ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasde22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome... 216 5e-53
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 216 5e-53
3dbj|AK100677.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 5e-53
4dbj|AK065369.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 5e-53
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 216 5e-53
6ref|NM_122248.2| Arabidopsis thaliana unknown protein AT5G23410 ... 92 2e-15
7dbj|AB018110.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 92 2e-15
8dbj|AB007647.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 84 5e-13
9dbj|AK117315.1| Arabidopsis thaliana mRNA for unknown protein, c... 84 5e-13
10ref|NM_105475.3| Arabidopsis thaliana FKF1 (FLAVIN-BINDING KELCH... 76 1e-10
11gb|AY113029.1| Arabidopsis thaliana At1g68050/T23K23_10 mRNA, co... 76 1e-10
12gb|AY064999.1| Arabidopsis thaliana At1g68050/T23K23_10 mRNA, co... 76 1e-10
13gb|AC012563.7|AC012563 Arabidopsis thaliana chromosome 1 BAC T23... 76 1e-10
14emb|BX815970.1|CNS0AEMF Arabidopsis thaliana Full-length cDNA Co... 76 1e-10
15gb|AF252296.1|AF252296 Arabidopsis thaliana Adagio 3 (ADO3) mRNA... 68 3e-08
16gb|AF216523.2|AF216523 Arabidopsis thaliana FKF1 mRNA, complete cds 68 3e-08
17dbj|AP004911.1| Lotus japonicus genomic DNA, chromosome 4, clone... 56 1e-04
18gb|AY371291.1| Mesembryanthemum crystallinum FKF1 (FKF1) mRNA, c... 54 4e-04
19gb|U10429.1|TGU10429 Toxoplasma gondii RH88 actin (ACT1) gene, c... 42 1.6
20emb|AJ538745.1|NTA538745 Nicotiana tabacum cDNA-AFLP-fragment BC... 42 1.6
21emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 42 1.6
22gb|DQ192649.1| Laminaria japonica actin mRNA, complete cds 42 1.6
23gb|DQ272502.1| Laminaria japonica actin gene, complete cds 42 1.6
24gb|AY711249.1| Uncultured bacterium clone SIMO-1883 16S ribosoma... 40 6.5
25gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, c... 40 6.5
26ref|XM_842586.1| Leishmania major strain Friedlin hypothetical p... 40 6.5
27emb|BX021609.1|CNS08OU5 Single read from an extremity of a full-... 40 6.5
28gb|AC106881.9| Homo sapiens BAC clone RP11-710C12 from 4, comple... 40 6.5
29gb|AC008883.6| Homo sapiens chromosome 5 clone CTD-2215E18, comp... 40 6.5
30gb|AC010460.7| Homo sapiens chromosome 5 clone CTD-2272G21, comp... 40 6.5
31ref|XM_318537.2| Anopheles gambiae str. PEST ENSANGP00000019642 ... 40 6.5
32emb|BX511172.6| Zebrafish DNA sequence from clone DKEY-13K23 in ... 40 6.5 
>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0005H02, complete sequence
          Length = 144882

 Score =  216 bits (109), Expect = 5e-53
 Identities = 327/400 (81%)
 Strand = Plus / Plus

                                                                         
Query: 79    catcttcgtcgggcctgcttgcgaggcagagctcgtggagctcattcaggatccactcct 138
             ||||||||||||||||||| |||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 53167 catcttcgtcgggcctgctcgcgaggcacagctcatggagctcattgagaatccactcct 53226

                                                                         
Query: 139   ctccgctgtgtccaccaagaaccaagaccctagtgccaccaaccacgcaggtgctgtgtc 198
             | ||  |||| ||||| || || |  ||||| ||||| ||||||||||| ||||| || |
Sbjct: 53227 ccccagtgtggccacccaggacaagaaccctggtgccgccaaccacgcatgtgctatgac 53286

                                                                         
Query: 199   cccaagcgaacttgggtggctgccccgggacgttcaggattctccatgtcggtttttcct 258
             |||| ||||||||||||||||| || ||||||||||  || ||||||||||| || ||||
Sbjct: 53287 cccaggcgaacttgggtggctggccagggacgttcaaaatcctccatgtcggcttctcct 53346

                                                                         
Query: 259   cagccggatcaagcaagaagagctcancgggtgagtgcagcccagcgattgagccgccaa 318
             | || || || || | ||| ||||    ||| ||||||||||||||||| ||||| || |
Sbjct: 53347 ccgctgggtcgaggaggaacagctgtgagggcgagtgcagcccagcgatggagccaccga 53406

                                                                         
Query: 319   atatgatgatccttccacagggcaggctcacggtgacatgatcaagccttggtggtggac 378
             ||||||| |||| ||||||||| ||||| || | ||||||||| ||||| || |||||||
Sbjct: 53407 atatgattatccgtccacaggggaggctgaccgcgacatgatcgagcctcggaggtggac 53466

                                                                         
Query: 379   aaccgcttggaaacacagttgttgccaactgcctccattgtggattctcttcaccaacat 438
                 ||| || ||| | ||||| ||||  ||||||||||||||  | ||||||||| | |
Sbjct: 53467 cgatgctcgggaacccggttgtcgccagttgcctccattgtgggctgtcttcaccagcgt 53526

                                                     
Query: 439   ccattatgtaggcatcactggagcgcagtcggagcgagcc 478
             ||||  |||||||||||| |||||| || ||||| |||||
Sbjct: 53527 ccatagtgtaggcatcacaggagcgtagccggagagagcc 53566
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  216 bits (109), Expect = 5e-53
 Identities = 327/400 (81%)
 Strand = Plus / Plus

                                                                            
Query: 79       catcttcgtcgggcctgcttgcgaggcagagctcgtggagctcattcaggatccactcct 138
                ||||||||||||||||||| |||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 19478890 catcttcgtcgggcctgctcgcgaggcacagctcatggagctcattgagaatccactcct 19478949

                                                                            
Query: 139      ctccgctgtgtccaccaagaaccaagaccctagtgccaccaaccacgcaggtgctgtgtc 198
                | ||  |||| ||||| || || |  ||||| ||||| ||||||||||| ||||| || |
Sbjct: 19478950 ccccagtgtggccacccaggacaagaaccctggtgccgccaaccacgcatgtgctatgac 19479009

                                                                            
Query: 199      cccaagcgaacttgggtggctgccccgggacgttcaggattctccatgtcggtttttcct 258
                |||| ||||||||||||||||| || ||||||||||  || ||||||||||| || ||||
Sbjct: 19479010 cccaggcgaacttgggtggctggccagggacgttcaaaatcctccatgtcggcttctcct 19479069

                                                                            
Query: 259      cagccggatcaagcaagaagagctcancgggtgagtgcagcccagcgattgagccgccaa 318
                | || || || || | ||| ||||    ||| ||||||||||||||||| ||||| || |
Sbjct: 19479070 ccgctgggtcgaggaggaacagctgtgagggcgagtgcagcccagcgatggagccaccga 19479129

                                                                            
Query: 319      atatgatgatccttccacagggcaggctcacggtgacatgatcaagccttggtggtggac 378
                ||||||| |||| ||||||||| ||||| || | ||||||||| ||||| || |||||||
Sbjct: 19479130 atatgattatccgtccacaggggaggctgaccgcgacatgatcgagcctcggaggtggac 19479189

                                                                            
Query: 379      aaccgcttggaaacacagttgttgccaactgcctccattgtggattctcttcaccaacat 438
                    ||| || ||| | ||||| ||||  ||||||||||||||  | ||||||||| | |
Sbjct: 19479190 cgatgctcgggaacccggttgtcgccagttgcctccattgtgggctgtcttcaccagcgt 19479249

                                                        
Query: 439      ccattatgtaggcatcactggagcgcagtcggagcgagcc 478
                ||||  |||||||||||| |||||| || ||||| |||||
Sbjct: 19479250 ccatagtgtaggcatcacaggagcgtagccggagagagcc 19479289
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>dbj|AK100677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113D18, full
            insert sequence
          Length = 2190

 Score =  216 bits (109), Expect = 5e-53
 Identities = 327/400 (81%)
 Strand = Plus / Minus

                                                                        
Query: 79   catcttcgtcgggcctgcttgcgaggcagagctcgtggagctcattcaggatccactcct 138
            ||||||||||||||||||| |||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 1982 catcttcgtcgggcctgctcgcgaggcacagctcatggagctcattgagaatccactcct 1923

                                                                        
Query: 139  ctccgctgtgtccaccaagaaccaagaccctagtgccaccaaccacgcaggtgctgtgtc 198
            | ||  |||| ||||| || || |  ||||| ||||| ||||||||||| ||||| || |
Sbjct: 1922 ccccagtgtggccacccaggacaagaaccctggtgccgccaaccacgcatgtgctatgac 1863

                                                                        
Query: 199  cccaagcgaacttgggtggctgccccgggacgttcaggattctccatgtcggtttttcct 258
            |||| ||||||||||||||||| || ||||||||||  || ||||||||||| || ||||
Sbjct: 1862 cccaggcgaacttgggtggctggccagggacgttcaaaatcctccatgtcggcttctcct 1803

                                                                        
Query: 259  cagccggatcaagcaagaagagctcancgggtgagtgcagcccagcgattgagccgccaa 318
            | || || || || | ||| ||||    ||| ||||||||||||||||| ||||| || |
Sbjct: 1802 ccgctgggtcgaggaggaacagctgtgagggcgagtgcagcccagcgatggagccaccga 1743

                                                                        
Query: 319  atatgatgatccttccacagggcaggctcacggtgacatgatcaagccttggtggtggac 378
            ||||||| |||| ||||||||| ||||| || | ||||||||| ||||| || |||||||
Sbjct: 1742 atatgattatccgtccacaggggaggctgaccgcgacatgatcgagcctcggaggtggac 1683

                                                                        
Query: 379  aaccgcttggaaacacagttgttgccaactgcctccattgtggattctcttcaccaacat 438
                ||| || ||| | ||||| ||||  ||||||||||||||  | ||||||||| | |
Sbjct: 1682 cgatgctcgggaacccggttgtcgccagttgcctccattgtgggctgtcttcaccagcgt 1623

                                                    
Query: 439  ccattatgtaggcatcactggagcgcagtcggagcgagcc 478
            ||||  |||||||||||| |||||| || ||||| |||||
Sbjct: 1622 ccatagtgtaggcatcacaggagcgtagccggagagagcc 1583
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>dbj|AK065369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023A04, full
            insert sequence
          Length = 3839

 Score =  216 bits (109), Expect = 5e-53
 Identities = 327/400 (81%)
 Strand = Plus / Minus

                                                                        
Query: 79   catcttcgtcgggcctgcttgcgaggcagagctcgtggagctcattcaggatccactcct 138
            ||||||||||||||||||| |||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 3620 catcttcgtcgggcctgctcgcgaggcacagctcatggagctcattgagaatccactcct 3561

                                                                        
Query: 139  ctccgctgtgtccaccaagaaccaagaccctagtgccaccaaccacgcaggtgctgtgtc 198
            | ||  |||| ||||| || || |  ||||| ||||| ||||||||||| ||||| || |
Sbjct: 3560 ccccagtgtggccacccaggacaagaaccctggtgccgccaaccacgcatgtgctatgac 3501

                                                                        
Query: 199  cccaagcgaacttgggtggctgccccgggacgttcaggattctccatgtcggtttttcct 258
            |||| ||||||||||||||||| || ||||||||||  || ||||||||||| || ||||
Sbjct: 3500 cccaggcgaacttgggtggctggccagggacgttcaaaatcctccatgtcggcttctcct 3441

                                                                        
Query: 259  cagccggatcaagcaagaagagctcancgggtgagtgcagcccagcgattgagccgccaa 318
            | || || || || | ||| ||||    ||| ||||||||||||||||| ||||| || |
Sbjct: 3440 ccgctgggtcgaggaggaacagctgtgagggcgagtgcagcccagcgatggagccaccga 3381

                                                                        
Query: 319  atatgatgatccttccacagggcaggctcacggtgacatgatcaagccttggtggtggac 378
            ||||||| |||| ||||||||| ||||| || | ||||||||| ||||| || |||||||
Sbjct: 3380 atatgattatccgtccacaggggaggctgaccgcgacatgatcgagcctcggaggtggac 3321

                                                                        
Query: 379  aaccgcttggaaacacagttgttgccaactgcctccattgtggattctcttcaccaacat 438
                ||| || ||| | ||||| ||||  ||||||||||||||  | ||||||||| | |
Sbjct: 3320 cgatgctcgggaacccggttgtcgccagttgcctccattgtgggctgtcttcaccagcgt 3261

                                                    
Query: 439  ccattatgtaggcatcactggagcgcagtcggagcgagcc 478
            ||||  |||||||||||| |||||| || ||||| |||||
Sbjct: 3260 ccatagtgtaggcatcacaggagcgtagccggagagagcc 3221
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  216 bits (109), Expect = 5e-53
 Identities = 327/400 (81%)
 Strand = Plus / Plus

                                                                            
Query: 79       catcttcgtcgggcctgcttgcgaggcagagctcgtggagctcattcaggatccactcct 138
                ||||||||||||||||||| |||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 19638064 catcttcgtcgggcctgctcgcgaggcacagctcatggagctcattgagaatccactcct 19638123

                                                                            
Query: 139      ctccgctgtgtccaccaagaaccaagaccctagtgccaccaaccacgcaggtgctgtgtc 198
                | ||  |||| ||||| || || |  ||||| ||||| ||||||||||| ||||| || |
Sbjct: 19638124 ccccagtgtggccacccaggacaagaaccctggtgccgccaaccacgcatgtgctatgac 19638183

                                                                            
Query: 199      cccaagcgaacttgggtggctgccccgggacgttcaggattctccatgtcggtttttcct 258
                |||| ||||||||||||||||| || ||||||||||  || ||||||||||| || ||||
Sbjct: 19638184 cccaggcgaacttgggtggctggccagggacgttcaaaatcctccatgtcggcttctcct 19638243

                                                                            
Query: 259      cagccggatcaagcaagaagagctcancgggtgagtgcagcccagcgattgagccgccaa 318
                | || || || || | ||| ||||    ||| ||||||||||||||||| ||||| || |
Sbjct: 19638244 ccgctgggtcgaggaggaacagctgtgagggcgagtgcagcccagcgatggagccaccga 19638303

                                                                            
Query: 319      atatgatgatccttccacagggcaggctcacggtgacatgatcaagccttggtggtggac 378
                ||||||| |||| ||||||||| ||||| || | ||||||||| ||||| || |||||||
Sbjct: 19638304 atatgattatccgtccacaggggaggctgaccgcgacatgatcgagcctcggaggtggac 19638363

                                                                            
Query: 379      aaccgcttggaaacacagttgttgccaactgcctccattgtggattctcttcaccaacat 438
                    ||| || ||| | ||||| ||||  ||||||||||||||  | ||||||||| | |
Sbjct: 19638364 cgatgctcgggaacccggttgtcgccagttgcctccattgtgggctgtcttcaccagcgt 19638423

                                                        
Query: 439      ccattatgtaggcatcactggagcgcagtcggagcgagcc 478
                ||||  |||||||||||| |||||| || ||||| |||||
Sbjct: 19638424 ccatagtgtaggcatcacaggagcgtagccggagagagcc 19638463
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>ref|NM_122248.2| Arabidopsis thaliana unknown protein AT5G23410 mRNA, complete cds
          Length = 458

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 112/134 (83%)
 Strand = Plus / Minus

                                                                       
Query: 120 tcattcaggatccactcctctccgctgtgtccaccaagaaccaagaccctagtgccacca 179
           ||||| || ||||| ||||| ||  |||| |||||||| ||||| || ||||| || |||
Sbjct: 209 tcattgagtatccattcctcaccattgtgaccaccaaggaccaatactctagttcctcca 150

                                                                       
Query: 180 accacgcaggtgctgtgtccccaagcgaacttgggtggctgccccgggacgttcaggatt 239
           || ||||| ||||| ||||||||||| ||||||||||| | ||| ||||| |||||||| 
Sbjct: 149 acaacgcatgtgctatgtccccaagctaacttgggtggtttccctgggacattcaggatc 90

                         
Query: 240 ctccatgtcggttt 253
           ||||||| ||||||
Sbjct: 89  ctccatgacggttt 76
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>dbj|AB018110.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19M13
          Length = 42563

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 112/134 (83%)
 Strand = Plus / Plus

                                                                        
Query: 120  tcattcaggatccactcctctccgctgtgtccaccaagaaccaagaccctagtgccacca 179
            ||||| || ||||| ||||| ||  |||| |||||||| ||||| || ||||| || |||
Sbjct: 7454 tcattgagtatccattcctcaccattgtgaccaccaaggaccaatactctagttcctcca 7513

                                                                        
Query: 180  accacgcaggtgctgtgtccccaagcgaacttgggtggctgccccgggacgttcaggatt 239
            || ||||| ||||| ||||||||||| ||||||||||| | ||| ||||| |||||||| 
Sbjct: 7514 acaacgcatgtgctatgtccccaagctaacttgggtggtttccctgggacattcaggatc 7573

                          
Query: 240  ctccatgtcggttt 253
            ||||||| ||||||
Sbjct: 7574 ctccatgacggttt 7587
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>dbj|AB007647.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJB21
          Length = 78369

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 111/134 (82%)
 Strand = Plus / Minus

                                                                         
Query: 120   tcattcaggatccactcctctccgctgtgtccaccaagaaccaagaccctagtgccacca 179
             ||||| || ||||| ||||| ||  |||| |||||||| ||||| || ||||| || |||
Sbjct: 41321 tcattgagtatccattcctcaccattgtgaccaccaaggaccaatactctagttcctcca 41262

                                                                         
Query: 180   accacgcaggtgctgtgtccccaagcgaacttgggtggctgccccgggacgttcaggatt 239
             || ||||| ||||| ||||||||||| ||||||||||| | ||| ||||| || ||||| 
Sbjct: 41261 acaacgcatgtgctatgtccccaagctaacttgggtggtttccctgggacatttaggatc 41202

                           
Query: 240   ctccatgtcggttt 253
             ||||||| ||||||
Sbjct: 41201 ctccatgacggttt 41188
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>dbj|AK117315.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone:
           RAFL16-88-C20
          Length = 897

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 111/134 (82%)
 Strand = Plus / Minus

                                                                       
Query: 120 tcattcaggatccactcctctccgctgtgtccaccaagaaccaagaccctagtgccacca 179
           ||||| || ||||| ||||| ||  |||| |||||||| ||||| || ||||| || |||
Sbjct: 710 tcattgagtatccattcctcaccattgtgaccaccaaggaccaatactctagttcctcca 651

                                                                       
Query: 180 accacgcaggtgctgtgtccccaagcgaacttgggtggctgccccgggacgttcaggatt 239
           || ||||| ||||| ||||||||||| ||||||||||| | ||| ||||| || ||||| 
Sbjct: 650 acaacgcatgtgctatgtccccaagctaacttgggtggtttccctgggacatttaggatc 591

                         
Query: 240 ctccatgtcggttt 253
           ||||||| ||||||
Sbjct: 590 ctccatgacggttt 577
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>ref|NM_105475.3| Arabidopsis thaliana FKF1 (FLAVIN-BINDING KELCH DOMAIN F BOX
            PROTEIN); signal transducer/ ubiquitin-protein ligase
            AT1G68050 (FKF1) mRNA, complete cds
          Length = 2113

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 110/134 (82%)
 Strand = Plus / Minus

                                                                        
Query: 120  tcattcaggatccactcctctccgctgtgtccaccaagaaccaagaccctagtgccacca 179
            ||||| || ||||| ||||| ||  |||| |||||||| ||||| || ||||| || |||
Sbjct: 1875 tcattgagtatccattcctcaccagtgtgaccaccaaggaccaatactctagttcctcca 1816

                                                                        
Query: 180  accacgcaggtgctgtgtccccaagcgaacttgggtggctgccccgggacgttcaggatt 239
            || ||||| ||||| ||||||||||| ||||| || || | ||| ||||| |||||||| 
Sbjct: 1815 acaacgcatgtgctatgtccccaagctaacttaggcggtttcccggggacattcaggatc 1756

                          
Query: 240  ctccatgtcggttt 253
            ||||||| ||||||
Sbjct: 1755 ctccatgacggttt 1742
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>gb|AY113029.1| Arabidopsis thaliana At1g68050/T23K23_10 mRNA, complete cds
          Length = 1860

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 110/134 (82%)
 Strand = Plus / Minus

                                                                        
Query: 120  tcattcaggatccactcctctccgctgtgtccaccaagaaccaagaccctagtgccacca 179
            ||||| || ||||| ||||| ||  |||| |||||||| ||||| || ||||| || |||
Sbjct: 1814 tcattgagtatccattcctcaccagtgtgaccaccaaggaccaatactctagttcctcca 1755

                                                                        
Query: 180  accacgcaggtgctgtgtccccaagcgaacttgggtggctgccccgggacgttcaggatt 239
            || ||||| ||||| ||||||||||| ||||| || || | ||| ||||| |||||||| 
Sbjct: 1754 acaacgcatgtgctatgtccccaagctaacttaggcggtttcccggggacattcaggatc 1695

                          
Query: 240  ctccatgtcggttt 253
            ||||||| ||||||
Sbjct: 1694 ctccatgacggttt 1681
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>gb|AY064999.1| Arabidopsis thaliana At1g68050/T23K23_10 mRNA, complete cds
          Length = 2105

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 110/134 (82%)
 Strand = Plus / Minus

                                                                        
Query: 120  tcattcaggatccactcctctccgctgtgtccaccaagaaccaagaccctagtgccacca 179
            ||||| || ||||| ||||| ||  |||| |||||||| ||||| || ||||| || |||
Sbjct: 1876 tcattgagtatccattcctcaccagtgtgaccaccaaggaccaatactctagttcctcca 1817

                                                                        
Query: 180  accacgcaggtgctgtgtccccaagcgaacttgggtggctgccccgggacgttcaggatt 239
            || ||||| ||||| ||||||||||| ||||| || || | ||| ||||| |||||||| 
Sbjct: 1816 acaacgcatgtgctatgtccccaagctaacttaggcggtttcccggggacattcaggatc 1757

                          
Query: 240  ctccatgtcggttt 253
            ||||||| ||||||
Sbjct: 1756 ctccatgacggttt 1743
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>gb|AC012563.7|AC012563 Arabidopsis thaliana chromosome 1 BAC T23K23 genomic sequence, complete
             sequence
          Length = 101966

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 110/134 (82%)
 Strand = Plus / Plus

                                                                         
Query: 120   tcattcaggatccactcctctccgctgtgtccaccaagaaccaagaccctagtgccacca 179
             ||||| || ||||| ||||| ||  |||| |||||||| ||||| || ||||| || |||
Sbjct: 33739 tcattgagtatccattcctcaccagtgtgaccaccaaggaccaatactctagttcctcca 33798

                                                                         
Query: 180   accacgcaggtgctgtgtccccaagcgaacttgggtggctgccccgggacgttcaggatt 239
             || ||||| ||||| ||||||||||| ||||| || || | ||| ||||| |||||||| 
Sbjct: 33799 acaacgcatgtgctatgtccccaagctaacttaggcggtttcccggggacattcaggatc 33858

                           
Query: 240   ctccatgtcggttt 253
             ||||||| ||||||
Sbjct: 33859 ctccatgacggttt 33872
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>emb|BX815970.1|CNS0AEMF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH1ZH06 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2071

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 110/134 (82%)
 Strand = Plus / Minus

                                                                        
Query: 120  tcattcaggatccactcctctccgctgtgtccaccaagaaccaagaccctagtgccacca 179
            ||||| || ||||| ||||| ||  |||| |||||||| ||||| || ||||| || |||
Sbjct: 1839 tcattgagtatccattcctcaccagtgtgaccaccaaggaccaatactctagttcctcca 1780

                                                                        
Query: 180  accacgcaggtgctgtgtccccaagcgaacttgggtggctgccccgggacgttcaggatt 239
            || ||||| ||||| ||||||||||| ||||| || || | ||| ||||| |||||||| 
Sbjct: 1779 acaacgcatgtgctatgtccccaagctaacttaggcggtttcccggggacattcaggatc 1720

                          
Query: 240  ctccatgtcggttt 253
            ||||||| ||||||
Sbjct: 1719 ctccatgacggttt 1706
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>gb|AF252296.1|AF252296 Arabidopsis thaliana Adagio 3 (ADO3) mRNA, complete cds
          Length = 2066

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 109/134 (81%)
 Strand = Plus / Minus

                                                                        
Query: 120  tcattcaggatccactcctctccgctgtgtccaccaagaaccaagaccctagtgccacca 179
            ||||| || ||||| ||||| ||  |||| |||||||| ||||| || ||||| || |||
Sbjct: 1839 tcattgagtatccattcctcaccagtgtgaccaccaaggaccaatactctagttcctcca 1780

                                                                        
Query: 180  accacgcaggtgctgtgtccccaagcgaacttgggtggctgccccgggacgttcaggatt 239
            || ||||| ||| | ||||||||||| ||||| || || | ||| ||||| |||||||| 
Sbjct: 1779 acaacgcatgtgttatgtccccaagctaacttaggcggtttcccggggacattcaggatc 1720

                          
Query: 240  ctccatgtcggttt 253
            ||||||| ||||||
Sbjct: 1719 ctccatgacggttt 1706
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>gb|AF216523.2|AF216523 Arabidopsis thaliana FKF1 mRNA, complete cds
          Length = 2066

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 109/134 (81%)
 Strand = Plus / Minus

                                                                        
Query: 120  tcattcaggatccactcctctccgctgtgtccaccaagaaccaagaccctagtgccacca 179
            ||||| || ||||| ||||| ||  |||| |||||||| ||||| || ||||| || |||
Sbjct: 1839 tcattgagtatccattcctcaccagtgtgaccaccaaggaccaatactctagttcctcca 1780

                                                                        
Query: 180  accacgcaggtgctgtgtccccaagcgaacttgggtggctgccccgggacgttcaggatt 239
            || ||||| ||| | ||||||||||| ||||| || || | ||| ||||| |||||||| 
Sbjct: 1779 acaacgcatgtgttatgtccccaagctaacttaggcggtttcccggggacattcaggatc 1720

                          
Query: 240  ctccatgtcggttt 253
            ||||||| ||||||
Sbjct: 1719 ctccatgacggttt 1706
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>dbj|AP004911.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13O11, TM0069,
             complete sequence
          Length = 103659

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 150/191 (78%)
 Strand = Plus / Minus

                                                                         
Query: 159   accaagaccctagtgccaccaaccacgcaggtgctgtgtccccaagcgaacttgggtggc 218
             ||||| |||||||| || |||||||| || ||||| || |||||||| ||||| || || 
Sbjct: 54961 accaacaccctagtccctccaaccacacaagtgctatgaccccaagcaaacttaggaggt 54902

                                                                         
Query: 219   tgccccgggacgttcaggattctccatgtcggtttttcctcagccggatcaagcaagaag 278
             ||||| || || || ||||| |||||||  ||||| || ||||  || || | ||  || 
Sbjct: 54901 tgccctggaacattgaggatcctccatgatggtttctcttcagaagggtccaacagaaac 54842

                                                                         
Query: 279   agctcancgggtgagtgcagcccagcgattgagccgccaaatatgatgatccttccacag 338
             |||| |   |||||||| || ||||| || || || ||||||||||||||||| ||||| 
Sbjct: 54841 agctgagatggtgagtgaagaccagcaatggaccctccaaatatgatgatcctcccacaa 54782

                        
Query: 339   ggcaggctcac 349
             |||| ||||||
Sbjct: 54781 ggcatgctcac 54771
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>gb|AY371291.1| Mesembryanthemum crystallinum FKF1 (FKF1) mRNA, complete cds
          Length = 2189

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                        
Query: 174  ccaccaaccacgcaggtgctgtgtccccaagcgaacttgggtggctgccccgggacgttc 233
            |||||||||||||| || ||||| ||||| || ||||| |||||||| || || ||||| 
Sbjct: 1883 ccaccaaccacgcacgtactgtggccccacgcaaacttaggtggctgaccgggaacgtta 1824

                                               
Query: 234  aggattctccatgtcggtttttcctcagccggatc 268
            | ||| ||||| | |||||| ||||| | ||||||
Sbjct: 1823 atgatcctccaagacggtttctcctctgacggatc 1789



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                        
Query: 294  tgcagcccagcgattgagccgccaaatatgatgatccttccacagggcaggctcacggtg 353
            ||||| || |||||||| || ||||| || |||||||| || || |||| |||||| |  
Sbjct: 1763 tgcaggccggcgattgaaccaccaaagattatgatcctgccgcatggcatgctcacagct 1704

                          
Query: 354  acatgatcaagcct 367
            ||||||||||||||
Sbjct: 1703 acatgatcaagcct 1690
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>gb|U10429.1|TGU10429 Toxoplasma gondii RH88 actin (ACT1) gene, complete cds
          Length = 2586

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 361 caagccttggtggtggacaac 381
           |||||||||||||||||||||
Sbjct: 666 caagccttggtggtggacaac 686
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>emb|AJ538745.1|NTA538745 Nicotiana tabacum cDNA-AFLP-fragment BC4-M44-043
          Length = 183

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 159 accaagaccctagtgccaccaaccacgcaggtgctgtgtccccaagcgaactt 211
           ||||||||||| || || |||||||| || ||||| || |||||||| |||||
Sbjct: 86  accaagacccttgttcctccaaccacacatgtgctatgaccccaagcaaactt 34
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>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 361     caagccttggtggtggacaac 381
               |||||||||||||||||||||
Sbjct: 1039190 caagccttggtggtggacaac 1039210
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>gb|DQ192649.1| Laminaria japonica actin mRNA, complete cds
          Length = 1131

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 361 caagccttggtggtggacaac 381
           |||||||||||||||||||||
Sbjct: 19  caagccttggtggtggacaac 39
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>gb|DQ272502.1| Laminaria japonica actin gene, complete cds
          Length = 3487

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 361 caagccttggtggtggacaac 381
           |||||||||||||||||||||
Sbjct: 19  caagccttggtggtggacaac 39
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>gb|AY711249.1| Uncultured bacterium clone SIMO-1883 16S ribosomal RNA gene,
           partial sequence
          Length = 563

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 369 ggtggtggacaaccgcttggaaac 392
           ||||| ||||||||||||||||||
Sbjct: 61  ggtgggggacaaccgcttggaaac 84
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>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence
          Length = 1212674

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    tgcgaggcagagctcgtgga 117
             ||||||||||||||||||||
Sbjct: 68992 tgcgaggcagagctcgtgga 68973
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>ref|XM_842586.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0656)
            partial mRNA
          Length = 4731

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   tgcgaggcagagctcgtgga 117
            ||||||||||||||||||||
Sbjct: 2353 tgcgaggcagagctcgtgga 2372
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>emb|BX021609.1|CNS08OU5 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA32AB12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 754

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 295 gcagcccagcgattgagccg 314
           ||||||||||||||||||||
Sbjct: 432 gcagcccagcgattgagccg 413
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>gb|AC106881.9| Homo sapiens BAC clone RP11-710C12 from 4, complete sequence
          Length = 150889

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   catgtcggtttttcctcagc 262
             ||||||||||||||||||||
Sbjct: 85185 catgtcggtttttcctcagc 85204
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>gb|AC008883.6| Homo sapiens chromosome 5 clone CTD-2215E18, complete sequence
          Length = 127144

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 426   tcttcaccaacatccattat 445
             ||||||||||||||||||||
Sbjct: 25398 tcttcaccaacatccattat 25417
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>gb|AC010460.7| Homo sapiens chromosome 5 clone CTD-2272G21, complete sequence
          Length = 109067

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 423   ttctcttcaccaacatccat 442
             ||||||||||||||||||||
Sbjct: 28477 ttctcttcaccaacatccat 28458
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>ref|XM_318537.2| Anopheles gambiae str. PEST ENSANGP00000019642 (ENSANGG00000017153),
            partial mRNA
          Length = 1578

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 295  gcagcccagcgattgagccg 314
            ||||||||||||||||||||
Sbjct: 1123 gcagcccagcgattgagccg 1104
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>emb|BX511172.6| Zebrafish DNA sequence from clone DKEY-13K23 in linkage group 4,
            complete sequence
          Length = 249278

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 433  caacatccattatgtaggca 452
            ||||||||||||||||||||
Sbjct: 3553 caacatccattatgtaggca 3534


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,502,049
Number of Sequences: 3902068
Number of extensions: 3502049
Number of successful extensions: 55461
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55383
Number of HSP's gapped (non-prelim): 73
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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