Clone Name | rbasdd20 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TPP1_SCHPO (P78875) Trehalose-phosphatase (EC 3.1.3.12) (Trehalo... | 49 | 1e-05 | 2 | TPS2_YEAST (P31688) Trehalose-phosphatase (EC 3.1.3.12) (Trehalo... | 39 | 0.015 | 3 | TPSY_SCHPO (Q9UUI7) Putative alpha,alpha-trehalose-phosphate syn... | 37 | 0.072 | 4 | TPP_ENCCU (Q8SSL0) Probable trehalose-phosphatase (EC 3.1.3.12) ... | 33 | 0.80 | 5 | VAV3_HUMAN (Q9UKW4) Protein vav-3 | 32 | 1.8 | 6 | VAV3_MOUSE (Q9R0C8) Protein vav-3 | 32 | 2.3 | 7 | S35B3_DROME (Q9VVD9) Solute carrier family 35 member B3 homolog | 31 | 3.0 |
---|
>TPP1_SCHPO (P78875) Trehalose-phosphatase (EC 3.1.3.12) (Trehalose 6-phosphate| phosphatase) (TPP) Length = 817 Score = 48.9 bits (115), Expect = 1e-05 Identities = 31/89 (34%), Positives = 56/89 (62%), Gaps = 2/89 (2%) Frame = -1 Query: 677 SVSKGFVAEKILSMLTENKRQADFVLCIGDDRSDEDMFEGIADIMRRSIVDPQTSLYACT 498 S++KG + ++ILS E+ + F+ C GDDR+DEDMF + + + ++ +TS +A T Sbjct: 731 SINKGGIVKQILSSYPEDSLPS-FIFCAGDDRTDEDMFR---SLHKNTRINKETS-FAVT 785 Query: 497 VG--QKPSKAKYYLDDTNDVLNMLEALAD 417 +G +K S A + + D +V+++L LA+ Sbjct: 786 IGSDKKLSIADWCIADPANVIDILADLAN 814
>TPS2_YEAST (P31688) Trehalose-phosphatase (EC 3.1.3.12) (Trehalose 6-phosphate| phosphatase) (TPP) (Trehalose synthase complex catalytic subunit TPS2) Length = 896 Score = 38.9 bits (89), Expect = 0.015 Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 10/73 (13%) Frame = -1 Query: 611 DFVLCIGDDRSDEDMFEGIADI---MRRSIVDPQT-----SLYACTVG--QKPSKAKYYL 462 DFVLC+GDD +DEDMF + I + D + Y TVG K + AK +L Sbjct: 774 DFVLCLGDDFTDEDMFRQLNTIETCWKEKYPDQKNQWGNYGFYPVTVGSASKKTVAKAHL 833 Query: 461 DDTNDVLNMLEAL 423 D VL L L Sbjct: 834 TDPQQVLETLGLL 846
>TPSY_SCHPO (Q9UUI7) Putative alpha,alpha-trehalose-phosphate synthase| [UDP-forming] subunit 100 kDa subunit (EC 2.4.1.15) (Trehalose-6-phosphate synthase) (UDP-glucose-glucosephosphate glucosyltransferase) Length = 891 Score = 36.6 bits (83), Expect = 0.072 Identities = 22/85 (25%), Positives = 41/85 (48%) Frame = -1 Query: 677 SVSKGFVAEKILSMLTENKRQADFVLCIGDDRSDEDMFEGIADIMRRSIVDPQTSLYACT 498 ++SK A I++ L +N + D +L G++R+DE +F + S + + Sbjct: 813 TISKATAANYIMTHLIKNPEELDLILVAGNNRTDESVFAWAN--------KSKVSSFTVS 864 Query: 497 VGQKPSKAKYYLDDTNDVLNMLEAL 423 +G ++AK Y D N+L +L Sbjct: 865 MGVGNTEAKAYTDGIPSFFNVLNSL 889
>TPP_ENCCU (Q8SSL0) Probable trehalose-phosphatase (EC 3.1.3.12) (Trehalose| 6-phosphate phosphatase) (TPP) Length = 718 Score = 33.1 bits (74), Expect = 0.80 Identities = 22/69 (31%), Positives = 32/69 (46%) Frame = -1 Query: 623 KRQADFVLCIGDDRSDEDMFEGIADIMRRSIVDPQTSLYACTVGQKPSKAKYYLDDTNDV 444 K + FVLC GDD +DEDMF D+ + Y VG + + A Y + D + Sbjct: 663 KIEEGFVLCAGDDVADEDMF----DVCKG---------YTIKVGDQSTSAAYRVKDPENF 709 Query: 443 LNMLEALAD 417 +L L + Sbjct: 710 RMLLGRLLE 718
>VAV3_HUMAN (Q9UKW4) Protein vav-3| Length = 847 Score = 32.0 bits (71), Expect = 1.8 Identities = 10/31 (32%), Positives = 22/31 (70%) Frame = -1 Query: 581 SDEDMFEGIADIMRRSIVDPQTSLYACTVGQ 489 +DED+++G+ D++ ++V+ + LY C G+ Sbjct: 136 NDEDIYKGLPDLIDETLVEDEEDLYDCVYGE 166
>VAV3_MOUSE (Q9R0C8) Protein vav-3| Length = 847 Score = 31.6 bits (70), Expect = 2.3 Identities = 16/59 (27%), Positives = 30/59 (50%) Frame = -1 Query: 581 SDEDMFEGIADIMRRSIVDPQTSLYACTVGQKPSKAKYYLDDTNDVLNMLEALADASEE 405 +DED+++G+ D++ + V+ + LY C G+ Y D++ EA S+E Sbjct: 136 NDEDIYKGLPDLIDETRVEDEEDLYDCVYGEDEGGEVY-----EDLMKAEEAQQPKSQE 189
>S35B3_DROME (Q9VVD9) Solute carrier family 35 member B3 homolog| Length = 396 Score = 31.2 bits (69), Expect = 3.0 Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 3/107 (2%) Frame = -3 Query: 441 EHARGTCRCIRGGWFT---RRIGDTFSVGGGMMKSWMQEMSKSISQ*CIATSNLQSKLKP 271 + A TC CI WFT ++ F++ G M S +I N+Q K Sbjct: 192 DFAAATCMCIGLAWFTLADSQMTPNFNLLGVAMISGALLCDAAIG-------NVQEKAMR 244 Query: 270 SSASWSAALVIYR*SDQCQ*PSVGLVLVYFIVLPSRNFGVIFTFCLD 130 + S+ +V Y +G V ++ I+L + NF F FCL+ Sbjct: 245 EFKAPSSEVVFYS-------YGLGFVYLFVIMLVTGNFFSGFAFCLE 284 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,390,947 Number of Sequences: 219361 Number of extensions: 1685086 Number of successful extensions: 3782 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3678 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3771 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)