ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasdg03 |
|---|---|
| Clone Library Name | barley_pub |
>GCP5_MACFA (Q95K09) Gamma-tubulin complex component 5 (GCP-5) (Fragment)| Length = 725 Score = 71.6 bits (174), Expect = 2e-12 Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 1/136 (0%) Frame = -1 Query: 657 KLLHFVDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVASDKL 478 KL+HFV++ H Y+M R+ HS E + A LD+++++H YLS+I +C + Sbjct: 590 KLMHFVNSLHNYIMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKV- 648 Query: 477 WALIASRVKTILGLALDFHNVEQT-LGTGGTAASVRARCEMELDRIEKQFDECVVFLLRI 301 + + + +L LAL F + Q LGT R E ++++E F C +FL+ I Sbjct: 649 -SFVKEAIMKVLNLALMFADGWQAGLGTW--------RME-SIEKMESDFKNCHMFLVTI 698 Query: 300 LSFKLNVGHFPHLADL 253 L+ + G FPHL L Sbjct: 699 LNKAVCRGSFPHLESL 714
>GCP5_HUMAN (Q96RT8) Gamma-tubulin complex component 5 (GCP-5)| Length = 1024 Score = 71.6 bits (174), Expect = 2e-12 Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 1/136 (0%) Frame = -1 Query: 657 KLLHFVDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVASDKL 478 KL+HFV++ H Y+M R+ HS E + A LD+++++H YLS+I +C + Sbjct: 889 KLMHFVNSLHNYIMTRILHSTGLEFQHQVEEAKDLDQLIKIHYRYLSTIHDRCLLREKV- 947 Query: 477 WALIASRVKTILGLALDFHNVEQT-LGTGGTAASVRARCEMELDRIEKQFDECVVFLLRI 301 + + + +L LAL F + Q LGT R E ++++E F C +FL+ I Sbjct: 948 -SFVKEAIMKVLNLALMFADGWQAGLGTW--------RME-SIEKMESDFKNCHMFLVTI 997 Query: 300 LSFKLNVGHFPHLADL 253 L+ + G FPHL L Sbjct: 998 LNKAVCRGSFPHLESL 1013
>GCP6_HUMAN (Q96RT7) Gamma-tubulin complex component 6 (GCP-6)| Length = 1819 Score = 60.8 bits (146), Expect = 4e-09 Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 2/156 (1%) Frame = -1 Query: 684 FKQHLIVGQKLLHFVDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQR 505 F+Q + ++ HFV Y+ +++ H W E +A+ L+E+ H YL Sbjct: 1663 FRQLQLFKHEMQHFVKVIQGYIANQILHVTWCEFRARLATVGDLEEIQRAHAEYLHKAVF 1722 Query: 504 QCFVASDKLWALIASRVKTILGLALDFHN--VEQTLGTGGTAASVRARCEMELDRIEKQF 331 + + A + + + +I L L F + + Q G G + + F Sbjct: 1723 RGLLTEKA--APVMNVIHSIFSLVLKFRSQLISQAWGPPGGPRGAEHPNFALMQQSYNTF 1780 Query: 330 DECVVFLLRILSFKLNVGHFPHLADLVTRINYNHYY 223 FL ++++ +N G+ PHL D + RIN+N+YY Sbjct: 1781 KYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNNYY 1816
>GCP3_DROME (Q9XYP8) Gamma-tubulin complex component 3 homolog (Gamma ring| complex protein 91) (dGrip91) (d91p) Length = 917 Score = 52.4 bits (124), Expect = 1e-06 Identities = 23/57 (40%), Positives = 34/57 (59%) Frame = -1 Query: 657 KLLHFVDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVAS 487 +++HF+ YV+ V W EL M ATTLDE++E HE +L +I CFV++ Sbjct: 705 EIMHFIHQMQYYVLFEVIECNWVELQKKMQKATTLDEILEAHEKFLQTILVGCFVSN 761
>SPC97_DICDI (Q95ZG3) Spindle pole body component 97 (Spc97) (DdSpc97)| Length = 1177 Score = 47.8 bits (112), Expect = 3e-05 Identities = 28/149 (18%), Positives = 64/149 (42%) Frame = -1 Query: 669 IVGQKLLHFVDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVA 490 ++ +++HF+ Y+M V W ++ + + ++ T+D+V+ +H +L + +C + Sbjct: 829 LLRHRMIHFLQNLEYYMMLEVLEPNWNKMKNSIKTSKTVDDVIRIHNDFLETCLTECMLT 888 Query: 489 SDKLWALIASRVKTILGLALDFHNVEQTLGTGGTAASVRARCEMELDRIEKQFDECVVFL 310 KL ++ + L + F N + + + + E +F + L Sbjct: 889 DTKLVNILMK----FMSLCITFANFTNEMMQDEKNIDTE-QIKKTISSSENKFHAILKVL 943 Query: 309 LRILSFKLNVGHFPHLADLVTRINYNHYY 223 + L H+ L+ R++YN YY Sbjct: 944 MDTLKSFSKTESNRHMIHLIHRLDYNGYY 972
>GCP3_MOUSE (P58854) Gamma-tubulin complex component 3 (GCP-3)| Length = 905 Score = 47.4 bits (111), Expect = 4e-05 Identities = 19/89 (21%), Positives = 47/89 (52%) Frame = -1 Query: 669 IVGQKLLHFVDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVA 490 I+ +++HF+ Y+ V +W EL + + A LD ++ HEA+L++I +C + Sbjct: 704 ILASEMVHFIHQMQYYITFEVLECSWDELWNRVQQAQDLDHIIAAHEAFLNTITSRCLLD 763 Query: 489 SDKLWALIASRVKTILGLALDFHNVEQTL 403 S+ ++ ++++ + ++ N + + Sbjct: 764 SNS--RVLLNQLRAVFDQIIELQNAQDVM 790
>ALP6_SCHPO (Q9USQ2) Spindle pole body component alp6 (Altered polarity protein| 6) Length = 832 Score = 46.6 bits (109), Expect = 7e-05 Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 15/162 (9%) Frame = -1 Query: 657 KLLHFVDAFHQYVMDRVYHSAWTELCDGMASAT-TLDEVMEVHEAYLSSIQRQCFVASDK 481 +++HFV Y++ V +W EL M TLD +E HE Y++SI + + K Sbjct: 659 EMIHFVCQLQYYILFEVIEISWQELQLAMEKPNATLDTYIEAHEKYVTSITHKGLLGGGK 718 Query: 480 L--WALIASRVKTILGLALDFHNVEQTLGTGGTAASVRARCEMEL--DRIEKQ------- 334 ++ IL + L+FH+ + L + S R R + + D + Q Sbjct: 719 SRNEDSFLHQLHDILKVILNFHDAIELLYNFSCSLSNRIRINVPISTDALAAQYTPIKNE 778 Query: 333 ---FDECVVFLLRILSFKLNVGHFPHLADLVTRINYNHYYMS 217 F E L+ L L P + L R+NYN +Y+S Sbjct: 779 LSNFTEEFQVRLQKLLHGLASHKDPEMRFLSVRLNYNEFYVS 820
>GCP3_XENLA (O73787) Gamma-tubulin complex component 3 homolog (Gamma ring| complex protein 109) (Xgrip109) (x109p) Length = 906 Score = 46.2 bits (108), Expect = 1e-04 Identities = 19/89 (21%), Positives = 45/89 (50%) Frame = -1 Query: 669 IVGQKLLHFVDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVA 490 I+ +++HF+ Y+ V +W EL + + A LD ++ H+ +L +I +C + Sbjct: 705 ILASEMVHFIHQMQYYITFEVLECSWDELWNKVLKAQDLDHIIAAHDVFLDTIISRCLLD 764 Query: 489 SDKLWALIASRVKTILGLALDFHNVEQTL 403 S+ + ++++ + ++F N + L Sbjct: 765 SES--RALLNQLRAVFDQIIEFQNAQDAL 791
>GCP3_HUMAN (Q96CW5) Gamma-tubulin complex component 3 (GCP-3) (Spindle pole| body protein Spc98 homolog) (hSpc98) (hGCP3) (h104p) Length = 907 Score = 45.8 bits (107), Expect = 1e-04 Identities = 19/89 (21%), Positives = 44/89 (49%) Frame = -1 Query: 669 IVGQKLLHFVDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVA 490 I+ +++HF+ Y+ V +W EL + + A LD ++ HE +L +I +C + Sbjct: 706 ILASEMVHFIHQMQYYITFEVLECSWDELWNKVQQAQDLDHIIAAHEVFLDTIISRCLLD 765 Query: 489 SDKLWALIASRVKTILGLALDFHNVEQTL 403 SD + ++++ + ++ N + + Sbjct: 766 SDS--RALLNQLRAVFDQIIELQNAQDAI 792
>SPC98_DICDI (Q95ZG4) Spindle pole body component 98 (Spc98) (DdSpc98)| (Fragment) Length = 812 Score = 42.4 bits (98), Expect = 0.001 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%) Frame = -1 Query: 681 KQHLIVGQKLLHFVDAFHQYVMDRVYHSAWTELCDGM-ASATTLDEVMEVHEAYLSSIQR 505 K HLI+ + ++HF+ F Y+M V +W L + AT LD+++E H YL I Sbjct: 643 KSHLIMNE-MVHFISNFQYYLMFEVLECSWKNLEKFIDQEATDLDQLIEAHHQYLQDICN 701 Query: 504 QCFVA-SDKLWALIASRVKTILGLAL 430 + F++ SD + + I+ L Sbjct: 702 KMFLSNSDSCYECFKKLLSIIIKFTL 727
>GCP2_HUMAN (Q9BSJ2) Gamma-tubulin complex component 2 (GCP-2) (Spindle pole body| protein Spc97 homolog) (hSpc97) (hGCP2) (h103p) Length = 902 Score = 41.2 bits (95), Expect = 0.003 Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 19/160 (11%) Frame = -1 Query: 660 QKLLHFVDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVASDK 481 Q++L+FV Y+M V W L + SA+ +D+V+ H +L + + C + + + Sbjct: 684 QRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASNIDDVLGHHTGFLDTCLKDCMLTNPE 743 Query: 480 LWALIASRV-----------KTILGLALDFHNVEQTLGTG---GTAASVRARCEMELDRI 343 L + + + K + LD QTL G A R EL R Sbjct: 744 LLKVFSKLMSVCVMFTNCMQKFTQSMKLDGELGGQTLEHSTVLGLPAGAEERARKELAR- 802 Query: 342 EKQFDECVVFLLRILSFKLNVGHF-----PHLADLVTRIN 238 K E + + F+ + F HL DL+ R++ Sbjct: 803 -KHLAEHADTVQLVSGFEATINKFDKNFSAHLLDLLARLS 841
>GCP4_MOUSE (Q9D4F8) Gamma-tubulin complex component 4 (GCP-4)| Length = 667 Score = 39.7 bits (91), Expect = 0.009 Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 1/147 (0%) Frame = -1 Query: 642 VDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVASDKLWALIA 463 VD Y+ V S +++L + S + + H+ +LS++ Q F+ ++ + Sbjct: 525 VDNLQYYLQVDVLESQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCL- 583 Query: 462 SRVKTILGLALDFHN-VEQTLGTGGTAASVRARCEMELDRIEKQFDECVVFLLRILSFKL 286 IL L F + V Q LG + R +L + K F L +ILS Sbjct: 584 ---NEILDLCHSFCSLVSQNLGP------LDERGAAQLSILVKGFSRQSSLLFKILSSVR 634 Query: 285 NVGHFPHLADLVTRINYNHYYMSDTGS 205 N LA L+ R++YN YY G+ Sbjct: 635 NHQINSDLAQLLLRLDYNKYYTQAGGT 661
>GCP4_HUMAN (Q9UGJ1) Gamma-tubulin complex component 4 (GCP-4) (hGCP4) (h76p)| (Hgrip76) Length = 667 Score = 39.7 bits (91), Expect = 0.009 Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 1/147 (0%) Frame = -1 Query: 642 VDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVASDKLWALIA 463 VD Y+ V S +++L + S + + H+ +LS++ Q F+ ++ + Sbjct: 525 VDNLQYYLQVDVLESQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCL- 583 Query: 462 SRVKTILGLALDFHN-VEQTLGTGGTAASVRARCEMELDRIEKQFDECVVFLLRILSFKL 286 IL L F + V Q LG + R +L + K F L +ILS Sbjct: 584 ---NEILDLCHSFCSLVSQNLGP------LDERGAAQLSILVKGFSRQSSLLFKILSSVR 634 Query: 285 NVGHFPHLADLVTRINYNHYYMSDTGS 205 N LA L+ R++YN YY G+ Sbjct: 635 NHQINSDLAQLLLRLDYNKYYTQAGGT 661
>GCP2_MOUSE (Q921G8) Gamma-tubulin complex component 2 (GCP-2)| Length = 905 Score = 38.1 bits (87), Expect = 0.026 Identities = 17/61 (27%), Positives = 33/61 (54%) Frame = -1 Query: 660 QKLLHFVDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVASDK 481 Q++L+FV Y+M V W L + SA+ +D+V+ H ++L + + C + + + Sbjct: 684 QRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASNIDDVLGHHISFLDNCLKDCMLTNPE 743 Query: 480 L 478 L Sbjct: 744 L 744
>GCP4_ARATH (Q9M350) Gamma-tubulin complex component 4 homolog| Length = 745 Score = 37.7 bits (86), Expect = 0.034 Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 2/136 (1%) Frame = -1 Query: 624 YVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVASDKLWALIASRVKTI 445 Y+ V S W L + + E++ H+ YLS++ Q F+ + ++ S +K Sbjct: 603 YIQVDVIESQWKVLQTHIHDSQDFTELVGFHQEYLSALISQSFLDIGSVSRILDSIMKLC 662 Query: 444 LGLALDFHNVEQTLGTGGTAASVRARCEMELDRIEKQFDECVVFLLRILSFKLNVG--HF 271 L + N E T EL+ I ++F++ L IL G Sbjct: 663 LQFCWNIENQESNPNTS------------ELENIAEEFNKKSNSLYTILRSSKLAGSQRA 710 Query: 270 PHLADLVTRINYNHYY 223 P L + R+N+N +Y Sbjct: 711 PFLRRFLLRLNFNSFY 726
>ALP4_SCHPO (Q9Y705) Spindle pole body component alp4 (Altered polarity protein| 4) Length = 784 Score = 37.4 bits (85), Expect = 0.045 Identities = 29/141 (20%), Positives = 55/141 (39%) Frame = -1 Query: 657 KLLHFVDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVASDKL 478 ++L FV Y V + W + + +A T+D +M+ H +L + ++C + + +L Sbjct: 640 RMLSFVQKIIYYTTSEVIETHWGKFMGELENARTVDNLMQEHIDFLDTCLKECMLTNSRL 699 Query: 477 WALIASRVKTILGLALDFHNVEQTLGTGGTAASVRARCEMELDRIEKQFDECVVFLLRIL 298 + + + T A + S R L+ E+ FDE + + + Sbjct: 700 LKVQSKLLNTCAMFA--------------SYTSTFTRSLYLLENSEESFDEGRMDKMEEI 745 Query: 297 SFKLNVGHFPHLADLVTRINY 235 + HL LV NY Sbjct: 746 LRRYEDSFSRHLKSLVNACNY 766
>GCP4_MEDTR (Q9SC88) Gamma-tubulin complex component 4 homolog| Length = 739 Score = 32.7 bits (73), Expect = 1.1 Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 2/138 (1%) Frame = -1 Query: 624 YVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVASDKLWALIASRVKTI 445 Y+ V S W L + + E++ H+ YLS++ Q F+ + ++ +K Sbjct: 593 YIQVDVIESQWNILQSHIQDSHDFTELVGFHQEYLSALISQTFLDIGSVSRILDGIMKLC 652 Query: 444 LGLALDFHNVEQTLGTGGTAASVRARCEMELDRIEKQFDECVVFLLRILSFKLNVG--HF 271 L + N + T EL+ I ++F++ L IL G Sbjct: 653 LQFCWNIENQDNFSNTS------------ELEHIAEEFNKKSNSLYTILRSSRLAGSQRT 700 Query: 270 PHLADLVTRINYNHYYMS 217 P L + R+N N ++ S Sbjct: 701 PFLRRFLLRLNLNSFFES 718
>XERC_LISMO (Q8Y7K0) Tyrosine recombinase xerC| Length = 300 Score = 31.6 bits (70), Expect = 2.4 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +3 Query: 3 LHPXXMRSKEDTSSELCGTKTQGIQELLRATSAWPRQVYIHSPQMELKSTY 155 +HP +R T G + +QELL S Q+Y H + LKSTY Sbjct: 243 IHPHMLRHTFATDLLNNGADMRTVQELLGHASLSSTQIYTHVTKEHLKSTY 293
>XERC_LISMF (Q720E4) Tyrosine recombinase xerC| Length = 300 Score = 31.6 bits (70), Expect = 2.4 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +3 Query: 3 LHPXXMRSKEDTSSELCGTKTQGIQELLRATSAWPRQVYIHSPQMELKSTY 155 +HP +R T G + +QELL S Q+Y H + LKSTY Sbjct: 243 IHPHMLRHTFATDLLNNGADMRTVQELLGHASLSSTQIYTHVTKEHLKSTY 293
>XERC_LISIN (Q92C75) Tyrosine recombinase xerC| Length = 300 Score = 31.6 bits (70), Expect = 2.4 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +3 Query: 3 LHPXXMRSKEDTSSELCGTKTQGIQELLRATSAWPRQVYIHSPQMELKSTY 155 +HP +R T G + +QELL S Q+Y H + LKSTY Sbjct: 243 IHPHMLRHTFATDLLNNGADMRTVQELLGHASLSSTQIYTHVTKEHLKSTY 293
>PHLB2_HUMAN (Q86SQ0) Pleckstrin homology-like domain family B member 2 (Protein| LL5-beta) Length = 1253 Score = 31.6 bits (70), Expect = 2.4 Identities = 23/93 (24%), Positives = 45/93 (48%) Frame = -1 Query: 597 AWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVASDKLWALIASRVKTILGLALDFHN 418 A E ++S + D++M+ H QR+ + ++ L R++TIL L ++ Sbjct: 408 ALRERKSSISSISGRDDLMDYHRR-----QREERLREQEMERLERQRLETILSLCAEYTK 462 Query: 417 VEQTLGTGGTAASVRARCEMELDRIEKQFDECV 319 + L TG T V+ + EL++++ +E V Sbjct: 463 PDSRLSTGTTVEDVQ-KINKELEKLQLSDEESV 494
>UREE_STRT2 (Q5M606) Urease accessory protein ureE| Length = 150 Score = 31.2 bits (69), Expect = 3.2 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = +1 Query: 205 ASGVRHVIVIVVDPRDQIREMGKVAHVQLER*DPQEEHDALVELLLDPI 351 A GV +IV+ P+D + EMG AH+ P E DA + L +DP+ Sbjct: 70 AIGVESQDLIVISPKD-MDEMGITAHILGNTHKPIEVKDAKIYLEVDPV 117
>UREE_STRT1 (Q5M1G5) Urease accessory protein ureE| Length = 150 Score = 31.2 bits (69), Expect = 3.2 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = +1 Query: 205 ASGVRHVIVIVVDPRDQIREMGKVAHVQLER*DPQEEHDALVELLLDPI 351 A GV +IV+ P+D + EMG AH+ P E DA + L +DP+ Sbjct: 70 AIGVESQDLIVISPKD-MDEMGITAHILGNTHKPIEVKDAKIYLEVDPV 117
>UREE_STRSL (Q55055) Urease accessory protein ureE| Length = 150 Score = 31.2 bits (69), Expect = 3.2 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = +1 Query: 205 ASGVRHVIVIVVDPRDQIREMGKVAHVQLER*DPQEEHDALVELLLDPI 351 A GV +IV+ P+D + EMG AH+ P E DA + L +DP+ Sbjct: 70 AIGVESQDLIVISPKD-MDEMGITAHILGNTHKPIEVKDAKIYLEVDPV 117
>VGLH_EHV1B (Q6DLH1) Glycoprotein H precursor| Length = 848 Score = 30.8 bits (68), Expect = 4.2 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = +2 Query: 287 SLKDRILKRNTTHSSNCFSIRSNSISHLALTDAAVP--PVPRVCSTLWKSNANPSIVLTR 460 ++KDRI +T F++ + + SH+ LTD P P + S N N ++ T Sbjct: 488 AIKDRITWNSTMREVLFFAVGAAAGSHVILTDEPEPGAPAHKDASLFLSLNRNILLLCTA 547 Query: 461 LAIRAHNLSEATK 499 + +H +S K Sbjct: 548 MCTASHAVSAGLK 560
>VGLH_EHV1 (P68330) Glycoprotein H precursor| Length = 848 Score = 30.8 bits (68), Expect = 4.2 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = +2 Query: 287 SLKDRILKRNTTHSSNCFSIRSNSISHLALTDAAVP--PVPRVCSTLWKSNANPSIVLTR 460 ++KDRI +T F++ + + SH+ LTD P P + S N N ++ T Sbjct: 488 AIKDRITWNSTMREVLFFAVGAAAGSHVILTDEPEPGAPAHKDASLFLSLNRNILLLCTA 547 Query: 461 LAIRAHNLSEATK 499 + +H +S K Sbjct: 548 MCTASHAVSAGLK 560
>UREE_STRVE (Q3S3T7) Urease accessory protein ureE| Length = 150 Score = 30.4 bits (67), Expect = 5.4 Identities = 18/47 (38%), Positives = 26/47 (55%) Frame = +1 Query: 211 GVRHVIVIVVDPRDQIREMGKVAHVQLER*DPQEEHDALVELLLDPI 351 GV +IV+ P+D + EMG AH+ P E DA + L +DP+ Sbjct: 72 GVESQDLIVISPKD-MDEMGITAHILGNTHKPIEVKDAKIYLEVDPV 117
>FTHS_METEX (Q83WS0) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 556 Score = 30.0 bits (66), Expect = 7.1 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +1 Query: 301 DPQEEHDALVELLLDPIQLHLASCPNRCRGPSGAESLLHIV 423 D EH L EL D +Q+ +C + G +GAE+L V Sbjct: 383 DTDAEHARLKELCRDRLQVEAITCKHWAEGGAGAEALAQAV 423
>ANGL4_RAT (Q6TMA8) Angiopoietin-related protein 4 precursor| (Angiopoietin-like 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP) Length = 405 Score = 30.0 bits (66), Expect = 7.1 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +1 Query: 262 EMGKVAHVQLER*DPQEEHDALVELLLDPIQLHLASCPNRCRGPSGAE 405 EM +AH L+ EH L ++ +A+C N C+GP G + Sbjct: 40 EMNLLAHGLLQLGHGLREHVERTRGQLGALERRMAACGNACQGPKGTD 87
>ANGL4_MOUSE (Q9Z1P8) Angiopoietin-related protein 4 precursor| (Angiopoietin-like 4) (Hepatic fibrinogen/angiopoietin-related protein) (HFARP) (Fasting-induced adipose factor) (Secreted protein Bk89) (425O18-1) Length = 410 Score = 30.0 bits (66), Expect = 7.1 Identities = 15/49 (30%), Positives = 24/49 (48%) Frame = +1 Query: 262 EMGKVAHVQLER*DPQEEHDALVELLLDPIQLHLASCPNRCRGPSGAES 408 EM +AH L+ EH L ++ +A+C N C+GP G ++ Sbjct: 40 EMNLLAHGLLQLGHGLREHVERTRGQLGALERRMAACGNACQGPKGKDA 88
>SVF1_EMENI (Q5BH63) Survival factor 1| Length = 546 Score = 29.6 bits (65), Expect = 9.3 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +3 Query: 96 SAWPRQVYIHSPQMELKSTYNPI 164 S WPR V I SPQ+EL + +P+ Sbjct: 413 SPWPRYVTISSPQLELLTKLSPV 435 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,581,621 Number of Sequences: 219361 Number of extensions: 2209927 Number of successful extensions: 5873 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5670 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5867 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7026286028 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
