ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasdm20 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 163 bits (413), Expect = 2e-40 Identities = 77/78 (98%), Positives = 77/78 (98%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNK ENPRVPIVVTGNDFSTLYAPLIRDGR Sbjct: 230 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGR 289 Query: 251 MEKFYWAPTRDDRIGVCK 198 MEKFYWAPTRDDRIGVCK Sbjct: 290 MEKFYWAPTRDDRIGVCK 307 Score = 70.9 bits (172), Expect = 2e-12 Identities = 31/33 (93%), Positives = 31/33 (93%) Frame = -1 Query: 201 QGTXXVPEGCTDQNAKNYDPTARSDDGSCLYTF 103 QGT VPEGCTDQNAKNYDPTARSDDGSCLYTF Sbjct: 432 QGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 163 bits (413), Expect = 2e-40 Identities = 76/78 (97%), Positives = 78/78 (100%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGR Sbjct: 227 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 286 Query: 251 MEKFYWAPTRDDRIGVCK 198 MEKFYWAPTR+DRIGVCK Sbjct: 287 MEKFYWAPTREDRIGVCK 304
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 161 bits (408), Expect = 6e-40 Identities = 77/87 (88%), Positives = 80/87 (91%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGR Sbjct: 240 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 299 Query: 251 MEKFYWAPTRDDRIGVCKVLXPCRKVA 171 MEKFYWAPTR+DRIGVCK + VA Sbjct: 300 MEKFYWAPTREDRIGVCKGIFRTDNVA 326 Score = 56.6 bits (135), Expect = 3e-08 Identities = 24/32 (75%), Positives = 25/32 (78%) Frame = -1 Query: 198 GTXXVPEGCTDQNAKNYDPTARSDDGSCLYTF 103 G VPEGCTD A NYDPTARSDDGSC+Y F Sbjct: 445 GNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 161 bits (407), Expect = 8e-40 Identities = 75/78 (96%), Positives = 77/78 (98%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGR Sbjct: 240 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 299 Query: 251 MEKFYWAPTRDDRIGVCK 198 MEKFYWAPTR+DRIGVCK Sbjct: 300 MEKFYWAPTREDRIGVCK 317
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 161 bits (407), Expect = 8e-40 Identities = 74/78 (94%), Positives = 77/78 (98%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGR Sbjct: 230 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGR 289 Query: 251 MEKFYWAPTRDDRIGVCK 198 MEKFYWAPTRDDR+GVCK Sbjct: 290 MEKFYWAPTRDDRVGVCK 307
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 160 bits (404), Expect = 2e-39 Identities = 74/78 (94%), Positives = 77/78 (98%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGR Sbjct: 236 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGR 295 Query: 251 MEKFYWAPTRDDRIGVCK 198 MEKFYWAPTR+DRIGVCK Sbjct: 296 MEKFYWAPTREDRIGVCK 313
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 159 bits (402), Expect = 3e-39 Identities = 74/77 (96%), Positives = 76/77 (98%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGR Sbjct: 240 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 299 Query: 251 MEKFYWAPTRDDRIGVC 201 MEKFYWAPTR+DRIGVC Sbjct: 300 MEKFYWAPTREDRIGVC 316
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 159 bits (402), Expect = 3e-39 Identities = 74/78 (94%), Positives = 76/78 (97%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RVPI+VTGNDFSTLYAPLIRDGR Sbjct: 242 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGR 301 Query: 251 MEKFYWAPTRDDRIGVCK 198 MEKFYWAPTRDDR+GVCK Sbjct: 302 MEKFYWAPTRDDRVGVCK 319
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 157 bits (398), Expect = 9e-39 Identities = 72/77 (93%), Positives = 76/77 (98%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGR Sbjct: 237 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGR 296 Query: 251 MEKFYWAPTRDDRIGVC 201 M+KFYWAPTR+DRIG+C Sbjct: 297 MDKFYWAPTREDRIGIC 313
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 157 bits (396), Expect = 2e-38 Identities = 73/78 (93%), Positives = 76/78 (97%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGR Sbjct: 244 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGR 303 Query: 251 MEKFYWAPTRDDRIGVCK 198 MEKFYWAPTR+DRIGVCK Sbjct: 304 MEKFYWAPTREDRIGVCK 321
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 157 bits (396), Expect = 2e-38 Identities = 73/78 (93%), Positives = 76/78 (97%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGR Sbjct: 239 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGR 298 Query: 251 MEKFYWAPTRDDRIGVCK 198 MEKFYWAPTR+DRIGVCK Sbjct: 299 MEKFYWAPTREDRIGVCK 316
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 157 bits (396), Expect = 2e-38 Identities = 73/78 (93%), Positives = 76/78 (97%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+N RVPI+VTGNDFSTLYAPLIRDGR Sbjct: 244 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGR 303 Query: 251 MEKFYWAPTRDDRIGVCK 198 MEKFYWAPTR+DRIGVCK Sbjct: 304 MEKFYWAPTREDRIGVCK 321
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 156 bits (395), Expect = 2e-38 Identities = 74/86 (86%), Positives = 78/86 (90%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RVPI+ TGNDFSTLYAPLIRDGR Sbjct: 240 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGR 299 Query: 251 MEKFYWAPTRDDRIGVCKVLXPCRKV 174 MEKFYWAPTR+DRIGVCK + K+ Sbjct: 300 MEKFYWAPTREDRIGVCKGIFRTDKI 325 Score = 52.8 bits (125), Expect = 4e-07 Identities = 21/28 (75%), Positives = 25/28 (89%) Frame = -1 Query: 186 VPEGCTDQNAKNYDPTARSDDGSCLYTF 103 VPEGCTD A+N+DPTARSDDG+C+Y F Sbjct: 447 VPEGCTDPVAENFDPTARSDDGTCVYNF 474
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 155 bits (391), Expect = 6e-38 Identities = 72/77 (93%), Positives = 75/77 (97%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGR Sbjct: 244 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGR 303 Query: 251 MEKFYWAPTRDDRIGVC 201 MEKFYWAPTR+DRIGVC Sbjct: 304 MEKFYWAPTREDRIGVC 320
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 154 bits (390), Expect = 8e-38 Identities = 73/86 (84%), Positives = 78/86 (90%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK++N RVPI+VTGNDFSTLYAPLIRDGR Sbjct: 238 TTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGR 297 Query: 251 MEKFYWAPTRDDRIGVCKVLXPCRKV 174 MEKFYWAPTR+DRIGVC + KV Sbjct: 298 MEKFYWAPTREDRIGVCTGIFKTDKV 323 Score = 50.8 bits (120), Expect = 2e-06 Identities = 21/26 (80%), Positives = 22/26 (84%) Frame = -1 Query: 186 VPEGCTDQNAKNYDPTARSDDGSCLY 109 V +GCTD AKNYDPTARSDDGSC Y Sbjct: 445 VAQGCTDPEAKNYDPTARSDDGSCTY 470
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 145 bits (365), Expect = 6e-35 Identities = 68/77 (88%), Positives = 71/77 (92%) Frame = -2 Query: 431 TTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGR 252 TTQYTVNNQMVNATLMNIAD PTNVQLPG+Y EE PRVPIV TGNDFSTLYAPLIRDGR Sbjct: 213 TTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGR 272 Query: 251 MEKFYWAPTRDDRIGVC 201 MEK+YW PTR+DRIGVC Sbjct: 273 MEKYYWNPTREDRIGVC 289
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 127 bits (318), Expect = 2e-29 Identities = 58/75 (77%), Positives = 65/75 (86%) Frame = -2 Query: 428 TQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 249 TQYTVN Q+VNATLMNIAD PT+VQLPG Y+ RVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 114 TQYTVNTQLVNATLMNIADNPTDVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRM 173 Query: 248 EKFYWAPTRDDRIGV 204 EKFYW P RDD++G+ Sbjct: 174 EKFYWEPNRDDKVGI 188
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 124 bits (311), Expect = 1e-28 Identities = 57/75 (76%), Positives = 65/75 (86%) Frame = -2 Query: 428 TQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRM 249 TQYTVN Q+VNATLMNIAD PT+VQLPG Y+ RVPI+VTGNDFSTLYAPLIRDGRM Sbjct: 114 TQYTVNTQLVNATLMNIADNPTDVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRM 173 Query: 248 EKFYWAPTRDDRIGV 204 EKFYW P RD+++G+ Sbjct: 174 EKFYWEPHRDEKVGI 188
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 31.6 bits (70), Expect = 1.0 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = -1 Query: 456 RWCG*XGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 331 RW G RNH + Q DG RHP H R H +A Q G Sbjct: 3554 RWSGSASRNHRGSAQEQSRDGSRHPTSHHEDRAGHGHSAESSRQSG 3599 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Frame = -1 Query: 456 RWCG*XGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 331 RW G RNH + Q DG RHP H+ R H +A Q G Sbjct: 2906 RWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSG 2951 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Frame = -1 Query: 456 RWCG*XGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 331 RW G RNH + Q DG RHP H+ R H +A Q G Sbjct: 2582 RWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSG 2627 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = -1 Query: 456 RWCG*XGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 331 RW G RNH + Q DG RHP H R H +A Q G Sbjct: 1933 RWSGSASRNHLGSAWEQSRDGSRHPGSHHEDRAGHGHSADSSRQSG 1978 Score = 30.0 bits (66), Expect = 2.9 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%) Frame = -1 Query: 456 RWCG*XGRNH--AVHRQQPDGERHPDEHR--RCPHQRAA 352 RW G RNH + Q DG RHP H R H +A Sbjct: 636 RWSGSASRNHHGSAQEQSRDGSRHPRSHHEDRAGHGHSA 674
>EPHB6_PANTR (P0C0K6) Ephrin type-B receptor 6 precursor (Tyrosine-protein| kinase-defective receptor EPH-6) Length = 1005 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Frame = +2 Query: 320 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPXY 445 GGSPP C G +W G RC G++ G C A R Y Sbjct: 262 GGSPPRLHCNGEGKWMVAVGGCRCQPGYQPARGDKACQACPRGLY 306
>EPHB6_HUMAN (O15197) Ephrin type-B receptor 6 precursor (Tyrosine-protein| kinase-defective receptor EPH-6) (HEP) Length = 1006 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Frame = +2 Query: 320 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPXY 445 GGSPP C G +W G RC G++ G C A R Y Sbjct: 263 GGSPPRLHCNGEGKWMVAVGGCRCQPGYQPARGDKACQACPRGLY 307
>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor| Length = 3695 Score = 30.8 bits (68), Expect = 1.7 Identities = 26/81 (32%), Positives = 31/81 (38%), Gaps = 6/81 (7%) Frame = +3 Query: 120 CRRRSLPLGRSSWHFGRCNLP-----ARXXYLADTDTVVTGGSPV-ELLHTTITDQRSVE 281 CRR P GR H GRCN P R + V G PV +H + D V Sbjct: 2114 CRRCQCPGGRCDPHTGRCNCPPGLSGERCDTCSQQHQVPVPGGPVGHSIHCEVCDHCVV- 2172 Query: 282 RREIVTGDDDGHTGVLLLVVH 344 + DD G LL +H Sbjct: 2173 ----LLLDDLERAGALLPAIH 2189
>MAGL2_HUMAN (Q9UJ55) MAGE-like protein 2 (Necdin-like protein 1) (Protein nM15)| Length = 529 Score = 29.6 bits (65), Expect = 3.8 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 2/80 (2%) Frame = +2 Query: 206 HRYGRHGWEPSRTSPYDHHGSEEXXXXXXXXXXXXWAHGGSPPCCTCQGAARWWGHR--R 379 H H W+ R P+++ + W H +P +G + W G R Sbjct: 181 HTLAFHDWQGPR--PWENLNLSDWEVQSPIQVSGDWEHPNTP-----RGLSGWEGPSTSR 233 Query: 380 CSSGWRSPSGC*RCTAWFRP 439 SGW PS +AW P Sbjct: 234 ILSGWEGPSASWALSAWEGP 253
>EPHB6_MOUSE (O08644) Ephrin type-B receptor 6 precursor (Tyrosine-protein| kinase-defective receptor EPH-6) (MEP) Length = 1014 Score = 29.3 bits (64), Expect = 5.0 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 3/39 (7%) Frame = +2 Query: 320 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTA 427 GGSPP C G RW G RC G + G C A Sbjct: 273 GGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQA 311
>EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-protein| kinase-defective receptor EPH-6) Length = 1013 Score = 29.3 bits (64), Expect = 5.0 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 3/39 (7%) Frame = +2 Query: 320 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTA 427 GGSPP C G RW G RC G + G C A Sbjct: 272 GGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQA 310
>LEP4_XANCP (Q56763) Type 4 prepilin-like proteins leader peptide-processing| enzyme [Includes: Leader peptidase (EC 3.4.23.43) (Prepilin peptidase); N-methyltransferase (EC 2.1.1.-)] Length = 287 Score = 28.9 bits (63), Expect = 6.6 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +1 Query: 292 SLPVTTMGTRGFSSLLYMPGSCTLVGASAMFIRVAFTIWLL 414 +LP+ +G G LYMP L+GA+ ++ + +T+W L Sbjct: 157 TLPLMWLGLVGSMDNLYMPAKPALLGAAVGYVSL-WTVWWL 196
>Y3433_MYCTU (O06250) Hypothetical protein Rv3433c/MT3539| Length = 473 Score = 28.5 bits (62), Expect = 8.6 Identities = 18/61 (29%), Positives = 27/61 (44%) Frame = -2 Query: 374 DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKV 195 D P V G+ ++P + V G + T+ P G + AP DDR+G C+ Sbjct: 316 DLPVLVDADGLTMLADHPDL---VAGRNAPTVLTP--HAGEFARLAGAPPGDDRVGACRQ 370 Query: 194 L 192 L Sbjct: 371 L 371
>PTRA_SALTY (Q8ZMB5) Protease 3 precursor (EC 3.4.24.55) (Protease III)| (Pitrilysin) (Protease pi) Length = 962 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 201 ADTDTVVTGGSPVELLHTTITDQRSVERREIV 296 AD+D +V G S V + T+TD+ R E+V Sbjct: 338 ADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369
>PTRA_SALTI (Q8Z418) Protease 3 precursor (EC 3.4.24.55) (Protease III)| (Pitrilysin) (Protease pi) Length = 962 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 201 ADTDTVVTGGSPVELLHTTITDQRSVERREIV 296 AD+D +V G S V + T+TD+ R E+V Sbjct: 338 ADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,592,394 Number of Sequences: 219361 Number of extensions: 1404753 Number of successful extensions: 3794 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3610 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3786 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
