Clone Name | rbasdm09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | FILA_MOUSE (P11088) Filaggrin (Fragment) | 29 | 8.5 | 2 | KNOB_PLAFG (P09346) Knob-associated histidine-rich protein precu... | 29 | 8.5 | 3 | KNOB_PLAFA (P13817) Knob-associated histidine-rich protein precu... | 29 | 8.5 |
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>FILA_MOUSE (P11088) Filaggrin (Fragment)| Length = 336 Score = 28.9 bits (63), Expect = 8.5 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +3 Query: 273 GRQLQQPHGHHHVHARLHQRQQP 341 G Q +Q GH H H H+ +QP Sbjct: 169 GHQHEQQRGHQHQHQHQHEHEQP 191
>KNOB_PLAFG (P09346) Knob-associated histidine-rich protein precursor (KAHRP)| (KP) Length = 634 Score = 28.9 bits (63), Expect = 8.5 Identities = 11/21 (52%), Positives = 11/21 (52%) Frame = +3 Query: 279 QLQQPHGHHHVHARLHQRQQP 341 Q Q H HHH H HQ Q P Sbjct: 58 QKQHEHHHHHHHQHQHQHQAP 78
>KNOB_PLAFA (P13817) Knob-associated histidine-rich protein precursor (KAHRP)| (HRPI) (Fragment) Length = 473 Score = 28.9 bits (63), Expect = 8.5 Identities = 11/21 (52%), Positives = 11/21 (52%) Frame = +3 Query: 279 QLQQPHGHHHVHARLHQRQQP 341 Q Q H HHH H HQ Q P Sbjct: 58 QKQHEHHHHHHHQHQHQHQAP 78 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,261,440 Number of Sequences: 219361 Number of extensions: 856186 Number of successful extensions: 2990 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2451 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2893 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)