Clone Name | rbasdi16 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | KCNQ4_HUMAN (P56696) Potassium voltage-gated channel subfamily K... | 31 | 4.4 | 2 | MYO2_YEAST (P19524) Myosin-2 (Class V unconventional myosin MYO2... | 30 | 7.6 | 3 | ALKJ_PSEPU (Q9WWW2) Alcohol dehydrogenase [acceptor] (EC 1.1.99.-) | 30 | 9.9 | 4 | MYO2_SACBA (Q876G9) Myosin-2 (Class V unconventional myosin MYO2... | 30 | 9.9 |
---|
>KCNQ4_HUMAN (P56696) Potassium voltage-gated channel subfamily KQT member 4| (Voltage-gated potassium channel subunit Kv7.4) (Potassium channel alpha subunit KvLQT4) (KQT-like 4) Length = 695 Score = 30.8 bits (68), Expect = 4.4 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = -2 Query: 452 PGGW*FSPRVLKFIHTMPCCLWSVLTTEQEGQEL 351 P GW F V F+ C + SVL+T QE QEL Sbjct: 94 PRGWAFVYHVFIFLLVFSCLVLSVLSTIQEHQEL 127
>MYO2_YEAST (P19524) Myosin-2 (Class V unconventional myosin MYO2) (Type V| myosin heavy chain MYO2) (Myosin V MYO2) (Cell divison control protein 66) Length = 1574 Score = 30.0 bits (66), Expect = 7.6 Identities = 27/109 (24%), Positives = 50/109 (45%) Frame = -2 Query: 665 KPHGGNSPRSWFIISVTFLEATSVHMPRNLKP*HSTVAFEFPPQKLMSLIM*QQYMPVLS 486 KP G+ + I + + +T+VH R +KP A++F ++S + + VL Sbjct: 640 KPTLGSMFKQSLIELMNTINSTNVHYIRCIKPNADKEAWQFDNLMVLSQL---RACGVLE 696 Query: 485 KIHATKRSAVVPGGW*FSPRVLKFIHTMPCCLWSVLTTEQEGQELILVS 339 I + A P W F VL++ +P W ++ ++E E ++S Sbjct: 697 TIRIS--CAGFPSRWTFEEFVLRYYILIPHEQWDLIFKKKETTEEDIIS 743
>ALKJ_PSEPU (Q9WWW2) Alcohol dehydrogenase [acceptor] (EC 1.1.99.-)| Length = 552 Score = 29.6 bits (65), Expect = 9.9 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Frame = +3 Query: 30 KGLVKYIKTTTNGKVILQVSAVNSNRLDRLNNHG-PRESKSH 152 K + + +KTT +G+VIL + AVN+ +L L+ G E K H Sbjct: 235 KNMHQQVKTTDSGEVILSLGAVNTPQLLMLSGVGAAAELKEH 276
>MYO2_SACBA (Q876G9) Myosin-2 (Class V unconventional myosin MYO2) (Type V| myosin heavy chain MYO2) (Myosin V MYO2) Length = 1568 Score = 29.6 bits (65), Expect = 9.9 Identities = 27/109 (24%), Positives = 51/109 (46%) Frame = -2 Query: 665 KPHGGNSPRSWFIISVTFLEATSVHMPRNLKP*HSTVAFEFPPQKLMSLIM*QQYMPVLS 486 KP G+ + I ++ + +T+VH R +KP A++F ++S + + VL Sbjct: 642 KPTLGSMFKQSLIELMSTINSTNVHYIRCIKPNADKEAWQFDNLMVLSQL---RACGVLE 698 Query: 485 KIHATKRSAVVPGGW*FSPRVLKFIHTMPCCLWSVLTTEQEGQELILVS 339 I + A P W F VL++ +P W ++ ++E E ++S Sbjct: 699 TIRIS--CAGFPSRWTFEEFVLRYYILIPHEEWDLIFQKKETTEDDIIS 745 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,174,161 Number of Sequences: 219361 Number of extensions: 2080328 Number of successful extensions: 4600 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4474 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4596 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7479594804 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)