ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasdg03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_466018.1| Oryza sativa (japonica cultivar-group), mRNA 442 e-121
2dbj|AK121782.1| Oryza sativa (japonica cultivar-group) cDNA clon... 442 e-121
3gb|AY106720.1| Zea mays PCO113091 mRNA sequence 424 e-115
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 178 2e-41
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 178 2e-41
6dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic D... 178 2e-41
7dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic D... 178 2e-41
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 178 2e-41
9emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa... 178 2e-41
10emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa... 178 2e-41
11ref|NM_101907.2| Arabidopsis thaliana transferase, transferring ... 48 0.039
12gb|AC069251.5|AC069251 Genomic sequence for Arabidopsis thaliana... 48 0.039
13gb|AC027665.4|AC027665 Genomic sequence for Arabidopsis thaliana... 48 0.039
14ref|NM_106675.3| Arabidopsis thaliana EMB1427; tubulin binding A... 44 0.62
15gb|AC013264.4| Homo sapiens BAC clone RP11-184N4 from 2, complet... 44 0.62
16gb|AC123726.11| Mus musculus chromosome 3, clone RP23-436F15, co... 42 2.4
17gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete... 42 2.4
18gb|AC018848.6|AC018848 Arabidopsis thaliana chromosome 1 BAC F5I... 42 2.4
19gb|AC154172.4| Mus musculus BAC clone RP23-429K7 from chromosome... 42 2.4
20gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18... 42 2.4
21gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 9.6
22emb|AL109914.16|HSBA27F12 Human DNA sequence from clone RP11-27F... 40 9.6
23gb|BT009330.1| Triticum aestivum clone wlm24.pk0026.a3:fis, full... 40 9.6
24emb|AL114785.1|CNS01BWP Botrytis cinerea strain T4 cDNA library 40 9.6
25emb|AL114137.1|CNS01BEP Botrytis cinerea strain T4 cDNA library 40 9.6
26gb|AC092680.2| Homo sapiens BAC clone RP11-694B12 from 2, comple... 40 9.6
27dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
28dbj|AP001357.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 9.6

>ref|XM_466018.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3627

 Score =  442 bits (223), Expect = e-121
 Identities = 442/515 (85%)
 Strand = Plus / Minus

                                                                        
Query: 188  ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 247
            |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 3351 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 3292

                                                                        
Query: 248  gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatcctc 307
            || || | |||||| |||||||| ||||| || || || ||||||||||||||||||| |
Sbjct: 3291 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatccgc 3232

                                                                        
Query: 308  aagaggaacacgacgcactcgtcgaattgcttctcgatccgatccaactccatctcgcat 367
            | ||| || || ||||||||||| |||||||||||||| |||||||  ||||||||||||
Sbjct: 3231 aggagaaatacaacgcactcgtcaaattgcttctcgatgcgatccacttccatctcgcat 3172

                                                                        
Query: 368  cttgccctaacagatgccgcggtccctccggtgccgagagtttgctccacattgtggaag 427
            |||||| | || | ||  || || || || || || ||||| || || |  |||||||||
Sbjct: 3171 cttgccttgacggctggagcagttccaccagtaccaagagtctgttctatgttgtggaag 3112

                                                                        
Query: 428  tctaacgccaatcccagtatagtcttgactcgactggcgatcagagcccacaacttatcc 487
            || |  |||||||| || || ||||| ||||||||||| || || |||||||||||||| 
Sbjct: 3111 tcaagtgccaatccaagaatggtcttaactcgactggctatgagggcccacaacttatca 3052

                                                                        
Query: 488  gaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaacttccatgact 547
            ||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||
Sbjct: 3051 gaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaacttccatgact 2992

                                                                        
Query: 548  tcatctaatgtagtagcagatgccatgccatcacaaagctcagtccacgcactatgatac 607
            ||||| | |||||| || |||||||||||||||||||||||||||||||||||||| || 
Sbjct: 2991 tcatccagtgtagtggcggatgccatgccatcacaaagctcagtccacgcactatggtat 2932

                                                                        
Query: 608  actcggtccatgacatattgatgaaatgcatcgacaaaatggaggagcttctgccctact 667
            || || |||||||||||||||||||||||||| |||||||| |||||||||||| | |||
Sbjct: 2931 acccgatccatgacatattgatgaaatgcatcaacaaaatgaaggagcttctgctcaact 2872

                                               
Query: 668  attaagtgttgtttaaaattaggcgtcgtgctgcc 702
            ||||| ||||| ||||||||| || | ||||||||
Sbjct: 2871 attaaatgttgcttaaaattatgcatagtgctgcc 2837



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>dbj|AK121782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093P19, full
            insert sequence
          Length = 3628

 Score =  442 bits (223), Expect = e-121
 Identities = 442/515 (85%)
 Strand = Plus / Minus

                                                                        
Query: 188  ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 247
            |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 3352 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 3293

                                                                        
Query: 248  gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatcctc 307
            || || | |||||| |||||||| ||||| || || || ||||||||||||||||||| |
Sbjct: 3292 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatccgc 3233

                                                                        
Query: 308  aagaggaacacgacgcactcgtcgaattgcttctcgatccgatccaactccatctcgcat 367
            | ||| || || ||||||||||| |||||||||||||| |||||||  ||||||||||||
Sbjct: 3232 aggagaaatacaacgcactcgtcaaattgcttctcgatgcgatccacttccatctcgcat 3173

                                                                        
Query: 368  cttgccctaacagatgccgcggtccctccggtgccgagagtttgctccacattgtggaag 427
            |||||| | || | ||  || || || || || || ||||| || || |  |||||||||
Sbjct: 3172 cttgccttgacggctggagcagttccaccagtaccaagagtctgttctatgttgtggaag 3113

                                                                        
Query: 428  tctaacgccaatcccagtatagtcttgactcgactggcgatcagagcccacaacttatcc 487
            || |  |||||||| || || ||||| ||||||||||| || || |||||||||||||| 
Sbjct: 3112 tcaagtgccaatccaagaatggtcttaactcgactggctatgagggcccacaacttatca 3053

                                                                        
Query: 488  gaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaacttccatgact 547
            ||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||
Sbjct: 3052 gaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaacttccatgact 2993

                                                                        
Query: 548  tcatctaatgtagtagcagatgccatgccatcacaaagctcagtccacgcactatgatac 607
            ||||| | |||||| || |||||||||||||||||||||||||||||||||||||| || 
Sbjct: 2992 tcatccagtgtagtggcggatgccatgccatcacaaagctcagtccacgcactatggtat 2933

                                                                        
Query: 608  actcggtccatgacatattgatgaaatgcatcgacaaaatggaggagcttctgccctact 667
            || || |||||||||||||||||||||||||| |||||||| |||||||||||| | |||
Sbjct: 2932 acccgatccatgacatattgatgaaatgcatcaacaaaatgaaggagcttctgctcaact 2873

                                               
Query: 668  attaagtgttgtttaaaattaggcgtcgtgctgcc 702
            ||||| ||||| ||||||||| || | ||||||||
Sbjct: 2872 attaaatgttgcttaaaattatgcatagtgctgcc 2838



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>gb|AY106720.1| Zea mays PCO113091 mRNA sequence
          Length = 916

 Score =  424 bits (214), Expect = e-115
 Identities = 433/506 (85%)
 Strand = Plus / Minus

                                                                       
Query: 182 cgggacccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttg 241
           ||||||||||| || |||| |||||| ||  | ||||||||| ||||||||||||| |||
Sbjct: 708 cgggacccaggaatagcagagaagctcccactatcagacatgaaatagtgattgtaattg 649

                                                                       
Query: 242 atcctcgtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagatagg 301
           ||||| || || | ||| || |||||||| || || ||||| || |||||||||||||||
Sbjct: 648 atccttgtaactagatcggcaagatgggggaaatgacccacattgagcttgaaagatagg 589

                                                                       
Query: 302 atcctcaagaggaacacgacgcactcgtcgaattgcttctcgatccgatccaactccatc 361
           ||||||| ||| || | ||| ||||| || ||||||||||| ||||| || |  ||||||
Sbjct: 588 atcctcaggagaaatatgacacactcatcaaattgcttctcaatccggtcgatttccatc 529

                                                                       
Query: 362 tcgcatcttgccctaacagatgccgcggtccctccggtgccgagagtttgctccacattg 421
           ||||||| || ||| |||| ||  || ||||| ||||| | ||||||||| || ||||||
Sbjct: 528 tcgcatcgtgtcctcacagctgaagccgtcccaccggtactgagagtttgttctacattg 469

                                                                       
Query: 422 tggaagtctaacgccaatcccagtatagtcttgactcgactggcgatcagagcccacaac 481
           |||||||| |  |||||||| || |||||||| ||||||||||| || || ||||||| |
Sbjct: 468 tggaagtccagtgccaatccaagaatagtcttaactcgactggcaatgagggcccacagc 409

                                                                       
Query: 482 ttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaacttcc 541
           ||||| |||||||||||||||||||  ||||||||||| ||||||||||| |||||||||
Sbjct: 408 ttatcagaggccacaaagcattgtcgttgaatagaagagagatatgcctcgtgaacttcc 349

                                                                       
Query: 542 atgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtccacgcacta 601
           ||||||||||| | ||| |||||||  | |||||||||||||||||||||||| ||||||
Sbjct: 348 atgacttcatccagtgtggtagcagccgtcatgccatcacaaagctcagtccatgcacta 289

                                                                       
Query: 602 tgatacactcggtccatgacatattgatgaaatgcatcgacaaaatggaggagcttctgc 661
           ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| 
Sbjct: 288 tgataaactcggtccatgacatactgatgaaatgcatcgacaaaatggaggagcttctgt 229

                                     
Query: 662 cctactattaagtgttgtttaaaatt 687
            | ||||||| ||||||||| |||||
Sbjct: 228 gccactattaggtgttgtttgaaatt 203



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  178 bits (90), Expect = 2e-41
 Identities = 117/126 (92%)
 Strand = Plus / Minus

                                                                            
Query: 478      caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 537
                ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 25644451 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 25644392

                                                                            
Query: 538      ttccatgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtccacgc 597
                ||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||||
Sbjct: 25644391 ttccatgacttcatccagtgtagtggcggatgccatgccatcacaaagctcagtccacgc 25644332

                      
Query: 598      actatg 603
                ||||||
Sbjct: 25644331 actatg 25644326



 Score =  113 bits (57), Expect = 8e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                            
Query: 188      ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 247
                |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 25644945 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 25644886

                                                                         
Query: 248      gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 304
                || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 25644885 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 25644829



 Score =  107 bits (54), Expect = 5e-20
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                            
Query: 614      tccatgacatattgatgaaatgcatcgacaaaatggaggagcttctgccctactattaag 673
                |||||||||||||||||||||||||| |||||||| |||||||||||| | |||||||| 
Sbjct: 25644245 tccatgacatattgatgaaatgcatcaacaaaatgaaggagcttctgctcaactattaaa 25644186

                                          
Query: 674      tgttgtttaaaattaggcgtcgtgct 699
                ||||| ||||||||| |||| |||||
Sbjct: 25644185 tgttgcttaaaattatgcgtagtgct 25644160



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                      
Query: 320      acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 373
                ||||||||||| |||||||||||||| |||||||  |||||||| |||||||||
Sbjct: 25644706 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcacatcttgcc 25644653



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  178 bits (90), Expect = 2e-41
 Identities = 117/126 (92%)
 Strand = Plus / Plus

                                                                            
Query: 478      caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 537
                ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 19111189 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 19111248

                                                                            
Query: 538      ttccatgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtccacgc 597
                ||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||||
Sbjct: 19111249 ttccatgacttcatccagtgtagtggcggatgccatgccatcacaaagctcagtccacgc 19111308

                      
Query: 598      actatg 603
                ||||||
Sbjct: 19111309 actatg 19111314



 Score =  113 bits (57), Expect = 8e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                            
Query: 188      ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 247
                |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 19110696 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 19110755

                                                                         
Query: 248      gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 304
                || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 19110756 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 19110812



 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                            
Query: 614      tccatgacatattgatgaaatgcatcgacaaaatggaggagcttctgccctactattaag 673
                |||||||||||||||||||||||||| |||||||| |||||||||||| | |||||||| 
Sbjct: 19111395 tccatgacatattgatgaaatgcatcaacaaaatgaaggagcttctgctcaactattaaa 19111454

                                             
Query: 674      tgttgtttaaaattaggcgtcgtgctgcc 702
                ||||| ||||||||| || | ||||||||
Sbjct: 19111455 tgttgcttaaaattatgcatagtgctgcc 19111483



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                      
Query: 320      acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 373
                ||||||||||| |||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 19110928 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcgcatcttgcc 19110981



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>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0415B12
          Length = 157419

 Score =  178 bits (90), Expect = 2e-41
 Identities = 117/126 (92%)
 Strand = Plus / Plus

                                                                        
Query: 478  caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 537
            ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 9438 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 9497

                                                                        
Query: 538  ttccatgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtccacgc 597
            ||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||||
Sbjct: 9498 ttccatgacttcatccagtgtagtggcggatgccatgccatcacaaagctcagtccacgc 9557

                  
Query: 598  actatg 603
            ||||||
Sbjct: 9558 actatg 9563



 Score =  113 bits (57), Expect = 8e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                        
Query: 188  ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 247
            |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 8945 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 9004

                                                                     
Query: 248  gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 304
            || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 9005 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 9061



 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                        
Query: 614  tccatgacatattgatgaaatgcatcgacaaaatggaggagcttctgccctactattaag 673
            |||||||||||||||||||||||||| |||||||| |||||||||||| | |||||||| 
Sbjct: 9644 tccatgacatattgatgaaatgcatcaacaaaatgaaggagcttctgctcaactattaaa 9703

                                         
Query: 674  tgttgtttaaaattaggcgtcgtgctgcc 702
            ||||| ||||||||| || | ||||||||
Sbjct: 9704 tgttgcttaaaattatgcatagtgctgcc 9732



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                  
Query: 320  acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 373
            ||||||||||| |||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 9177 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcgcatcttgcc 9230



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>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0047A17
          Length = 149142

 Score =  178 bits (90), Expect = 2e-41
 Identities = 117/126 (92%)
 Strand = Plus / Plus

                                                                          
Query: 478    caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 537
              ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 116710 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 116769

                                                                          
Query: 538    ttccatgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtccacgc 597
              ||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||||
Sbjct: 116770 ttccatgacttcatccagtgtagtggcggatgccatgccatcacaaagctcagtccacgc 116829

                    
Query: 598    actatg 603
              ||||||
Sbjct: 116830 actatg 116835



 Score =  113 bits (57), Expect = 8e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                          
Query: 188    ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 247
              |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 116217 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 116276

                                                                       
Query: 248    gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 304
              || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 116277 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 116333



 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                          
Query: 614    tccatgacatattgatgaaatgcatcgacaaaatggaggagcttctgccctactattaag 673
              |||||||||||||||||||||||||| |||||||| |||||||||||| | |||||||| 
Sbjct: 116916 tccatgacatattgatgaaatgcatcaacaaaatgaaggagcttctgctcaactattaaa 116975

                                           
Query: 674    tgttgtttaaaattaggcgtcgtgctgcc 702
              ||||| ||||||||| || | ||||||||
Sbjct: 116976 tgttgcttaaaattatgcatagtgctgcc 117004



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                    
Query: 320    acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 373
              ||||||||||| |||||||||||||| |||||||  ||||||||||||||||||
Sbjct: 116449 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcgcatcttgcc 116502



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  178 bits (90), Expect = 2e-41
 Identities = 117/126 (92%)
 Strand = Plus / Minus

                                                                            
Query: 478      caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 537
                ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 25572627 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 25572568

                                                                            
Query: 538      ttccatgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtccacgc 597
                ||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||||
Sbjct: 25572567 ttccatgacttcatccagtgtagtggcggatgccatgccatcacaaagctcagtccacgc 25572508

                      
Query: 598      actatg 603
                ||||||
Sbjct: 25572507 actatg 25572502



 Score =  113 bits (57), Expect = 8e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                            
Query: 188      ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 247
                |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 25573121 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 25573062

                                                                         
Query: 248      gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 304
                || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 25573061 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 25573005



 Score =  107 bits (54), Expect = 5e-20
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                            
Query: 614      tccatgacatattgatgaaatgcatcgacaaaatggaggagcttctgccctactattaag 673
                |||||||||||||||||||||||||| |||||||| |||||||||||| | |||||||| 
Sbjct: 25572421 tccatgacatattgatgaaatgcatcaacaaaatgaaggagcttctgctcaactattaaa 25572362

                                          
Query: 674      tgttgtttaaaattaggcgtcgtgct 699
                ||||| ||||||||| |||| |||||
Sbjct: 25572361 tgttgcttaaaattatgcgtagtgct 25572336



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                      
Query: 320      acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 373
                ||||||||||| |||||||||||||| |||||||  |||||||| |||||||||
Sbjct: 25572882 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcacatcttgcc 25572829



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>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 167131

 Score =  178 bits (90), Expect = 2e-41
 Identities = 117/126 (92%)
 Strand = Plus / Minus

                                                                         
Query: 478   caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 537
             ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 11689 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 11630

                                                                         
Query: 538   ttccatgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtccacgc 597
             ||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||||
Sbjct: 11629 ttccatgacttcatccagtgtagtggcggatgccatgccatcacaaagctcagtccacgc 11570

                   
Query: 598   actatg 603
             ||||||
Sbjct: 11569 actatg 11564



 Score =  113 bits (57), Expect = 8e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                         
Query: 188   ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 247
             |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 12183 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 12124

                                                                      
Query: 248   gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 304
             || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 12123 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 12067



 Score =  107 bits (54), Expect = 5e-20
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                         
Query: 614   tccatgacatattgatgaaatgcatcgacaaaatggaggagcttctgccctactattaag 673
             |||||||||||||||||||||||||| |||||||| |||||||||||| | |||||||| 
Sbjct: 11483 tccatgacatattgatgaaatgcatcaacaaaatgaaggagcttctgctcaactattaaa 11424

                                       
Query: 674   tgttgtttaaaattaggcgtcgtgct 699
             ||||| ||||||||| |||| |||||
Sbjct: 11423 tgttgcttaaaattatgcgtagtgct 11398



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                   
Query: 320   acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 373
             ||||||||||| |||||||||||||| |||||||  |||||||| |||||||||
Sbjct: 11944 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcacatcttgcc 11891



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>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127003

 Score =  178 bits (90), Expect = 2e-41
 Identities = 117/126 (92%)
 Strand = Plus / Plus

                                                                         
Query: 478   caacttatccgaggccacaaagcattgtctctgaatagaagaaagatatgcctcatgaac 537
             ||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||
Sbjct: 29267 caacttatcagaggccacaaagcattgtcgctgaatagaagagaggtatgcttcatgaac 29326

                                                                         
Query: 538   ttccatgacttcatctaatgtagtagcagatgccatgccatcacaaagctcagtccacgc 597
             ||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||||
Sbjct: 29327 ttccatgacttcatccagtgtagtggcggatgccatgccatcacaaagctcagtccacgc 29386

                   
Query: 598   actatg 603
             ||||||
Sbjct: 29387 actatg 29392



 Score =  113 bits (57), Expect = 8e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                         
Query: 188   ccagggatcgcagtgaagcttccggtgtcagacatgtaatagtgattgtagttgatcctc 247
             |||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 28773 ccagggatggcagagaagcttccgctgtcagacatgtaatagtggttgtaattgattctc 28832

                                                                      
Query: 248   gtgaccaaatccgcgagatggggaaagtggcccacgttcagcttgaaagataggatc 304
             || || | |||||| |||||||| ||||| || || || ||||||||||||||||||
Sbjct: 28833 gtaacgagatccgccagatgggggaagtgaccaacattgagcttgaaagataggatc 28889



 Score =  107 bits (54), Expect = 5e-20
 Identities = 78/86 (90%)
 Strand = Plus / Plus

                                                                         
Query: 614   tccatgacatattgatgaaatgcatcgacaaaatggaggagcttctgccctactattaag 673
             |||||||||||||||||||||||||| |||||||| |||||||||||| | |||||||| 
Sbjct: 29473 tccatgacatattgatgaaatgcatcaacaaaatgaaggagcttctgctcaactattaaa 29532

                                       
Query: 674   tgttgtttaaaattaggcgtcgtgct 699
             ||||| ||||||||| |||| |||||
Sbjct: 29533 tgttgcttaaaattatgcgtagtgct 29558



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 320   acgcactcgtcgaattgcttctcgatccgatccaactccatctcgcatcttgcc 373
             ||||||||||| |||||||||||||| |||||||  |||||||| |||||||||
Sbjct: 29012 acgcactcgtcaaattgcttctcgatgcgatccacttccatctcacatcttgcc 29065



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>ref|NM_101907.2| Arabidopsis thaliana transferase, transferring glycosyl groups /
            tubulin binding AT1G20570 mRNA, complete cds
          Length = 2931

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 614  tccatgacatattgatgaaatgcatcgacaaaatggaggagctt 657
            ||||| || ||||||||||| ||||| ||||||| |||||||||
Sbjct: 2498 tccattacgtattgatgaaaagcatccacaaaattgaggagctt 2455



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                        
Query: 204  agcttccggtgtcagacatgtaatagtgattgtagttgatcctcgtgaccaaatccgcga 263
            ||||||| |||||||||||||| |  | |||||| ||||| || || |||||||| || |
Sbjct: 2908 agcttccagtgtcagacatgtagtgataattgtaattgattctggtcaccaaatcagcca 2849

                               
Query: 264  gatggggaaagtggcccac 282
            |||| || ||||| |||||
Sbjct: 2848 gatgagggaagtgtcccac 2830



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>gb|AC069251.5|AC069251 Genomic sequence for Arabidopsis thaliana BAC F2D10 from chromosome I,
             complete sequence
          Length = 143879

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 614   tccatgacatattgatgaaatgcatcgacaaaatggaggagctt 657
             ||||| || ||||||||||| ||||| ||||||| |||||||||
Sbjct: 13198 tccattacgtattgatgaaaagcatccacaaaattgaggagctt 13241



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                         
Query: 204   agcttccggtgtcagacatgtaatagtgattgtagttgatcctcgtgaccaaatccgcga 263
             ||||||| |||||||||||||| |  | |||||| ||||| || || |||||||| || |
Sbjct: 12499 agcttccagtgtcagacatgtagtgataattgtaattgattctggtcaccaaatcagcca 12558

                                
Query: 264   gatggggaaagtggcccac 282
             |||| || ||||| |||||
Sbjct: 12559 gatgagggaagtgtcccac 12577



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>gb|AC027665.4|AC027665 Genomic sequence for Arabidopsis thaliana BAC F5M15 from chromosome I,
             complete sequence
          Length = 99231

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 614   tccatgacatattgatgaaatgcatcgacaaaatggaggagctt 657
             ||||| || ||||||||||| ||||| ||||||| |||||||||
Sbjct: 41917 tccattacgtattgatgaaaagcatccacaaaattgaggagctt 41874



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                         
Query: 204   agcttccggtgtcagacatgtaatagtgattgtagttgatcctcgtgaccaaatccgcga 263
             ||||||| |||||||||||||| |  | |||||| ||||| || || |||||||| || |
Sbjct: 42616 agcttccagtgtcagacatgtagtgataattgtaattgattctggtcaccaaatcagcca 42557

                                
Query: 264   gatggggaaagtggcccac 282
             |||| || ||||| |||||
Sbjct: 42556 gatgagggaagtgtcccac 42538



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>ref|NM_106675.3| Arabidopsis thaliana EMB1427; tubulin binding AT1G80260 (EMB1427)
            mRNA, complete cds
          Length = 3195

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 592  ccacgcactatgatacactcggtccatgacatattgatgaaatgcatcgacaaaatggag 651
            ||||||| | ||||| || | |||||| || ||||||||||| ||||| ||||| | |||
Sbjct: 2572 ccacgcagtgtgatataccctgtccattacgtattgatgaaaagcatccacaaagttgag 2513

                  
Query: 652  gagctt 657
            ||||||
Sbjct: 2512 gagctt 2507



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>gb|AC013264.4| Homo sapiens BAC clone RP11-184N4 from 2, complete sequence
          Length = 149445

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 129   ccacaaatggagctgaaaagca 150
             ||||||||||||||||||||||
Sbjct: 53521 ccacaaatggagctgaaaagca 53500



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>gb|AC123726.11| Mus musculus chromosome 3, clone RP23-436F15, complete sequence
          Length = 224297

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 61     aaacccaaggaattcaggaac 81
              |||||||||||||||||||||
Sbjct: 111724 aaacccaaggaattcaggaac 111744



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>gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete sequence
          Length = 150214

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 406   agtttgctccacattgtggaagtct 430
             |||||||||||| ||||||||||||
Sbjct: 56861 agtttgctccactttgtggaagtct 56837



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>gb|AC018848.6|AC018848 Arabidopsis thaliana chromosome 1 BAC F5I6 genomic sequence, complete
            sequence
          Length = 132990

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 613  gtccatgacatattgatgaaatgcatcgacaaaatggaggagctt 657
            |||||| || ||||||||||| ||||| ||||| | |||||||||
Sbjct: 7218 gtccattacgtattgatgaaaagcatccacaaagttgaggagctt 7174



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>gb|AC154172.4| Mus musculus BAC clone RP23-429K7 from chromosome 18, complete sequence
          Length = 209529

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 543   tgacttcatctaatgtagtag 563
             |||||||||||||||||||||
Sbjct: 29390 tgacttcatctaatgtagtag 29410



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>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence, complete
              sequence
          Length = 116905

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                           
Query: 613    gtccatgacatattgatgaaatgcatcgacaaaatggaggagctt 657
              |||||| || ||||||||||| ||||| ||||| | |||||||||
Sbjct: 116461 gtccattacgtattgatgaaaagcatccacaaagttgaggagctt 116417



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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 238     gttgatcctcgtgaccaaatccgc 261
               |||||||||||||| |||||||||
Sbjct: 2090024 gttgatcctcgtgatcaaatccgc 2090047



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>emb|AL109914.16|HSBA27F12 Human DNA sequence from clone RP11-27F12 on chromosome 6p22.3-24
             Contains the 5' end of a novel gene, complete sequence
          Length = 123489

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 35    tacatcctcagaattgtgtggtac 58
             |||||||||||||||||| |||||
Sbjct: 88856 tacatcctcagaattgtgaggtac 88879



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>gb|BT009330.1| Triticum aestivum clone wlm24.pk0026.a3:fis, full insert mRNA
            sequence
          Length = 1958

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 552  ctaatgtagtagcagatgcc 571
            ||||||||||||||||||||
Sbjct: 1282 ctaatgtagtagcagatgcc 1263



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>emb|AL114785.1|CNS01BWP Botrytis cinerea strain T4 cDNA library
          Length = 840

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 300 ggatcctcaagaggaacacg 319
           ||||||||||||||||||||
Sbjct: 223 ggatcctcaagaggaacacg 204



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>emb|AL114137.1|CNS01BEP Botrytis cinerea strain T4 cDNA library
          Length = 660

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 300 ggatcctcaagaggaacacg 319
           ||||||||||||||||||||
Sbjct: 203 ggatcctcaagaggaacacg 184



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>gb|AC092680.2| Homo sapiens BAC clone RP11-694B12 from 2, complete sequence
          Length = 200028

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    ccacaaagcattgtctctga 511
              ||||||||||||||||||||
Sbjct: 187344 ccacaaagcattgtctctga 187363



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>dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1642C07
          Length = 206004

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 552   ctaatgtagtagcagatgcc 571
             ||||||||||||||||||||
Sbjct: 58887 ctaatgtagtagcagatgcc 58868



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>dbj|AP001357.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-807E13, complete
             sequence
          Length = 182382

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 163   tcaaggctgctgccgagcac 182
             ||||||||||||||||||||
Sbjct: 52440 tcaaggctgctgccgagcac 52421


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,281,535
Number of Sequences: 3902068
Number of extensions: 5281535
Number of successful extensions: 85531
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85380
Number of HSP's gapped (non-prelim): 151
length of query: 702
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 679
effective length of database: 17,143,297,704
effective search space: 11640299141016
effective search space used: 11640299141016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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