ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasdd07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF429948.1| Oryza sativa putative fructokinase I mRNA, complete cds Length = 1135 Score = 611 bits (308), Expect = e-171 Identities = 491/552 (88%) Strand = Plus / Minus Query: 130 atctatgcattctccatcagctgcaagacctcaatttctgtgggcaatgaagggattgcc 189 ||||| ||| ||||||||| || ||||||||||| ||| ||||||| ||| ||||||||| Sbjct: 1035 atctaagcactctccatcaacttcaagacctcaacttcggtgggcagtgatgggattgcc 976 Query: 190 cctttccttgtggtggtgattgctccacacgcattggcaaatttaatcgcctcctcgagc 249 |||||| |||||| |||||||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 975 cctttctttgtggcggtgattgctccgcacgcattggcaaatttaatcgcttcctcaagc 916 Query: 250 ttttcctgatcttgcagtgatgatggatcctggacaatttttcggagcagagcaccaaca 309 || | ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 915 ttcttctgatcttgcaacgatgatggatcctggacaattcttcgcagcagagcaccaaca 856 Query: 310 aatgcatcaccagcacctgttgtgtcaacttgttgtattttgtacgatgggacaactcca 369 || |||||||| ||||||||||| |||||||| |||| |||||| ||||||||| |||| Sbjct: 855 aacgcatcacctgcacctgttgtatcaacttgctgtactttgtaggatgggacagctccg 796 Query: 370 cggaaatccctggcatagtacttgcatccttgacctccaagagtgaccaggaggagctta 429 ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| Sbjct: 795 cggaaatccctggcatagtacttgcatccttgatctccaagagtcacaaggaggagcttc 736 Query: 430 aaggtagggcgccacagcttcatgacaacatcatcctcaactgagtcgatgccggtcaaa 489 | |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 735 atggtagggcgccatagcttcatgacaacatcatcctctactgagtcaatgccggtcaag 676 Query: 490 aactcgacctcagactcactgaccttgacaatgtctgcctggtcccagatactcaagatc 549 ||||| | ||| ||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 675 aactcaagctcgacctcgctgaccttgacaatgtctgcctggtcccagatgctcaagatc 616 Query: 550 ttgatgcgagcctcctcacgggatgaccacaatgcctccctcgggttcggatcatatgag 609 ||| ||||||||||||||||||| | ||||||||||||||| | ||||| ||||| || Sbjct: 615 ttggtgcgagcctcctcacgggagggccacaatgcctccctgagattcgggtcataagat 556 Query: 610 agaagcgcgccggcctctttggcaatctccatggcacgcagatgtgccgaccggcaaggc 669 || ||||| || || ||||| ||||||||||||||||||| |||||| |||||||| ||| Sbjct: 555 agcagcgcaccagcttctttcgcaatctccatggcacgcaaatgtgctgaccggcagggc 496 Query: 670 tcagcaatcaag 681 ||||| |||||| Sbjct: 495 tcagctatcaag 484
>dbj|AK120887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029D05, full insert sequence Length = 1216 Score = 611 bits (308), Expect = e-171 Identities = 491/552 (88%) Strand = Plus / Minus Query: 130 atctatgcattctccatcagctgcaagacctcaatttctgtgggcaatgaagggattgcc 189 ||||| ||| ||||||||| || ||||||||||| ||| ||||||| ||| ||||||||| Sbjct: 840 atctaagcactctccatcaacttcaagacctcaacttcggtgggcagtgatgggattgcc 781 Query: 190 cctttccttgtggtggtgattgctccacacgcattggcaaatttaatcgcctcctcgagc 249 |||||| |||||| |||||||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 780 cctttctttgtggcggtgattgctccgcacgcattggcaaatttaatcgcttcctcaagc 721 Query: 250 ttttcctgatcttgcagtgatgatggatcctggacaatttttcggagcagagcaccaaca 309 || | ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 720 ttcttctgatcttgcaacgatgatggatcctggacaattcttcgcagcagagcaccaaca 661 Query: 310 aatgcatcaccagcacctgttgtgtcaacttgttgtattttgtacgatgggacaactcca 369 || |||||||| ||||||||||| |||||||| |||| |||||| ||||||||| |||| Sbjct: 660 aacgcatcacctgcacctgttgtatcaacttgctgtactttgtaggatgggacagctccg 601 Query: 370 cggaaatccctggcatagtacttgcatccttgacctccaagagtgaccaggaggagctta 429 ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| Sbjct: 600 cggaaatccctggcatagtacttgcatccttgatctccaagagtcacaaggaggagcttc 541 Query: 430 aaggtagggcgccacagcttcatgacaacatcatcctcaactgagtcgatgccggtcaaa 489 | |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 540 atggtagggcgccatagcttcatgacaacatcatcctctactgagtcaatgccggtcaag 481 Query: 490 aactcgacctcagactcactgaccttgacaatgtctgcctggtcccagatactcaagatc 549 ||||| | ||| ||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 480 aactcaagctcgacctcgctgaccttgacaatgtctgcctggtcccagatgctcaagatc 421 Query: 550 ttgatgcgagcctcctcacgggatgaccacaatgcctccctcgggttcggatcatatgag 609 ||| ||||||||||||||||||| | ||||||||||||||| | ||||| ||||| || Sbjct: 420 ttggtgcgagcctcctcacgggagggccacaatgcctccctgagattcgggtcataagat 361 Query: 610 agaagcgcgccggcctctttggcaatctccatggcacgcagatgtgccgaccggcaaggc 669 || ||||| || || ||||| ||||||||||||||||||| |||||| |||||||| ||| Sbjct: 360 agcagcgcaccagcttctttcgcaatctccatggcacgcaaatgtgctgaccggcagggc 301 Query: 670 tcagcaatcaag 681 ||||| |||||| Sbjct: 300 tcagctatcaag 289
>dbj|AK060500.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-F08, full insert sequence Length = 1380 Score = 611 bits (308), Expect = e-171 Identities = 491/552 (88%) Strand = Plus / Minus Query: 130 atctatgcattctccatcagctgcaagacctcaatttctgtgggcaatgaagggattgcc 189 ||||| ||| ||||||||| || ||||||||||| ||| ||||||| ||| ||||||||| Sbjct: 1196 atctaagcactctccatcaacttcaagacctcaacttcggtgggcagtgatgggattgcc 1137 Query: 190 cctttccttgtggtggtgattgctccacacgcattggcaaatttaatcgcctcctcgagc 249 |||||| |||||| |||||||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 1136 cctttctttgtggcggtgattgctccgcacgcattggcaaatttaatcgcttcctcaagc 1077 Query: 250 ttttcctgatcttgcagtgatgatggatcctggacaatttttcggagcagagcaccaaca 309 || | ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 1076 ttcttctgatcttgcaacgatgatggatcctggacaattcttcgcagcagagcaccaaca 1017 Query: 310 aatgcatcaccagcacctgttgtgtcaacttgttgtattttgtacgatgggacaactcca 369 || |||||||| ||||||||||| |||||||| |||| |||||| ||||||||| |||| Sbjct: 1016 aacgcatcacctgcacctgttgtatcaacttgctgtactttgtaggatgggacagctccg 957 Query: 370 cggaaatccctggcatagtacttgcatccttgacctccaagagtgaccaggaggagctta 429 ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| Sbjct: 956 cggaaatccctggcatagtacttgcatccttgatctccaagagtcacaaggaggagcttc 897 Query: 430 aaggtagggcgccacagcttcatgacaacatcatcctcaactgagtcgatgccggtcaaa 489 | |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 896 atggtagggcgccatagcttcatgacaacatcatcctctactgagtcaatgccggtcaag 837 Query: 490 aactcgacctcagactcactgaccttgacaatgtctgcctggtcccagatactcaagatc 549 ||||| | ||| ||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 836 aactcaagctcgacctcgctgaccttgacaatgtctgcctggtcccagatgctcaagatc 777 Query: 550 ttgatgcgagcctcctcacgggatgaccacaatgcctccctcgggttcggatcatatgag 609 ||| ||||||||||||||||||| | ||||||||||||||| | ||||| ||||| || Sbjct: 776 ttggtgcgagcctcctcacgggagggccacaatgcctccctgagattcgggtcataagat 717 Query: 610 agaagcgcgccggcctctttggcaatctccatggcacgcagatgtgccgaccggcaaggc 669 || ||||| || || ||||| ||||||||||||||||||| |||||| |||||||| ||| Sbjct: 716 agcagcgcaccagcttctttcgcaatctccatggcacgcaaatgtgctgaccggcagggc 657 Query: 670 tcagcaatcaag 681 ||||| |||||| Sbjct: 656 tcagctatcaag 645
>ref|NM_190249.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 972 Score = 607 bits (306), Expect = e-170 Identities = 483/542 (89%) Strand = Plus / Minus Query: 140 tctccatcagctgcaagacctcaatttctgtgggcaatgaagggattgcccctttccttg 199 ||||||||| || ||||||||||| ||| ||||||| ||| ||||||||||||||| ||| Sbjct: 964 tctccatcaacttcaagacctcaacttcggtgggcagtgatgggattgcccctttctttg 905 Query: 200 tggtggtgattgctccacacgcattggcaaatttaatcgcctcctcgagcttttcctgat 259 ||| |||||||||||| ||||||||||||||||||||||| ||||| ||||| | ||||| Sbjct: 904 tggcggtgattgctccgcacgcattggcaaatttaatcgcttcctcaagcttcttctgat 845 Query: 260 cttgcagtgatgatggatcctggacaatttttcggagcagagcaccaacaaatgcatcac 319 |||||| ||||||||||||||||||||| |||| ||||||||||||||||| ||||||| Sbjct: 844 cttgcaacgatgatggatcctggacaattcttcgcagcagagcaccaacaaacgcatcac 785 Query: 320 cagcacctgttgtgtcaacttgttgtattttgtacgatgggacaactccacggaaatccc 379 | ||||||||||| |||||||| |||| |||||| ||||||||| |||| |||||||||| Sbjct: 784 ctgcacctgttgtatcaacttgctgtactttgtaggatgggacagctccgcggaaatccc 725 Query: 380 tggcatagtacttgcatccttgacctccaagagtgaccaggaggagcttaaaggtagggc 439 ||||||||||||||||||||||| |||||||||| || ||||||||||| | |||||||| Sbjct: 724 tggcatagtacttgcatccttgatctccaagagtcacaaggaggagcttcatggtagggc 665 Query: 440 gccacagcttcatgacaacatcatcctcaactgagtcgatgccggtcaaaaactcgacct 499 |||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||| | || Sbjct: 664 gccatagcttcatgacaacatcatcctctactgagtcaatgccggtcaagaactcaagct 605 Query: 500 cagactcactgaccttgacaatgtctgcctggtcccagatactcaagatcttgatgcgag 559 | ||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 604 cgacctcgctgaccttgacaatgtctgcctggtcccagatgctcaagatcttggtgcgag 545 Query: 560 cctcctcacgggatgaccacaatgcctccctcgggttcggatcatatgagagaagcgcgc 619 ||||||||||||| | ||||||||||||||| | ||||| ||||| || || ||||| | Sbjct: 544 cctcctcacgggagggccacaatgcctccctgagattcgggtcataagatagcagcgcac 485 Query: 620 cggcctctttggcaatctccatggcacgcagatgtgccgaccggcaaggctcagcaatca 679 | || ||||| ||||||||||||||||||| |||||| |||||||| |||||||| |||| Sbjct: 484 cagcttctttcgcaatctccatggcacgcaaatgtgctgaccggcagggctcagctatca 425 Query: 680 ag 681 || Sbjct: 424 ag 423
>gb|AY197772.1| Zea mays fructokinase 1 (frk1) mRNA, complete cds Length = 1262 Score = 398 bits (201), Expect = e-108 Identities = 467/553 (84%), Gaps = 2/553 (0%) Strand = Plus / Minus Query: 130 atctatgcattctccatcagctgcaagacctcaatttctgtgggcaatgaagggattgcc 189 ||||| || ||||| || |||||||||||||| ||| ||||||| || ||||| ||| Sbjct: 992 atctaagccttctctattagctgcaagacctccgcttcggtgggcagcgacgggatcgcc 933 Query: 190 cctttccttgtggtggtgattgctccacacgcattggcaaatttaatcgcctcctcgagc 249 || ||| | ||||||||||| ||||| ||||| || || |||||||||| |||| | ||| Sbjct: 932 cccttcttcgtggtggtgatcgctccgcacgcgttagcgaatttaatcgactccacaagc 873 Query: 250 ttttcctgatcttgcagtgatgatggatcctggacaatttttcggagcagagcaccaaca 309 || | || |||||| || || |||||||| | || || || |||||||||||||||| Sbjct: 872 ttcttctcatcttgtagcgaggatggatctttaacgatcctttggagcagagcaccaacg 813 Query: 310 aatgcatcaccagcacctgttgtgtcaacttgttgtattttgtacgatgggacaactcca 369 || || ||||| || || ||||| ||||||||||||| |||| | || || ||| | ||| Sbjct: 812 aacgcgtcacctgcgccagttgtatcaacttgttgtactttgaaggaaggcacagcgcca 753 Query: 370 cggaaatccctggcatagtacttgcatccttgacctccaagagtgaccaggaggagctta 429 ||||||||||||||||||||||||| |||||| |||||||||| || ||||| ||||| Sbjct: 752 tggaaatccctggcatagtacttgcacccttgatctccaagagtcactaggagcagcttc 693 Query: 430 aaggtagggcgccacagcttcatgacaacatcatcctcaactgagtcgatgccggtcaaa 489 | |||||| ||||||||||||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 692 atggtaggccgccacagcttcatgacaacatcgtcctccaccgagtcgatgcctgtcaag 633 Query: 490 aactcgacctcagact-cactgaccttgacaatgtctgcctggtcccagatactcaagat 548 ||||||| ||| |||| | |||||||||||||||||||||||||||||||| |||||||| Sbjct: 632 aactcgagctc-gacttcgctgaccttgacaatgtctgcctggtcccagatgctcaagat 574 Query: 549 cttgatgcgagcctcctcacgggatgaccacaatgcctccctcgggttcggatcatatga 608 || | |||| |||||||||||||||| ||| | |||||||||| |||| || ||||| || Sbjct: 573 ctgggtgcgggcctcctcacgggatggccatagtgcctccctcaggtttgggtcataaga 514 Query: 609 gagaagcgcgccggcctctttggcaatctccatggcacgcagatgtgccgaccggcaagg 668 ||| || || || |||||||||||||||||||||||||| |||||||| | ||||||||| Sbjct: 513 gagcagtgcacctgcctctttggcaatctccatggcacggagatgtgctgtccggcaagg 454 Query: 669 ctcagcaatcaag 681 ||||||||||||| Sbjct: 453 ctcagcaatcaag 441
>gb|AY104222.1| Zea mays PCO070293 mRNA sequence Length = 1331 Score = 391 bits (197), Expect = e-105 Identities = 466/553 (84%), Gaps = 2/553 (0%) Strand = Plus / Minus Query: 130 atctatgcattctccatcagctgcaagacctcaatttctgtgggcaatgaagggattgcc 189 |||||||| ||||| || ||||||||||||||| |||| |||||||| || ||||| || Sbjct: 1080 atctatgccttctctattagctgcaagacctcagtttcagtgggcaaagacgggatcgca 1021 Query: 190 cctttccttgtggtggtgattgctccacacgcattggcaaatttaatcgcctcctcgagc 249 || ||| | |||| ||||||||||||||||||||| || |||||||| | ||| | ||| Sbjct: 1020 cccttcttcgtggcggtgattgctccacacgcattagcgaatttaatagactctacaagc 961 Query: 250 ttttcctgatcttgcagtgatgatggatcctggacaatttttcggagcagagcaccaaca 309 || | || ||||| || || |||||||| | || || |||||||||| ||||||||| Sbjct: 960 ttcttctcgtcttgtagcgaggatggatctttaacgatccttcggagcagcgcaccaaca 901 Query: 310 aatgcatcaccagcacctgttgtgtcaacttgttgtattttgtacgatgggacaactcca 369 || ||||| || || || || || || |||||||||| |||| | || |||||| ||||| Sbjct: 900 aacgcatcgcctgcgccagtcgtatcgacttgttgtactttgaaggaagggacagctcca 841 Query: 370 cggaaatccctggcatagtacttgcatccttgacctccaagagtgaccaggaggagctta 429 |||||||||||| ||||||||||||||||||| |||||||||| |||||||| ||||| Sbjct: 840 tggaaatccctggtatagtacttgcatccttgatctccaagagtcaccaggagcagcttc 781 Query: 430 aaggtagggcgccacagcttcatgacaacatcatcctcaactgagtcgatgccggtcaaa 489 | |||||| ||||||||||||||||||||||| ||||| ||||||| |||||| ||||| Sbjct: 780 atggtaggtcgccacagcttcatgacaacatcgtcctccactgagttgatgcctgtcaag 721 Query: 490 aactcgacctcagac-tcactgaccttgacaatgtctgcctggtcccagatactcaagat 548 ||||| | ||| ||| || ||||||||||| || ||||||||||||||||| |||||||| Sbjct: 720 aactcaagctc-gacttcgctgaccttgacgatatctgcctggtcccagatgctcaagat 662 Query: 549 cttgatgcgagcctcctcacgggatgaccacaatgcctccctcgggttcggatcatatga 608 || | |||| |||||||||||||||| ||| | |||||||||| |||| || || || || Sbjct: 661 ctgggtgcgggcctcctcacgggatggccaaagtgcctccctcaggtttgggtcgtaaga 602 Query: 609 gagaagcgcgccggcctctttggcaatctccatggcacgcagatgtgccgaccggcaagg 668 ||| || || || |||||||||||||| ||||||||||| |||||||| | ||||||||| Sbjct: 601 gagcagtgcaccagcctctttggcaatttccatggcacggagatgtgctgtccggcaagg 542 Query: 669 ctcagcaatcaag 681 ||||||||||||| Sbjct: 541 ctcagcaatcaag 529
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 335 bits (169), Expect = 1e-88 Identities = 271/305 (88%) Strand = Plus / Plus Query: 377 ccctggcatagtacttgcatccttgacctccaagagtgaccaggaggagcttaaaggtag 436 |||||||||||||||||||||||||| |||||||||| || ||||||||||| | ||||| Sbjct: 38879117 ccctggcatagtacttgcatccttgatctccaagagtcacaaggaggagcttcatggtag 38879176 Query: 437 ggcgccacagcttcatgacaacatcatcctcaactgagtcgatgccggtcaaaaactcga 496 ||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||| | Sbjct: 38879177 ggcgccatagcttcatgacaacatcatcctctactgagtcaatgccggtcaagaactcaa 38879236 Query: 497 cctcagactcactgaccttgacaatgtctgcctggtcccagatactcaagatcttgatgc 556 ||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 38879237 gctcgacctcgctgaccttgacaatgtctgcctggtcccagatgctcaagatcttggtgc 38879296 Query: 557 gagcctcctcacgggatgaccacaatgcctccctcgggttcggatcatatgagagaagcg 616 |||||||||||||||| | ||||||||||||||| | ||||| ||||| || || |||| Sbjct: 38879297 gagcctcctcacgggagggccacaatgcctccctgagattcgggtcataagatagcagcg 38879356 Query: 617 cgccggcctctttggcaatctccatggcacgcagatgtgccgaccggcaaggctcagcaa 676 | || || ||||| ||||||||||||||||||| |||||| |||||||| |||||||| | Sbjct: 38879357 caccagcttctttcgcaatctccatggcacgcaaatgtgctgaccggcagggctcagcta 38879416 Query: 677 tcaag 681 ||||| Sbjct: 38879417 tcaag 38879421 Score = 145 bits (73), Expect = 2e-31 Identities = 121/137 (88%) Strand = Plus / Plus Query: 130 atctatgcattctccatcagctgcaagacctcaatttctgtgggcaatgaagggattgcc 189 ||||| ||| ||||||||| || ||||||||||| ||| ||||||| ||| ||||||||| Sbjct: 38878595 atctaagcactctccatcaacttcaagacctcaacttcggtgggcagtgatgggattgcc 38878654 Query: 190 cctttccttgtggtggtgattgctccacacgcattggcaaatttaatcgcctcctcgagc 249 |||||| |||||| |||||||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 38878655 cctttctttgtggcggtgattgctccgcacgcattggcaaatttaatcgcttcctcaagc 38878714 Query: 250 ttttcctgatcttgcag 266 || | |||||| ||||| Sbjct: 38878715 ttcttctgatcctgcag 38878731 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 268 gatgatggatcctggacaatttttcggagcagagcaccaacaaatgcatcaccagcacct 327 ||||||||||||||||||||| |||| ||||||||||||||||| |||||||| |||||| Sbjct: 38878825 gatgatggatcctggacaattcttcgcagcagagcaccaacaaacgcatcacctgcacct 38878884 Query: 328 gttgtgtcaacttgttgtattttgtacgatgggacaactccacggaaatcc 378 ||||| |||||||| |||| |||||| ||||||||| |||| ||||||||| Sbjct: 38878885 gttgtatcaacttgctgtactttgtaggatgggacagctccgcggaaatcc 38878935
>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1078G07 Length = 199457 Score = 335 bits (169), Expect = 1e-88 Identities = 271/305 (88%) Strand = Plus / Plus Query: 377 ccctggcatagtacttgcatccttgacctccaagagtgaccaggaggagcttaaaggtag 436 |||||||||||||||||||||||||| |||||||||| || ||||||||||| | ||||| Sbjct: 151999 ccctggcatagtacttgcatccttgatctccaagagtcacaaggaggagcttcatggtag 152058 Query: 437 ggcgccacagcttcatgacaacatcatcctcaactgagtcgatgccggtcaaaaactcga 496 ||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||| | Sbjct: 152059 ggcgccatagcttcatgacaacatcatcctctactgagtcaatgccggtcaagaactcaa 152118 Query: 497 cctcagactcactgaccttgacaatgtctgcctggtcccagatactcaagatcttgatgc 556 ||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 152119 gctcgacctcgctgaccttgacaatgtctgcctggtcccagatgctcaagatcttggtgc 152178 Query: 557 gagcctcctcacgggatgaccacaatgcctccctcgggttcggatcatatgagagaagcg 616 |||||||||||||||| | ||||||||||||||| | ||||| ||||| || || |||| Sbjct: 152179 gagcctcctcacgggagggccacaatgcctccctgagattcgggtcataagatagcagcg 152238 Query: 617 cgccggcctctttggcaatctccatggcacgcagatgtgccgaccggcaaggctcagcaa 676 | || || ||||| ||||||||||||||||||| |||||| |||||||| |||||||| | Sbjct: 152239 caccagcttctttcgcaatctccatggcacgcaaatgtgctgaccggcagggctcagcta 152298 Query: 677 tcaag 681 ||||| Sbjct: 152299 tcaag 152303 Score = 145 bits (73), Expect = 2e-31 Identities = 121/137 (88%) Strand = Plus / Plus Query: 130 atctatgcattctccatcagctgcaagacctcaatttctgtgggcaatgaagggattgcc 189 ||||| ||| ||||||||| || ||||||||||| ||| ||||||| ||| ||||||||| Sbjct: 151477 atctaagcactctccatcaacttcaagacctcaacttcggtgggcagtgatgggattgcc 151536 Query: 190 cctttccttgtggtggtgattgctccacacgcattggcaaatttaatcgcctcctcgagc 249 |||||| |||||| |||||||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 151537 cctttctttgtggcggtgattgctccgcacgcattggcaaatttaatcgcttcctcaagc 151596 Query: 250 ttttcctgatcttgcag 266 || | |||||| ||||| Sbjct: 151597 ttcttctgatcctgcag 151613 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 268 gatgatggatcctggacaatttttcggagcagagcaccaacaaatgcatcaccagcacct 327 ||||||||||||||||||||| |||| ||||||||||||||||| |||||||| |||||| Sbjct: 151707 gatgatggatcctggacaattcttcgcagcagagcaccaacaaacgcatcacctgcacct 151766 Query: 328 gttgtgtcaacttgttgtattttgtacgatgggacaactccacggaaatcc 378 ||||| |||||||| |||| |||||| ||||||||| |||| ||||||||| Sbjct: 151767 gttgtatcaacttgctgtactttgtaggatgggacagctccgcggaaatcc 151817
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 335 bits (169), Expect = 1e-88 Identities = 271/305 (88%) Strand = Plus / Plus Query: 377 ccctggcatagtacttgcatccttgacctccaagagtgaccaggaggagcttaaaggtag 436 |||||||||||||||||||||||||| |||||||||| || ||||||||||| | ||||| Sbjct: 43903 ccctggcatagtacttgcatccttgatctccaagagtcacaaggaggagcttcatggtag 43962 Query: 437 ggcgccacagcttcatgacaacatcatcctcaactgagtcgatgccggtcaaaaactcga 496 ||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||| | Sbjct: 43963 ggcgccatagcttcatgacaacatcatcctctactgagtcaatgccggtcaagaactcaa 44022 Query: 497 cctcagactcactgaccttgacaatgtctgcctggtcccagatactcaagatcttgatgc 556 ||| ||| |||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 44023 gctcgacctcgctgaccttgacaatgtctgcctggtcccagatgctcaagatcttggtgc 44082 Query: 557 gagcctcctcacgggatgaccacaatgcctccctcgggttcggatcatatgagagaagcg 616 |||||||||||||||| | ||||||||||||||| | ||||| ||||| || || |||| Sbjct: 44083 gagcctcctcacgggagggccacaatgcctccctgagattcgggtcataagatagcagcg 44142 Query: 617 cgccggcctctttggcaatctccatggcacgcagatgtgccgaccggcaaggctcagcaa 676 | || || ||||| ||||||||||||||||||| |||||| |||||||| |||||||| | Sbjct: 44143 caccagcttctttcgcaatctccatggcacgcaaatgtgctgaccggcagggctcagcta 44202 Query: 677 tcaag 681 ||||| Sbjct: 44203 tcaag 44207 Score = 145 bits (73), Expect = 2e-31 Identities = 121/137 (88%) Strand = Plus / Plus Query: 130 atctatgcattctccatcagctgcaagacctcaatttctgtgggcaatgaagggattgcc 189 ||||| ||| ||||||||| || ||||||||||| ||| ||||||| ||| ||||||||| Sbjct: 43381 atctaagcactctccatcaacttcaagacctcaacttcggtgggcagtgatgggattgcc 43440 Query: 190 cctttccttgtggtggtgattgctccacacgcattggcaaatttaatcgcctcctcgagc 249 |||||| |||||| |||||||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 43441 cctttctttgtggcggtgattgctccgcacgcattggcaaatttaatcgcttcctcaagc 43500 Query: 250 ttttcctgatcttgcag 266 || | |||||| ||||| Sbjct: 43501 ttcttctgatcctgcag 43517 Score = 141 bits (71), Expect = 3e-30 Identities = 101/111 (90%) Strand = Plus / Plus Query: 268 gatgatggatcctggacaatttttcggagcagagcaccaacaaatgcatcaccagcacct 327 ||||||||||||||||||||| |||| ||||||||||||||||| |||||||| |||||| Sbjct: 43611 gatgatggatcctggacaattcttcgcagcagagcaccaacaaacgcatcacctgcacct 43670 Query: 328 gttgtgtcaacttgttgtattttgtacgatgggacaactccacggaaatcc 378 ||||| |||||||| |||| |||||| ||||||||| |||| ||||||||| Sbjct: 43671 gttgtatcaacttgctgtactttgtaggatgggacagctccgcggaaatcc 43721
>ref|NM_105314.3| Arabidopsis thaliana kinase/ ribokinase AT1G66430 mRNA, complete cds Length = 1481 Score = 61.9 bits (31), Expect = 3e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 305 caacaaatgcatcaccagcacctgttgtgtc 335 ||||||||||||||||||||||||||||||| Sbjct: 1080 caacaaatgcatcaccagcacctgttgtgtc 1050
>gb|BT000889.1| Arabidopsis thaliana clone C105365 putative fructokinase (At1g66430) mRNA, complete cds Length = 763 Score = 61.9 bits (31), Expect = 3e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 305 caacaaatgcatcaccagcacctgttgtgtc 335 ||||||||||||||||||||||||||||||| Sbjct: 553 caacaaatgcatcaccagcacctgttgtgtc 523
>gb|AF370329.1| Arabidopsis thaliana putative fructokinase (At1g66430) mRNA, partial cds Length = 913 Score = 61.9 bits (31), Expect = 3e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 305 caacaaatgcatcaccagcacctgttgtgtc 335 ||||||||||||||||||||||||||||||| Sbjct: 505 caacaaatgcatcaccagcacctgttgtgtc 475
>emb|BX818723.1|CNS0AE7C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL94ZH09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 732 Score = 61.9 bits (31), Expect = 3e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 305 caacaaatgcatcaccagcacctgttgtgtc 335 ||||||||||||||||||||||||||||||| Sbjct: 333 caacaaatgcatcaccagcacctgttgtgtc 303
>emb|BX816698.1|CNS0ABXO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH63ZG03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1420 Score = 61.9 bits (31), Expect = 3e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 305 caacaaatgcatcaccagcacctgttgtgtc 335 ||||||||||||||||||||||||||||||| Sbjct: 1054 caacaaatgcatcaccagcacctgttgtgtc 1024
>emb|BX815331.1|CNS0ABBH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS52ZE04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1398 Score = 61.9 bits (31), Expect = 3e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 305 caacaaatgcatcaccagcacctgttgtgtc 335 ||||||||||||||||||||||||||||||| Sbjct: 1047 caacaaatgcatcaccagcacctgttgtgtc 1017
>gb|AC020665.6|AC020665 Arabidopsis thaliana chromosome 1 BAC T27F4 genomic sequence, complete sequence Length = 85702 Score = 61.9 bits (31), Expect = 3e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 305 caacaaatgcatcaccagcacctgttgtgtc 335 ||||||||||||||||||||||||||||||| Sbjct: 81655 caacaaatgcatcaccagcacctgttgtgtc 81625
>gb|AC074025.1|AC074025 Arabidopsis thaliana chromosome 1 BAC F28G11 genomic sequence, complete sequence Length = 63773 Score = 61.9 bits (31), Expect = 3e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 305 caacaaatgcatcaccagcacctgttgtgtc 335 ||||||||||||||||||||||||||||||| Sbjct: 56007 caacaaatgcatcaccagcacctgttgtgtc 56037
>ref|NM_117094.1| Arabidopsis thaliana kinase/ ribokinase AT4G10260 mRNA, complete cds Length = 975 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 301 gcaccaacaaatgcatcaccagcacctgttgtgtcaact 339 ||||||||||||| ||||||||| || |||||||||||| Sbjct: 800 gcaccaacaaatgaatcaccagctccagttgtgtcaact 762
>gb|DQ446815.1| Arabidopsis thaliana clone pENTR221-At4g10260 pfkB-type carbohydrate kinase family protein (At4g10260) mRNA, complete cds Length = 975 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 301 gcaccaacaaatgcatcaccagcacctgttgtgtcaact 339 ||||||||||||| ||||||||| || |||||||||||| Sbjct: 800 gcaccaacaaatgaatcaccagctccagttgtgtcaact 762
>emb|AL161517.2|ATCHRIV29 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 29 Length = 199861 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 301 gcaccaacaaatgcatcaccagcacctgttgtgtcaact 339 ||||||||||||| ||||||||| || |||||||||||| Sbjct: 3975 gcaccaacaaatgaatcaccagctccagttgtgtcaact 4013
>emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 28 Length = 198005 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 301 gcaccaacaaatgcatcaccagcacctgttgtgtcaact 339 ||||||||||||| ||||||||| || |||||||||||| Sbjct: 196980 gcaccaacaaatgaatcaccagctccagttgtgtcaact 197018
>emb|AL049488.1|ATF24G24 Arabidopsis thaliana DNA chromosome 4, BAC clone F24G24 (ESSA project) Length = 99856 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 301 gcaccaacaaatgcatcaccagcacctgttgtgtcaact 339 ||||||||||||| ||||||||| || |||||||||||| Sbjct: 17307 gcaccaacaaatgaatcaccagctccagttgtgtcaact 17345
>gb|AF096373.1|T9A4 Arabidopsis thaliana BAC T9A4 Length = 83922 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 301 gcaccaacaaatgcatcaccagcacctgttgtgtcaact 339 ||||||||||||| ||||||||| || |||||||||||| Sbjct: 29634 gcaccaacaaatgaatcaccagctccagttgtgtcaact 29596
>ref|NM_100483.2| Arabidopsis thaliana kinase/ ribokinase AT1G06030 mRNA, complete cds Length = 1021 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 505 tcactgaccttgacaatgtctgcctggtcccagatactcaagatct 550 ||||||||||| | |||||| |||| |||||||||||||| ||||| Sbjct: 611 tcactgaccttaataatgtcagccttgtcccagatactcatgatct 566
>gb|AY099454.1| Lycopersicon esculentum fructokinase mRNA, complete cds Length = 1304 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 302 caccaacaaatgcatcaccagcacctgttgtgtcaact 339 ||||||||||||||||||| || ||||| ||||||||| Sbjct: 964 caccaacaaatgcatcacctgctcctgtggtgtcaact 927
>gb|AY090916.1| Arabidopsis thaliana putative fructokinase (At1g06030) mRNA, complete cds Length = 1021 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 505 tcactgaccttgacaatgtctgcctggtcccagatactcaagatct 550 ||||||||||| | |||||| |||| |||||||||||||| ||||| Sbjct: 611 tcactgaccttaataatgtcagccttgtcccagatactcatgatct 566
>emb|BX828089.1|CNS0A3SN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH50ZH03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1873 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 301 gcaccaacaaatgcatcaccagcacctgttgtgtcaac 338 ||||||||||||| ||||||||| || ||||||||||| Sbjct: 1629 gcaccaacaaatgaatcaccagctccagttgtgtcaac 1592
>gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis thaliana chromosome 1, complete sequence Length = 74316 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 505 tcactgaccttgacaatgtctgcctggtcccagatactcaagatct 550 ||||||||||| | |||||| |||| |||||||||||||| ||||| Sbjct: 26726 tcactgaccttaataatgtcagccttgtcccagatactcatgatct 26681 Score = 44.1 bits (22), Expect = 0.60 Identities = 40/46 (86%) Strand = Plus / Minus Query: 505 tcactgaccttgacaatgtctgcctggtcccagatactcaagatct 550 ||||||||||| | ||||| |||| |||||||||||||| ||||| Sbjct: 24666 tcactgaccttaatgatgtcagccttgtcccagatactcatgatct 24621
>gb|AC148527.20| Medicago truncatula clone mth2-49g13, complete sequence Length = 107439 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 306 aacaaatgcatcaccagcacctgttgtgtcaac 338 |||||||||||| |||||||| ||||||||||| Sbjct: 72665 aacaaatgcatctccagcaccagttgtgtcaac 72633
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 301 gcaccaacaaatgcatcaccagcacctgt 329 ||||||| ||||||||||||||||||||| Sbjct: 872004 gcaccaataaatgcatcaccagcacctgt 871976
>ref|NM_115810.2| Arabidopsis thaliana kinase/ ribokinase AT3G59480 mRNA, complete cds Length = 1218 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 301 gcaccaacaaatgcatcaccagcacctgttgt 332 ||||||||||||| |||||||||||| ||||| Sbjct: 894 gcaccaacaaatgaatcaccagcaccagttgt 863
>emb|AL356014.1|ATF25L23 Arabidopsis thaliana DNA chromosome 3, BAC clone F25L23 Length = 114080 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 301 gcaccaacaaatgcatcaccagcacctgttgt 332 ||||||||||||| |||||||||||| ||||| Sbjct: 111413 gcaccaacaaatgaatcaccagcaccagttgt 111382
>emb|AL138659.1|ATT16L24 Arabidopsis thaliana DNA chromosome 3, BAC clone T16L24 Length = 91851 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 301 gcaccaacaaatgcatcaccagcacctgttgt 332 ||||||||||||| |||||||||||| ||||| Sbjct: 7132 gcaccaacaaatgaatcaccagcaccagttgt 7101
>gb|AC184047.1| Medicago truncatula chromosome 7 BAC clone mte1-40a8, complete sequence Length = 26151 Score = 48.1 bits (24), Expect = 0.038 Identities = 33/36 (91%) Strand = Plus / Plus Query: 302 caccaacaaatgcatcaccagcacctgttgtgtcaa 337 |||||||||| | ||||||||| ||||||||||||| Sbjct: 25978 caccaacaaaagaatcaccagctcctgttgtgtcaa 26013
>gb|AY086378.1| Arabidopsis thaliana clone 24751 mRNA, complete sequence Length = 1217 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Minus Query: 301 gcaccaacaaatgcatcaccagcacctgttgt 332 ||||||||||||| |||||||||||| ||||| Sbjct: 892 gcaccaacaaatgaatcaccagcaccagttgt 861
>ref|NM_100482.1| Arabidopsis thaliana kinase/ ribokinase AT1G06020 mRNA, complete cds Length = 1038 Score = 44.1 bits (22), Expect = 0.60 Identities = 40/46 (86%) Strand = Plus / Minus Query: 505 tcactgaccttgacaatgtctgcctggtcccagatactcaagatct 550 ||||||||||| | ||||| |||| |||||||||||||| ||||| Sbjct: 608 tcactgaccttaatgatgtcagccttgtcccagatactcatgatct 563
>gb|DQ056446.1| Arabidopsis thaliana pfkB-type carbohydrate kinase family protein (At1g06020) mRNA, complete cds Length = 1038 Score = 44.1 bits (22), Expect = 0.60 Identities = 40/46 (86%) Strand = Plus / Minus Query: 505 tcactgaccttgacaatgtctgcctggtcccagatactcaagatct 550 ||||||||||| | ||||| |||| |||||||||||||| ||||| Sbjct: 608 tcactgaccttaatgatgtcagccttgtcccagatactcatgatct 563
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 tggcatagtacttgcatccttg 401 |||||||||||||||||||||| Sbjct: 10246038 tggcatagtacttgcatccttg 10246059
>dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1540_G08 Length = 126263 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 tggcatagtacttgcatccttg 401 |||||||||||||||||||||| Sbjct: 52061 tggcatagtacttgcatccttg 52082
>gb|U64817.1|LEU64817 Lycopersicon esculentum fructokinase (Frk1) mRNA, complete cds Length = 1887 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 309 aaatgcatcaccagcacctgttgtgtcaac 338 |||||||||||||||||| ||||| ||||| Sbjct: 1131 aaatgcatcaccagcaccagttgtatcaac 1102
>ref|XM_580972.2| PREDICTED: Bos taurus similar to apolipoprotein B48 receptor (LOC504800), mRNA Length = 3910 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 401 gacctccaagagtgaccaggaggag 425 |||||||||||| |||||||||||| Sbjct: 936 gacctccaagagagaccaggaggag 960
>ref|XM_753027.1| Ustilago maydis 521 hypothetical protein (UM01973.1) partial mRNA Length = 372 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 506 cactgaccttgacaatgtctgcctggtcc 534 |||||| |||||||||||| ||||||||| Sbjct: 199 cactgagcttgacaatgtccgcctggtcc 171
>emb|CT573077.2| Medicago truncatula chromosome 5 clone mth2-43j18, COMPLETE SEQUENCE Length = 142338 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 236 tcgcctcctcgagcttttcct 256 ||||||||||||||||||||| Sbjct: 130352 tcgcctcctcgagcttttcct 130372
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 gcattggcaaatttaatcgcc 240 ||||||||||||||||||||| Sbjct: 572352 gcattggcaaatttaatcgcc 572332
>gb|AC159106.2| Mus musculus chromosome 14 clone RP23-244I11, complete sequence Length = 168884 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 gcatcaccagcacctgttgtg 333 ||||||||||||||||||||| Sbjct: 74741 gcatcaccagcacctgttgtg 74721
>gb|DQ235199.1| Solanum tuberosum clone 171E03 fructokinase-like mRNA, complete cds Length = 1245 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 406 ccaagagtgaccaggaggagcttaaaggtagg 437 ||||||||||||| ||||||||| ||| |||| Sbjct: 790 ccaagagtgaccaagaggagcttcaagttagg 759
>gb|DQ235181.1| Solanum tuberosum clone 163C10 fructokinase-like mRNA, complete cds Length = 1245 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 406 ccaagagtgaccaggaggagcttaaaggtagg 437 ||||||||||||| ||||||||| ||| |||| Sbjct: 790 ccaagagtgaccaagaggagcttcaagttagg 759
>ref|XM_522547.1| PREDICTED: Pan troglodytes restin (LOC467147), mRNA Length = 6753 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 agcttttcctgatcttgcag 266 |||||||||||||||||||| Sbjct: 4067 agcttttcctgatcttgcag 4048
>gb|AC124614.11| Mus musculus chromosome 10, clone RP24-417L12, complete sequence Length = 173306 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 gtcccagatactcaagatct 550 |||||||||||||||||||| Sbjct: 26531 gtcccagatactcaagatct 26512
>gb|AC125060.4| Mus musculus BAC clone RP23-406B22 from chromosome 10, complete sequence Length = 178936 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 gtcccagatactcaagatct 550 |||||||||||||||||||| Sbjct: 45548 gtcccagatactcaagatct 45567
>gb|AC144522.12| Homo sapiens 12 BAC RP11-481J8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163515 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 tgcattctccatcagctgca 154 |||||||||||||||||||| Sbjct: 62493 tgcattctccatcagctgca 62512
>gb|AC121954.2| Mus musculus BAC clone RP24-218I17 from 6, complete sequence Length = 182855 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gaggagcttaaaggtagggc 439 |||||||||||||||||||| Sbjct: 78119 gaggagcttaaaggtagggc 78138
>emb|AL365223.19| Human DNA sequence from clone RP11-55K22 on chromosome 6 Contains the 3' end of the PEX7 gene for peroxisomal biogenesis factor 7 (PTS2R, RCDP1), a ribosomal protein L7a (RPL7A) pseudogene, a novel gene, the gene for a novel protein similar to 60s ribosomal protein L35a (RPL35A) (possible pseudogene), the 3' end of a novel gene and a CpG island, complete sequence Length = 116855 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tggcatagtacttgcatcct 399 |||||||||||||||||||| Sbjct: 69123 tggcatagtacttgcatcct 69142
>emb|BX571662.1| Wolinella succinogenes, complete genome; segment 6/7 Length = 349859 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 623 cctctttggcaatctccatggcac 646 |||||||||||| ||||||||||| Sbjct: 234661 cctctttggcaaactccatggcac 234684
>gb|U37838.1|BVU37838 Beta vulgaris fructokinase mRNA, complete cds Length = 1299 Score = 40.1 bits (20), Expect = 9.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 406 ccaagagtgaccaggaggagcttaaaggtagggcgccaca 445 ||||||||||||| ||| ||||| ||| ||||| |||||| Sbjct: 748 ccaagagtgaccaagagaagctttaagttagggtgccaca 709
>gb|AY695055.1| Nicotiana tabacum adenosine kinase isoform 2T mRNA, complete cds Length = 1306 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 ccaacaaatgcatcaccagc 323 |||||||||||||||||||| Sbjct: 945 ccaacaaatgcatcaccagc 926
>gb|AY695054.1| Nicotiana tabacum adenosine kinase isoform 2T mRNA, complete cds Length = 1259 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 ccaacaaatgcatcaccagc 323 |||||||||||||||||||| Sbjct: 945 ccaacaaatgcatcaccagc 926
>gb|AY695053.1| Nicotiana tabacum adenosine kinase isoform 2S mRNA, complete cds Length = 1308 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 acaaatgcatcaccagcacc 326 |||||||||||||||||||| Sbjct: 942 acaaatgcatcaccagcacc 923
>emb|Z12823.1|STFRUCM S.tuberosum mRNA for fructokinase Length = 1143 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 406 ccaagagtgaccaggaggagcttaaaggtagg 437 ||||||||||||| ||||||||| ||| |||| Sbjct: 693 ccaagagtgaccaagaggagcttcaagttagg 662
>ref|XM_312327.2| Anopheles gambiae str. PEST ENSANGP00000010594 (ENSANGG00000008105), partial mRNA Length = 912 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 aaatgcatcaccagcacctgttgt 332 |||||||||||||||||| ||||| Sbjct: 783 aaatgcatcaccagcacccgttgt 760
>emb|AJ719121.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT2-21-360, cultivar Bright Yellow 2 Length = 316 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 acaaatgcatcaccagcacc 326 |||||||||||||||||||| Sbjct: 150 acaaatgcatcaccagcacc 131 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,502,325 Number of Sequences: 3902068 Number of extensions: 5502325 Number of successful extensions: 116391 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116198 Number of HSP's gapped (non-prelim): 190 length of query: 683 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 660 effective length of database: 17,143,297,704 effective search space: 11314576484640 effective search space used: 11314576484640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
