCEVCDHCVV- 2172

Query: 282  RREIVTGDDDGHTGVLLLVVH 344
                +  DD    G LL  +H
Sbjct: 2173 ----LLLDDLERAGALLPAIH 2189



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>MAGL2_HUMAN (Q9UJ55) MAGE-like protein 2 (Necdin-like protein 1) (Protein nM15)|
          Length = 529

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
 Frame = +2

Query: 206 HRYGRHGWEPSRTSPYDHHGSEEXXXXXXXXXXXXWAHGGSPPCCTCQGAARWWGHR--R 379
           H    H W+  R  P+++    +            W H  +P     +G + W G    R
Sbjct: 181 HTLAFHDWQGPR--PWENLNLSDWEVQSPIQVSGDWEHPNTP-----RGLSGWEGPSTSR 233

Query: 380 CSSGWRSPSGC*RCTAWFRP 439
             SGW  PS     +AW  P
Sbjct: 234 ILSGWEGPSASWALSAWEGP 253



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>EPHB6_MOUSE (O08644) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6) (MEP)
          Length = 1014

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
 Frame = +2

Query: 320 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTA 427
           GGSPP   C G  RW    G  RC  G +   G   C A
Sbjct: 273 GGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQA 311



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>EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6)
          Length = 1013

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
 Frame = +2

Query: 320 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTA 427
           GGSPP   C G  RW    G  RC  G +   G   C A
Sbjct: 272 GGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQA 310



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>LEP4_XANCP (Q56763) Type 4 prepilin-like proteins leader peptide-processing|
           enzyme [Includes: Leader peptidase (EC 3.4.23.43)
           (Prepilin peptidase); N-methyltransferase (EC 2.1.1.-)]
          Length = 287

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +1

Query: 292 SLPVTTMGTRGFSSLLYMPGSCTLVGASAMFIRVAFTIWLL 414
           +LP+  +G  G    LYMP    L+GA+  ++ + +T+W L
Sbjct: 157 TLPLMWLGLVGSMDNLYMPAKPALLGAAVGYVSL-WTVWWL 196



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>Y3433_MYCTU (O06250) Hypothetical protein Rv3433c/MT3539|
          Length = 473

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = -2

Query: 374 DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKV 195
           D P  V   G+    ++P +   V G +  T+  P    G   +   AP  DDR+G C+ 
Sbjct: 316 DLPVLVDADGLTMLADHPDL---VAGRNAPTVLTP--HAGEFARLAGAPPGDDRVGACRQ 370

Query: 194 L 192
           L
Sbjct: 371 L 371



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>PTRA_SALTY (Q8ZMB5) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 201 ADTDTVVTGGSPVELLHTTITDQRSVERREIV 296
           AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 338 ADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369



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>PTRA_SALTI (Q8Z418) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 201 ADTDTVVTGGSPVELLHTTITDQRSVERREIV 296
           AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 338 ADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,592,394
Number of Sequences: 219361
Number of extensions: 1404753
Number of successful extensions: 3794
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3786
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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