Clone Name	rbasdh24
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK099501.1| Oryza sativa (japonica cultivar-group) cDNA clon...	222	1e-54
2	ref|NM_190082.1| Oryza sativa (japonica cultivar-group), predic...	210	4e-51
3	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	159	1e-35
4	dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic D...	159	1e-35
5	dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D...	159	1e-35
6	dbj|AK073796.1| Oryza sativa (japonica cultivar-group) cDNA clon...	159	1e-35
7	dbj|AK073553.1| Oryza sativa (japonica cultivar-group) cDNA clon...	159	1e-35
8	gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome...	111	3e-21
9	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	111	3e-21
10	gb|AY021985.1| Oryza sativa microsatellite MRG4310 containing (T...	103	7e-19
11	gb|AY107712.1| Zea mays PCO079656 mRNA sequence	82	3e-12
12	ref|XM_475151.1| Oryza sativa (japonica cultivar-group), predic...	76	2e-10
13	ref|NM_116545.2| Arabidopsis thaliana RNA binding / nucleic acid...	68	4e-08
14	gb|AY084669.1| Arabidopsis thaliana clone 114653 mRNA, complete ...	68	4e-08
15	gb|AC122543.1| Genomic sequence for Brassica oleracea, clone B21...	66	2e-07
16	gb|AY104506.1| Zea mays PCO080326 mRNA sequence	58	4e-05
17	gb|BC045035.1| Xenopus laevis CUG triplet repeat, RNA binding pr...	54	6e-04
18	gb|U69547.1|XLU69547 Xenopus laevis RNA binding protein Etr-3 (e...	54	6e-04
19	emb|AJ851563.1| Gallus gallus mRNA for hypothetical protein, clo...	48	0.037
20	ref|NM_001012521.1| Gallus gallus CUG triplet repeat, RNA bindin...	48	0.037
21	ref|NM_178963.1| Arabidopsis thaliana RNA binding / nucleic acid...	46	0.15
22	gb|AF069442.1| Arabidopsis thaliana BAC T4I9, chromosome IV, nea...	46	0.15
23	gb|AC005275.1| Arabidopsis thaliana BAC F4C21 from chromosome IV...	46	0.15
24	gb|AY288986.1| Gallus gallus ELAV-type RNA-binding protein 3 var...	46	0.15
25	gb|AY288985.1| Gallus gallus ELAV-type RNA-binding protein 3 var...	46	0.15
26	emb|Y18298.1|MMU18298 Mus musculus mRNA for elav-type RNA-bindin...	46	0.15
27	ref|XM_775954.1| PREDICTED: Strongylocentrotus purpuratus simila...	46	0.15
28	emb|AL161496.2|ATCHRIV8 Arabidopsis thaliana DNA chromosome 4, c...	46	0.15
29	gb|AY065261.1| Arabidopsis thaliana putative ribonucleoprotein (...	46	0.15
30	emb|AJ010386.1|RNO010386 Rattus norvegicus mRNA for ETR-R3b prot...	46	0.15
31	emb|AJ010351.1|RNO010351 Rattus norvegicus mRNA for ETR-R3a prot...	46	0.15
32	ref|NM_010160.1| Mus musculus CUG triplet repeat, RNA binding pr...	46	0.15
33	dbj|AK137292.1| Mus musculus adult male urinary bladder cDNA, RI...	46	0.15
34	dbj|AK151818.1| Mus musculus bone marrow macrophage cDNA, RIKEN ...	46	0.15
35	dbj|AK161349.1| Mus musculus adult male testis cDNA, RIKEN full-...	46	0.15
36	ref|XM_696884.1| PREDICTED: Danio rerio hypothetical protein LOC...	46	0.15
37	dbj|AK153267.1| Mus musculus bone marrow macrophage cDNA, RIKEN ...	46	0.15
38	dbj|AK160861.1| Mus musculus adult male brain cDNA, RIKEN full-l...	46	0.15
39	dbj|AK164914.1| Mus musculus 0 day neonate lung cDNA, RIKEN full...	46	0.15
40	gb|AY052559.1| Xenopus laevis bruno-like protein 3 (brunol-3) mR...	46	0.15
41	gb|BC026856.1| Mus musculus CUG triplet repeat, RNA binding prot...	46	0.15
42	ref|NM_204260.1| Gallus gallus CUG triplet repeat, RNA binding p...	46	0.15
43	gb|AF169013.1|AF169013 Rattus norvegicus RNA binding protein NAP...	46	0.15
44	dbj|AK208664.1| Mus musculus cDNA, clone:Y2G0112F20, strand:minu...	46	0.15
45	gb|AF090697.1|AF090697 Mus musculus apoptosis-related RNA bindin...	46	0.15
46	gb|AF090696.1|AF090696 Mus musculus apoptosis-related RNA bindin...	46	0.15
47	gb|AF090695.1|AF090695 Rattus norvegicus apoptosis-related RNA b...	46	0.15
48	ref|NM_017197.1| Rattus norvegicus CUG triplet repeat, RNA bindi...	46	0.15
49	ref|XM_879783.1| PREDICTED: Bos taurus similar to CUG triplet re...	44	0.58
50	ref|XM_867177.1| PREDICTED: Bos taurus similar to CUG triplet re...	44	0.58
51	ref|XM_879735.1| PREDICTED: Bos taurus similar to CUG triplet re...	44	0.58
52	ref|XM_879705.1| PREDICTED: Bos taurus similar to CUG triplet re...	44	0.58
53	ref|XM_879679.1| PREDICTED: Bos taurus similar to CUG triplet re...	44	0.58
54	ref|XM_611631.2| PREDICTED: Bos taurus similar to CUG triplet re...	44	0.58
55	ref|XM_879614.1| PREDICTED: Bos taurus similar to CUG triplet re...	44	0.58
56	ref|XM_879584.1| PREDICTED: Bos taurus similar to CUG triplet re...	44	0.58
57	ref|NM_198683.1| Mus musculus CUG triplet repeat, RNA binding pr...	44	0.58
58	ref|NM_017368.2| Mus musculus CUG triplet repeat, RNA binding pr...	44	0.58
59	gb|BC021393.1| Mus musculus CUG triplet repeat, RNA binding prot...	44	0.58
60	emb|AJ007987.1|MMU7987 Mus musculus mRNA for deadenylation facto...	44	0.58
61	emb|BX537117.6| Zebrafish DNA sequence from clone CH211-281N15 i...	44	0.58
62	dbj|AK135030.1| Mus musculus adult male olfactory brain cDNA, RI...	44	0.58
63	dbj|AK143698.1| Mus musculus 6 days neonate spleen cDNA, RIKEN f...	44	0.58
64	dbj|AK156725.1| Mus musculus activated spleen cDNA, RIKEN full-l...	44	0.58
65	dbj|AK014492.1| Mus musculus 14 days embryo liver cDNA, RIKEN fu...	44	0.58
66	gb|AF314172.1|AF314172 Mus musculus BRUNOL2 (Brunol2) mRNA, part...	44	0.58
67	gb|AF267535.1|AF267535 Mus musculus CUG-binding protein LYLQ iso...	44	0.58
68	dbj|AK196827.1| Mus musculus cDNA, clone:Y1G0123C05, strand:minu...	44	0.58
69	dbj|AK183548.1| Mus musculus cDNA, clone:Y0G0126F10, strand:plus...	44	0.58
70	gb|AC018631.3| Drosophila melanogaster clone BACR03I06, complete...	42	2.3
71	ref|XM_817392.1| Trypanosoma brucei TREU927 hypothetical protein...	42	2.3
72	ref|NM_001017152.2| Xenopus tropicalis CUG triplet repeat, RNA b...	42	2.3
73	emb|AL645691.20| Zebrafish DNA sequence from clone RP71-1L17 in ...	42	2.3
74	gb|AC154879.10| Mus musculus chromosome 1, clone RP24-276N20, co...	42	2.3
75	gb|AC008989.6| Homo sapiens chromosome 19 clone LLNL-F_219B11, c...	42	2.3
76	gb|AC163694.2| Mus musculus BAC clone RP24-80O2 from chromosome ...	42	2.3
77	gb|AC002560.2|AC002560 Genomic sequence for Arabidopsis thaliana...	42	2.3
78	emb|BX936416.11| Zebrafish DNA sequence from clone CH211-194I16 ...	42	2.3
79	emb|CR760913.2| Xenopus tropicalis finished cDNA, clone TEgg064f02	42	2.3
80	gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 ...	42	2.3
81	emb|CT030641.11| Mouse DNA sequence from clone RP23-32M15 on chr...	42	2.3
82	ref|NM_202023.1| Arabidopsis thaliana RNA binding / nucleic acid...	40	9.0
83	ref|NM_100228.3| Arabidopsis thaliana RNA binding / nucleic acid...	40	9.0
84	ref|NM_124994.3| Arabidopsis thaliana unknown protein AT5G56120 ...	40	9.0
85	ref|NM_119810.1| Arabidopsis thaliana S-adenosylmethionine-depen...	40	9.0
86	ref|XM_639566.1| Dictyostelium discoideum hypothetical protein (...	40	9.0
87	ref|XM_639501.1| Dictyostelium discoideum hypothetical protein (...	40	9.0
88	gb|BC072134.1| Xenopus laevis ribonucleoprotein, mRNA (cDNA clon...	40	9.0
89	gb|BC073316.1| Xenopus laevis cDNA clone MGC:80719 IMAGE:5511863...	40	9.0
90	gb|BT014888.1| Arabidopsis thaliana unknown protein (At4g36470) ...	40	9.0
91	gb|AC101559.20| Mus musculus chromosome 5, clone RP23-194K16, co...	40	9.0
92	gb|BT011992.1| Arabidopsis thaliana At4g36470 mRNA sequence	40	9.0
93	gb|BC057704.1| Xenopus laevis ribonucleoprotein, mRNA (cDNA clon...	40	9.0
94	gb|AC102449.7| Mus musculus chromosome 5, clone RP24-216G12, com...	40	9.0
95	gb|BT010876.1| Arabidopsis thaliana At5g56120 gene, complete cds	40	9.0
96	gb|AC139183.4| Mus musculus BAC clone RP24-114C21 from chromosom...	40	9.0
97	gb|AC006979.2| Homo sapiens BAC clone GS1-85B12 from 7, complete...	40	9.0
98	gb|AC159889.2| Mus musculus BAC clone RP24-81G6 from chromosome ...	40	9.0
99	emb|AL591214.8| Human DNA sequence from clone RP11-18I23 on chro...	40	9.0
100	emb|AL512632.8| Human DNA sequence from clone RP11-538O14 on chr...	40	9.0
101	emb|AL356111.13| Human DNA sequence from clone RP11-501G6 on chr...	40	9.0
102	gb|AC078794.13| Homo sapiens 3 BAC RP11-67L2 (Roswell Park Cance...	40	9.0
103	emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA ...	40	9.0
104	emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp...	40	9.0
105	emb|AL772136.5| Zebrafish DNA sequence from clone CH211-188C22 i...	40	9.0
106	emb|AL161589.2|ATCHRIV85 Arabidopsis thaliana DNA chromosome 4, ...	40	9.0
107	emb|AJ238410.1|HSA238410 Homo sapiens partial HLA-DRB1 gene for ...	40	9.0
108	emb|BX005003.10| Zebrafish DNA sequence from clone DKEY-241F8 in...	40	9.0
109	gb|AC104165.2| Homo sapiens chromosome 3 clone RP11-681O4, compl...	40	9.0
110	gb|AC135795.21| Medicago truncatula clone mth2-28g10, complete s...	40	9.0
111	gb|AY191018.1| Dictyostelium discoideum autophagy protein 4 (apg...	40	9.0
112	ref|NM_137273.2| Drosophila melanogaster CG8060-RA (CG8060), mRNA	40	9.0
113	gb|AY061600.1| Drosophila melanogaster SD05384 full length cDNA	40	9.0
114	emb|AL844143.17| Mouse DNA sequence from clone RP23-370D19 on ch...	40	9.0
115	gb|AC151523.4| Medicago truncatula chromosome 7 BAC clone mth2-1...	40	9.0
116	gb|AC158774.6| Mus musculus chromosome 18, clone RP23-427N16, co...	40	9.0
117	gb|AC157935.3| Mus musculus chromosome 5, clone RP24-228K8, comp...	40	9.0
118	gb|AC009356.3|AC009356 Drosophila melanogaster, chromosome 2R, r...	40	9.0
119	emb|BX814329.1|CNS0ADRA Arabidopsis thaliana Full-length cDNA Co...	40	9.0
120	emb|BX814331.1|CNS0ADSC Arabidopsis thaliana Full-length cDNA Co...	40	9.0
121	emb|BX817177.1|CNS0ADAA Arabidopsis thaliana Full-length cDNA Co...	40	9.0
122	gb|AC157502.2| Medicago truncatula chromosome 7 BAC clone mte1-5...	40	9.0
123	gb|AC008230.4|AC008230 Drosophila melanogaster, chromosome 2R, r...	40	9.0
124	gb|AC124787.6| Mus musculus chromosome 18, clone RP24-395J18, co...	40	9.0
125	gb|BT005358.1| Arabidopsis thaliana At1g03457 mRNA, complete cds	40	9.0
126	gb|AC116330.2| Dictyostelium discoideum chromosome 2 map 3191214...	40	9.0
127	dbj|AK200025.1| Mus musculus cDNA, clone:Y1G0133C06, strand:minu...	40	9.0
128	dbj|AK176891.1| Arabidopsis thaliana mRNA for putative protein, ...	40	9.0
129	dbj|AK117246.1| Arabidopsis thaliana At1g03460 mRNA for putative...	40	9.0
130	dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	40	9.0
131	gb|AE003807.3| Drosophila melanogaster chromosome 2R, section 43...	40	9.0
132	dbj|AP001889.5| Homo sapiens genomic DNA, chromosome 11 clone:RP...	40	9.0
133	gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge...	40	9.0
134	gb|AC004318.1|AC004318 Drosophila melanogaster DNA sequence (P1 ...	40	9.0
135	gb|U16800.1|XLU16800 Xenopus laevis elav-type ribonucleoprotein ...	40	9.0

---

>dbj|AK099501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028I07, full
            insert sequence
          Length = 1837

 Score =  222 bits (112), Expect = 1e-54
 Identities = 291/350 (83%), Gaps = 8/350 (2%)
 Strand = Plus / Minus

                                                                        
Query: 201  tcaactatctgacaaatatgtaccgggaacaagaccgcattgtcatcacagatgattttt 260
            |||| ||||||||||||||||||| |||||  || ||| | ||||||| ||     ||||
Sbjct: 1616 tcaattatctgacaaatatgtaccaggaacctgatcgcgtggtcatcatag-----tttt 1562

                                                                        
Query: 261  tgtcaaaaaggtttactgtgcttgttgttgttgtctctcttgagttgtactttgagtttc 320
             ||||||| |||||||||||||||  |||||   ||||||||||||||||||||||||| 
Sbjct: 1561 cgtcaaaagggtttactgtgcttggagttgt---ctctcttgagttgtactttgagtttt 1505

                                                                        
Query: 321  ttgccacctagctggaaaccgttcatcatggcgattgccgactgtgcagacacagggttg 380
            || |  ||||  ||||||||||||||||   | || || | |||||| ||  ||||    
Sbjct: 1504 ttactgcctaattggaaaccgttcatcacaccaatggctgcctgtgcggaagcaggagaa 1445

                                                                        
Query: 381  tcatagcttacaaaaccgaagcatttgctggaaccagttgctttgtcaacaaacaccttg 440
            || |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||| 
Sbjct: 1444 tcgtagcttacaaaaccaaagcatttgctggaacccgttgctttgtctacaaaaacctta 1385

                                                                        
Query: 441  gcacttattactctaccaaacctctggaaggcatcggagagttcttggtcaccaaattct 500
            ||||||| ||||||||| ||||||||||| |||| ||| || |||||||| ||| | |||
Sbjct: 1384 gcacttagtactctaccgaacctctggaatgcattggaaaggtcttggtccccataatct 1325

                                                              
Query: 501  tgtgggatatgatagataaatagattggctccaggaggtccttctgtttg 550
            |||||||||||||||||||||||||| ||||| ||||| |||||| ||||
Sbjct: 1324 tgtgggatatgatagataaatagattagctcctggaggaccttctatttg 1275



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 4    aattgaatgaatctgacttctggtgta 30
            |||||||||||||||||||||| ||||
Sbjct: 1777 aattgaatgaatctgacttctgatgta 1751

---

>ref|NM_190082.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1383

 Score =  210 bits (106), Expect = 4e-51
 Identities = 243/288 (84%), Gaps = 3/288 (1%)
 Strand = Plus / Minus

                                                                        
Query: 263  tcaaaaaggtttactgtgcttgttgttgttgtctctcttgagttgtactttgagtttctt 322
            |||||| |||||||||||||||  |||||   ||||||||||||||||||||||||| ||
Sbjct: 1383 tcaaaagggtttactgtgcttggagttgt---ctctcttgagttgtactttgagtttttt 1327

                                                                        
Query: 323  gccacctagctggaaaccgttcatcatggcgattgccgactgtgcagacacagggttgtc 382
             |  ||||  ||||||||||||||||   | || || | |||||| ||  ||||    ||
Sbjct: 1326 actgcctaattggaaaccgttcatcacaccaatggctgcctgtgcggaagcaggagaatc 1267

                                                                        
Query: 383  atagcttacaaaaccgaagcatttgctggaaccagttgctttgtcaacaaacaccttggc 442
             |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||
Sbjct: 1266 gtagcttacaaaaccaaagcatttgctggaacccgttgctttgtctacaaaaaccttagc 1207

                                                                        
Query: 443  acttattactctaccaaacctctggaaggcatcggagagttcttggtcaccaaattcttg 502
            ||||| ||||||||| ||||||||||| |||| ||| || |||||||| ||| | |||||
Sbjct: 1206 acttagtactctaccgaacctctggaatgcattggaaaggtcttggtccccataatcttg 1147

                                                            
Query: 503  tgggatatgatagataaatagattggctccaggaggtccttctgtttg 550
            |||||||||||||||||||||||| ||||| ||||| |||||| ||||
Sbjct: 1146 tgggatatgatagataaatagattagctcctggaggaccttctatttg 1099

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  159 bits (80), Expect = 1e-35
 Identities = 125/140 (89%)
 Strand = Plus / Minus

                                                                            
Query: 399      aagcatttgctggaaccagttgctttgtcaacaaacaccttggcacttattactctacca 458
                ||||||||||||||||| ||||||||||| ||||| ||||| ||||||| ||||||||| 
Sbjct: 41190748 aagcatttgctggaacccgttgctttgtctacaaaaaccttagcacttagtactctaccg 41190689

                                                                            
Query: 459      aacctctggaaggcatcggagagttcttggtcaccaaattcttgtgggatatgatagata 518
                ||||||||||| |||| ||| || |||||||| ||| | |||||||||||||||||||||
Sbjct: 41190688 aacctctggaatgcattggaaaggtcttggtccccataatcttgtgggatatgatagata 41190629

                                    
Query: 519      aatagattggctccaggagg 538
                |||||||| ||||| |||||
Sbjct: 41190628 aatagattagctcctggagg 41190609



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 122/148 (82%), Gaps = 8/148 (5%)
 Strand = Plus / Minus

                                                                            
Query: 201      tcaactatctgacaaatatgtaccgggaacaagaccgcattgtcatcacagatgattttt 260
                |||| ||||||||||||||||||| |||||  || ||| | ||||||| ||     ||||
Sbjct: 41191041 tcaattatctgacaaatatgtaccaggaacctgatcgcgtggtcatcatag-----tttt 41190987

                                                                            
Query: 261      tgtcaaaaaggtttactgtgcttgttgttgttgtctctcttgagttgtactttgagtttc 320
                 ||||||| |||||||||||||||  |||||   ||||||||||||||||||||||||| 
Sbjct: 41190986 cgtcaaaagggtttactgtgcttggagttgt---ctctcttgagttgtactttgagtttt 41190930

                                            
Query: 321      ttgccacctagctggaaaccgttcatca 348
                || |  ||||  ||||||||||||||||
Sbjct: 41190929 ttactgcctaattggaaaccgttcatca 41190902



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 4        aattgaatgaatctgacttctggtgta 30
                |||||||||||||||||||||| ||||
Sbjct: 41191202 aattgaatgaatctgacttctgatgta 41191176

---

>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1150F11
          Length = 130355

 Score =  159 bits (80), Expect = 1e-35
 Identities = 125/140 (89%)
 Strand = Plus / Minus

                                                                        
Query: 399  aagcatttgctggaaccagttgctttgtcaacaaacaccttggcacttattactctacca 458
            ||||||||||||||||| ||||||||||| ||||| ||||| ||||||| ||||||||| 
Sbjct: 7663 aagcatttgctggaacccgttgctttgtctacaaaaaccttagcacttagtactctaccg 7604

                                                                        
Query: 459  aacctctggaaggcatcggagagttcttggtcaccaaattcttgtgggatatgatagata 518
            ||||||||||| |||| ||| || |||||||| ||| | |||||||||||||||||||||
Sbjct: 7603 aacctctggaatgcattggaaaggtcttggtccccataatcttgtgggatatgatagata 7544

                                
Query: 519  aatagattggctccaggagg 538
            |||||||| ||||| |||||
Sbjct: 7543 aatagattagctcctggagg 7524



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 122/148 (82%), Gaps = 8/148 (5%)
 Strand = Plus / Minus

                                                                        
Query: 201  tcaactatctgacaaatatgtaccgggaacaagaccgcattgtcatcacagatgattttt 260
            |||| ||||||||||||||||||| |||||  || ||| | ||||||| ||     ||||
Sbjct: 7956 tcaattatctgacaaatatgtaccaggaacctgatcgcgtggtcatcatag-----tttt 7902

                                                                        
Query: 261  tgtcaaaaaggtttactgtgcttgttgttgttgtctctcttgagttgtactttgagtttc 320
             ||||||| |||||||||||||||  |||||   ||||||||||||||||||||||||| 
Sbjct: 7901 cgtcaaaagggtttactgtgcttggagttgt---ctctcttgagttgtactttgagtttt 7845

                                        
Query: 321  ttgccacctagctggaaaccgttcatca 348
            || |  ||||  ||||||||||||||||
Sbjct: 7844 ttactgcctaattggaaaccgttcatca 7817



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 4    aattgaatgaatctgacttctggtgta 30
            |||||||||||||||||||||| ||||
Sbjct: 8117 aattgaatgaatctgacttctgatgta 8091

---

>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504E02
          Length = 137468

 Score =  159 bits (80), Expect = 1e-35
 Identities = 125/140 (89%)
 Strand = Plus / Minus

                                                                         
Query: 399   aagcatttgctggaaccagttgctttgtcaacaaacaccttggcacttattactctacca 458
             ||||||||||||||||| ||||||||||| ||||| ||||| ||||||| ||||||||| 
Sbjct: 87803 aagcatttgctggaacccgttgctttgtctacaaaaaccttagcacttagtactctaccg 87744

                                                                         
Query: 459   aacctctggaaggcatcggagagttcttggtcaccaaattcttgtgggatatgatagata 518
             ||||||||||| |||| ||| || |||||||| ||| | |||||||||||||||||||||
Sbjct: 87743 aacctctggaatgcattggaaaggtcttggtccccataatcttgtgggatatgatagata 87684

                                 
Query: 519   aatagattggctccaggagg 538
             |||||||| ||||| |||||
Sbjct: 87683 aatagattagctcctggagg 87664



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 122/148 (82%), Gaps = 8/148 (5%)
 Strand = Plus / Minus

                                                                         
Query: 201   tcaactatctgacaaatatgtaccgggaacaagaccgcattgtcatcacagatgattttt 260
             |||| ||||||||||||||||||| |||||  || ||| | ||||||| ||     ||||
Sbjct: 88096 tcaattatctgacaaatatgtaccaggaacctgatcgcgtggtcatcatag-----tttt 88042

                                                                         
Query: 261   tgtcaaaaaggtttactgtgcttgttgttgttgtctctcttgagttgtactttgagtttc 320
              ||||||| |||||||||||||||  |||||   ||||||||||||||||||||||||| 
Sbjct: 88041 cgtcaaaagggtttactgtgcttggagttgt---ctctcttgagttgtactttgagtttt 87985

                                         
Query: 321   ttgccacctagctggaaaccgttcatca 348
             || |  ||||  ||||||||||||||||
Sbjct: 87984 ttactgcctaattggaaaccgttcatca 87957



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 4     aattgaatgaatctgacttctggtgta 30
             |||||||||||||||||||||| ||||
Sbjct: 88257 aattgaatgaatctgacttctgatgta 88231

---

>dbj|AK073796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067B10, full
            insert sequence
          Length = 1739

 Score =  159 bits (80), Expect = 1e-35
 Identities = 229/278 (82%), Gaps = 3/278 (1%)
 Strand = Plus / Minus

                                                                        
Query: 261  tgtcaaaaaggtttactgtgcttgttgttgttgtctctcttgagttgtactttgagtttc 320
            |||||| ||| ||||||||||||| ||||||   ||||||||||||||||||| ||||| 
Sbjct: 1495 tgtcaataagttttactgtgcttgctgttgt---ctctcttgagttgtactttcagtttt 1439

                                                                        
Query: 321  ttgccacctagctggaaaccgttcatcatggcgattgccgactgtgcagacacagggttg 380
            || |||||||  ||| | |||||||||||    || || | |||||||||  ||||    
Sbjct: 1438 ttaccacctaattggtatccgttcatcatactaatggctgtctgtgcagaagcaggagaa 1379

                                                                        
Query: 381  tcatagcttacaaaaccgaagcatttgctggaaccagttgctttgtcaacaaacaccttg 440
            |||||||||| ||||||||||||||| ||   ||||||||||||||| ||||| || || 
Sbjct: 1378 tcatagcttataaaaccgaagcatttactaagaccagttgctttgtctacaaaaacttta 1319

                                                                        
Query: 441  gcacttattactctaccaaacctctggaaggcatcggagagttcttggtcaccaaattct 500
            ||||| | |||||||||||| | ||| |||||| |||  || |||||||| |||||||||
Sbjct: 1318 gcactcagtactctaccaaaaccctgaaaggcaccggcaagatcttggtcgccaaattct 1259

                                                  
Query: 501  tgtgggatatgatagataaatagattggctccaggagg 538
            || ||||| || |||||||||| |||||||||||||||
Sbjct: 1258 tgagggatgtggtagataaataaattggctccaggagg 1221



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 623  attgtgaggattcccaaaaggacgactatt 652
            |||||||| |||| ||||||||||||||||
Sbjct: 1139 attgtgagaattcacaaaaggacgactatt 1110

---

>dbj|AK073553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045O20, full
            insert sequence
          Length = 2722

 Score =  159 bits (80), Expect = 1e-35
 Identities = 229/278 (82%), Gaps = 3/278 (1%)
 Strand = Plus / Minus

                                                                        
Query: 261  tgtcaaaaaggtttactgtgcttgttgttgttgtctctcttgagttgtactttgagtttc 320
            |||||| ||| ||||||||||||| ||||||   ||||||||||||||||||| ||||| 
Sbjct: 2516 tgtcaataagttttactgtgcttgctgttgt---ctctcttgagttgtactttcagtttt 2460

                                                                        
Query: 321  ttgccacctagctggaaaccgttcatcatggcgattgccgactgtgcagacacagggttg 380
            || |||||||  ||| | |||||||||||    || || | |||||||||  ||||    
Sbjct: 2459 ttaccacctaattggtatccgttcatcatactaatggctgtctgtgcagaagcaggagaa 2400

                                                                        
Query: 381  tcatagcttacaaaaccgaagcatttgctggaaccagttgctttgtcaacaaacaccttg 440
            |||||||||| ||||||||||||||| ||   ||||||||||||||| ||||| || || 
Sbjct: 2399 tcatagcttataaaaccgaagcatttactaagaccagttgctttgtctacaaaaacttta 2340

                                                                        
Query: 441  gcacttattactctaccaaacctctggaaggcatcggagagttcttggtcaccaaattct 500
            ||||| | |||||||||||| | ||| |||||| |||  || |||||||| |||||||||
Sbjct: 2339 gcactcagtactctaccaaaaccctgaaaggcaccggcaagatcttggtcgccaaattct 2280

                                                  
Query: 501  tgtgggatatgatagataaatagattggctccaggagg 538
            || ||||| || |||||||||| |||||||||||||||
Sbjct: 2279 tgagggatgtggtagataaataaattggctccaggagg 2242



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 623  attgtgaggattcccaaaaggacgactatt 652
            |||||||| |||| ||||||||||||||||
Sbjct: 2159 attgtgagaattcacaaaaggacgactatt 2130

---

>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09,
              complete sequence
          Length = 167318

 Score =  111 bits (56), Expect = 3e-21
 Identities = 122/144 (84%)
 Strand = Plus / Minus

                                                                          
Query: 395    accgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcacttattactct 454
              |||||||||||| ||   ||||||||||||||| ||||| || || ||||| | ||||||
Sbjct: 116255 accgaagcatttactaagaccagttgctttgtctacaaaaactttagcactcagtactct 116196

                                                                          
Query: 455    accaaacctctggaaggcatcggagagttcttggtcaccaaattcttgtgggatatgata 514
              |||||| | ||| |||||| |||  || |||||||| ||||||||||| ||||| || ||
Sbjct: 116195 accaaaaccctgaaaggcaccggcaagatcttggtcgccaaattcttgagggatgtggta 116136

                                      
Query: 515    gataaatagattggctccaggagg 538
              |||||||| |||||||||||||||
Sbjct: 116135 gataaataaattggctccaggagg 116112



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 76/89 (85%), Gaps = 3/89 (3%)
 Strand = Plus / Minus

                                                                          
Query: 261    tgtcaaaaaggtttactgtgcttgttgttgttgtctctcttgagttgtactttgagtttc 320
              |||||| ||| ||||||||||||| ||||||   ||||||||||||||||||| ||||| 
Sbjct: 116461 tgtcaataagttttactgtgcttgctgttgt---ctctcttgagttgtactttcagtttt 116405

                                           
Query: 321    ttgccacctagctggaaaccgttcatcat 349
              || |||||||  ||| | |||||||||||
Sbjct: 116404 ttaccacctaattggtatccgttcatcat 116376



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 623    attgtgaggattcccaaaaggacgactatt 652
              |||||||| |||| ||||||||||||||||
Sbjct: 115942 attgtgagaattcacaaaaggacgactatt 115913

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  111 bits (56), Expect = 3e-21
 Identities = 122/144 (84%)
 Strand = Plus / Minus

                                                                            
Query: 395      accgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcacttattactct 454
                |||||||||||| ||   ||||||||||||||| ||||| || || ||||| | ||||||
Sbjct: 17856301 accgaagcatttactaagaccagttgctttgtctacaaaaactttagcactcagtactct 17856242

                                                                            
Query: 455      accaaacctctggaaggcatcggagagttcttggtcaccaaattcttgtgggatatgata 514
                |||||| | ||| |||||| |||  || |||||||| ||||||||||| ||||| || ||
Sbjct: 17856241 accaaaaccctgaaaggcaccggcaagatcttggtcgccaaattcttgagggatgtggta 17856182

                                        
Query: 515      gataaatagattggctccaggagg 538
                |||||||| |||||||||||||||
Sbjct: 17856181 gataaataaattggctccaggagg 17856158



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 76/89 (85%), Gaps = 3/89 (3%)
 Strand = Plus / Minus

                                                                            
Query: 261      tgtcaaaaaggtttactgtgcttgttgttgttgtctctcttgagttgtactttgagtttc 320
                |||||| ||| ||||||||||||| ||||||   ||||||||||||||||||| ||||| 
Sbjct: 17856507 tgtcaataagttttactgtgcttgctgttgt---ctctcttgagttgtactttcagtttt 17856451

                                             
Query: 321      ttgccacctagctggaaaccgttcatcat 349
                || |||||||  ||| | |||||||||||
Sbjct: 17856450 ttaccacctaattggtatccgttcatcat 17856422



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 623      attgtgaggattcccaaaaggacgactatt 652
                |||||||| |||| ||||||||||||||||
Sbjct: 17855988 attgtgagaattcacaaaaggacgactatt 17855959

---

>gb|AY021985.1| Oryza sativa microsatellite MRG4310 containing (TC)X12, closest to
           marker R1014A, genomic sequence
          Length = 224

 Score =  103 bits (52), Expect = 7e-19
 Identities = 82/92 (89%)
 Strand = Plus / Minus

                                                                       
Query: 399 aagcatttgctggaaccagttgctttgtcaacaaacaccttggcacttattactctacca 458
           ||||||||||||||||| ||||||||||| ||||| ||||| ||||||| ||||||||| 
Sbjct: 94  aagcatttgctggaacccgttgctttgtctacaaaaaccttagcacttagtactctaccg 35

                                           
Query: 459 aacctctggaaggcatcggagagttcttggtc 490
           ||||||||||| |||| ||| || ||||||||
Sbjct: 34  aacctctggaatgcattggaaaggtcttggtc 3

---

>gb|AY107712.1| Zea mays PCO079656 mRNA sequence
          Length = 471

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 146/181 (80%)
 Strand = Plus / Minus

                                                                       
Query: 274 tactgtgcttgttgttgttgtctctcttgagttgtactttgagtttcttgccacctagct 333
           ||||||||||| ||||||| |||||||| |||||||| |||||||| || || |||| ||
Sbjct: 191 tactgtgcttggtgttgttttctctcttcagttgtaccttgagttttttaccgcctaact 132

                                                                       
Query: 334 ggaaaccgttcatcatggcgattgccgactgtgcagacacagggttgtcatagcttacaa 393
           || | ||||||||| ||  ||| || | ||| || ||  ||||   ||| ||||| ||||
Sbjct: 131 ggtagccgttcatcctgttgatggctgcctgcgcggaggcaggagagtcgtagctcacaa 72

                                                                       
Query: 394 aaccgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcacttattactc 453
           ||||||||||||||||    || ||||||||||| || |||||||| || |||| |||||
Sbjct: 71  aaccgaagcatttgctcacgcccgttgctttgtccacgaacaccttagcgcttactactc 12

            
Query: 454 t 454
           |
Sbjct: 11  t 11

---

>ref|XM_475151.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1146

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                        
Query: 453  ctaccaaacctctggaaggcatcggagagttcttggtcaccaaattcttgtgggatatga 512
            |||||||| | ||| |||||| |||  || |||||||| ||||||||||| ||||| || 
Sbjct: 1146 ctaccaaaaccctgaaaggcaccggcaagatcttggtcgccaaattcttgagggatgtgg 1087

                                      
Query: 513  tagataaatagattggctccaggagg 538
            |||||||||| |||||||||||||||
Sbjct: 1086 tagataaataaattggctccaggagg 1061



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 623 attgtgaggattcccaaaaggacgactatt 652
           |||||||| |||| ||||||||||||||||
Sbjct: 975 attgtgagaattcacaaaaggacgactatt 946

---

>ref|NM_116545.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT4G03110
            transcript variant AT4G03110.1 mRNA, complete cds
          Length = 1759

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                        
Query: 380  gtcatagcttacaaaaccgaagcatttgctggaaccagttgctttgtcaacaaacacctt 439
            ||||||||| ||||||||||| ||||||||   |||||| |||||||| ||||| |||||
Sbjct: 1321 gtcatagctaacaaaaccgaaacatttgcttacaccagtggctttgtctacaaaaacctt 1262

                  
Query: 440  ggcact 445
            ||||||
Sbjct: 1261 ggcact 1256

---

>gb|AY084669.1| Arabidopsis thaliana clone 114653 mRNA, complete sequence
          Length = 1746

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                        
Query: 380  gtcatagcttacaaaaccgaagcatttgctggaaccagttgctttgtcaacaaacacctt 439
            ||||||||| ||||||||||| ||||||||   |||||| |||||||| ||||| |||||
Sbjct: 1322 gtcatagctaacaaaaccgaaacatttgcttacaccagtggctttgtctacaaaaacctt 1263

                  
Query: 440  ggcact 445
            ||||||
Sbjct: 1262 ggcact 1257

---

>gb|AC122543.1| Genomic sequence for Brassica oleracea, clone B21H13, complete sequence
          Length = 101563

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                         
Query: 282   ttgttgttgttgtctctcttgagttgtactttgagtttcttgccacctagctggaaaccg 341
             |||||||||||||||||||| || || ||||| |||||||| |||||||  ||| |||| 
Sbjct: 50317 ttgttgttgttgtctctcttaagctggactttcagtttcttaccacctaaatgggaacca 50376

                      
Query: 342   ttcatcatg 350
             |||||||||
Sbjct: 50377 ttcatcatg 50385

---

>gb|AY104506.1| Zea mays PCO080326 mRNA sequence
          Length = 1081

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 49/55 (89%), Gaps = 3/55 (5%)
 Strand = Plus / Minus

                                                                  
Query: 259 tttgtcaaaaaggtttactgtgcttgttgttgttgtctctcttgagttgtacttt 313
           ||||||| |||||||||||||||   ||| |||||||||||||||| ||||||||
Sbjct: 774 tttgtcagaaaggtttactgtgc---ttgctgttgtctctcttgagctgtacttt 723



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 122/155 (78%)
 Strand = Plus / Minus

                                                                       
Query: 384 tagcttacaaaaccgaagcatttgctggaaccagttgctttgtcaacaaacaccttggca 443
           |||||||| ||||| |||||||| ||   ||||||||| ||||| || || || ||||| 
Sbjct: 652 tagcttacgaaaccaaagcatttactaacaccagttgccttgtctacgaaaactttggcg 593

                                                                       
Query: 444 cttattactctaccaaacctctggaaggcatcggagagttcttggtcaccaaattcttgt 503
           || | ||| ||||| || || ||||| |||  ||  || || |||||||| |||||||| 
Sbjct: 592 ctcagtaccctaccgaaactatggaatgcactggcaagatcatggtcaccgaattcttgc 533

                                              
Query: 504 gggatatgatagataaatagattggctccaggagg 538
           ||||| || || || || | |||||||||||||||
Sbjct: 532 gggatgtggtatatgaacaaattggctccaggagg 498

---

>gb|BC045035.1| Xenopus laevis CUG triplet repeat, RNA binding protein 2, mRNA (cDNA
            clone MGC:53221 IMAGE:5543352), complete cds
          Length = 3420

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| ||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 1582 tgtgcagagacaggattgtcatagctaacaaaaccaaagcacttgct 1536

---

>gb|U69547.1|XLU69547 Xenopus laevis RNA binding protein Etr-3 (etr-3) mRNA, complete cds
          Length = 1909

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| ||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 1589 tgtgcagagacaggattgtcatagctaacaaaaccaaagcacttgct 1543

---

>emb|AJ851563.1| Gallus gallus mRNA for hypothetical protein, clone 7f23
          Length = 4552

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 362  ctgtgcagacacagggttgtcatagcttacaaaacc 397
            ||||||||| ||||| |||||||| |||||||||||
Sbjct: 1562 ctgtgcagagacaggattgtcataacttacaaaacc 1527

---

>ref|NM_001012521.1| Gallus gallus CUG triplet repeat, RNA binding protein 1 (CUGBP1),
            mRNA
          Length = 4552

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 362  ctgtgcagacacagggttgtcatagcttacaaaacc 397
            ||||||||| ||||| |||||||| |||||||||||
Sbjct: 1562 ctgtgcagagacaggattgtcataacttacaaaacc 1527

---

>ref|NM_178963.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT4G03110
            transcript variant AT4G03110.2 mRNA, complete cds
          Length = 1847

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 395  accgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcact 445
            |||||| ||||||||   |||||| |||||||| ||||| |||||||||||
Sbjct: 1299 accgaaacatttgcttacaccagtggctttgtctacaaaaaccttggcact 1249

---

>gb|AF069442.1| Arabidopsis thaliana BAC T4I9, chromosome IV, near 17 cM, complete
            sequence
          Length = 98913

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 395  accgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcact 445
            |||||| ||||||||   |||||| |||||||| ||||| |||||||||||
Sbjct: 6487 accgaaacatttgcttacaccagtggctttgtctacaaaaaccttggcact 6437

---

>gb|AC005275.1| Arabidopsis thaliana BAC F4C21 from chromosome IV, top arm, near 17
            cM, complete sequence
          Length = 136335

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                               
Query: 395  accgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcact 445
            |||||| ||||||||   |||||| |||||||| ||||| |||||||||||
Sbjct: 9629 accgaaacatttgcttacaccagtggctttgtctacaaaaaccttggcact 9679

---

>gb|AY288986.1| Gallus gallus ELAV-type RNA-binding protein 3 variant L mRNA,
            complete cds, alternatively spliced
          Length = 1455

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1361 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1315

---

>gb|AY288985.1| Gallus gallus ELAV-type RNA-binding protein 3 variant 4 mRNA,
            complete cds, alternatively spliced
          Length = 1467

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1373 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1327

---

>emb|Y18298.1|MMU18298 Mus musculus mRNA for elav-type RNA-binding protein
          Length = 1485

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1391 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1345

---

>ref|XM_775954.1| PREDICTED: Strongylocentrotus purpuratus similar to bruno-like 6,
           RNA binding protein (LOC575560), mRNA
          Length = 1068

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 375 gggttgtcatagcttacaaaaccgaagcatttgct 409
           ||||||||| |||| |||||||||||||| |||||
Sbjct: 962 gggttgtcaaagctcacaaaaccgaagcacttgct 928

---

>emb|AL161496.2|ATCHRIV8 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 8
          Length = 195429

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 395   accgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcact 445
             |||||| ||||||||   |||||| |||||||| ||||| |||||||||||
Sbjct: 28000 accgaaacatttgcttacaccagtggctttgtctacaaaaaccttggcact 28050

---

>gb|AY065261.1| Arabidopsis thaliana putative ribonucleoprotein (At4g03110) mRNA,
            complete cds
          Length = 1842

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 395  accgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcact 445
            |||||| ||||||||   |||||| |||||||| ||||| |||||||||||
Sbjct: 1275 accgaaacatttgcttacaccagtggctttgtctacaaaaaccttggcact 1225

---

>emb|AJ010386.1|RNO010386 Rattus norvegicus mRNA for ETR-R3b protein, alternatively spliced
            isoform
          Length = 2096

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1730 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1684

---

>emb|AJ010351.1|RNO010351 Rattus norvegicus mRNA for ETR-R3a protein, alternatively spliced
            isoform
          Length = 2547

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1607 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1561

---

>ref|NM_010160.1| Mus musculus CUG triplet repeat, RNA binding protein 2 (Cugbp2), mRNA
          Length = 5446

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1498 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1452

---

>dbj|AK137292.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530098D08 product:CUG triplet
            repeat,RNA binding protein 2, full insert sequence
          Length = 2127

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1565 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1519

---

>dbj|AK151818.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830038L03 product:CUG triplet repeat,RNA
            binding protein 2, full insert sequence
          Length = 2314

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1395 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1349

---

>dbj|AK161349.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930438K20 product:CUG triplet repeat,RNA
           binding protein 2, full insert sequence
          Length = 1241

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 363 tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
           |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 933 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 887

---

>ref|XM_696884.1| PREDICTED: Danio rerio hypothetical protein LOC554850 (LOC554850),
            mRNA
          Length = 2773

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 375  gggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||||||  ||||||||||||| |||||||||||
Sbjct: 1462 gggttgtcgaagcttacaaaaccaaagcatttgct 1428

---

>dbj|AK153267.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830130J01 product:CUG triplet repeat,RNA
            binding protein 2, full insert sequence
          Length = 2314

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1395 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1349

---

>dbj|AK160861.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched
            library, clone:3632429A13 product:CUG triplet repeat,RNA
            binding protein 2, full insert sequence
          Length = 2447

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1606 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1560

---

>dbj|AK164914.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
            library, clone:E030020B06 product:CUG triplet repeat,RNA
            binding protein 2, full insert sequence
          Length = 2526

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1553 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1507

---

>gb|AY052559.1| Xenopus laevis bruno-like protein 3 (brunol-3) mRNA, partial cds
          Length = 997

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 363 tgtgcagacacagggttgtcatagcttacaaaacc 397
           |||||||| ||||| ||||||||||| ||||||||
Sbjct: 35  tgtgcagagacaggattgtcatagctaacaaaacc 1

---

>gb|BC026856.1| Mus musculus CUG triplet repeat, RNA binding protein 2, mRNA (cDNA
            clone MGC:25225 IMAGE:4503295), complete cds
          Length = 3587

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1476 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1430

---

>ref|NM_204260.1| Gallus gallus CUG triplet repeat, RNA binding protein 2 (CUGBP2),
            mRNA
          Length = 1467

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1373 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1327

---

>gb|AF169013.1|AF169013 Rattus norvegicus RNA binding protein NAPOR-3 mRNA, partial cds
          Length = 1634

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 363 tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
           |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 588 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 542

---

>dbj|AK208664.1| Mus musculus cDNA, clone:Y2G0112F20, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000068747, based on BLAT search
          Length = 381

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 372 acagggttgtcatagcttacaaaaccgaagcatttgct 409
           ||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 307 acaggattgtcataacttacaaaaccaaagcanttgct 270

---

>gb|AF090697.1|AF090697 Mus musculus apoptosis-related RNA binding protein (Napor-3) mRNA,
            complete cds
          Length = 5446

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1498 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1452

---

>gb|AF090696.1|AF090696 Mus musculus apoptosis-related RNA binding protein (Napor-1) mRNA,
            complete cds
          Length = 5546

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1598 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1552

---

>gb|AF090695.1|AF090695 Rattus norvegicus apoptosis-related RNA binding protein (NAPOR-3)
            mRNA, complete cds
          Length = 1633

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1498 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1452

---

>ref|NM_017197.1| Rattus norvegicus CUG triplet repeat, RNA binding protein 2 (Cugbp2),
            mRNA
          Length = 2547

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 363  tgtgcagacacagggttgtcatagcttacaaaaccgaagcatttgct 409
            |||||||| || || ||||||||||| |||||||| ||||| |||||
Sbjct: 1607 tgtgcagagactggattgtcatagctaacaaaaccaaagcacttgct 1561

---

>ref|XM_879783.1| PREDICTED: Bos taurus similar to CUG triplet repeat, RNA-binding
            protein 1 isoform 1, transcript variant 8 (LOC540475),
            mRNA
          Length = 2394

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| |||||||||||||| || |||||
Sbjct: 1587 acaggattgtcataacttacaaaaccgaaacacttgct 1550

---

>ref|XM_867177.1| PREDICTED: Bos taurus similar to CUG triplet repeat, RNA-binding
            protein 1 isoform 1, transcript variant 2 (LOC540475),
            mRNA
          Length = 2561

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| |||||||||||||| || |||||
Sbjct: 1626 acaggattgtcataacttacaaaaccgaaacacttgct 1589

---

>ref|XM_879735.1| PREDICTED: Bos taurus similar to CUG triplet repeat, RNA-binding
            protein 1 isoform 1, transcript variant 7 (LOC540475),
            mRNA
          Length = 2570

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| |||||||||||||| || |||||
Sbjct: 1635 acaggattgtcataacttacaaaaccgaaacacttgct 1598

---

>ref|XM_879705.1| PREDICTED: Bos taurus similar to CUG triplet repeat, RNA-binding
            protein 1 isoform 1, transcript variant 6 (LOC540475),
            mRNA
          Length = 2588

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| |||||||||||||| || |||||
Sbjct: 1653 acaggattgtcataacttacaaaaccgaaacacttgct 1616

---

>ref|XM_879679.1| PREDICTED: Bos taurus similar to CUG triplet repeat, RNA-binding
            protein 1 isoform 1, transcript variant 5 (LOC540475),
            mRNA
          Length = 2570

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| |||||||||||||| || |||||
Sbjct: 1635 acaggattgtcataacttacaaaaccgaaacacttgct 1598

---

>ref|XM_611631.2| PREDICTED: Bos taurus similar to CUG triplet repeat, RNA-binding
            protein 1 isoform 1, transcript variant 1 (LOC540475),
            mRNA
          Length = 2291

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| |||||||||||||| || |||||
Sbjct: 1587 acaggattgtcataacttacaaaaccgaaacacttgct 1550

---

>ref|XM_879614.1| PREDICTED: Bos taurus similar to CUG triplet repeat, RNA-binding
            protein 1 isoform 1, transcript variant 4 (LOC540475),
            mRNA
          Length = 2522

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| |||||||||||||| || |||||
Sbjct: 1587 acaggattgtcataacttacaaaaccgaaacacttgct 1550

---

>ref|XM_879584.1| PREDICTED: Bos taurus similar to CUG triplet repeat, RNA-binding
            protein 1 isoform 1, transcript variant 3 (LOC540475),
            mRNA
          Length = 2482

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| |||||||||||||| || |||||
Sbjct: 1587 acaggattgtcataacttacaaaaccgaaacacttgct 1550

---

>ref|NM_198683.1| Mus musculus CUG triplet repeat, RNA binding protein 1 (Cugbp1),
            transcript variant 2, mRNA
          Length = 2197

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 1552 acaggattgtcataacttacaaaaccaaagcacttgct 1515

---

>ref|NM_017368.2| Mus musculus CUG triplet repeat, RNA binding protein 1 (Cugbp1),
            transcript variant 1, mRNA
          Length = 2349

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 1704 acaggattgtcataacttacaaaaccaaagcacttgct 1667

---

>gb|BC021393.1| Mus musculus CUG triplet repeat, RNA binding protein 1, mRNA (cDNA
            clone IMAGE:5068376), with apparent retained intron
          Length = 3324

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 1478 acaggattgtcataacttacaaaaccaaagcacttgct 1441

---

>emb|AJ007987.1|MMU7987 Mus musculus mRNA for deadenylation factor EDEN-BP
          Length = 1461

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 1358 acaggattgtcataacttacaaaaccaaagcacttgct 1321

---

>emb|BX537117.6| Zebrafish DNA sequence from clone CH211-281N15 in linkage group 17,
             complete sequence
          Length = 161999

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 255   attttttgtcaaaaaggtttac 276
             ||||||||||||||||||||||
Sbjct: 74341 attttttgtcaaaaaggtttac 74320

---

>dbj|AK135030.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
           enriched library, clone:6430547M02 product:CUG triplet
           repeat, RNA binding protein 1, full insert sequence
          Length = 2017

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 372 acagggttgtcatagcttacaaaaccgaagcatttgct 409
           ||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 165 acaggattgtcataacttacaaaaccaaagcacttgct 128

---

>dbj|AK143698.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched
            library, clone:F430010P06 product:CUG triplet repeat, RNA
            binding protein 1, full insert sequence
          Length = 3427

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 1567 acaggattgtcataacttacaaaaccaaagcacttgct 1530

---

>dbj|AK156725.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830044E18 product:CUG triplet repeat, RNA
            binding protein 1, full insert sequence
          Length = 3380

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 1526 acaggattgtcataacttacaaaaccaaagcacttgct 1489

---

>dbj|AK014492.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched
            library, clone:4432412L08 product:CUG triplet repeat, RNA
            binding protein 1, full insert sequence
          Length = 3444

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 1529 acaggattgtcataacttacaaaaccaaagcacttgct 1492

---

>gb|AF314172.1|AF314172 Mus musculus BRUNOL2 (Brunol2) mRNA, partial cds
          Length = 1313

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 1210 acaggattgtcataacttacaaaaccaaagcacttgct 1173

---

>gb|AF267535.1|AF267535 Mus musculus CUG-binding protein LYLQ isoform mRNA, complete cds
          Length = 1589

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 372  acagggttgtcatagcttacaaaaccgaagcatttgct 409
            ||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 1369 acaggattgtcataacttacaaaaccaaagcacttgct 1332

---

>dbj|AK196827.1| Mus musculus cDNA, clone:Y1G0123C05, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000068747, based on BLAT search
          Length = 386

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 372 acagggttgtcatagcttacaaaaccgaagcatttgct 409
           ||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 311 acaggattgtcataacttacaaaaccaaagcacttgct 274

---

>dbj|AK183548.1| Mus musculus cDNA, clone:Y0G0126F10, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000068747, based on BLAT search
          Length = 425

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 372 acagggttgtcatagcttacaaaaccgaagcatttgct 409
           ||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 373 acaggattgtcataacttacaaaaccaaagcacttgct 336

---

>gb|AC018631.3| Drosophila melanogaster clone BACR03I06, complete sequence
          Length = 169851

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 258    ttttgtcaaaaaggtttactgtgct 282
              |||||||||||||||| ||||||||
Sbjct: 122659 ttttgtcaaaaaggttaactgtgct 122635

---

>ref|XM_817392.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.70.5420)
           partial mRNA
          Length = 1446

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 283 tgttgttgttgtctctcttga 303
           |||||||||||||||||||||
Sbjct: 752 tgttgttgttgtctctcttga 732

---

>ref|NM_001017152.2| Xenopus tropicalis CUG triplet repeat, RNA binding protein 1
            (cugbp1), mRNA
          Length = 1971

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 378  ttgtcatagcttacaaaaccgaagcatttgctg 410
            |||||||||||||| ||||| || |||||||||
Sbjct: 1511 ttgtcatagcttacgaaaccaaaacatttgctg 1479

---

>emb|AL645691.20| Zebrafish DNA sequence from clone RP71-1L17 in linkage group 4 Contains
              the gene for a novel protein similar to vertebrate pim-1
              oncogene (PIM1) and two CpG islands, complete sequence
          Length = 146489

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 252    atgattttttgtcaaaaaggt 272
              |||||||||||||||||||||
Sbjct: 112008 atgattttttgtcaaaaaggt 111988

---

>gb|AC154879.10| Mus musculus chromosome 1, clone RP24-276N20, complete sequence
          Length = 199527

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 535    gaggtccttctgtttgtgttt 555
              |||||||||||||||||||||
Sbjct: 135435 gaggtccttctgtttgtgttt 135455

---

>gb|AC008989.6| Homo sapiens chromosome 19 clone LLNL-F_219B11, complete sequence
          Length = 44222

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 506   gatatgatagataaatagatt 526
             |||||||||||||||||||||
Sbjct: 10856 gatatgatagataaatagatt 10836

---

>gb|AC163694.2| Mus musculus BAC clone RP24-80O2 from chromosome 16, complete sequence
          Length = 244730

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 288   ttgttgtctctcttgagttgt 308
             |||||||||||||||||||||
Sbjct: 59888 ttgttgtctctcttgagttgt 59868

---

>gb|AC002560.2|AC002560 Genomic sequence for Arabidopsis thaliana BAC F21B7 from chromosome I,
             complete sequence
          Length = 101176

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 395   accgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcactta 447
             |||||| ||||||||   |||||| || ||||| |||||||||||||| ||||
Sbjct: 25173 accgaaacatttgcttataccagtggccttgtctacaaacaccttggcgctta 25225

---

>emb|BX936416.11| Zebrafish DNA sequence from clone CH211-194I16 in linkage group 18,
              complete sequence
          Length = 214763

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 274    tactgtgcttgttgttgttgt 294
              |||||||||||||||||||||
Sbjct: 120025 tactgtgcttgttgttgttgt 120045

---

>emb|CR760913.2| Xenopus tropicalis finished cDNA, clone TEgg064f02
          Length = 1971

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 378  ttgtcatagcttacaaaaccgaagcatttgctg 410
            |||||||||||||| ||||| || |||||||||
Sbjct: 1511 ttgtcatagcttacgaaaccaaaacatttgctg 1479

---

>gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 of 73 of the complete
              sequence
          Length = 585533

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 258    ttttgtcaaaaaggtttactgtgct 282
              |||||||||||||||| ||||||||
Sbjct: 299375 ttttgtcaaaaaggttaactgtgct 299399

---

>emb|CT030641.11| Mouse DNA sequence from clone RP23-32M15 on chromosome 16, complete
             sequence
          Length = 224292

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 288   ttgttgtctctcttgagttgt 308
             |||||||||||||||||||||
Sbjct: 21142 ttgttgtctctcttgagttgt 21162

---

>ref|NM_202023.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G03457
            transcript variant AT1G03457.2 mRNA, complete cds
          Length = 1648

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 396  ccgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcactta 447
            ||||| ||||||||   |||||| || ||||| |||||||||||||| ||||
Sbjct: 1158 ccgaaacatttgcttataccagtggccttgtctacaaacaccttggcgctta 1107

---

>ref|NM_100228.3| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G03457
            transcript variant AT1G03457.1 mRNA, complete cds
          Length = 1640

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 396  ccgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcactta 447
            ||||| ||||||||   |||||| || ||||| |||||||||||||| ||||
Sbjct: 1150 ccgaaacatttgcttataccagtggccttgtctacaaacaccttggcgctta 1099

---

>ref|NM_124994.3| Arabidopsis thaliana unknown protein AT5G56120 mRNA, complete cds
          Length = 1027

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 ttgttgttgttgtctctctt 301
           ||||||||||||||||||||
Sbjct: 156 ttgttgttgttgtctctctt 137

---

>ref|NM_119810.1| Arabidopsis thaliana S-adenosylmethionine-dependent
           methyltransferase AT4G36470 mRNA, complete cds
          Length = 1116

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 ttgttgttgtctctcttgag 304
           ||||||||||||||||||||
Sbjct: 380 ttgttgttgtctctcttgag 361

---

>ref|XM_639566.1| Dictyostelium discoideum hypothetical protein (DDB0217191), partial
           mRNA
          Length = 2238

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 gtgcttgttgttgttgtctc 297
           ||||||||||||||||||||
Sbjct: 118 gtgcttgttgttgttgtctc 99

---

>ref|XM_639501.1| Dictyostelium discoideum hypothetical protein (DDB0185148), partial
           mRNA
          Length = 2238

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 gtgcttgttgttgttgtctc 297
           ||||||||||||||||||||
Sbjct: 118 gtgcttgttgttgttgtctc 99

---

>gb|BC072134.1| Xenopus laevis ribonucleoprotein, mRNA (cDNA clone MGC:79970
            IMAGE:4679790), complete cds
          Length = 2497

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 378  ttgtcatagcttacaaaaccgaagcatttgct 409
            |||||| | |||||||||||||| ||||||||
Sbjct: 1663 ttgtcaaaacttacaaaaccgaaacatttgct 1632

---

>gb|BC073316.1| Xenopus laevis cDNA clone MGC:80719 IMAGE:5511863, complete cds
          Length = 3275

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 501  tgtgggatatgatagataaataga 524
            |||||||||| |||||||||||||
Sbjct: 2814 tgtgggatataatagataaataga 2837

---

>gb|BT014888.1| Arabidopsis thaliana unknown protein (At4g36470) mRNA, complete cds
          Length = 1116

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 ttgttgttgtctctcttgag 304
           ||||||||||||||||||||
Sbjct: 380 ttgttgttgtctctcttgag 361

---

>gb|AC101559.20| Mus musculus chromosome 5, clone RP23-194K16, complete sequence
          Length = 252554

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     ataataaaataacacaatgc 82
              ||||||||||||||||||||
Sbjct: 119250 ataataaaataacacaatgc 119269

---

>gb|BT011992.1| Arabidopsis thaliana At4g36470 mRNA sequence
          Length = 1113

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 ttgttgttgtctctcttgag 304
           ||||||||||||||||||||
Sbjct: 377 ttgttgttgtctctcttgag 358

---

>gb|BC057704.1| Xenopus laevis ribonucleoprotein, mRNA (cDNA clone MGC:68437
            IMAGE:4724645), complete cds
          Length = 3217

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 378  ttgtcatagcttacaaaaccgaagcatttgct 409
            |||||| | |||||||||||||| ||||||||
Sbjct: 1625 ttgtcaaaacttacaaaaccgaaacatttgct 1594

---

>gb|AC102449.7| Mus musculus chromosome 5, clone RP24-216G12, complete sequence
          Length = 172155

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 506   gatatgatagataaatagat 525
             ||||||||||||||||||||
Sbjct: 12822 gatatgatagataaatagat 12841

---

>gb|BT010876.1| Arabidopsis thaliana At5g56120 gene, complete cds
          Length = 711

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 ttgttgttgttgtctctctt 301
           ||||||||||||||||||||
Sbjct: 75  ttgttgttgttgtctctctt 56

---

>gb|AC139183.4| Mus musculus BAC clone RP24-114C21 from chromosome 18, complete sequence
          Length = 147109

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ttgttgttgttgtctctctt 301
              ||||||||||||||||||||
Sbjct: 115319 ttgttgttgttgtctctctt 115338

---

>gb|AC006979.2| Homo sapiens BAC clone GS1-85B12 from 7, complete sequence
          Length = 103563

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 502   gtgggatatgatagataaatagat 525
             |||||| |||||||||||||||||
Sbjct: 14581 gtgggagatgatagataaatagat 14604

---

>gb|AC159889.2| Mus musculus BAC clone RP24-81G6 from chromosome 9, complete sequence
          Length = 154807

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 273   ttactgtgcttgttgttgttgtct 296
             ||||||||||| ||||||||||||
Sbjct: 57037 ttactgtgcttattgttgttgtct 57014

---

>emb|AL591214.8| Human DNA sequence from clone RP11-18I23 on chromosome 9 Contains part
             of one variant of the ROR2 gene for receptor tyrosine
             kinase-like orphan receptor 2, complete sequence
          Length = 66959

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   gcattgtcatcacagatgat 256
             ||||||||||||||||||||
Sbjct: 50378 gcattgtcatcacagatgat 50359

---

>emb|AL512632.8| Human DNA sequence from clone RP11-538O14 on chromosome 10, complete
             sequence
          Length = 42010

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 255   attttttgtcaaaaaggttt 274
             ||||||||||||||||||||
Sbjct: 28453 attttttgtcaaaaaggttt 28434

---

>emb|AL356111.13| Human DNA sequence from clone RP11-501G6 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 150955

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    cttgttgttgttgtctctct 300
              ||||||||||||||||||||
Sbjct: 105234 cttgttgttgttgtctctct 105253

---

>gb|AC078794.13| Homo sapiens 3 BAC RP11-67L2 (Roswell Park Cancer Institute Human BAC
            Library) complete sequence
          Length = 154667

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    attgaatgaatctgacttct 24
            ||||||||||||||||||||
Sbjct: 4855 attgaatgaatctgacttct 4874

---

>emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 2
          Length = 198354

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    ttgttgttgtctctcttgag 304
              ||||||||||||||||||||
Sbjct: 153408 ttgttgttgtctctcttgag 153389

---

>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 249     cagatgattttttgtcaaaa 268
               ||||||||||||||||||||
Sbjct: 4546993 cagatgattttttgtcaaaa 4547012

---

>emb|AL772136.5| Zebrafish DNA sequence from clone CH211-188C22 in linkage group 7
             Contains a novel gene similar PLCB (phospholipase C beta),
             a novel gene similar to PPP1R14B (protein phosphatase 1,
             regulatory inhibitor subunit 14B) and part of a novel gene
             similar to BRMS1 (breast cancer metastasis-suppressor 1),
             complete sequence
          Length = 147497

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 511   gatagataaatagattggctccag 534
             |||||||| |||||||||||||||
Sbjct: 28606 gatagatagatagattggctccag 28629

---

>emb|AL161589.2|ATCHRIV85 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 85
          Length = 198750

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   ttgttgttgtctctcttgag 304
             ||||||||||||||||||||
Sbjct: 97320 ttgttgttgtctctcttgag 97339

---

>emb|AJ238410.1|HSA238410 Homo sapiens partial HLA-DRB1 gene for MHC class II antigen,
           DRB1*04 allele, exon 2
          Length = 221

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 528 gctccaggaggtccttctgtttgt 551
           ||||||||||||||||||| ||||
Sbjct: 170 gctccaggaggtccttctggttgt 147

---

>emb|BX005003.10| Zebrafish DNA sequence from clone DKEY-241F8 in linkage group 13,
             complete sequence
          Length = 172889

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ttgttgttgttgtctctctt 301
             ||||||||||||||||||||
Sbjct: 86477 ttgttgttgttgtctctctt 86458

---

>gb|AC104165.2| Homo sapiens chromosome 3 clone RP11-681O4, complete sequence
          Length = 200956

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    gtttactgtgcttgttgttg 290
              ||||||||||||||||||||
Sbjct: 102711 gtttactgtgcttgttgttg 102692

---

>gb|AC135795.21| Medicago truncatula clone mth2-28g10, complete sequence
          Length = 110937

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   ttttttgtcaaaaaggttta 275
             ||||||||||||||||||||
Sbjct: 86487 ttttttgtcaaaaaggttta 86468

---

>gb|AY191018.1| Dictyostelium discoideum autophagy protein 4 (apg4) gene, complete
           cds
          Length = 2694

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 gtgcttgttgttgttgtctc 297
           ||||||||||||||||||||
Sbjct: 248 gtgcttgttgttgttgtctc 229

---

>ref|NM_137273.2| Drosophila melanogaster CG8060-RA (CG8060), mRNA
          Length = 4003

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 539  tccttctgtttgtgtttggc 558
            ||||||||||||||||||||
Sbjct: 2789 tccttctgtttgtgtttggc 2770

---

>gb|AY061600.1| Drosophila melanogaster SD05384 full length cDNA
          Length = 4022

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 539  tccttctgtttgtgtttggc 558
            ||||||||||||||||||||
Sbjct: 2789 tccttctgtttgtgtttggc 2770

---

>emb|AL844143.17| Mouse DNA sequence from clone RP23-370D19 on chromosome 4, complete
              sequence
          Length = 159305

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 64     taataaaataacacaatgcaacaa 87
              ||||||||||| ||||||||||||
Sbjct: 113818 taataaaataaaacaatgcaacaa 113841

---

>gb|AC151523.4| Medicago truncatula chromosome 7 BAC clone mth2-166j21, complete
             sequence
          Length = 123340

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ttgttgttgttgtctctctt 301
             ||||||||||||||||||||
Sbjct: 31122 ttgttgttgttgtctctctt 31103

---

>gb|AC158774.6| Mus musculus chromosome 18, clone RP23-427N16, complete sequence
          Length = 207351

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ttgttgttgttgtctctctt 301
              ||||||||||||||||||||
Sbjct: 103296 ttgttgttgttgtctctctt 103315

---

>gb|AC157935.3| Mus musculus chromosome 5, clone RP24-228K8, complete sequence
          Length = 147812

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 506   gatatgatagataaatagat 525
             ||||||||||||||||||||
Sbjct: 64567 gatatgatagataaatagat 64548

---

>gb|AC009356.3|AC009356 Drosophila melanogaster, chromosome 2R, region 52E-53A, BAC clone
             BACR25I17, complete sequence
          Length = 157835

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 539   tccttctgtttgtgtttggc 558
             ||||||||||||||||||||
Sbjct: 78866 tccttctgtttgtgtttggc 78885

---

>emb|BX814329.1|CNS0ADRA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB68ZE04 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1609

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 396  ccgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcactta 447
            ||||| ||||||||   |||||| || ||||| |||||||||||||| ||||
Sbjct: 1152 ccgaaacatttgcttataccagtggccttgtctacaaacaccttggcgctta 1101

---

>emb|BX814331.1|CNS0ADSC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB68ZF05 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1598

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 396  ccgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcactta 447
            ||||| ||||||||   |||||| || ||||| |||||||||||||| ||||
Sbjct: 1158 ccgaaacatttgcttataccagtggccttgtctacaaacaccttggcgctta 1107

---

>emb|BX817177.1|CNS0ADAA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH90ZE09 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1571

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 396  ccgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcactta 447
            ||||| ||||||||   |||||| || ||||| |||||||||||||| ||||
Sbjct: 1131 ccgaaacatttgcttataccagtggccttgtctacaaacaccttggcgctta 1080

---

>gb|AC157502.2| Medicago truncatula chromosome 7 BAC clone mte1-56e23, complete
            sequence
          Length = 108844

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 256  ttttttgtcaaaaaggttta 275
            ||||||||||||||||||||
Sbjct: 3190 ttttttgtcaaaaaggttta 3171

---

>gb|AC008230.4|AC008230 Drosophila melanogaster, chromosome 2R, region 53A-53C, BAC clone
             BACR17I17, complete sequence
          Length = 159640

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 539   tccttctgtttgtgtttggc 558
             ||||||||||||||||||||
Sbjct: 55416 tccttctgtttgtgtttggc 55435

---

>gb|AC124787.6| Mus musculus chromosome 18, clone RP24-395J18, complete sequence
          Length = 164628

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    ttgttgttgttgtctctctt 301
              ||||||||||||||||||||
Sbjct: 120858 ttgttgttgttgtctctctt 120877

---

>gb|BT005358.1| Arabidopsis thaliana At1g03457 mRNA, complete cds
          Length = 1290

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 396  ccgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcactta 447
            ||||| ||||||||   |||||| || ||||| |||||||||||||| ||||
Sbjct: 1121 ccgaaacatttgcttataccagtggccttgtctacaaacaccttggcgctta 1070

---

>gb|AC116330.2| Dictyostelium discoideum chromosome 2 map 3191214-3323468 strain AX4,
             complete sequence
          Length = 132254

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   gtgcttgttgttgttgtctc 297
             ||||||||||||||||||||
Sbjct: 51232 gtgcttgttgttgttgtctc 51251

---

>dbj|AK200025.1| Mus musculus cDNA, clone:Y1G0133C06, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000068747, based on BLAT search
          Length = 396

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 372 acagggttgtcatagcttacaaaaccgaagca 403
           ||||| |||||||| ||||||||||| |||||
Sbjct: 321 acaggattgtcataacttacaaaaccaaagca 290

---

>dbj|AK176891.1| Arabidopsis thaliana mRNA for putative protein, complete cds,
           clone: RAFL25-45-H17
          Length = 1175

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 ttgttgttgttgtctctctt 301
           ||||||||||||||||||||
Sbjct: 185 ttgttgttgttgtctctctt 166

---

>dbj|AK117246.1| Arabidopsis thaliana At1g03460 mRNA for putative ribonucleoprotein,
            complete cds, clone: RAFL16-79-N10
          Length = 1641

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 396  ccgaagcatttgctggaaccagttgctttgtcaacaaacaccttggcactta 447
            ||||| ||||||||   |||||| || ||||| |||||||||||||| ||||
Sbjct: 1150 ccgaaacatttgcttataccagtggccttgtctacaaacaccttggcgctta 1099

---

>dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDA7
          Length = 82033

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   ttgttgttgttgtctctctt 301
             ||||||||||||||||||||
Sbjct: 55877 ttgttgttgttgtctctctt 55858

---

>gb|AE003807.3| Drosophila melanogaster chromosome 2R, section 43 of 73 of the complete
              sequence
          Length = 258223

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 539    tccttctgtttgtgtttggc 558
              ||||||||||||||||||||
Sbjct: 114481 tccttctgtttgtgtttggc 114500

---

>dbj|AP001889.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-344L21, complete
             sequence
          Length = 186656

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 282   ttgttgttgttgtctctcttgagttgta 309
             ||||||||||||| | ||||||||||||
Sbjct: 49861 ttgttgttgttgtttttcttgagttgta 49834

---

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 141     attcgctgggcggcacggtg 160
               ||||||||||||||||||||
Sbjct: 2419060 attcgctgggcggcacggtg 2419079

---

>gb|AC004318.1|AC004318 Drosophila melanogaster DNA sequence (P1 DS06464 (D212)), complete
             sequence
          Length = 86188

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 539   tccttctgtttgtgtttggc 558
             ||||||||||||||||||||
Sbjct: 80225 tccttctgtttgtgtttggc 80244

---

>gb|U16800.1|XLU16800 Xenopus laevis elav-type ribonucleoprotein (etr-1) mRNA, complete cds
          Length = 2363

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 378  ttgtcatagcttacaaaaccgaagcatttgct 409
            |||||| | |||||||||||||| ||||||||
Sbjct: 1547 ttgtcaaaacttacaaaaccgaaacatttgct 1516


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,252,226
Number of Sequences: 3902068
Number of extensions: 7252226
Number of successful extensions: 149915
Number of sequences better than 10.0: 135
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 149528
Number of HSP's gapped (non-prelim): 376
length of query: 660
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 637
effective length of database: 17,143,297,704
effective search space: 10920280637448
effective search space used: 10920280637448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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