>VHS_HHV2H (P68340) Virion host shutoff protein|
          Length = 492

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = +1

Query: 7   PPXKVRTAXAVAITSH----GTRPRHCFHQAPHHLGRTPSRIGIDKLTKHHY 150
           PP  V+   A  +  H      R RH  H AP  L   P  + I +L +H Y
Sbjct: 366 PPELVQVPNAQRVAEHRGYVAGRRRHVIHDAPEALDWLPDPMTIAELVEHRY 417

>VHS_HHV2G (P68339) Virion host shutoff protein|
          Length = 492

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = +1

Query: 7   PPXKVRTAXAVAITSH----GTRPRHCFHQAPHHLGRTPSRIGIDKLTKHHY 150
           PP  V+   A  +  H      R RH  H AP  L   P  + I +L +H Y
Sbjct: 366 PPELVQVPNAQRVAEHRGYVAGRRRHVIHDAPEALDWLPDPMTIAELVEHRY 417

>VHS_HHV11 (P10225) Virion host shutoff protein|
          Length = 489

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
 Frame = +1

Query: 7   PPXKVRTAXAVAITSH----GTRPRHCFHQAPHHLGRTPSRIGIDKLTKHHY 150
           PP  V+   A  +  H        RH  H AP  L   P  + I +L +H Y
Sbjct: 363 PPELVQVPNAQLLEEHRSYVANPRRHVIHDAPESLDWLPDPMTITELVEHRY 414

>DPM1_USTMA (P54856) Dolichol-phosphate mannosyltransferase (EC 2.4.1.83)|
           (Dolichol-phosphate mannose synthase)
           (Dolichyl-phosphate beta-D-mannosyltransferase)
           (Mannose-P-dolichol synthase) (MPD synthase) (DPM
           synthase)
          Length = 294

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 67  RHCFHQAPHHLGRTPSRIGIDKLTKHHYH 153
           +H FH A HH+     +I +D L K   H
Sbjct: 195 KHSFHTADHHINAQGFKIALDLLVKSGVH 223

>POLG_JAEVJ (P32886) Genome polyprotein [Contains: Capsid protein C (Core|
            protein); Envelope protein M (Matrix protein); Major
            envelope protein E; Nonstructural protein 1 (NS1);
            Nonstructural protein 2A (NS2A); Flavivirin protease NS2B
            regulatory subunit;
          Length = 3432

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 120  NSRWCTAEVVWGLVKTMSWPRAVTSDGDG 34
            N  W     V+G VK+ +WP   T  GDG
Sbjct: 1001 NDTWKLERAVFGEVKSCTWPETHTLWGDG 1029

>POLG_JAEVN (P14403) Genome polyprotein [Contains: Capsid protein C (Core|
            protein); Envelope protein M (Matrix protein); Major
            envelope protein E; Nonstructural protein 1 (NS1);
            Nonstructural protein 2A (NS2A); Flavivirin protease NS2B
            regulatory subunit;
          Length = 1440

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 120  NSRWCTAEVVWGLVKTMSWPRAVTSDGDG 34
            N  W     V+G VK+ +WP   T  GDG
Sbjct: 929  NDTWKLERAVFGEVKSCTWPETHTLWGDG 957


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,716,697
Number of Sequences: 219361
Number of extensions: 364475
Number of successful extensions: 1423
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1423
length of database: 80,573,946
effective HSP length: 27
effective length of database: 74,651,199
effective search space used: 1791628776
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)