ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasdj22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103700.1| Zea mays PCO104752 mRNA sequence Length = 837 Score = 490 bits (247), Expect = e-135 Identities = 426/483 (88%), Gaps = 2/483 (0%) Strand = Plus / Minus Query: 173 tgcttcctccgtcttcggtgggcctttccacttaaagttctctgcgtacgttttgggctt 232 ||||| ||||| ||||| |||||| ||||||| |||||||| ||||| | || ||| | Sbjct: 583 tgcttgctccgctttcggagggcctctccacttgaagttctcagcgtaggccttaggcct 524 Query: 233 cagaagaggtgtgtggcgcttcctaaccacatattcccatccatgtttgtcagcaaatgc 292 ||||||||||| ||||| |||| ||||||||| | |||||||||||| || ||||| || Sbjct: 523 cagaagaggtgcatggcgtttccgaaccacataattccatccatgtttttcggcaaacgc 464 Query: 293 ctttgctgactcggcactgtcaaacgtaagtccagcttcaccaacattagcatacggatc 352 |||||||||||| |||||||||||||||||||| |||||||| ||||||||||| ||||| Sbjct: 463 ctttgctgactctgcactgtcaaacgtaagtcctgcttcaccgacattagcatatggatc 404 Query: 353 accagtcgatgtccatcccatcaatgggttctcccacttttgggttgacacgaaattgat 412 ||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||| || Sbjct: 403 cccagtagatgtccatcccatcaacgggttctcccacttttgggttgacaaaaaattaat 344 Query: 413 tttccacctcccgactttgcctgaaccttgctgagatgcagtcctggctggtgaatagat 472 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || Sbjct: 343 tttccacctcccgactttgcctgaaccttgctgggatgcagtcctagctggtgaataaat 284 Query: 473 tagaaccttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcg 532 ||||||||| |||||||| |||||||| ||||| ||||||||||| |||||||||||| | Sbjct: 283 tagaaccttacggcggagatgctcctcagggatgccggagaccatcccgatctccccggg 224 Query: 533 cttgatctccacgagggcatcggaggcctccgcggagagcatccgcgcccggcgtaggcg 592 ||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| |||| Sbjct: 223 cttgatctcaacgagggcatcagaggcctccgcggagagcatccgcg-ccggcgccggcg 165 Query: 593 agagaagagcccggccgagggagggggaagacccgccggagtggggcggccatcgcgtcg 652 |||||| || || || ||||| ||||| | ||||||||| |||||||||||| || || Sbjct: 164 tgagaagcgcgcgaccaaggga-ggggaggctccgccggagcggggcggccatctcggcg 106 Query: 653 gag 655 ||| Sbjct: 105 gag 103
>dbj|AK105064.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E08, full insert sequence Length = 848 Score = 480 bits (242), Expect = e-132 Identities = 347/382 (90%) Strand = Plus / Minus Query: 199 tccacttaaagttctctgcgtacgttttgggcttcagaagaggtgtgtggcgcttcctaa 258 ||||||| ||||||||||| || | ||||| ||||| |||| |||| ||||| ||||||| Sbjct: 560 tccacttgaagttctctgcataagatttggccttcaaaagaagtgtatggcgtttcctaa 501 Query: 259 ccacatattcccatccatgtttgtcagcaaatgcctttgctgactcggcactgtcaaacg 318 ||||||| ||||||||||| || |||||||||||||||||||| || ||||||||||||| Sbjct: 500 ccacataatcccatccatgcttttcagcaaatgcctttgctgaatctgcactgtcaaacg 441 Query: 319 taagtccagcttcaccaacattagcatacggatcaccagtcgatgtccatcccatcaatg 378 |||| || |||||||||||||||||||| ||||| ||||| |||||||||||||| |||| Sbjct: 440 taagccctgcttcaccaacattagcatatggatctccagtagatgtccatcccattaatg 381 Query: 379 ggttctcccacttttgggttgacacgaaattgattttccacctcccgactttgcctgaac 438 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 380 ggttctcccacttttgggttgacacaaagttgattttccacctcccgactttgcctgaac 321 Query: 439 cttgctgagatgcagtcctggctggtgaatagattagaaccttgcggcggaggtgctcct 498 | ||||||||||||||||| || |||||||| |||| ||||||||||||||||||||||| Sbjct: 320 cctgctgagatgcagtcctagcgggtgaatatattacaaccttgcggcggaggtgctcct 261 Query: 499 cggggatcccggagaccatgccgatctccccgcgcttgatctccacgagggcatcggagg 558 ||||||| |||||||||||||||||||| || |||||||||| |||||||| ||||| | Sbjct: 260 cggggatgccggagaccatgccgatctcgcctggcttgatctcgacgagggcgtcggacg 201 Query: 559 cctccgcggagagcatccgcgc 580 || ||||||||||||||||||| Sbjct: 200 ccgccgcggagagcatccgcgc 179 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 625 ccgccggagtggggcggccatcgcgtcggagccgtgcgccgg 666 ||||||||| |||||||||||| |||||||||||| |||||| Sbjct: 130 ccgccggagcggggcggccatctcgtcggagccgtacgccgg 89
>dbj|AK066419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066N17, full insert sequence Length = 820 Score = 480 bits (242), Expect = e-132 Identities = 347/382 (90%) Strand = Plus / Minus Query: 199 tccacttaaagttctctgcgtacgttttgggcttcagaagaggtgtgtggcgcttcctaa 258 ||||||| ||||||||||| || | ||||| ||||| ||||||||| ||||| ||||||| Sbjct: 540 tccacttgaagttctctgcataagatttggccttcaaaagaggtgtatggcgtttcctaa 481 Query: 259 ccacatattcccatccatgtttgtcagcaaatgcctttgctgactcggcactgtcaaacg 318 ||||||| ||||||||||| || |||||||||||||||||||| || || |||||||||| Sbjct: 480 ccacataatcccatccatgcttttcagcaaatgcctttgctgaatctgctctgtcaaacg 421 Query: 319 taagtccagcttcaccaacattagcatacggatcaccagtcgatgtccatcccatcaatg 378 |||| || |||||||||||||||||||| ||||| ||||| |||||||||||||| |||| Sbjct: 420 taagccctgcttcaccaacattagcatatggatctccagtagatgtccatcccattaatg 361 Query: 379 ggttctcccacttttgggttgacacgaaattgattttccacctcccgactttgcctgaac 438 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 360 ggttctcccacttttgggttgacacaaagttgattttccacctcccgactttgcctgaac 301 Query: 439 cttgctgagatgcagtcctggctggtgaatagattagaaccttgcggcggaggtgctcct 498 | ||||||||||||||||| || |||||||| |||| ||||||||||||||||||||||| Sbjct: 300 cctgctgagatgcagtcctagcgggtgaatatattacaaccttgcggcggaggtgctcct 241 Query: 499 cggggatcccggagaccatgccgatctccccgcgcttgatctccacgagggcatcggagg 558 ||||||| |||||||||||||||||||| || |||||||||| |||||||| ||||| | Sbjct: 240 cggggatgccggagaccatgccgatctcgcctggcttgatctcgacgagggcgtcggacg 181 Query: 559 cctccgcggagagcatccgcgc 580 || ||||||||||||||||||| Sbjct: 180 ccgccgcggagagcatccgcgc 159 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 625 ccgccggagtggggcggccatcgcgtcggagccgtgcgccgg 666 ||||||||| |||||||||||| |||||||||||| |||||| Sbjct: 110 ccgccggagcggggcggccatctcgtcggagccgtacgccgg 69
>gb|BT019233.1| Zea mays clone Contig906.F mRNA sequence Length = 1470 Score = 474 bits (239), Expect = e-130 Identities = 398/451 (88%), Gaps = 5/451 (1%) Strand = Plus / Plus Query: 173 tgcttcctccgtcttcggtgggcctttccacttaaagttctctgcgtacgttttgggctt 232 ||||| ||||| |||||| |||||||||||||| |||||||| ||||| | || ||||| Sbjct: 997 tgcttgctccgccttcggggggcctttccacttgaagttctcagcgtaggccttaggctt 1056 Query: 233 cagaagaggtgtgtggcgcttcctaaccacatattcccatccatgtttgtcagcaaatgc 292 |||||||||||| || || |||| |||||||| | |||||||||||| ||||||||||| Sbjct: 1057 cagaagaggtgtatgccgtttccgtaccacataattccatccatgtttttcagcaaatgc 1116 Query: 293 ctttgctgactcggcactgtcaaacgtaagtccagcttcaccaacattagcatacggatc 352 ||||||||||| ||||||| || |||||||| |||||||| ||||||||||| ||||| Sbjct: 1117 ttttgctgactccgcactgttgaatgtaagtcctgcttcaccgacattagcatatggatc 1176 Query: 353 accagtcgatgtccatcccatcaatgggttctcccacttttgggttgacacgaaattgat 412 ||||| ||||||||||||||||| ||||||||||||||||||||||||| || || || Sbjct: 1177 cccagtagatgtccatcccatcaacgggttctcccacttttgggttgacaaaaagttaat 1236 Query: 413 tttccacctcccgactttgcctgaaccttgctgagatgcagtcctggctggtgaatagat 472 |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 1237 tttccacctcccaactttgcctgaaccttgctgagatgcagtcctagctggtgaataaat 1296 Query: 473 tagaaccttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcg 532 || |||||| ||||||||||||||||||||||| ||||||||||| || ||||||||| | Sbjct: 1297 tacaaccttacggcggaggtgctcctcggggatgccggagaccatcccaatctccccggg 1356 Query: 533 cttgatctccacgagggcatcggaggcctccgcggagagcatccgcgcc-----cggcgt 587 ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1357 cttgatctcaacgagggcatcggaggcctccgcggagagcgtccgcgccggcgccggcgc 1416 Query: 588 aggcgagagaagagcccggccgagggagggg 618 |||| |||||| || ||||||||||||||| Sbjct: 1417 cggcgtgagaagcgcgcggccgagggagggg 1447
>ref|XM_478918.1| Oryza sativa (japonica cultivar-group), mRNA Length = 438 Score = 468 bits (236), Expect = e-128 Identities = 323/352 (91%) Strand = Plus / Minus Query: 229 gcttcagaagaggtgtgtggcgcttcctaaccacatattcccatccatgtttgtcagcaa 288 |||||| ||||||||| ||||| |||||||||||||| ||||||||||| || ||||||| Sbjct: 421 gcttcaaaagaggtgtatggcgtttcctaaccacataatcccatccatgcttttcagcaa 362 Query: 289 atgcctttgctgactcggcactgtcaaacgtaagtccagcttcaccaacattagcatacg 348 ||||||||||||| || ||||||||||||||||| || |||||||||||||||||||| | Sbjct: 361 atgcctttgctgaatctgcactgtcaaacgtaagccctgcttcaccaacattagcatatg 302 Query: 349 gatcaccagtcgatgtccatcccatcaatgggttctcccacttttgggttgacacgaaat 408 |||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct: 301 gatctccagtagatgtccatcccattaatgggttctcccacttttgggttgacacaaagt 242 Query: 409 tgattttccacctcccgactttgcctgaaccttgctgagatgcagtcctggctggtgaat 468 ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| Sbjct: 241 tgattttccacctcccgactttgcctgaaccctgctgagatgcagtcctagcgggtgaat 182 Query: 469 agattagaaccttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccc 528 | |||| |||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 181 atattacaaccttgcggcggaggtgctcctcggggatgccggagaccatgccgatctcgc 122 Query: 529 cgcgcttgatctccacgagggcatcggaggcctccgcggagagcatccgcgc 580 | |||||||||| |||||||| ||||| ||| ||||||||||||||||||| Sbjct: 121 ctggcttgatctcgacgagggcgtcggacgccgccgcggagagcatccgcgc 70
>gb|BT018421.1| Zea mays clone EL01N0360A04.d mRNA sequence Length = 1896 Score = 432 bits (218), Expect = e-118 Identities = 350/394 (88%), Gaps = 5/394 (1%) Strand = Plus / Plus Query: 230 cttcagaagaggtgtgtggcgcttcctaaccacatattcccatccatgtttgtcagcaaa 289 ||||||||||||||| || || |||| |||||||| | |||||||||||| |||||||| Sbjct: 1473 cttcagaagaggtgtatgccgtttccgtaccacataattccatccatgtttttcagcaaa 1532 Query: 290 tgcctttgctgactcggcactgtcaaacgtaagtccagcttcaccaacattagcatacgg 349 ||| ||||||||||| ||||||| || |||||||| |||||||| ||||||||||| || Sbjct: 1533 tgcttttgctgactccgcactgttgaatgtaagtcctgcttcaccgacattagcatatgg 1592 Query: 350 atcaccagtcgatgtccatcccatcaatgggttctcccacttttgggttgacacgaaatt 409 ||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| || || Sbjct: 1593 atccccagtagatgtccatcccatcaacgggttctcccacttttgggttgacaaaaagtt 1652 Query: 410 gattttccacctcccgactttgcctgaaccttgctgagatgcagtcctggctggtgaata 469 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1653 aattttccacctcccaactttgcctgaaccttgctgagatgcagtcctagctggtgaata 1712 Query: 470 gattagaaccttgcggcggaggtgctcctcggggatcccggagaccatgccgatctcccc 529 |||| |||||| ||||||||||||||||||||||| ||||||||||| || |||||||| Sbjct: 1713 aattacaaccttacggcggaggtgctcctcggggatgccggagaccatcccaatctcccc 1772 Query: 530 gcgcttgatctccacgagggcatcggaggcctccgcggagagcatccgcgcc-----cgg 584 | |||||||||| |||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 1773 gggcttgatctcaacgagggcatcggaggcctccgcggagagcgtccgcgccggcgccgg 1832 Query: 585 cgtaggcgagagaagagcccggccgagggagggg 618 || |||| |||||| || ||||||||||||||| Sbjct: 1833 cgccggcgtgagaagcgcgcggccgagggagggg 1866 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 173 tgcttcctccgtcttcggtgggcctttccacttaaagttctctgcgta 220 ||||| ||||| |||||| |||||||||||||| |||||||| ||||| Sbjct: 261 tgcttgctccgccttcggggggcctttccacttgaagttctcagcgta 308
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 174 bits (88), Expect = 2e-40 Identities = 121/132 (91%) Strand = Plus / Plus Query: 258 accacatattcccatccatgtttgtcagcaaatgcctttgctgactcggcactgtcaaac 317 |||||||| ||||||||||| || |||||||||||||||||||| || |||||||||||| Sbjct: 23746846 accacataatcccatccatgcttttcagcaaatgcctttgctgaatctgcactgtcaaac 23746905 Query: 318 gtaagtccagcttcaccaacattagcatacggatcaccagtcgatgtccatcccatcaat 377 ||||| || |||||||||||||||||||| ||||| ||||| |||||||||||||| ||| Sbjct: 23746906 gtaagccctgcttcaccaacattagcatatggatctccagtagatgtccatcccattaat 23746965 Query: 378 gggttctcccac 389 |||||||||||| Sbjct: 23746966 gggttctcccac 23746977 Score = 143 bits (72), Expect = 9e-31 Identities = 96/104 (92%) Strand = Plus / Plus Query: 477 accttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcgcttg 536 ||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 23748793 accttgcggcggaggtgctcctcggggatgccggagaccatgccgatctcgcctggcttg 23748852 Query: 537 atctccacgagggcatcggaggcctccgcggagagcatccgcgc 580 ||||| |||||||| ||||| ||| ||||||||||||||||||| Sbjct: 23748853 atctcgacgagggcgtcggacgccgccgcggagagcatccgcgc 23748896 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Plus Query: 388 acttttgggttgacacgaaattgattttccacctcccgactttgcctgaaccttgctgag 447 |||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 23747429 acttttgggttgacacaaagttgattttccacctcccgactttgcctgaaccctgctgag 23747488 Query: 448 atgcagtcctggctggtgaatagattagaacct 480 |||||||||| || |||||||| |||| ||||| Sbjct: 23747489 atgcagtcctagcgggtgaatatattacaacct 23747521 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 625 ccgccggagtggggcggccatcgcgtcggagccgtgcgccgg 666 ||||||||| |||||||||||| |||||||||||| |||||| Sbjct: 23748945 ccgccggagcggggcggccatctcgtcggagccgtacgccgg 23748986
>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1060_D03 Length = 102178 Score = 174 bits (88), Expect = 2e-40 Identities = 121/132 (91%) Strand = Plus / Plus Query: 258 accacatattcccatccatgtttgtcagcaaatgcctttgctgactcggcactgtcaaac 317 |||||||| ||||||||||| || |||||||||||||||||||| || |||||||||||| Sbjct: 91460 accacataatcccatccatgcttttcagcaaatgcctttgctgaatctgcactgtcaaac 91519 Query: 318 gtaagtccagcttcaccaacattagcatacggatcaccagtcgatgtccatcccatcaat 377 ||||| || |||||||||||||||||||| ||||| ||||| |||||||||||||| ||| Sbjct: 91520 gtaagccctgcttcaccaacattagcatatggatctccagtagatgtccatcccattaat 91579 Query: 378 gggttctcccac 389 |||||||||||| Sbjct: 91580 gggttctcccac 91591 Score = 143 bits (72), Expect = 9e-31 Identities = 96/104 (92%) Strand = Plus / Plus Query: 477 accttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcgcttg 536 ||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 93407 accttgcggcggaggtgctcctcggggatgccggagaccatgccgatctcgcctggcttg 93466 Query: 537 atctccacgagggcatcggaggcctccgcggagagcatccgcgc 580 ||||| |||||||| ||||| ||| ||||||||||||||||||| Sbjct: 93467 atctcgacgagggcgtcggacgccgccgcggagagcatccgcgc 93510 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Plus Query: 388 acttttgggttgacacgaaattgattttccacctcccgactttgcctgaaccttgctgag 447 |||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 92043 acttttgggttgacacaaagttgattttccacctcccgactttgcctgaaccctgctgag 92102 Query: 448 atgcagtcctggctggtgaatagattagaacct 480 |||||||||| || |||||||| |||| ||||| Sbjct: 92103 atgcagtcctagcgggtgaatatattacaacct 92135 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 625 ccgccggagtggggcggccatcgcgtcggagccgtgcgccgg 666 ||||||||| |||||||||||| |||||||||||| |||||| Sbjct: 93559 ccgccggagcggggcggccatctcgtcggagccgtacgccgg 93600
>dbj|AP005437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1113_E01 Length = 73706 Score = 174 bits (88), Expect = 2e-40 Identities = 121/132 (91%) Strand = Plus / Plus Query: 258 accacatattcccatccatgtttgtcagcaaatgcctttgctgactcggcactgtcaaac 317 |||||||| ||||||||||| || |||||||||||||||||||| || |||||||||||| Sbjct: 1776 accacataatcccatccatgcttttcagcaaatgcctttgctgaatctgcactgtcaaac 1835 Query: 318 gtaagtccagcttcaccaacattagcatacggatcaccagtcgatgtccatcccatcaat 377 ||||| || |||||||||||||||||||| ||||| ||||| |||||||||||||| ||| Sbjct: 1836 gtaagccctgcttcaccaacattagcatatggatctccagtagatgtccatcccattaat 1895 Query: 378 gggttctcccac 389 |||||||||||| Sbjct: 1896 gggttctcccac 1907 Score = 143 bits (72), Expect = 9e-31 Identities = 96/104 (92%) Strand = Plus / Plus Query: 477 accttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcgcttg 536 ||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 3723 accttgcggcggaggtgctcctcggggatgccggagaccatgccgatctcgcctggcttg 3782 Query: 537 atctccacgagggcatcggaggcctccgcggagagcatccgcgc 580 ||||| |||||||| ||||| ||| ||||||||||||||||||| Sbjct: 3783 atctcgacgagggcgtcggacgccgccgcggagagcatccgcgc 3826 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Plus Query: 388 acttttgggttgacacgaaattgattttccacctcccgactttgcctgaaccttgctgag 447 |||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 2359 acttttgggttgacacaaagttgattttccacctcccgactttgcctgaaccctgctgag 2418 Query: 448 atgcagtcctggctggtgaatagattagaacct 480 |||||||||| || |||||||| |||| ||||| Sbjct: 2419 atgcagtcctagcgggtgaatatattacaacct 2451 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 625 ccgccggagtggggcggccatcgcgtcggagccgtgcgccgg 666 ||||||||| |||||||||||| |||||||||||| |||||| Sbjct: 3875 ccgccggagcggggcggccatctcgtcggagccgtacgccgg 3916
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 111 bits (56), Expect = 3e-21 Identities = 92/104 (88%) Strand = Plus / Minus Query: 477 accttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcgcttg 536 |||||||||||||||||||||| |||||| ||||||||||||| ||||| || ||||| Sbjct: 2856729 accttgcggcggaggtgctccttggggatgccggagaccatgcttatctcgcctggcttg 2856670 Query: 537 atctccacgagggcatcggaggcctccgcggagagcatccgcgc 580 ||||| |||||||| ||||| || ||||||||||||||||||| Sbjct: 2856669 atctcgacgagggcgtcggacgctgccgcggagagcatccgcgc 2856626
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 111 bits (56), Expect = 3e-21 Identities = 92/104 (88%) Strand = Plus / Minus Query: 477 accttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcgcttg 536 |||||||||||||||||||||| |||||| ||||||||||||| ||||| || ||||| Sbjct: 2856673 accttgcggcggaggtgctccttggggatgccggagaccatgcttatctcgcctggcttg 2856614 Query: 537 atctccacgagggcatcggaggcctccgcggagagcatccgcgc 580 ||||| |||||||| ||||| || ||||||||||||||||||| Sbjct: 2856613 atctcgacgagggcgtcggacgctgccgcggagagcatccgcgc 2856570
>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145539 Score = 111 bits (56), Expect = 3e-21 Identities = 92/104 (88%) Strand = Plus / Plus Query: 477 accttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcgcttg 536 |||||||||||||||||||||| |||||| ||||||||||||| ||||| || ||||| Sbjct: 13718 accttgcggcggaggtgctccttggggatgccggagaccatgcttatctcgcctggcttg 13777 Query: 537 atctccacgagggcatcggaggcctccgcggagagcatccgcgc 580 ||||| |||||||| ||||| || ||||||||||||||||||| Sbjct: 13778 atctcgacgagggcgtcggacgctgccgcggagagcatccgcgc 13821
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Plus Query: 477 accttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcgcttg 536 |||||||||||||||||||||| |||||| |||||||||||| ||||| || ||||| Sbjct: 30157358 accttgcggcggaggtgctccttggggatgtcggagaccatgcttatctcgcctggcttg 30157417 Query: 537 atctccacgagggcatcggaggcctccgcggagagcatccgcgc 580 ||||| |||||||| ||||| || ||| ||||||||||||||| Sbjct: 30157418 atctcaacgagggcgtcggatgctgccgtggagagcatccgcgc 30157461
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 477 accttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcgcttg 536 |||||||||||||||||||||| |||||| |||||||||||| ||||| || ||||| Sbjct: 66537 accttgcggcggaggtgctccttggggatgtcggagaccatgcttatctcgcctggcttg 66478 Query: 537 atctccacgagggcatcggaggcctccgcggagagcatccgcgc 580 ||||| |||||||| ||||| || ||| ||||||||||||||| Sbjct: 66477 atctcaacgagggcgtcggatgctgccgtggagagcatccgcgc 66434
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Plus Query: 477 accttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcgcttg 536 |||||||||||||||||||||| |||||| |||||||||||| ||||| || ||||| Sbjct: 30248780 accttgcggcggaggtgctccttggggatgtcggagaccatgcttatctcgcctggcttg 30248839 Query: 537 atctccacgagggcatcggaggcctccgcggagagcatccgcgc 580 ||||| |||||||| ||||| || ||| ||||||||||||||| Sbjct: 30248840 atctcaacgagggcgtcggatgctgccgtggagagcatccgcgc 30248883
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 480 ttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcgcttgatc 539 ||||||||||||||||||| |||||| ||||||||||||| ||||| || |||||||| Sbjct: 11725590 ttgcggcggaggtgctccttggggatgccggagaccatgcttatctcgcctggcttgatc 11725649 Query: 540 tccacgagggcatcggaggcctccgcggagagcatccgcgc 580 | |||||||| ||||| | ||||||||||||||||||| Sbjct: 11725650 ttgacgagggcgtcggacgttgccgcggagagcatccgcgc 11725690 Score = 40.1 bits (20), Expect = 9.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 630 ggagtggggcggccatcgcgtcggagccgtgcgccg 665 |||| |||||| ||||| |||||||||||| ||||| Sbjct: 11725744 ggagcggggcgtccatctcgtcggagccgtacgccg 11725779
>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0010K08 Length = 184760 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 480 ttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcgcttgatc 539 ||||||||||||||||||| |||||| ||||||||||||| ||||| || |||||||| Sbjct: 171879 ttgcggcggaggtgctccttggggatgccggagaccatgcttatctcgcctggcttgatc 171938 Query: 540 tccacgagggcatcggaggcctccgcggagagcatccgcgc 580 | |||||||| ||||| | ||||||||||||||||||| Sbjct: 171939 ttgacgagggcgtcggacgttgccgcggagagcatccgcgc 171979 Score = 40.1 bits (20), Expect = 9.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 630 ggagtggggcggccatcgcgtcggagccgtgcgccg 665 |||| |||||| ||||| |||||||||||| ||||| Sbjct: 172033 ggagcggggcgtccatctcgtcggagccgtacgccg 172068
>dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0477B05 Length = 142166 Score = 89.7 bits (45), Expect = 1e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 480 ttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcgcttgatc 539 ||||||||||||||||||| |||||| ||||||||||||| ||||| || |||||||| Sbjct: 33480 ttgcggcggaggtgctccttggggatgccggagaccatgcttatctcgcctggcttgatc 33539 Query: 540 tccacgagggcatcggaggcctccgcggagagcatccgcgc 580 | |||||||| ||||| | ||||||||||||||||||| Sbjct: 33540 ttgacgagggcgtcggacgttgccgcggagagcatccgcgc 33580 Score = 40.1 bits (20), Expect = 9.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 630 ggagtggggcggccatcgcgtcggagccgtgcgccg 665 |||| |||||| ||||| |||||||||||| ||||| Sbjct: 33634 ggagcggggcgtccatctcgtcggagccgtacgccg 33669
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 477 accttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcgcttg 536 |||||||||||||||||||||| |||||| ||||||||||||| |||| || ||||| Sbjct: 26569239 accttgcggcggaggtgctccttggggatgccggagaccatgcttatcttgcctggcttg 26569180 Query: 537 atctccacgagggcatcggaggcctccgcggagagcatccgcgc 580 ||||| |||||||| ||||| || || | |||||||||||||| Sbjct: 26569179 atctcgacgagggcgtcggacgctgccacagagagcatccgcgc 26569136
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0460H04 Length = 166490 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 477 accttgcggcggaggtgctcctcggggatcccggagaccatgccgatctccccgcgcttg 536 |||||||||||||||||||||| |||||| ||||||||||||| |||| || ||||| Sbjct: 102892 accttgcggcggaggtgctccttggggatgccggagaccatgcttatcttgcctggcttg 102833 Query: 537 atctccacgagggcatcggaggcctccgcggagagcatccgcgc 580 ||||| |||||||| ||||| || || | |||||||||||||| Sbjct: 102832 atctcgacgagggcgtcggacgctgccacagagagcatccgcgc 102789
>ref|NM_126159.2| Arabidopsis thaliana FRO1 (FROSTBITE1) AT5G67590 (FRO1) mRNA, complete cds Length = 731 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 330 tcaccaacattagcatacggatcaccagtcgatgtccatcccatcaatgggttctcccac 389 ||||||||||||||||| || ||||| || || |||||||||||||| || ||||||||| Sbjct: 375 tcaccaacattagcataggggtcacctgtagaagtccatcccatcaacggattctcccac 316 Query: 390 ttt 392 ||| Sbjct: 315 ttt 313
>emb|BX829644.1|CNS0A05R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB27ZC07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 653 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 330 tcaccaacattagcatacggatcaccagtcgatgtccatcccatcaatgggttctcccac 389 ||||||||||||||||| || ||||| || || |||||||||||||| || ||||||||| Sbjct: 314 tcaccaacattagcataggggtcacctgtagaagtccatcccatcaacggcttctcccac 255 Query: 390 ttt 392 ||| Sbjct: 254 ttt 252
>gb|BT003675.1| Arabidopsis thaliana At5g67590 mRNA, complete cds Length = 465 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 330 tcaccaacattagcatacggatcaccagtcgatgtccatcccatcaatgggttctcccac 389 ||||||||||||||||| || ||||| || || |||||||||||||| || ||||||||| Sbjct: 308 tcaccaacattagcataggggtcacctgtagaagtccatcccatcaacggattctcccac 249 Query: 390 ttt 392 ||| Sbjct: 248 ttt 246
>gb|AY086840.1| Arabidopsis thaliana clone 28455 mRNA, complete sequence Length = 708 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 330 tcaccaacattagcatacggatcaccagtcgatgtccatcccatcaatgggttctcccac 389 ||||||||||||||||| || ||||| || || |||||||||||||| || ||||||||| Sbjct: 375 tcaccaacattagcataggggtcacctgtagaagtccatcccatcaacggattctcccac 316 Query: 390 ttt 392 ||| Sbjct: 315 ttt 313
>dbj|AK118663.1| Arabidopsis thaliana At5g67590 mRNA for unknown protein, complete cds, clone: RAFL19-93-I02 Length = 713 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 330 tcaccaacattagcatacggatcaccagtcgatgtccatcccatcaatgggttctcccac 389 ||||||||||||||||| || ||||| || || |||||||||||||| || ||||||||| Sbjct: 357 tcaccaacattagcataggggtcacctgtagaagtccatcccatcaacggattctcccac 298 Query: 390 ttt 392 ||| Sbjct: 297 ttt 295
>gb|U83836.1|ATU83836 Arabidopsis thaliana telomere repeat binding factor 2 (TRB2) gene, complete cds Length = 6079 Score = 63.9 bits (32), Expect = 7e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 330 tcaccaacattagcatacggatcaccagtcgatgtccatcccatcaatgggttctcccac 389 ||||||||||||||||| || ||||| || || |||||||||||||| || ||||||||| Sbjct: 2803 tcaccaacattagcataggggtcacctgtagaagtccatcccatcaacggattctcccac 2862
>dbj|AB013390.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9I9 Length = 51860 Score = 63.9 bits (32), Expect = 7e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 330 tcaccaacattagcatacggatcaccagtcgatgtccatcccatcaatgggttctcccac 389 ||||||||||||||||| || ||||| || || |||||||||||||| || ||||||||| Sbjct: 37877 tcaccaacattagcataggggtcacctgtagaagtccatcccatcaacggattctcccac 37818
>gb|AC131714.4| Mus musculus BAC clone RP23-179L6 from chromosome 18, complete sequence Length = 193005 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 117 agaaaaagaacatcttttgaaaa 139 ||||||||||||||||||||||| Sbjct: 141816 agaaaaagaacatcttttgaaaa 141838
>gb|AC152454.5| Mus musculus BAC clone RP24-100N16 from 18, complete sequence Length = 224577 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 117 agaaaaagaacatcttttgaaaa 139 ||||||||||||||||||||||| Sbjct: 46092 agaaaaagaacatcttttgaaaa 46114
>emb|CT025607.9| Mouse DNA sequence from clone RP23-451F18 on chromosome 9, complete sequence Length = 187876 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 274 catgtttgtcagcaaatgccttt 296 ||||||||||||||||||||||| Sbjct: 153852 catgtttgtcagcaaatgccttt 153874
>gb|AY439878.1| Armigeres subalbatus ASAP ID: 38931 NADH-ubiquinone oxidoreductase subunit mRNA sequence Length = 775 Score = 44.1 bits (22), Expect = 0.60 Identities = 37/42 (88%) Strand = Plus / Minus Query: 347 cggatcaccagtcgatgtccatcccatcaatgggttctccca 388 ||||||||| | ||||| ||||||||||| |||||| ||||| Sbjct: 489 cggatcaccggacgatgaccatcccatcagtgggttttccca 448
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ggaggtgctcctcggggatccc 508 |||||||||||||||||||||| Sbjct: 1432824 ggaggtgctcctcggggatccc 1432803
>ref|XM_553627.1| Anopheles gambiae str. PEST ENSANGP00000014170 (ENSANGG00000011681), partial mRNA Length = 2922 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 239 aggtgtgtggcgcttcctaaccacat 264 |||||||||| ||||||||||||||| Sbjct: 2581 aggtgtgtggtgcttcctaaccacat 2606
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 ggaggtgctcctcggggatccc 508 |||||||||||||||||||||| Sbjct: 1109912 ggaggtgctcctcggggatccc 1109891
>emb|AL162393.15| Human DNA sequence from clone RP11-534I8 on chromosome 9 Contains a programmed cell death 2 (PDCD2) pseudogene, the 5' end of the gene for a novel C2H2 type zinc finger protein and two CpG islands, complete sequence Length = 184302 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 408 ttgattttccacctcccgactttgc 432 ||||||||||||||||| ||||||| Sbjct: 90516 ttgattttccacctccccactttgc 90540
>ref|XM_310123.2| Anopheles gambiae str. PEST ENSANGP00000022494 (ENSANGG00000021246), partial mRNA Length = 3363 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 239 aggtgtgtggcgcttcctaaccaca 263 |||||||||| |||||||||||||| Sbjct: 2662 aggtgtgtggtgcttcctaaccaca 2686
>ref|XM_308676.2| Anopheles gambiae str. PEST ENSANGP00000021474 (ENSANGG00000018985), partial mRNA Length = 464 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 348 ggatcaccagtcgatgtccatcccatcaatgggttctccca 388 |||||||| || || | ||||||||||| |||||||||||| Sbjct: 185 ggatcaccggttgaggaccatcccatcagtgggttctccca 145
>gb|BC096906.1| Danio rerio zgc:113338, mRNA (cDNA clone MGC:113338 IMAGE:7162661), complete cds Length = 3676 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gagatgcagtcctggctggt 464 |||||||||||||||||||| Sbjct: 2110 gagatgcagtcctggctggt 2129
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 639 cggccatcgcgtcggagccgtgcg 662 ||||||||||||||| |||||||| Sbjct: 2417274 cggccatcgcgtcggtgccgtgcg 2417297
>ref|NM_001033743.1| Danio rerio zgc:113338 (zgc:113338), mRNA Length = 3676 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gagatgcagtcctggctggt 464 |||||||||||||||||||| Sbjct: 2110 gagatgcagtcctggctggt 2129
>ref|XM_751566.1| Ustilago maydis 521 hypothetical protein (UM00512.1) partial mRNA Length = 558 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 365 ccatcccatcaatgggttctccca 388 |||||||||||| ||||||||||| Sbjct: 366 ccatcccatcaaagggttctccca 343
>gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete sequence Length = 127126 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tggaacaaagtaaaatcagc 105 |||||||||||||||||||| Sbjct: 11573 tggaacaaagtaaaatcagc 11554
>gb|AE014830.1| Plasmodium falciparum 3D7 chromosome 10 section 2 of 7 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 aaaagaacatcttttgaaaa 139 |||||||||||||||||||| Sbjct: 210663 aaaagaacatcttttgaaaa 210644
>ref|XM_784283.1| PREDICTED: Strongylocentrotus purpuratus similar to Multidrug resistance-associated protein 5 (LOC584425), mRNA Length = 2283 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 cgatgtccatcccatcaatg 378 |||||||||||||||||||| Sbjct: 1735 cgatgtccatcccatcaatg 1716
>ref|NM_001016994.2| Xenopus tropicalis Nedd4 family interacting protein 2 (ndfip2), mRNA Length = 2429 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 catgtttgtcagcaaatgcc 293 |||||||||||||||||||| Sbjct: 2067 catgtttgtcagcaaatgcc 2048
>emb|AJ505006.1|POL505006 Sorangium cellulosum spiG gene (partial), spiH gene, spiI gene, spiJ gene, spiK gene, spiL gene and spiZ gene Length = 48000 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 gcggcggaggtgctcctcgg 501 |||||||||||||||||||| Sbjct: 26833 gcggcggaggtgctcctcgg 26814
>gb|AC093270.3| Homo sapiens chromosome 5 clone RP11-342F17, complete sequence Length = 184585 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 gtcagcaaatgcctttgctg 300 |||||||||||||||||||| Sbjct: 67905 gtcagcaaatgcctttgctg 67886
>gb|AC010444.5| Homo sapiens chromosome 5 clone CTD-2234B10, complete sequence Length = 91489 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cagagaaaaagaacatcttt 133 |||||||||||||||||||| Sbjct: 90457 cagagaaaaagaacatcttt 90476
>gb|AC159144.4| Medicago truncatula chromosome 7 BAC clone mth2-41a4, complete sequence Length = 55550 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tggaacaaagtaaaatcagc 105 |||||||||||||||||||| Sbjct: 1812 tggaacaaagtaaaatcagc 1831
>gb|AC026405.5| Homo sapiens chromosome 5 clone CTC-347N9, complete sequence Length = 168779 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cagagaaaaagaacatcttt 133 |||||||||||||||||||| Sbjct: 31752 cagagaaaaagaacatcttt 31771
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 637 ggcggccatcgcgtcggagccgtgcgcc 664 ||||||| || ||||||||||||||||| Sbjct: 3957244 ggcggccttctcgtcggagccgtgcgcc 3957271
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 ccggccgagggagggggaag 622 |||||||||||||||||||| Sbjct: 953468 ccggccgagggagggggaag 953449
>gb|AC137484.2| Rattus Norvegicus Strain BN/SsNHsd/MCW BAC, CH230-349A03, complete sequence Length = 164897 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 agagacaaattcagttgcaa 27 |||||||||||||||||||| Sbjct: 83710 agagacaaattcagttgcaa 83691
>emb|CR848172.2| Xenopus tropicalis finished cDNA, clone TGas080d09 Length = 2429 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 catgtttgtcagcaaatgcc 293 |||||||||||||||||||| Sbjct: 2067 catgtttgtcagcaaatgcc 2048
>dbj|AP002360.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-111M22, complete sequences Length = 173379 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 aagtccagcttcaccaacat 339 |||||||||||||||||||| Sbjct: 142590 aagtccagcttcaccaacat 142609
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 cgagggcatcggaggcctcc 563 |||||||||||||||||||| Sbjct: 3223285 cgagggcatcggaggcctcc 3223304
>emb|AL824716.8| Mouse DNA sequence from clone RP23-277F20 on chromosome 4, complete sequence Length = 185441 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cttttgaaaatctccagaca 149 |||||||||||||||||||| Sbjct: 110433 cttttgaaaatctccagaca 110452
>dbj|AP006700.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17H09, TM0550, complete sequence Length = 76403 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 aaaaagaacatcttttgaaa 138 |||||||||||||||||||| Sbjct: 16880 aaaaagaacatcttttgaaa 16861 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,638,281 Number of Sequences: 3902068 Number of extensions: 5638281 Number of successful extensions: 118975 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118330 Number of HSP's gapped (non-prelim): 642 length of query: 690 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 667 effective length of database: 17,143,297,704 effective search space: 11434579568568 effective search space used: 11434579568568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
