>ZN363_HUMAN (Q96PM5) RING finger and CHY zinc finger domain-containing protein|
           1 (Zinc finger protein 363) (CH-rich-interacting match
           with PLAG1) (Androgen receptor N-terminal-interacting
           protein)
          Length = 261

 Score = 73.9 bits (180), Expect = 5e-13
 Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
 Frame = -1

Query: 746 CLKEMKEHCQFACPLCSKSVCDMSKAWERLDAELAT--LSNSFDDKMVRILCNDCGAVSE 573
           C +EM +   + CPLC  S  DM++ W +LD E+A   + + + +  V ILCNDC   S 
Sbjct: 172 CYEEMLKE-GYRCPLCMHSALDMTRYWRQLDDEVAQTPMPSEYQNMTVDILCNDCNGRST 230

Query: 572 VQFHLIAHKCHSCKSYNTRQ 513
           VQFH++  KC  C+SYNT Q
Sbjct: 231 VQFHILGMKCKICESYNTAQ 250

>ZN363_MOUSE (Q9CR50) RING finger and CHY zinc finger domain-containing protein|
           1 (Zinc finger protein 363) (CH-rich-interacting match
           with PLAG1) (Androgen receptor N-terminal-interacting
           protein)
          Length = 261

 Score = 73.6 bits (179), Expect = 6e-13
 Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
 Frame = -1

Query: 746 CLKEMKEHCQFACPLCSKSVCDMSKAWERLDAELAT--LSNSFDDKMVRILCNDCGAVSE 573
           C +EM +   + CPLC  S  DM++ W +LD E+A   + + + +  V ILCNDC   S 
Sbjct: 172 CYEEMLKE-GYRCPLCMHSALDMTRYWRQLDTEVAQTPMPSEYQNVTVDILCNDCNGRST 230

Query: 572 VQFHLIAHKCHSCKSYNTRQ 513
           VQFH++  KC  C SYNT Q
Sbjct: 231 VQFHILGMKCKLCDSYNTAQ 250

>RF1_PYRKO (Q5JGK6) Peptide chain release factor subunit 1 (Translation|
           termination factor aRF1)
          Length = 415

 Score = 33.1 bits (74), Expect = 0.95
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
 Frame = -1

Query: 683 DMSKAWERLDAELATLSNSFDDKMVRILCNDCG-----AVSEVQFHLIAHKCHSCKSYNT 519
           ++ KA E    +   +S  +D   VR  CN+CG      +SE +FH+   +   C    +
Sbjct: 302 EVRKALELGAVDKLLISEGYDKVRVRAKCNNCGWEELKTMSEGEFHVYKKQLTHCPKCGS 361

Query: 518 RQI*SSEPWRDSTFFLEVGERAPA-VEIDS 432
           + I + E W  +   +++ E + A VEI S
Sbjct: 362 QNI-TFEKWDVAEELIKMAEESGADVEIIS 390

>NASB_BACSU (P42433) Assimilatory nitrate reductase electron transfer subunit|
          Length = 770

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = +2

Query: 248 FYQMPRCAKICKA*SVTRKLL----HTEQKETMQKQMKDNQKAAANCGGCR*TVQ 400
           F  MP    IC+  +VT+  +    HT    T++ ++K   KA  +CGGC+  V+
Sbjct: 403 FESMPSSETICQCNTVTKGAIEDAVHTNSLTTVE-EVKHCTKATGSCGGCKPLVE 456

>RF1_PYRAB (Q9V151) Peptide chain release factor subunit 1 (Translation|
           termination factor aRF1)
          Length = 417

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
 Frame = -1

Query: 752 EKCLKEMKEHCQFACPLCSKSVCDMSKAWERLDAELATLSNSFDDKMVRILCNDCG---- 585
           +K + E  +H      L +    ++ +A E    +   +S  +D   VR  CN CG    
Sbjct: 282 KKLVNEFLKHVVKDTGLATYGEREVRRALEIGAVDTLLISEGYDKVRVRAKCNHCGWEEL 341

Query: 584 -AVSEVQFHLIAHKCHSCKSYNTRQI*SSEPWRDSTFFLEVGERAPA-VEIDS 432
             +SE +F +   K   C    ++ + + E W  +   +++ E A + VEI S
Sbjct: 342 KTMSEEEFEVYKKKLTRCPKCGSQNL-TIEKWDVAEELIKMAEEAGSDVEIIS 393

>RF1_PYRFU (Q8U0J4) Peptide chain release factor subunit 1 (Translation|
           termination factor aRF1)
          Length = 420

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
 Frame = -1

Query: 683 DMSKAWERLDAELATLSNSFDDKMVRILCNDCG-----AVSEVQFHLIAHKCHSCKSYNT 519
           ++ KA E    +   +S  +D   V + CN+CG      +SE ++     +  +C    +
Sbjct: 305 EVRKALELGAVDTLLISEGYDKVRVHVKCNNCGWEELKTMSEEEYEAYKKRIQTCPKCGS 364

Query: 518 RQI*SSEPWRDSTFFLEVGERAPA-VEIDS 432
           + + + E W  +   +++ E A + VEI S
Sbjct: 365 QNL-TFEKWEVAEELIKIAEEAGSNVEIIS 393

>RF1_PYRHO (O59264) Peptide chain release factor subunit 1 (Translation|
           termination factor aRF1)
          Length = 417

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
 Frame = -1

Query: 752 EKCLKEMKEHCQFACPLCSKSVCDMSKAWERLDAELATLSNSFDDKMVRILCNDCG---- 585
           +K + E  +H      L +    ++ +A E    ++  +S  ++   VR+ CN CG    
Sbjct: 282 KKLVNEFLKHVVKDTGLATYGEREVRRALEIGAVDVLLISEGYNKVRVRVKCNHCGWEEL 341

Query: 584 -AVSEVQFHLIAHKCHSCKSYNTRQI*SSEPWRDSTFFLEVGERAPA-VEIDS 432
             +SE ++ +   K   C    ++ + + E W  +   +++ E A + VEI S
Sbjct: 342 KTMSEEEYEVYRKKITKCPKCGSQNL-TIEKWDVAEELIKMAEEAGSDVEIIS 393

>PDE1B_CRIGR (Q64395) Calcium/calmodulin-dependent 3',5'-cyclic nucleotide|
           phosphodiesterase 1B (EC 3.1.4.17) (Cam-PDE 1B)
           (Fragment)
          Length = 199

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 589 QSLHNMRTILSSKEFDRVASSASSLSHAFDMSHTDLEQSGHANW 720
           Q + +M+T L   E    + + S L HA D+SH   + S H++W
Sbjct: 149 QQVKSMKTALQQLERIDKSKALSLLLHAADISHPTKQWSVHSHW 192


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,760,151
Number of Sequences: 219361
Number of extensions: 2319691
Number of successful extensions: 6592
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6588
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 7902193040
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)