ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasdl15 |
|---|---|
| Clone Library Name | barley_pub |
>VPS29_MOUSE (Q9QZ88) Vacuolar protein sorting 29 (Vesicle protein sorting 29)| Length = 182 Score = 215 bits (547), Expect = 1e-55 Identities = 95/152 (62%), Positives = 126/152 (82%) Frame = -2 Query: 680 IQHIICTGNLCIKEVHDYLKSLCPDLHITRGEYDEDARYPETKTVTIGQFKLGLCHGHQV 501 IQHI+CTGNLC KE +DYLK+L D+HI RG++DE+ YPE K VT+GQFK+GL HGHQV Sbjct: 31 IQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQV 90 Query: 500 VPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAHSSITYDVNPSF 321 +PWGD+ SLA+LQRQ DVDIL++GHTH+F+A++HE INPGSATGA++++ ++ PSF Sbjct: 91 IPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSF 150 Query: 320 VLMDIDGLRVVVYVYELIDGEVKVDKIDFKKT 225 VLMDI VV YVY+LI +VKV++I++KK+ Sbjct: 151 VLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182
>VPS29_HUMAN (Q9UBQ0) Vacuolar protein sorting 29 (Vesicle protein sorting 29)| (hVPS29) (PEP11) Length = 182 Score = 214 bits (546), Expect = 1e-55 Identities = 95/151 (62%), Positives = 125/151 (82%) Frame = -2 Query: 680 IQHIICTGNLCIKEVHDYLKSLCPDLHITRGEYDEDARYPETKTVTIGQFKLGLCHGHQV 501 IQHI+CTGNLC KE +DYLK+L D+HI RG++DE+ YPE K VT+GQFK+GL HGHQV Sbjct: 31 IQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQV 90 Query: 500 VPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAHSSITYDVNPSF 321 +PWGD+ SLA+LQRQ DVDIL++GHTH+F+A++HE INPGSATGA++++ ++ PSF Sbjct: 91 IPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSF 150 Query: 320 VLMDIDGLRVVVYVYELIDGEVKVDKIDFKK 228 VLMDI VV YVY+LI +VKV++I++KK Sbjct: 151 VLMDIQASTVVTYVYQLIGDDVKVERIEYKK 181
>PEP11_YEAST (P38759) Protein PEP11| Length = 282 Score = 72.8 bits (177), Expect = 9e-13 Identities = 49/128 (38%), Positives = 65/128 (50%), Gaps = 24/128 (18%) Frame = -2 Query: 635 HDYLK---SLCPDLHITRGEYDEDARYPETKT------------------VTIGQFKLGL 519 +D+LK + ++ I RGE+D + P TK + G K+G Sbjct: 45 YDFLKFVNQISNNITIVRGEFD-NGHLPSTKKDKASDNSRPMEEIPMNSIIRQGALKIGC 103 Query: 518 CHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAHSS--- 348 C G+ VVP D SL L RQLDVDIL+ G TH +AY EG +NPGS TGA ++ Sbjct: 104 CSGYTVVPKNDPLSLLALARQLDVDILLWGGTHNVEAYTLEGKFFVNPGSCTGAFNTDWP 163 Query: 347 ITYDVNPS 324 I +DV S Sbjct: 164 IVFDVEDS 171 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/42 (45%), Positives = 28/42 (66%) Frame = -2 Query: 353 SSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKK 228 S I +PSF L+DI G +Y+Y ++GEVKVDK+ ++K Sbjct: 240 SDINGSNSPSFCLLDIQGNTCTLYIYLYVNGEVKVDKVVYEK 281
>Y1774_METTH (O27802) Putative metallophosphoesterase MTH1774 (EC 3.1.4.-)| Length = 172 Score = 61.6 bits (148), Expect = 2e-09 Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 2/129 (1%) Frame = -2 Query: 680 IQHIICTGNLCIKEVHDYLKSLCPDLHITRGEYDED--ARYPETKTVTIGQFKLGLCHGH 507 ++ I+ G+L ++ L++L P + +G D P ++ I F++GL HG Sbjct: 29 VELILHAGDLTSPDILTELETLAP-VECVQGNMDRHYGIETPRSRLFEIESFRVGLIHG- 86 Query: 506 QVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAHSSITYDVNP 327 +V P GD L L +L D+L++GHTHQ + E V++NPGS T + +P Sbjct: 87 EVYPRGDTQQLRYLGLELGADVLISGHTHQPFIRELEDMVLLNPGSPT-----VPRLTDP 141 Query: 326 SFVLMDIDG 300 S +++ IDG Sbjct: 142 SVMVLRIDG 150
>Y623_METJA (Q58040) Putative metallophosphoesterase MJ0623 (EC 3.1.4.-)| Length = 192 Score = 56.6 bits (135), Expect = 7e-08 Identities = 35/103 (33%), Positives = 55/103 (53%) Frame = -2 Query: 671 IICTGNLCIKEVHDYLKSLCPDLHITRGEYDEDARYPETKTVTIGQFKLGLCHGHQVVPW 492 II G++ KE+ D LK L + + +G D P + + I K+G+ HG V P Sbjct: 65 IIHCGDVTDKEILDSLKDLAKVVAV-KGNMDY-LNLPRKEILEINDIKIGVIHGDVVYPR 122 Query: 491 GDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSAT 363 GD L +L +++ VD+L++GHTH +++NPGS T Sbjct: 123 GDRLKLRLLGKEMGVDVLISGHTHTPFIDDCRDILLLNPGSPT 165
>Y207_MYCGE (P47449) Putative metallophosphoesterase MG207 (EC 3.1.4.-)| Length = 163 Score = 34.7 bits (78), Expect = 0.28 Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 11/88 (12%) Frame = -2 Query: 560 ETKTVTIGQFKLGLCHGHQ-----VVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHE 396 E + +GQ L HGHQ + W L L + +Q D+L+ GH+H K Sbjct: 60 EIEIFQLGQINFVLMHGHQAPRDNLKKWYQL--LVLKAQQYPCDVLIFGHSHIEYTNKIN 117 Query: 395 GGVVINPGS------ATGAHSSITYDVN 330 +INPGS T S T+ VN Sbjct: 118 MIQLINPGSLQLPRNQTNTPSYCTFIVN 145
>YSNB_BACSU (P94559) Putative metallophosphoesterase ysnB (EC 3.1.4.-)| Length = 171 Score = 33.9 bits (76), Expect = 0.47 Identities = 20/77 (25%), Positives = 36/77 (46%) Frame = -2 Query: 599 ITRGEYDEDARYPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTH 420 + +G D + + +T G K+ + HGH L ++ +L D++ GH+H Sbjct: 52 VVKGNCDFAGDFKDELLLTAGSRKILVTHGHLHGIKQTLLNVYYRAEELGADVICFGHSH 111 Query: 419 QFKAYKHEGGVVINPGS 369 + G ++INPGS Sbjct: 112 IAGSEVLRGKLMINPGS 128
>YFCE_ECOLI (P67095) Phosphodiesterase yfcE (EC 3.1.4.-)| Length = 184 Score = 32.7 bits (73), Expect = 1.0 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 9/141 (6%) Frame = -2 Query: 641 EVHDYLKSLCPDLHITRGEYDEDA-----RYPET---KTVTIGQFKLGLCHGHQVVPWGD 486 +V + L + + RG D + +P T + V + + +L L HGH P Sbjct: 55 KVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGP--- 111 Query: 485 LDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAHSSITYDVNP-SFVLMD 309 ++L L + D+LV GHTH A + NPGS SI NP S+ ++D Sbjct: 112 -ENLPALNQN---DVLVYGHTHLPVAEQRGEIFHFNPGSV-----SIPKGGNPASYGMLD 162 Query: 308 IDGLRVVVYVYELIDGEVKVD 246 D L V+ + I +V ++ Sbjct: 163 NDVLSVIALNDQSIIAQVAIN 183
>YFCE_ECOL6 (P67096) Phosphodiesterase yfcE (EC 3.1.4.-)| Length = 184 Score = 32.7 bits (73), Expect = 1.0 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 9/141 (6%) Frame = -2 Query: 641 EVHDYLKSLCPDLHITRGEYDEDA-----RYPET---KTVTIGQFKLGLCHGHQVVPWGD 486 +V + L + + RG D + +P T + V + + +L L HGH P Sbjct: 55 KVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGP--- 111 Query: 485 LDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAHSSITYDVNP-SFVLMD 309 ++L L + D+LV GHTH A + NPGS SI NP S+ ++D Sbjct: 112 -ENLPALNQN---DVLVYGHTHLPVAEQRGEIFHFNPGSV-----SIPKGGNPASYGMLD 162 Query: 308 IDGLRVVVYVYELIDGEVKVD 246 D L V+ + I +V ++ Sbjct: 163 NDVLSVIALNDQSIIAQVAIN 183
>YFCE_ECO57 (P67097) Phosphodiesterase yfcE (EC 3.1.4.-)| Length = 184 Score = 32.7 bits (73), Expect = 1.0 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 9/141 (6%) Frame = -2 Query: 641 EVHDYLKSLCPDLHITRGEYDEDA-----RYPET---KTVTIGQFKLGLCHGHQVVPWGD 486 +V + L + + RG D + +P T + V + + +L L HGH P Sbjct: 55 KVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGP--- 111 Query: 485 LDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAHSSITYDVNP-SFVLMD 309 ++L L + D+LV GHTH A + NPGS SI NP S+ ++D Sbjct: 112 -ENLPALNQN---DVLVYGHTHLPVAEQRGEIFHFNPGSV-----SIPKGGNPASYGMLD 162 Query: 308 IDGLRVVVYVYELIDGEVKVD 246 D L V+ + I +V ++ Sbjct: 163 NDVLSVIALNDQSIIAQVAIN 183
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 31.6 bits (70), Expect = 2.3 Identities = 20/51 (39%), Positives = 25/51 (49%) Frame = -3 Query: 445 TSSSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTSTRASCSWTLMASV 293 TSSSP T SS S+ +SST A + T+ S TST S S+ Sbjct: 208 TSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTSTATVTSTPSSTSI 258
>PCP_MYCTU (P0A5R4) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)| (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase) Length = 222 Score = 31.6 bits (70), Expect = 2.3 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = -1 Query: 549 SYYWPVQARAMPWPSGCSMGRPGLPSDASAAAG---CGHPRHRA--HPSVQGLQARGGCR 385 +Y+ V RAM +M + G+P+D S AAG C H + H + +GL R G Sbjct: 114 AYHATVPVRAMV----LAMRKAGVPADVSDAAGTFVCNHLMYGVLHHLAQKGLPVRAGWI 169 Query: 384 HQPWLSHGRPQQHHI 340 H P L H++ Sbjct: 170 HLPCLPSVAALDHNL 184
>PCP_MYCBO (P0A5R5) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)| (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase) Length = 222 Score = 31.6 bits (70), Expect = 2.3 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = -1 Query: 549 SYYWPVQARAMPWPSGCSMGRPGLPSDASAAAG---CGHPRHRA--HPSVQGLQARGGCR 385 +Y+ V RAM +M + G+P+D S AAG C H + H + +GL R G Sbjct: 114 AYHATVPVRAMV----LAMRKAGVPADVSDAAGTFVCNHLMYGVLHHLAQKGLPVRAGWI 169 Query: 384 HQPWLSHGRPQQHHI 340 H P L H++ Sbjct: 170 HLPCLPSVAALDHNL 184
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 31.2 bits (69), Expect = 3.1 Identities = 24/71 (33%), Positives = 24/71 (33%) Frame = -1 Query: 507 SGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQPWLSHGRPQQHHI*RQP 328 SG S RP AG GH H G GG R HG P H P Sbjct: 808 SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMG--GSGGHRPHEGPGHGGPHGHRPHDVP 865 Query: 327 ELRAHGH*WPP 295 R H H PP Sbjct: 866 GHRGHDHRGPP 876
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) Length = 940 Score = 31.2 bits (69), Expect = 3.1 Identities = 24/71 (33%), Positives = 24/71 (33%) Frame = -1 Query: 507 SGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQPWLSHGRPQQHHI*RQP 328 SG S RP AG GH H G GG R HG P H P Sbjct: 809 SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMG--GSGGHRPHEGPGHGGPHGHRPHDVP 866 Query: 327 ELRAHGH*WPP 295 R H H PP Sbjct: 867 GHRGHDHRGPP 877
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 31.2 bits (69), Expect = 3.1 Identities = 24/71 (33%), Positives = 24/71 (33%) Frame = -1 Query: 507 SGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQPWLSHGRPQQHHI*RQP 328 SG S RP AG GH H G GG R HG P H P Sbjct: 808 SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMG--GSGGHRPHEGPGHGGPHGHRPHDVP 865 Query: 327 ELRAHGH*WPP 295 R H H PP Sbjct: 866 GHRGHDHRGPP 876
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 31.2 bits (69), Expect = 3.1 Identities = 19/54 (35%), Positives = 21/54 (38%) Frame = -1 Query: 537 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 376 P AR P G S G PG P A AA G+P P +G G P Sbjct: 346 PQGARGSEGPQG-SRGEPGPPGPAGAAGPAGNPGADGQPGAKGATGAPGIAGAP 398
>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor| Length = 1685 Score = 31.2 bits (69), Expect = 3.1 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 2/44 (4%) Frame = -1 Query: 516 PWPSGCS--MGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGG 391 P P G S G PGLP + G GHP P +G + G Sbjct: 1130 PGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDG 1173
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 31.2 bits (69), Expect = 3.1 Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 1/71 (1%) Frame = -1 Query: 504 GCSMGRPGLPSDASAAAGCGHPRHRAHPSVQG-LQARGGCRHQPWLSHGRPQQHHI*RQP 328 G MG P + G HR H G + A GG R HG P H P Sbjct: 791 GGGMGGGHRPHEGPGGGMGGGSGHRPHEGPGGGMGAGGGHRPHEGPGHGGPHGHRPHDVP 850 Query: 327 ELRAHGH*WPP 295 R H H PP Sbjct: 851 GHRGHDHRGPP 861
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 31.2 bits (69), Expect = 3.1 Identities = 20/50 (40%), Positives = 29/50 (58%) Frame = -3 Query: 445 TSSSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTSTRASCSWTLMAS 296 ++SS T SS TST SSST P + + +S +TST +S + T +S Sbjct: 204 STSSSSTSTSSSSTSTS--SSSTSTSPSSTSTSSSLTSTSSSSTSTSQSS 251
>HIW_DROME (Q9NB71) Ubiquitin ligase protein highwire (EC 6.3.2.-) (Protein| pam/highwire/rpm-1) Length = 5233 Score = 30.8 bits (68), Expect = 4.0 Identities = 21/64 (32%), Positives = 27/64 (42%) Frame = -1 Query: 486 PGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQPWLSHGRPQQHHI*RQPELRAHGH 307 PG + AS G HR++ QG + H P H QQHH +Q L+ H Sbjct: 3874 PGTTAAASVGGGNLSKFHRSYSMGQGWASLAQHNHPP--PHHPQQQHHQQQQMNLQLQQH 3931 Query: 306 *WPP 295 PP Sbjct: 3932 QAPP 3935
>P936_METJA (Q58346) Phosphodiesterase MJ0936 (EC 3.1.4.-)| Length = 166 Score = 30.8 bits (68), Expect = 4.0 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = -2 Query: 551 TVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPG 372 +V I K + HGH L M + D+++ GHTH+ + + +VINPG Sbjct: 85 SVEIDDLKFFITHGHHQ------SVLEMAIKSGLYDVVIYGHTHERVFEEVDDVLVINPG 138 Query: 371 SATG 360 G Sbjct: 139 ECCG 142
>MDFI_MOUSE (P70331) MyoD family inhibitor (Myogenic repressor I-mf)| Length = 251 Score = 30.4 bits (67), Expect = 5.2 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 9/86 (10%) Frame = -1 Query: 510 PSGCS---MGRPGLPSDASAAAGCGHPRHR---AHPSV---QGLQARGGCRHQPWLSHGR 358 P+G S + PG A A G HR HPS+ G ++RG R + Sbjct: 100 PNGSSHDHLSEPGSAGHAGNGALGGSKAHRKLQTHPSLGSQAGRKSRGSARSASQV---- 155 Query: 357 PQQHHI*RQPELRAHGH*WPPCCCLR 280 P Q + P +R H P CCLR Sbjct: 156 PLQAQEGKAPAVRIHRQTASPTCCLR 181
>AKR1_USTMA (Q4P6L3) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Ankyrin| repeat-containing protein AKR1) Length = 844 Score = 30.4 bits (67), Expect = 5.2 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -3 Query: 439 SSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTSTRASCSW 311 ++PGTP+SS ++T+ +S ST+ P P +S SW Sbjct: 2 AAPGTPLSS--SATQAISVSTVDAPSDPLLSSQSAQLDGHSSW 42
>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)| (Ath-ExpAlpha-1.19) Length = 312 Score = 30.4 bits (67), Expect = 5.2 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = -1 Query: 477 PSDASAAAGCGHPRHRAHPSVQGLQARGG-CRHQPWLSHGR 358 PS + + HP H AHPS L + GG H W HGR Sbjct: 55 PSHGAHPSHGAHPSHGAHPSHGALPSHGGQVPHSGW-GHGR 94
>RECF_SYNPX (Q7U4L8) DNA replication and repair protein recF| Length = 365 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 156 RKNKNKQDRISVMWKAPSAMHRGGLLEVDLVNLHL 260 R ++ QDR + W+AP A+ R GL + D + L L Sbjct: 43 RSHRCSQDRDLIQWEAPRALLRAGLDDGDQLELEL 77
>HXD13_MOUSE (P70217) Homeobox protein Hox-D13 (Hox-4.8)| Length = 339 Score = 30.0 bits (66), Expect = 6.8 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = -1 Query: 537 PVQARAMPWPSGCSMGRPGLPS--DASAAAGCGHPRHRAHPSVQGLQA---RGGCRHQPW 373 P +A+ + + G + +P D + G G PRH A+ S++G Q+ G Q + Sbjct: 180 PARAKEVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVY 239 Query: 372 LSHGRPQQHH 343 + +PQ H Sbjct: 240 CAKDQPQGSH 249
>CO4A2_CAEEL (P17140) Collagen alpha-2(IV) chain precursor (Lethal protein 2)| Length = 1758 Score = 30.0 bits (66), Expect = 6.8 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = -1 Query: 492 GRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGG 391 G+PG+P G G P P + GL+ GG Sbjct: 1346 GQPGIPGLKGEVGGAGLPGQPGFPGIPGLKGEGG 1379
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 30.0 bits (66), Expect = 6.8 Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -3 Query: 445 TSSSPGTPI-SSRPTSTRGVSSSTLA-QPRAPTAASHMTSTRASCS 314 TSSSP T +S P+ST SSST A AP+ AS TS S S Sbjct: 60 TSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTS 105
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.0 bits (66), Expect = 6.8 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Frame = -3 Query: 535 SSS*GYAMAIRLFHGATWTP*RCF---SGSWMWTSSSPGTPISSR--PTSTRGVSSSTLA 371 SSS G A+ ++ T TP SGS + SS PGT ++R T+T V++ ++A Sbjct: 4547 SSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGTTHTARVLTTTTTTVATGSMA 4606 Query: 370 QPRAPTAASHMTSTRASCSWTLMAS 296 P + T S + + + T+ A+ Sbjct: 4607 TPSSSTQTSGTPPSLTTTATTITAT 4631
>HXD13_CARPS (Q5EU41) Homeobox protein Hox-D13| Length = 333 Score = 30.0 bits (66), Expect = 6.8 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = -1 Query: 537 PVQARAMPWPSGCSMGRPGLPS--DASAAAGCGHPRHRAHPSVQGLQA---RGGCRHQPW 373 P +A+ + + G + +P D + G G PRH A+ S++G Q+ G Q + Sbjct: 174 PARAKEVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVY 233 Query: 372 LSHGRPQQHH 343 + +PQ H Sbjct: 234 CAKDQPQGSH 243
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 30.0 bits (66), Expect = 6.8 Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -3 Query: 445 TSSSPGTPI-SSRPTSTRGVSSSTLA-QPRAPTAASHMTSTRASCS 314 TSSSP T +S P+ST SSST A AP+ AS TS S S Sbjct: 60 TSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTS 105
>HXD13_HUMAN (P35453) Homeobox protein Hox-D13 (Hox-4I)| Length = 335 Score = 30.0 bits (66), Expect = 6.8 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = -1 Query: 537 PVQARAMPWPSGCSMGRPGLPS--DASAAAGCGHPRHRAHPSVQGLQA---RGGCRHQPW 373 P +A+ + + G + +P D + G G PRH A+ S++G Q+ G Q + Sbjct: 176 PARAKEVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVY 235 Query: 372 LSHGRPQQHH 343 + +PQ H Sbjct: 236 CTKDQPQGSH 245
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 8.9 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = -1 Query: 537 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 376 P AR P G G PG P A AA G+P P +G G P Sbjct: 346 PQGARGSEGPQGVR-GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP 398
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 8.9 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = -1 Query: 537 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 376 P AR P G G PG P A AA G+P P +G G P Sbjct: 346 PQGARGSEGPQGVR-GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP 398
>Y126_MYCPN (P75349) Putative metallophosphoesterase MG207 homolog (EC 3.1.4.-)| (C09_orf159) Length = 159 Score = 29.6 bits (65), Expect = 8.9 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = -2 Query: 521 LCHGHQVVPWGDLDS----LAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGS 369 L HGHQ P DL L + D+L+ GH+H +G VINPGS Sbjct: 73 LMHGHQA-PRHDLKQWYKMLVDQAKSYLCDVLIVGHSHIEHYETIDGIQVINPGS 126
>SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)| Length = 586 Score = 29.6 bits (65), Expect = 8.9 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Frame = -3 Query: 505 RLFHGATWTP*RCFSGSWMWTSSSPGTPISSRPTSTR---GVSSSTLAQPRAPTAA 347 RL G + P S S +SS+P P PTST+ SS++LA+P+AP AA Sbjct: 477 RLPSGPSLPPSSSSSSSSSSSSSAPQRP--GGPTSTQVNASSSSNSLAEPQAPQAA 530
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 29.6 bits (65), Expect = 8.9 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = -3 Query: 445 TSSSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTSTRAS 320 TSS+P TP S+ TST SST + T+A T+ + S Sbjct: 673 TSSTPSTPSSTLSTSTVTEPSSTRSSDSTTTSAGSTTTLQES 714
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 29.6 bits (65), Expect = 8.9 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = -1 Query: 537 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 376 P AR P G G PG P A AA G+P P +G G P Sbjct: 353 PQGARGSEGPQGVR-GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP 405
>ILA1_CAEEL (Q21507) Probable insulin-like peptide alpha-type 1 precursor| Length = 89 Score = 29.6 bits (65), Expect = 8.9 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Frame = -2 Query: 653 LCIKEVHDYLKSLCPDLHITRGEYDE-DARYPETKTVTIGQF-KLG 522 LC + +++ +CPD+ +T G+ ++ YP K V + +F K+G Sbjct: 31 LCATKAVKHIRKVCPDMCLTGGKIEKFPVFYPNFKEVEVNEFCKMG 76 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,259,089 Number of Sequences: 219361 Number of extensions: 2231619 Number of successful extensions: 7928 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 6892 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7859 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
