Clone Name | rbasdg14 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009431.1| Triticum aestivum clone wlmk1.pk0035.e4:fis, full insert mRNA sequence Length = 1652 Score = 228 bits (115), Expect = 6e-57 Identities = 146/155 (94%), Gaps = 1/155 (0%) Strand = Plus / Minus Query: 51 acaaatccagctccgactttatccttccgccttacaaattacatttgatcattccattgc 110 |||||||||||||||||||||| ||| ||| ||||| ||||||||||||||||| |||| Sbjct: 1576 acaaatccagctccgactttattctttcgctttacagattacatttgatcattcggttgc 1517 Query: 111 acttattccgatcttactcgtacccaccagaatacaaggtggggggtcatactttgctgt 170 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1516 acttattccgatcttactcgtacccaccagaatacaagg-ggggggtcatactttgctgt 1458 Query: 171 tcatcgtagctggaggcagaagaagaattacagcc 205 ||||| |||||||||||||||||||||||||||| Sbjct: 1457 tcatcaaagctggaggcagaagaagaattacagcc 1423
>gb|AC157491.12| Mus musculus chromosome 8, clone RP24-289G15, complete sequence Length = 168377 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 ctcctatgctgcaccattacatag 47 ||||||||||||| |||||||||| Sbjct: 95336 ctcctatgctgcatcattacatag 95313
>gb|AC099849.4| Homo sapiens chromosome 18, clone RP11-863N1, complete sequence Length = 200606 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atttgatcattccattgcac 112 |||||||||||||||||||| Sbjct: 137918 atttgatcattccattgcac 137899
>gb|AC023932.11| Homo sapiens chromosome 18, clone RP11-510D21, complete sequence Length = 166125 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 caaattacatttgatcattccatt 108 |||||||||||| ||||||||||| Sbjct: 78514 caaattacattttatcattccatt 78491
>gb|AC006546.9| Homo sapiens chromosome 18 clone p1-1029 map 18q11, complete sequence Length = 79128 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atttgatcattccattgcac 112 |||||||||||||||||||| Sbjct: 66460 atttgatcattccattgcac 66441
>gb|AC006545.3| Homo sapiens chromosome 18 clone p1-1028 map 18q11, complete sequence Length = 78735 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atttgatcattccattgcac 112 |||||||||||||||||||| Sbjct: 52210 atttgatcattccattgcac 52191 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,712,981 Number of Sequences: 3902068 Number of extensions: 1712981 Number of successful extensions: 107271 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107258 Number of HSP's gapped (non-prelim): 12 length of query: 217 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 195 effective length of database: 17,147,199,772 effective search space: 3343703955540 effective search space used: 3343703955540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)