>gb|AC145615.3| Homo sapiens BAC clone RP11-1217H2 from UL, complete sequence
          Length = 207889

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 36     gaaacatatatagagacatgaaaaagca 63
              ||||||||| ||||||||||||||||||
Sbjct: 108662 gaaacatatttagagacatgaaaaagca 108689

>gb|AC142384.2| Homo sapiens chromosome 16 clone RP11-293B20, complete sequence
          Length = 182907

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 36    gaaacatatatagagacatgaaaaagca 63
             ||||||||| ||||||||||||||||||
Sbjct: 26732 gaaacatatttagagacatgaaaaagca 26705

>gb|AC127536.5| Homo sapiens chromosome 15, clone RP11-1181H2, complete sequence
          Length = 168996

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 36    gaaacatatatagagacatgaaaaagca 63
             ||||||||| ||||||||||||||||||
Sbjct: 58007 gaaacatatttagagacatgaaaaagca 57980

>gb|AC141587.2| Homo sapiens chromosome 16 clone RP11-1046E19, complete sequence
          Length = 186890

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 36    gaaacatatatagagacatgaaaaagca 63
             ||||||||| ||||||||||||||||||
Sbjct: 14851 gaaacatatttagagacatgaaaaagca 14878

>gb|AC092342.3| Homo sapiens chromosome 16 clone RP11-264M14, complete sequence
          Length = 170324

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 36     gaaacatatatagagacatgaaaaagca 63
              ||||||||| ||||||||||||||||||
Sbjct: 105223 gaaacatatttagagacatgaaaaagca 105250

>gb|AC140890.2| Homo sapiens chromosome 16 clone RP11-188D24, complete sequence
          Length = 172153

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 36    gaaacatatatagagacatgaaaaagca 63
             ||||||||| ||||||||||||||||||
Sbjct: 59940 gaaacatatttagagacatgaaaaagca 59967

>gb|AC136428.3| Homo sapiens chromosome 16 clone RP11-104C4, complete sequence
          Length = 193708

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 36    gaaacatatatagagacatgaaaaagca 63
             ||||||||| ||||||||||||||||||
Sbjct: 25450 gaaacatatttagagacatgaaaaagca 25477

>gb|AC136877.2| Homo sapiens chromosome 16 clone RP11-1258I11, complete sequence
          Length = 180454

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 36     gaaacatatatagagacatgaaaaagca 63
              ||||||||| ||||||||||||||||||
Sbjct: 113436 gaaacatatttagagacatgaaaaagca 113463

>emb|BX293997.14| Zebrafish DNA sequence from clone DKEY-15L7 in linkage group 6,
             complete sequence
          Length = 233655

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 253   ggccacagtcctgccctgcaccttgg 278
             |||||||||||||| |||||||||||
Sbjct: 65802 ggccacagtcctgcactgcaccttgg 65777

>emb|BX470189.5| Zebrafish DNA sequence from clone DKEY-195M1 in linkage group 5, complete
              sequence
          Length = 183070

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 253    ggccacagtcctgccctgcaccttgg 278
              |||||||||||||| |||||||||||
Sbjct: 169756 ggccacagtcctgcactgcaccttgg 169781

>emb|BX072568.5| Zebrafish DNA sequence from clone DKEY-238I7 in linkage group 6,
             complete sequence
          Length = 148322

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 253   ggccacagtcctgccctgcaccttgg 278
             |||||||||||||| |||||||||||
Sbjct: 78704 ggccacagtcctgcactgcaccttgg 78729

>ref|NM_190923.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 198

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 287 gccatcatcaagagcaggcagacctgcac 315
           ||||||| || ||||||||||||||||||
Sbjct: 74  gccatcaccacgagcaggcagacctgcac 46

>gb|AF352564.2| Pseudorabies virus immediate-early protein IE180 gene, complete cds
          Length = 6281

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 353  gccatggtctcgatcggttct 373
            |||||||||||||||||||||
Sbjct: 1299 gccatggtctcgatcggttct 1279

>gb|AF218842.1|AF218842 Pseudorabies virus IE180 (IE180) gene, partial cds
          Length = 560

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 353 gccatggtctcgatcggttct 373
           |||||||||||||||||||||
Sbjct: 262 gccatggtctcgatcggttct 242

>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 177    cggcggcggcgagcggggcttccg 200
              ||||||||||||||| ||||||||
Sbjct: 704516 cggcggcggcgagcgcggcttccg 704493

>gb|AC124489.2| Mus musculus BAC clone RP23-453H5 from chromosome 14, complete sequence
          Length = 167067

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     acatatatagagacatgaaa 58
              ||||||||||||||||||||
Sbjct: 147096 acatatatagagacatgaaa 147077

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 199     cgccgtcaggcgctcgcagc 218
               ||||||||||||||||||||
Sbjct: 4727389 cgccgtcaggcgctcgcagc 4727370

>emb|AL022344.3|HSY214H10 Human DNA sequence from clone XX-Y214H10 on chromosome 10 Contains a
              vomeronasal receptor (V1R) pseudogene, a cubilin (intrinsic
              factor-cobalamin receptor) (CUBN) pseudogene, gene
              KIAA0187, two novel genes, the gene for a novel protein
              similar to Ras suppressor protein 1 (RSU1) and four CpG
              islands, complete sequence
          Length = 197864

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 36     gaaacatatatagagacatgaaaaagca 63
              ||||||||| |||||| |||||||||||
Sbjct: 190832 gaaacatatttagagaaatgaaaaagca 190805

>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16
          Length = 349315

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    acggcggcggcgagcggggc 195
              ||||||||||||||||||||
Sbjct: 231520 acggcggcggcgagcggggc 231501

>gb|AC182397.3| Pan troglodytes BAC clone CH251-345O12 from chromosome 16, complete
             sequence
          Length = 158303

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 36    gaaacatatatagagacatgaaaaagca 63
             ||||||||| |||||| |||||||||||
Sbjct: 54740 gaaacatatttagagaaatgaaaaagca 54767

>gb|AC108517.3| Homo sapiens BAC clone RP11-622J8 from 4, complete sequence
          Length = 128233

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 36     gaaacatatatagagacatgaaaaagca 63
              ||||||| | ||||||||||||||||||
Sbjct: 111647 gaaacatttttagagacatgaaaaagca 111620

>gb|AC009704.8| Homo sapiens chromosome 18, clone RP11-231E4, complete sequence
          Length = 178691

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   ggacacatttctagggagga 141
             ||||||||||||||||||||
Sbjct: 50931 ggacacatttctagggagga 50950

>gb|AC126335.16| Homo sapiens chromosome 15, clone RP11-854K16, complete sequence
          Length = 178738

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 36     gaaacatatatagagacatgaaaaagca 63
              ||||||||| |||||| |||||||||||
Sbjct: 163605 gaaacatatttagagaaatgaaaaagca 163578

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 287      gccatcatcaagagcaggcagacctgca 314
                ||||||| || |||||||||||||||||
Sbjct: 33870187 gccatcaccacgagcaggcagacctgca 33870214

>gb|AC126603.9| Homo sapiens chromosome 15, clone RP11-492D6, complete sequence
          Length = 189363

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 36    gaaacatatatagagacatgaaaaagca 63
             ||||||||| |||||| |||||||||||
Sbjct: 46868 gaaacatatttagagaaatgaaaaagca 46841

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 205     caggcgctcgcagcactcgg 224
               ||||||||||||||||||||
Sbjct: 1760989 caggcgctcgcagcactcgg 1760970

>dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0691E06
          Length = 166497

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 287    gccatcatcaagagcaggcagacctgca 314
              ||||||| || |||||||||||||||||
Sbjct: 109234 gccatcaccacgagcaggcagacctgca 109261

>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0003D09
          Length = 161970

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 287  gccatcatcaagagcaggcagacctgca 314
            ||||||| || |||||||||||||||||
Sbjct: 1630 gccatcaccacgagcaggcagacctgca 1657

>emb|BX897734.11| Zebrafish DNA sequence from clone CH211-194J14, complete sequence
          Length = 151729

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     gaatcaaaagttctgaaaca 41
              ||||||||||||||||||||
Sbjct: 112158 gaatcaaaagttctgaaaca 112139

>gb|AC155172.4| Mus musculus BAC clone RP23-36N9 from chromosome 14, complete sequence
          Length = 255753

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     acatatatagagacatgaaa 58
              ||||||||||||||||||||
Sbjct: 201045 acatatatagagacatgaaa 201064


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,245,748
Number of Sequences: 3902068
Number of extensions: 4245748
Number of successful extensions: 85986
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85719
Number of HSP's gapped (non-prelim): 267
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)