ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasde24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY109843.1| Zea mays CL6204_1 mRNA sequence 210 5e-51
2dbj|AK062289.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 2e-50
3gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome... 86 2e-13
4gb|AC105319.2| Oryza sativa (japonica cultivar-group) chromosome... 86 2e-13
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
6ref|NM_117645.1| Arabidopsis thaliana unknown protein AT4G15545 ... 58 4e-05
7ref|NM_104486.3| Arabidopsis thaliana unknown protein AT1G56080 ... 58 4e-05
8emb|Z97339.2|ATFCA4 Arabidopsis thaliana DNA chromosome 4, ESSA ... 58 4e-05
9gb|BT000212.1| Arabidopsis thaliana expressed protein (At4g15545... 58 4e-05
10emb|AL161542.2|ATCHRIV42 Arabidopsis thaliana DNA chromosome 4, ... 58 4e-05
11gb|AY136431.1| Arabidopsis thaliana expressed protein (At4g15545... 58 4e-05
12gb|AY057742.1| Arabidopsis thaliana AT4g15540/dl3810w mRNA, comp... 58 4e-05
13gb|AY057513.1| Arabidopsis thaliana AT4g15540/dl3810w mRNA, comp... 58 4e-05
14gb|AY039512.1| Arabidopsis thaliana AT4g15540/dl3810w mRNA, comp... 58 4e-05
15emb|BX813521.1|CNS0ADPT Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
16emb|BX814284.1|CNS0ADRR Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
17emb|BX826600.1|CNS0A38J Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
18emb|BX826693.1|CNS0A35H Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
19emb|BX826550.1|CNS0A35F Arabidopsis thaliana Full-length cDNA Co... 58 4e-05
20gb|AY087027.1| Arabidopsis thaliana clone 307 mRNA, complete seq... 58 4e-05
21emb|AL161541.2|ATCHRIV41 Arabidopsis thaliana DNA chromosome 4, ... 58 4e-05
22dbj|AP006382.1| Lotus japonicus genomic DNA, chromosome 4, clone... 58 4e-05
23emb|BX827078.1|CNS0A36S Arabidopsis thaliana Full-length cDNA Co... 56 2e-04
24gb|AC146553.12| Medicago truncatula clone mth2-9e24, complete se... 52 0.003
25emb|BX827448.1|CNS0A2RP Arabidopsis thaliana Full-length cDNA Co... 50 0.011
26ref|XM_469117.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.17
27gb|AC129338.2| Homo sapiens BAC clone RP11-51A19 from UL, comple... 46 0.17
28gb|AC124008.4| Homo sapiens BAC clone RP11-529E24 from 7, comple... 46 0.17
29dbj|AK062366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.17
30gb|AC007861.5| Homo sapiens chromosome 16 clone RP11-189E14, com... 44 0.66
31gb|AC023725.5| Drosophila melanogaster X BAC RP98-9I10 (Roswell ... 44 0.66
32gb|AC105352.2| Drosophila melanogaster X BAC RP98-45O17 (Roswell... 44 0.66
33gb|DQ404154.1| Tetrahymena thermophila dynein heavy chain 23 gen... 44 0.66
34gb|AC107403.6| Drosophila melanogaster X BAC RP98-21M21 (Roswell... 44 0.66
35gb|AC007614.7| Homo sapiens chromosome 16 clone RP11-491F9, comp... 44 0.66
36gb|AE003429.4| Drosophila melanogaster chromosome X, section 13 ... 44 0.66
37emb|CR937029.1| M.truncatula DNA sequence from clone MTH2-105B15... 42 2.6
38gb|AC008467.7| Homo sapiens chromosome 5 clone CTC-364D2, comple... 42 2.6
39gb|AC093423.2| Homo sapiens chromosome 1 clone RP11-413E1, compl... 42 2.6
40gb|AC174443.3| Mus musculus BAC clone RP24-298O17 from chromosom... 42 2.6
41gb|AC175830.2| Mus musculus BAC clone RP24-74O10 from chromosome... 42 2.6
42emb|CR378661.1| M.truncatula DNA sequence from clone XX-10B15, c... 42 2.6
43gb|AC171684.1| Mus musculus BAC clone RP23-69D21 from chromosome... 42 2.6 
>gb|AY109843.1| Zea mays CL6204_1 mRNA sequence
          Length = 760

 Score =  210 bits (106), Expect = 5e-51
 Identities = 181/206 (87%)
 Strand = Plus / Plus

                                                                       
Query: 258 gtgtacaagtcactgttttcagggccaaagatcgcatcagcctttcttagtgtatcctct 317
           ||||||| |||  |||||||||| ||||||||| |||||||||||||||  |||||||||
Sbjct: 227 gtgtacaggtccttgttttcaggaccaaagatctcatcagcctttcttaaggtatcctct 286

                                                                       
Query: 318 ctggtctgcttgtgtgcattcagttccttcacgttggctaggaatgcgctgaactgctca 377
           ||||||||| ||||||| ||||| |||||||| || || |||||||| |  |||||||||
Sbjct: 287 ctggtctgcctgtgtgcgttcagctccttcacattagccaggaatgcaccaaactgctca 346

                                                                       
Query: 378 taagacaagcggtttctgacttggcgaaagaactcttttccatcaactcgtgttcgtcct 437
           || ||||| || |||||||| || ||||||||||| ||||||||||||| ||||||||||
Sbjct: 347 tacgacaatcgatttctgacatgacgaaagaactcctttccatcaactcttgttcgtcct 406

                                     
Query: 438 gtttgacttggtgtgtcaaatggaga 463
           ||||||||||| | ||||||||||||
Sbjct: 407 gtttgacttggagggtcaaatggaga 432



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 92/111 (82%), Gaps = 1/111 (0%)
 Strand = Plus / Plus

                                                                       
Query: 641 cggggtggcctggccacatctggctcagcatggctactttcctctgaagcagaacttgca 700
           ||||||||||| |   ||||||| ||| | |||||| ||||||||||| | ||||| |||
Sbjct: 599 cggggtggcctaggtgcatctggttcaacttggctattttcctctgaaactgaactcgca 658

                                                              
Query: 701 gtttcaaacaactgtgatgatttaagaagttggaaatgctgaatcgtcatc 751
           |||||  | | ||||||||||||  |||||||||||||| ||||| |||||
Sbjct: 659 gtttctgaaatctgtgatgattt-ggaagttggaaatgcagaatcttcatc 708



 Score = 50.1 bits (25), Expect = 0.011
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 531 gagattgaatgtctccttggtggtgagagtggtgcataaccccttggaggtgagtct 587
           ||||||||||||| ||| || ||||| |  | |||||||| ||||||||||||||||
Sbjct: 491 gagattgaatgtcgcctcggcggtgataccgatgcataacgccttggaggtgagtct 547
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>dbj|AK062289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-E05, full
           insert sequence
          Length = 745

 Score =  208 bits (105), Expect = 2e-50
 Identities = 204/237 (86%)
 Strand = Plus / Minus

                                                                       
Query: 232 tgcgggtaattagactctcaaagatagtgtacaagtcactgttttcagggccaaagatcg 291
           |||| |||||||| | ||||||||| ||||| | |||  |||| || || ||||| ||  
Sbjct: 518 tgcgagtaattaggccctcaaagatggtgtataggtccttgttatctggaccaaatattt 459

                                                                       
Query: 292 catcagcctttcttagtgtatcctctctggtctgcttgtgtgcattcagttccttcacgt 351
           | |||||||| ||||||||||||||||||||||| |||||||  ||||  ||||| || |
Sbjct: 458 cgtcagccttccttagtgtatcctctctggtctgtttgtgtgagttcaactcctttacat 399

                                                                       
Query: 352 tggctaggaatgcgctgaactgctcataagacaagcggtttctgacttggcgaaagaact 411
           ||||||| ||||| |||||||||||||||||||| |||||||||||||| || |||||||
Sbjct: 398 tggctagaaatgcactgaactgctcataagacaaacggtttctgacttgacggaagaact 339

                                                                    
Query: 412 cttttccatcaactcgtgttcgtcctgtttgacttggtgtgtcaaatggagatgtca 468
           |||||||||||||||||||||||||||| ||||||  ||  ||||||||||||||||
Sbjct: 338 cttttccatcaactcgtgttcgtcctgtgtgacttcctgcatcaaatggagatgtca 282



 Score =  107 bits (54), Expect = 5e-20
 Identities = 116/134 (86%), Gaps = 2/134 (1%)
 Strand = Plus / Minus

                                                                       
Query: 572 ccttggaggtgagtctgggggagtaagcttttggtgtgcttgttgtacgatggcatatat 631
           |||||||||||||||||||||||||| | || ||||| || |||||||||||||| | ||
Sbjct: 181 ccttggaggtgagtctgggggagtaaccctt-ggtgtact-gttgtacgatggcaaaaat 124

                                                                       
Query: 632 acatgcgagcggggtggcctggccacatctggctcagcatggctactttcctctgaagca 691
           ||||| |  |||||||||||||  |||||||||||| |||| ||||||||||||||  | 
Sbjct: 123 acatgtggacggggtggcctgggtacatctggctcaacatgactactttcctctgagact 64

                         
Query: 692 gaacttgcagtttc 705
           |||||||| |||||
Sbjct: 63  gaacttgcggtttc 50
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>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11,
             complete sequence
          Length = 102567

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                         
Query: 313   cctctctggtctgcttgtgtgcattcagttccttcacgttggctaggaatgcgctgaact 372
             ||||||||||||| |||||||  ||||  ||||| || |||||||| ||||| |||||||
Sbjct: 95245 cctctctggtctgtttgtgtgagttcaactcctttacattggctagaaatgcactgaact 95186

                                    
Query: 373   gctcataagacaagcggtttctg 395
             ||||||||||||| |||||||||
Sbjct: 95185 gctcataagacaaacggtttctg 95163



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                           
Query: 393   ctgacttggcgaaagaactcttttccatcaactcgtgttcgtcctg 438
             |||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 94702 ctgacttgacggaagaactcttttccatcaactcgtgttcgtcctg 94657



 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 72/82 (87%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                         
Query: 572   ccttggaggtgagtctgggggagtaagcttttggtgtgcttgttgtacgatggcatatat 631
             |||||||||||||||||||||||||| |  ||||||| | ||||||||||||||| | ||
Sbjct: 93868 ccttggaggtgagtctgggggagtaa-cccttggtgtac-tgttgtacgatggcaaaaat 93811

                                   
Query: 632   acatgcgagcggggtggcctgg 653
             ||||| |  |||||||||||||
Sbjct: 93810 acatgtggacggggtggcctgg 93789



 Score = 50.1 bits (25), Expect = 0.011
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 657   catctggctcagcatggctactttcctctgaagcagaacttgcagtttc 705
             ||||||||||| |||| ||||||||||||||  | |||||||| |||||
Sbjct: 93693 catctggctcaacatgactactttcctctgagactgaacttgcggtttc 93645
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>gb|AC105319.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
           OJ1657_H11, complete sequence
          Length = 98103

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                       
Query: 313 cctctctggtctgcttgtgtgcattcagttccttcacgttggctaggaatgcgctgaact 372
           ||||||||||||| |||||||  ||||  ||||| || |||||||| ||||| |||||||
Sbjct: 355 cctctctggtctgtttgtgtgagttcaactcctttacattggctagaaatgcactgaact 296

                                  
Query: 373 gctcataagacaagcggtttctg 395
           ||||||||||||| |||||||||
Sbjct: 295 gctcataagacaaacggtttctg 273
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                            
Query: 313      cctctctggtctgcttgtgtgcattcagttccttcacgttggctaggaatgcgctgaact 372
                ||||||||||||| |||||||  ||||  ||||| || |||||||| ||||| |||||||
Sbjct: 19635346 cctctctggtctgtttgtgtgagttcaactcctttacattggctagaaatgcactgaact 19635287

                                       
Query: 373      gctcataagacaagcggtttctg 395
                ||||||||||||| |||||||||
Sbjct: 19635286 gctcataagacaaacggtttctg 19635264



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                              
Query: 393      ctgacttggcgaaagaactcttttccatcaactcgtgttcgtcctg 438
                |||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 19634803 ctgacttgacggaagaactcttttccatcaactcgtgttcgtcctg 19634758



 Score = 67.9 bits (34), Expect = 5e-08
 Identities = 72/82 (87%), Gaps = 2/82 (2%)
 Strand = Plus / Minus

                                                                            
Query: 572      ccttggaggtgagtctgggggagtaagcttttggtgtgcttgttgtacgatggcatatat 631
                |||||||||||||||||||||||||| |  ||||||| | ||||||||||||||| | ||
Sbjct: 19633969 ccttggaggtgagtctgggggagtaa-cccttggtgtac-tgttgtacgatggcaaaaat 19633912

                                      
Query: 632      acatgcgagcggggtggcctgg 653
                ||||| |  |||||||||||||
Sbjct: 19633911 acatgtggacggggtggcctgg 19633890



 Score = 50.1 bits (25), Expect = 0.011
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                 
Query: 657      catctggctcagcatggctactttcctctgaagcagaacttgcagtttc 705
                ||||||||||| |||| ||||||||||||||  | |||||||| |||||
Sbjct: 19633794 catctggctcaacatgactactttcctctgagactgaacttgcggtttc 19633746
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>ref|NM_117645.1| Arabidopsis thaliana unknown protein AT4G15545 mRNA, complete cds
          Length = 1216

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 372 tgctcataagacaagcggtttctgacttggcgaaagaactcttttccatcaac 424
           ||||| ||||| || ||| | |||||||| |||||||||||||||||||||||
Sbjct: 875 tgctcgtaagataatcggctcctgacttgtcgaaagaactcttttccatcaac 823
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>ref|NM_104486.3| Arabidopsis thaliana unknown protein AT1G56080 mRNA, complete cds
          Length = 1305

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 339 agttccttcacgttggctaggaatgcgctgaactgctcataagacaagcggtttctgact 398
           |||||||| | ||| || |||||||| |||||||| || |||||||| ||| | ||| ||
Sbjct: 894 agttccttgatgttagccaggaatgcactgaactgttcgtaagacaaacggctcctggct 835

                                    
Query: 399 tggcgaaagaactcttttccatcaa 423
           || | |||||||||||| |||||||
Sbjct: 834 tgtctaaagaactctttcccatcaa 810
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>emb|Z97339.2|ATFCA4 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 4
          Length = 205065

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 372   tgctcataagacaagcggtttctgacttggcgaaagaactcttttccatcaac 424
             ||||| ||||| || ||| | |||||||| |||||||||||||||||||||||
Sbjct: 45965 tgctcgtaagataatcggctcctgacttgtcgaaagaactcttttccatcaac 45913
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>gb|BT000212.1| Arabidopsis thaliana expressed protein (At4g15545) mRNA, complete
           cds
          Length = 1165

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 372 tgctcataagacaagcggtttctgacttggcgaaagaactcttttccatcaac 424
           ||||| ||||| || ||| | |||||||| |||||||||||||||||||||||
Sbjct: 863 tgctcgtaagataatcggctcctgacttgtcgaaagaactcttttccatcaac 811
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>emb|AL161542.2|ATCHRIV42 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 42
          Length = 195068

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 372  tgctcataagacaagcggtttctgacttggcgaaagaactcttttccatcaac 424
            ||||| ||||| || ||| | |||||||| |||||||||||||||||||||||
Sbjct: 3019 tgctcgtaagataatcggctcctgacttgtcgaaagaactcttttccatcaac 2967
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>gb|AY136431.1| Arabidopsis thaliana expressed protein (At4g15545) mRNA, complete
           cds
          Length = 1218

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 372 tgctcataagacaagcggtttctgacttggcgaaagaactcttttccatcaac 424
           ||||| ||||| || ||| | |||||||| |||||||||||||||||||||||
Sbjct: 875 tgctcgtaagataatcggctcctgacttgtcgaaagaactcttttccatcaac 823
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>gb|AY057742.1| Arabidopsis thaliana AT4g15540/dl3810w mRNA, complete cds
          Length = 1014

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 372 tgctcataagacaagcggtttctgacttggcgaaagaactcttttccatcaac 424
           ||||| ||||| || ||| | |||||||| |||||||||||||||||||||||
Sbjct: 863 tgctcgtaagataatcggctcctgacttgtcgaaagaactcttttccatcaac 811
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>gb|AY057513.1| Arabidopsis thaliana AT4g15540/dl3810w mRNA, complete cds
          Length = 1217

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 372 tgctcataagacaagcggtttctgacttggcgaaagaactcttttccatcaac 424
           ||||| ||||| || ||| | |||||||| |||||||||||||||||||||||
Sbjct: 873 tgctcgtaagataatcggctcctgacttgtcgaaagaactcttttccatcaac 821
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>gb|AY039512.1| Arabidopsis thaliana AT4g15540/dl3810w mRNA, complete cds
          Length = 1214

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 372 tgctcataagacaagcggtttctgacttggcgaaagaactcttttccatcaac 424
           ||||| ||||| || ||| | |||||||| |||||||||||||||||||||||
Sbjct: 870 tgctcgtaagataatcggctcctgacttgtcgaaagaactcttttccatcaac 818
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>emb|BX813521.1|CNS0ADPT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB21ZG02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1239

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 339 agttccttcacgttggctaggaatgcgctgaactgctcataagacaagcggtttctgact 398
           |||||||| | ||| || |||||||| |||||||| || |||||||| ||| | ||| ||
Sbjct: 825 agttccttgatgttagccaggaatgcactgaactgttcgtaagacaaacggctcctggct 766

                                    
Query: 399 tggcgaaagaactcttttccatcaa 423
           || | |||||||||||| |||||||
Sbjct: 765 tgtctaaagaactctttcccatcaa 741
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>emb|BX814284.1|CNS0ADRR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB66ZB04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1293

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 339 agttccttcacgttggctaggaatgcgctgaactgctcataagacaagcggtttctgact 398
           |||||||| | ||| || |||||||| |||||||| || |||||||| ||| | ||| ||
Sbjct: 894 agttccttgatgttagccaggaatgcactgaactgttcgtaagacaaacggctcctggct 835

                                    
Query: 399 tggcgaaagaactcttttccatcaa 423
           || | |||||||||||| |||||||
Sbjct: 834 tgtctaaagaactctttcccatcaa 810
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>emb|BX826600.1|CNS0A38J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB46ZB08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 934

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 372 tgctcataagacaagcggtttctgacttggcgaaagaactcttttccatcaac 424
           ||||| ||||| || ||| | |||||||| |||||||||||||||||||||||
Sbjct: 635 tgctcgtaagataatcggctcctgacttgtcgaaagaactcttttccatcaac 583
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>emb|BX826693.1|CNS0A35H Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB55ZG07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1166

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 372 tgctcataagacaagcggtttctgacttggcgaaagaactcttttccatcaac 424
           ||||| ||||| || ||| | |||||||| |||||||||||||||||||||||
Sbjct: 859 tgctcgtaagataatcggctcctgacttgtcgaaagaactcttttccatcaac 807
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>emb|BX826550.1|CNS0A35F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB39ZC11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1146

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 372 tgctcataagacaagcggtttctgacttggcgaaagaactcttttccatcaac 424
           ||||| ||||| || ||| | |||||||| |||||||||||||||||||||||
Sbjct: 859 tgctcgtaagataatcggctcctgacttgtcgaaagaactcttttccatcaac 807
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>gb|AY087027.1| Arabidopsis thaliana clone 307 mRNA, complete sequence
          Length = 1216

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 372 tgctcataagacaagcggtttctgacttggcgaaagaactcttttccatcaac 424
           ||||| ||||| || ||| | |||||||| |||||||||||||||||||||||
Sbjct: 875 tgctcgtaagataatcggctcctgacttgtcgaaagaactcttttccatcaac 823
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>emb|AL161541.2|ATCHRIV41 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 41
          Length = 197419

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                   
Query: 372    tgctcataagacaagcggtttctgacttggcgaaagaactcttttccatcaac 424
              ||||| ||||| || ||| | |||||||| |||||||||||||||||||||||
Sbjct: 195438 tgctcgtaagataatcggctcctgacttgtcgaaagaactcttttccatcaac 195386
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>dbj|AP006382.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT32J05, TM0238,
             complete sequence
          Length = 131947

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 393   ctgacttggcgaaagaactcttttccatcaactcgtgttcgtcct 437
             |||||||||||||||||||| ||||| || || ||||||||||||
Sbjct: 18414 ctgacttggcgaaagaactcctttccgtccacccgtgttcgtcct 18370
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>emb|BX827078.1|CNS0A36S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB92ZD05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1157

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 393 ctgacttggcgaaagaactcttttccatcaac 424
           |||||||| |||||||||||||||||||||||
Sbjct: 824 ctgacttgtcgaaagaactcttttccatcaac 793
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>gb|AC146553.12| Medicago truncatula clone mth2-9e24, complete sequence
          Length = 136675

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 393   ctgacttggcgaaagaactcttttccatcaactcgtgttcgt 434
             |||||||||||||||||||| |||||||| || || ||||||
Sbjct: 95181 ctgacttggcgaaagaactcctttccatccacccgagttcgt 95222
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>emb|BX827448.1|CNS0A2RP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS56ZE12 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1154

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 372 tgctcataagacaagcggtttctgacttggcgaaagaactcttttccatcaac 424
           ||||| ||||| || ||| | |||||||| ||||||| |||||||||||||||
Sbjct: 862 tgctcgtaagataatcggctcctgacttgtcgaaagagctcttttccatcaac 810
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>ref|XM_469117.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1303

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                       
Query: 282 ccaaagatcgcatcagcctttcttagtgtatcctctctggtctgcttgtgtgcattcagt 341
           ||||||||| | ||||||||  | || ||||||||||| |  ||||| || ||||| |||
Sbjct: 950 ccaaagatctcttcagccttcttgagagtatcctctcttgattgcttatgagcattgagt 891

                                  
Query: 342 tccttcacgttggctaggaatgc 364
           ||||| | |||||||| ||||||
Sbjct: 890 tccttgatgttggctaagaatgc 868
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>gb|AC129338.2| Homo sapiens BAC clone RP11-51A19 from UL, complete sequence
          Length = 169277

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 714  gtgatgatttaagaagttggaaa 736
            |||||||||||||||||||||||
Sbjct: 7670 gtgatgatttaagaagttggaaa 7692
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>gb|AC124008.4| Homo sapiens BAC clone RP11-529E24 from 7, complete sequence
          Length = 166555

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 714    gtgatgatttaagaagttggaaa 736
              |||||||||||||||||||||||
Sbjct: 161608 gtgatgatttaagaagttggaaa 161586
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>dbj|AK062366.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-H10, full
           insert sequence
          Length = 691

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                       
Query: 282 ccaaagatcgcatcagcctttcttagtgtatcctctctggtctgcttgtgtgcattcagt 341
           ||||||||| | ||||||||  | || ||||||||||| |  ||||| || ||||| |||
Sbjct: 338 ccaaagatctcttcagccttcttgagagtatcctctcttgattgcttatgagcattgagt 279

                                  
Query: 342 tccttcacgttggctaggaatgc 364
           ||||| | |||||||| ||||||
Sbjct: 278 tccttgatgttggctaagaatgc 256
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>gb|AC007861.5| Homo sapiens chromosome 16 clone RP11-189E14, complete sequence
          Length = 175861

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 131    ttaaatacaccaaatacaaaat 152
              ||||||||||||||||||||||
Sbjct: 114669 ttaaatacaccaaatacaaaat 114690
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>gb|AC023725.5| Drosophila melanogaster X BAC RP98-9I10 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 165928

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 73     agtttttaaaaactatatttcc 94
              ||||||||||||||||||||||
Sbjct: 127908 agtttttaaaaactatatttcc 127887
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>gb|AC105352.2| Drosophila melanogaster X BAC RP98-45O17 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 172784

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 73     agtttttaaaaactatatttcc 94
              ||||||||||||||||||||||
Sbjct: 162918 agtttttaaaaactatatttcc 162897
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>gb|DQ404154.1| Tetrahymena thermophila dynein heavy chain 23 gene, partial sequence
          Length = 3227

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 189  gttaatcatggaaagatttata 210
            ||||||||||||||||||||||
Sbjct: 2544 gttaatcatggaaagatttata 2565
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>gb|AC107403.6| Drosophila melanogaster X BAC RP98-21M21 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 181831

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 73     agtttttaaaaactatatttcc 94
              ||||||||||||||||||||||
Sbjct: 140949 agtttttaaaaactatatttcc 140970
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>gb|AC007614.7| Homo sapiens chromosome 16 clone RP11-491F9, complete sequence
          Length = 192347

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 131  ttaaatacaccaaatacaaaat 152
            ||||||||||||||||||||||
Sbjct: 5741 ttaaatacaccaaatacaaaat 5762
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>gb|AE003429.4| Drosophila melanogaster chromosome X, section 13 of 74 of the complete
              sequence
          Length = 326403

 Score = 44.1 bits (22), Expect = 0.66
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 73     agtttttaaaaactatatttcc 94
              ||||||||||||||||||||||
Sbjct: 301503 agtttttaaaaactatatttcc 301524
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>emb|CR937029.1| M.truncatula DNA sequence from clone MTH2-105B15 on chromosome 3,
             complete sequence
          Length = 112155

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 147   caaaatatattaatcacaaat 167
             |||||||||||||||||||||
Sbjct: 17454 caaaatatattaatcacaaat 17474
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>gb|AC008467.7| Homo sapiens chromosome 5 clone CTC-364D2, complete sequence
          Length = 106729

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 142   aaatacaaaatatattaatca 162
             |||||||||||||||||||||
Sbjct: 88937 aaatacaaaatatattaatca 88917
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>gb|AC093423.2| Homo sapiens chromosome 1 clone RP11-413E1, complete sequence
          Length = 185182

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 149   aaatatattaatcacaaatgc 169
             |||||||||||||||||||||
Sbjct: 75051 aaatatattaatcacaaatgc 75031
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>gb|AC174443.3| Mus musculus BAC clone RP24-298O17 from chromosome y, complete sequence
          Length = 164632

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 703   ttcaaacaactgtgatgattt 723
             |||||||||||||||||||||
Sbjct: 99421 ttcaaacaactgtgatgattt 99441
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>gb|AC175830.2| Mus musculus BAC clone RP24-74O10 from chromosome y, complete sequence
          Length = 206082

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 703   ttcaaacaactgtgatgattt 723
             |||||||||||||||||||||
Sbjct: 50278 ttcaaacaactgtgatgattt 50298
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>emb|CR378661.1| M.truncatula DNA sequence from clone XX-10B15, complete sequence
          Length = 112155

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 147   caaaatatattaatcacaaat 167
             |||||||||||||||||||||
Sbjct: 17454 caaaatatattaatcacaaat 17474
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>gb|AC171684.1| Mus musculus BAC clone RP23-69D21 from chromosome 8, complete sequence
          Length = 255017

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 131    ttaaatacaccaaatacaaaa 151
              |||||||||||||||||||||
Sbjct: 202644 ttaaatacaccaaatacaaaa 202664


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,449,051
Number of Sequences: 3902068
Number of extensions: 7449051
Number of successful extensions: 151172
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 150982
Number of HSP's gapped (non-prelim): 186
length of query: 751
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 728
effective length of database: 17,143,297,704
effective search space: 12480320728512
effective search space used: 12480320728512
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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