Clone Name | rbasdd05 |
---|---|
Clone Library Name | barley_pub |
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 1066 bits (538), Expect = 0.0 Identities = 567/574 (98%), Gaps = 2/574 (0%) Strand = Plus / Minus Query: 1 aaaaaacagnaaatacataactaagatgatacatttgcttcgatctggtgatggtatcaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 aaaaaacag-aaatacataactaagatgatacatttgcttcgatctggtgatggtatcaa 521 Query: 61 gattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 gattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggca 461 Query: 121 tgattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgtt 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 460 tgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgtt 401 Query: 181 gctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtc 341 Query: 241 acagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattc 300 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 acagacggaagtccggcatccaattgtgcagtactcagtcgcatttggttcaccggattc 281 Query: 301 agggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttaca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 agggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttaca 221 Query: 361 accacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagca 420 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 220 accacaagcagttgcgcagactggtcgggaaccaccagcgaaacggcaggcgttgtagca 161 Query: 421 gtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaac 480 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 160 gtttctgcccgtcgtgttcttgcagcaactcttggcttctacttggacctgctccagaac 101 Query: 481 taaacccaatatgagaacacaaataaccacgctcttaatacttcttgttggttgccatgg 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 100 taaacccaatatgagaacacaaataaccacgctcttaatac-tcttgttggttgccatgg 42 Query: 541 ttggctagttggccttaatttctcaagtagaatg 574 |||||| ||||||||||||||||||||||||||| Sbjct: 41 ttggctggttggccttaatttctcaagtagaatg 8
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 1066 bits (538), Expect = 0.0 Identities = 567/574 (98%), Gaps = 2/574 (0%) Strand = Plus / Minus Query: 1 aaaaaacagnaaatacataactaagatgatacatttgcttcgatctggtgatggtatcaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 aaaaaacag-aaatacataactaagatgatacatttgcttcgatctggtgatggtatcaa 521 Query: 61 gattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 gattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggca 461 Query: 121 tgattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgtt 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 460 tgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgtt 401 Query: 181 gctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtc 341 Query: 241 acagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattc 300 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 acagacggaagtccggcatccaattgtgcagtactcagtcgcatttggttcaccggattc 281 Query: 301 agggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttaca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 agggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttaca 221 Query: 361 accacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagca 420 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 220 accacaagcagttgcgcagactggtcgggaaccaccagcgaaacggcaggcgttgtagca 161 Query: 421 gtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaac 480 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 160 gtttctgcccgtcgtgttcttgcagcaactcttggcttctacttggacctgctccagaac 101 Query: 481 taaacccaatatgagaacacaaataaccacgctcttaatacttcttgttggttgccatgg 540 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 100 taaacccaatatgagaacacaaataaccacgctcttaatac-tcttgttggttgccatgg 42 Query: 541 ttggctagttggccttaatttctcaagtagaatg 574 |||||| ||||||||||||||||||||||||||| Sbjct: 41 ttggctggttggccttaatttctcaagtagaatg 8
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 1003 bits (506), Expect = 0.0 Identities = 528/534 (98%), Gaps = 1/534 (0%) Strand = Plus / Minus Query: 41 cgatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 cgatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatag 481 Query: 101 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcatta 160 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 480 aaatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcatta 421 Query: 161 cagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgg 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 cagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgg 361 Query: 221 gaaacattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtc 280 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 360 gaaacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtc 301 Query: 281 gcatttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgtt 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gcatttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgtt 241 Query: 341 gggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcg 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 240 gggccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcg 181 Query: 401 aaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttct 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 180 aaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttct 121 Query: 461 acttggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaata 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 acttggacctgctccagaactaaacccaatatgagaacacaaataaccacgctcttaata 61 Query: 521 cttcttgttggttgccatggttggctagttggccttaatttctcaagtagaatg 574 | |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 60 c-tcttgttggttgccatggttggctggttggccttaatttctcaagtagaatg 8
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 957 bits (483), Expect = 0.0 Identities = 502/507 (99%), Gaps = 1/507 (0%) Strand = Plus / Minus Query: 1 aaaaaacagnaaatacataactaagatgatacatttgcttcgatctggtgatggtatcaa 60 ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 506 aaaaaacag-aaatacataactaagatgatacatttgcttcgatgtggtgatggtatcaa 448 Query: 61 gattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 gattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggca 388 Query: 121 tgattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgtt 180 |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 387 tgattaggcttcaagagactgaatgacttcaccatcattacagaaacgggcacatgcgtt 328 Query: 181 gctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 gctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtc 268 Query: 241 acagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 acagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattc 208 Query: 301 agggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttaca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 agggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttaca 148 Query: 361 accacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagca 420 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 147 accacaagcagttgcgcagactggtcgggaaccaccagcgaaacggcaggcgttgtagca 88 Query: 421 gtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87 gtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaac 28 Query: 481 taaacccaatatgagaacacaaataac 507 ||||||||||||||||||||||||||| Sbjct: 27 taaacccaatatgagaacacaaataac 1
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 799 bits (403), Expect = 0.0 Identities = 413/415 (99%), Gaps = 1/415 (0%) Strand = Plus / Minus Query: 124 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355 Query: 184 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295 Query: 244 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235 Query: 304 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 175 Query: 364 acaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcagtt 423 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 174 acaagcagttgcgcagactggtcgggaaccaccggcgaaatggcaggcgttgtagcagtt 115 Query: 424 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 55 Query: 484 acccaatatgagaacacaaataaccacgctcttaatacttcttgttggttgccat 538 |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 54 acccaatatgagaacacaaataaccacgctcttaatac-tcttgttggttgccat 1
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 787 bits (397), Expect = 0.0 Identities = 416/421 (98%), Gaps = 1/421 (0%) Strand = Plus / Minus Query: 1 aaaaaacagnaaatacataactaagatgatacatttgcttcgatctggtgatggtatcaa 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 aaaaaacag-aaatacataactaagatgatacatttgcttcgatctggtgatggtatcaa 362 Query: 61 gattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggca 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gattgttgaacagaaaatgaaaaaacgaccttggccatagaaatcatgcccaagaaggca 302 Query: 121 tgattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgtt 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 301 tgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgcgtt 242 Query: 181 gctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtc 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 241 gctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccaggttgtc 182 Query: 241 acagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 acagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattc 122 Query: 301 agggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttaca 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 121 agggagaagattcagcttaggatagtccctaggacaggttgggccgcttatgattttaca 62 Query: 361 accacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 accacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagca 2 Query: 421 g 421 | Sbjct: 1 g 1
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 628 bits (317), Expect = e-177 Identities = 503/561 (89%), Gaps = 3/561 (0%) Strand = Plus / Minus Query: 2 aaaaacagnaaatacataactaagatgatacatttgcttcgat-ctggtgatggtatcaa 60 |||||||| |||| ||||| ||||||||||||||| ||||||| | | |||||||||||| Sbjct: 561 aaaaacag-aaatgcataagtaagatgatacatttccttcgatacagctgatggtatcaa 503 Query: 61 gattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggca 120 |||| || || | |||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 502 gattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggca 443 Query: 121 tgattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgtt 180 ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 442 tgattaggcttcaacagactgaatgactgcaccatcattacaaaaacgggcacatgcgtt 383 Query: 181 gctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtc 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 382 gctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtc 323 Query: 241 acagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattc 300 |||||| ||| ||||||||||||| |||||||||| ||| ||| ||||||||||||||| Sbjct: 322 acagacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccggattc 263 Query: 301 agggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttaca 360 |||||||||||| || ||||||||||| ||||| ||| |||| || |||||||||||||| Sbjct: 262 agggagaagattaagtttaggatagtcactagggcattttggaccacttatgattttaca 203 Query: 361 accacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagca 420 || ||||||| |||||||||||| ||||||||||| ||||||||||| | ||||||||| Sbjct: 202 acgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagtgttgtagca 143 Query: 421 gtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaac 480 |||||| | ||||| |||||||||||| || || || || ||||||||||||||||| Sbjct: 142 gtttctagctaacgtgtccttgcagcaactttttccctccacctggacctgctccagaac 83 Query: 481 taaacccaatatgagaacacaaataaccacgctcttaatacttcttgttggttgccatgg 540 |||||||| ||||||||||||||| ||||| |||||||||| ||||| ||| |||||||| Sbjct: 82 taaacccagtatgagaacacaaatgaccacactcttaatac-tcttgctgggtgccatgg 24 Query: 541 ttggctagttggccttaattt 561 |||||| ||||| ||||||| Sbjct: 23 ttggcttcttggctttaattt 3
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 613 bits (309), Expect = e-172 Identities = 482/537 (89%), Gaps = 2/537 (0%) Strand = Plus / Minus Query: 11 aaatacataactaagatgatacatttgcttcgat-ctggtgatggtatcaagattgttga 69 |||||||||| |||||||||||||| ||||| || | | |||||||||||||||| || | Sbjct: 546 aaatacataagtaagatgatacattggcttccatacagctgatggtatcaagattattca 487 Query: 70 acagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggc 129 | | |||||||||| |||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 486 agacaaaatgacaatacgaccatggccatagaaatcatgcacaagaaggcatgattaggc 427 Query: 130 ttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgctgcagag 189 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 426 ttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgctgcagag 367 Query: 190 tcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcacagacgga 249 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 366 tcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcacagacaga 307 Query: 250 agtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagggagaag 309 | ||||||||||||| |||||||||| || ||| |||||||||||||||||||||||| Sbjct: 306 attcctgcatccaatggtgcagtactgcgtgacatctggttcaccggattcagggagaag 247 Query: 310 attcagcttaggatagtccctaggacatgttgggccgcttatgattttacaaccacaagc 369 |||||| ||||||||||| ||||| ||| |||| || |||||||||||||||| |||||| Sbjct: 246 attcagtttaggatagtcactagggcattttggaccacttatgattttacaacgacaagc 187 Query: 370 agttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgtagcagtttctgcc 429 | |||||||||||| ||||||||||| |||||| |||| | ||||||||||||||| | Sbjct: 186 acctgcgcagactggacgggaaccacccgcgaaatggcaagtgttgtagcagtttctagc 127 Query: 430 cgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaaacccaa 489 ||||| |||||||||||| || || || || ||||||||||||||||||||||||| Sbjct: 126 taacgtgtccttgcagcaactttttccctccacctggacctgctccagaactaaacccag 67 Query: 490 tatgagaacacaaataaccacgctcttaatacttcttgttggttgccatggttggct 546 ||||||||||||||| ||||| |||||||||| ||||| ||| |||||||||||||| Sbjct: 66 tatgagaacacaaatgaccacactcttaatac-tcttgctgggtgccatggttggct 11
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 521 bits (263), Expect = e-145 Identities = 279/283 (98%), Gaps = 1/283 (0%) Strand = Plus / Minus Query: 292 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 351 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 1738 Query: 352 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1737 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 1678 Query: 412 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1677 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 1618 Query: 472 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatacttcttgttgg 531 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1617 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatac-tcttgttgg 1559 Query: 532 ttgccatggttggctagttggccttaatttctcaagtagaatg 574 ||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 1558 ttgccatggttggctggttggccttaatttctcatgtagaatg 1516 Score = 349 bits (176), Expect = 6e-93 Identities = 182/184 (98%) Strand = Plus / Minus Query: 42 gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2237 gatctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccataga 2178 Query: 102 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacatcaccatcattac 161 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2177 aatcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattac 2118 Query: 162 agaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggg 221 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2117 agaaacgggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacggg 2058 Query: 222 aaac 225 |||| Sbjct: 2057 aaac 2054 Score = 123 bits (62), Expect = 7e-25 Identities = 68/70 (97%) Strand = Plus / Minus Query: 225 cattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcat 284 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904 Query: 285 ttggttcacc 294 |||||||||| Sbjct: 1903 ttggttcacc 1894
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 448 bits (226), Expect = e-123 Identities = 345/382 (90%), Gaps = 2/382 (0%) Strand = Plus / Minus Query: 2 aaaaacagnaaatacataactaagatgatacatttgcttcgat-ctggtgatggtatcaa 60 |||||||| |||| ||||| ||||||||||||||| ||||||| | | |||||||||||| Sbjct: 381 aaaaacag-aaatgcataagtaagatgatacatttccttcgatacagctgatggtatcaa 323 Query: 61 gattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggca 120 |||| || || | |||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 322 gattattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggca 263 Query: 121 tgattaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgtt 180 |||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 262 tgattaggattcaacagactgaatgactgcaccatcattacaaaaacgggcacatgcgtt 203 Query: 181 gctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtc 240 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 202 gctgcagagtcccatgtcgaatttcatctcttggccatggaaaacattgtccatgttgtc 143 Query: 241 acagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattc 300 |||||| ||| ||||||||||||| |||||||||| ||| ||| |||||||||||||| Sbjct: 142 acagacagaattcctgcatccaatggtgcagtactgagtgacatcgggttcaccggattc 83 Query: 301 agggagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttaca 360 |||||||||||| || ||||||||||| ||||| ||| |||| || |||||||||||||| Sbjct: 82 agggagaagattaagtttaggatagtcactagggcattttggaccacttatgattttaca 23 Query: 361 accacaagcagttgcgcagact 382 || ||||||| |||||||||| Sbjct: 22 acgacaagcacctgcgcagact 1
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 301 bits (152), Expect = 1e-78 Identities = 201/216 (93%), Gaps = 1/216 (0%) Strand = Plus / Minus Query: 11 aaatacataactaagatgatacatttgcttcgat-ctggtgatggtatcaagattgttga 69 |||||||||| |||||||||||||| ||||| || | | |||||||||||||||| || | Sbjct: 2246 aaatacataagtaagatgatacattggcttccatacagctgatggtatcaagattattca 2187 Query: 70 acagaaaatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggc 129 | | |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2186 agacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggcatgattaggc 2127 Query: 130 ttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgctgcagag 189 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2126 ttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgctgcagag 2067 Query: 190 tcccatgtcgaatttcatctcttggccacgggaaac 225 ||||||||||||||||||||||||||||||| |||| Sbjct: 2066 tcccatgtcgaatttcatctcttggccacggaaaac 2031 Score = 268 bits (135), Expect = 2e-68 Identities = 247/283 (87%), Gaps = 1/283 (0%) Strand = Plus / Minus Query: 292 accggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttat 351 |||||||||||||||||||||||| ||||||||||| ||||| ||| |||| || ||||| Sbjct: 1776 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 1717 Query: 352 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 411 ||||||||||| ||||||| |||||||||||| ||||||||||| ||||||||||| | Sbjct: 1716 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 1657 Query: 412 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 471 ||||||||||||||| | ||||| |||||||||||| || || || || |||||||| Sbjct: 1656 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 1597 Query: 472 ctccagaactaaacccaatatgagaacacaaataaccacgctcttaatacttcttgttgg 531 ||||||||||||| ||| ||||||||||||||| ||||| |||||||||| ||||| ||| Sbjct: 1596 ctccagaactaaaaccagtatgagaacacaaatgaccacactcttaatac-tcttgctgg 1538 Query: 532 ttgccatggttggctagttggccttaatttctcaagtagaatg 574 |||||||||||||| ||||| |||||||||| || |||||| Sbjct: 1537 gtgccatggttggcttcttggctttaatttctccagaagaatg 1495 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 225 cattgtccatgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcat 284 |||||||||||||||||||||| ||| || |||||||||| |||||||||| ||| ||| Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878 Query: 285 ttggttcacc 294 ||||||||| Sbjct: 1877 ctggttcacc 1868
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 200 bits (101), Expect = 4e-48 Identities = 378/467 (80%), Gaps = 5/467 (1%) Strand = Plus / Minus Query: 87 gaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaacagactgaatga 146 ||||| ||||| ||||||||||| ||||| ||||||||| |||| | ||| |||||| Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437 Query: 147 catcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 206 | |||| | ||||||||||| ||||| | ||| |||||||| |||||||| ||||| Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377 Query: 207 tctcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatccaattg 266 ||||||||||| | ||||||||||||||||||||| ||||||||| ||||||| || | Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317 Query: 267 tgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttaggatagt 326 ||||||||||||| ||| ||||||||||||||| | ||||||| ||| |||| |||| Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaagatgcagtttagaatagc 257 Query: 327 ccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcagactggtc 386 | |||||||||| ||| || ||||||||| |||||| || ||||||| ||| | Sbjct: 256 catcaggacatgtt---ccgtctacgattttacatccacaaagagatgcgcagcgtggcc 200 Query: 387 gggaaccaccggcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagc 446 ||||| ||||| ||||||||| |||| ||||||||||| | | ||| || ||||| Sbjct: 199 gggaagtaccggttaaacggcagacgttatagcagtttcttgcagatgtgctcgggcagc 140 Query: 447 aactcttgccttctacttggacctgctccagaactaaacccaatatgagaacacaaataa 506 ||||||| || ||||| ||||||||| ||||||||||||| | || ||| ||||||| | Sbjct: 139 aactctttccctctacctggacctgccccagaactaaacctagtacgaggacacaaagca 80 Query: 507 ccacgctcttaatacttcttgttggttgccatggttggctagttggc 553 |||| | ||||| || | ||| |||||||||||| |||||||||||| Sbjct: 79 ccacacacttaagacct-ttggtggttgccatgg-tggctagttggc 35
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 172 bits (87), Expect = 8e-40 Identities = 228/275 (82%) Strand = Plus / Minus Query: 233 atgttgtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttca 292 ||||||||||| ||||||||| |||||||||| ||||||||||||| |||| || |||| Sbjct: 386 atgttgtcacaaacggaagtcatgcatccaatagtgcagtactcagctgcatctgcttca 327 Query: 293 ccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgcttatg 352 ||| |||||| |||||||| | | ||||| | || || ||||| |||| || || | Sbjct: 326 ccgtattcagagagaagatgctgtttaggccaatcacttggacaagttgtaacgtctaag 267 Query: 353 attttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcg 412 | |||||||||||| | | |||||||||||| || | | |||| || ||||||||| | Sbjct: 266 agtttacaaccacatggacctgcgcagactgggcgcggagcaccagctaaacggcagaca 207 Query: 413 ttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgc 472 |||||||||||| | |||||||| ||||||||||||||||||| ||||| ||||||||| Sbjct: 206 ttgtagcagtttattgccgtcgtgctcttgcagcaactcttgccctctacctggacctgc 147 Query: 473 tccagaactaaacccaatatgagaacacaaataac 507 |||||||||||||||| ||||| | ||||||||| Sbjct: 146 tccagaactaaacccagcatgaggaaacaaataac 112 Score = 79.8 bits (40), Expect = 9e-12 Identities = 118/144 (81%) Strand = Plus / Minus Query: 76 aatgacaaaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaac 135 |||| |||||||||| ||||||||||||| | || | ||| |||||||||||| | || Sbjct: 558 aatggcaaaacgaccatggccatagaaataaggcacgagagtgcatgattaggccccgac 499 Query: 136 agactgaatgacatcaccatcattacagaaacgggcacatgcgttgctgcagagtcccat 195 ||| || |||| |||| | |||||||||||| ||||||||||| |||||| | ||| Sbjct: 498 agatggattgacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcat 439 Query: 196 gtcgaatttcatctcttggccacg 219 ||||| ||||||||||||||||| Sbjct: 438 gtcgatgttcatctcttggccacg 415
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds Length = 616 Score = 111 bits (56), Expect = 3e-21 Identities = 95/108 (87%) Strand = Plus / Minus Query: 411 cgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacct 470 |||||||||||||||| |||| |||| ||||||||||||||| || ||||||||||| | Sbjct: 149 cgttgtagcagtttcttgccgtggtgtccttgcagcaactctttccctctacttggacat 90 Query: 471 gctccagaactaaacccaatatgagaacacaaataaccacgctcttaa 518 |||||||||||| ||||||| ||||||||||| ||||| ||||||| Sbjct: 89 gctccagaactatccccaatacaagaacacaaatgaccacactcttaa 42
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene Length = 892 Score = 79.8 bits (40), Expect = 9e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 412 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 471 ||||||||||||||| || ||| |||||||||||||||||||||||||||| ||||| Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 73 Query: 472 ctccagaactaaacccaatatgag 495 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin Length = 641 Score = 79.8 bits (40), Expect = 9e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 412 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 471 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||| Sbjct: 189 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 130 Query: 472 ctccagaactaaacccaatatgag 495 |||||||| || |||| |||||| Sbjct: 129 ttccagaaccaaccccagtatgag 106
>emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene Length = 901 Score = 79.8 bits (40), Expect = 9e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 412 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 471 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||| Sbjct: 132 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 73 Query: 472 ctccagaactaaacccaatatgag 495 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds Length = 673 Score = 79.8 bits (40), Expect = 9e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 412 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 471 ||||||||||||||| || ||| |||||||||||||||||||||||||||| ||||| Sbjct: 140 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 81 Query: 472 ctccagaactaaacccaatatgag 495 |||||||| || |||| |||||| Sbjct: 80 ttccagaaccaaccccagtatgag 57
>dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3, complete cds Length = 915 Score = 79.8 bits (40), Expect = 9e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 412 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 471 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||| Sbjct: 177 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 118 Query: 472 ctccagaactaaacccaatatgag 495 |||||||| || |||| |||||| Sbjct: 117 ttccagaaccaaccccagtatgag 94
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds Length = 677 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 439 cttgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgagaac 498 ||||||||||||||| || ||||||||||||||||||||||||| ||||||| || || Sbjct: 122 cttgcagcaactctttccctctacttggacctgctccagaactatccccaatacaaggac 63 Query: 499 acaaataaccacgctcttaa 518 |||||| || || ||||||| Sbjct: 62 acaaatgactacactcttaa 43
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene Length = 897 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 412 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 471 ||||||||||||||| || ||| |||||||||||||||| ||||||||||| ||||| Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactctttccttctacttgcacctg 73 Query: 472 ctccagaactaaacccaatatgag 495 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|Z13008.1|HVBHORD H.vulgare mRNA for beta-hordothionin Length = 535 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 441 tgcagcaactcttgccttctacttggacctgctccagaactaaacccaatatgag 495 ||||||||||||||||||||||||| || || |||||||| || |||| |||||| Sbjct: 127 tgcagcaactcttgccttctacttgcacatgttccagaaccaaccccagtatgag 73
>emb|X05901.1|HVTH1AR Barley mRNA for toxin alpha-hordothionin Length = 569 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 412 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 471 ||||||||||||||| || ||| || ||||||||||||||||||||||||| ||||| Sbjct: 107 gttgtagcagtttcttcctagggtgctcctgcagcaactcttgccttctacttgcacctg 48 Query: 472 ctccagaac 480 || ||||| Sbjct: 47 ttcgagaac 39
>gb|M23080.1|BLYHORA Hordeum vulgare alpha-hordothionin (Hth-1) gene, complete cds Length = 1805 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 412 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 471 ||||||||||||||| || ||| || ||||||||||||||||||||||||| ||||| Sbjct: 485 gttgtagcagtttcttcctagggtgctcctgcagcaactcttgccttctacttgcacctg 426 Query: 472 ctccagaac 480 || ||||| Sbjct: 425 ttcgagaac 417
>emb|X96446.1|TACSPUR1B T.aestivum Pur-B1 gene, cultivar Chinese Spring Length = 888 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 412 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 471 ||||||||||||||| ||| ||| || ||||||| |||||||||||||| || | ||| Sbjct: 132 gttgtagcagtttcttcccagggtgctcctgcagcagctcttgccttctacctgcagctg 73 Query: 472 ctccagaactaaacccaatatgag 495 |||||||| || |||| |||||| Sbjct: 72 ttccagaaccaaccccagtatgag 49
>emb|X70666.1|TAPURD1A T.aestivum mRNA for alpha2-purothionin Length = 567 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 412 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 471 ||||||||||||||| ||| ||| || ||||||| |||||||||||||| || | ||| Sbjct: 91 gttgtagcagtttcttcccagggtgctcctgcagcagctcttgccttctacctgcagctg 32 Query: 472 ctccagaactaaacccaatatgag 495 |||||||| || |||| |||||| Sbjct: 31 ttccagaaccaaccccagtatgag 8
>emb|BX248402.13| Zebrafish DNA sequence from clone CH211-226P14 in linkage group 14, complete sequence Length = 137130 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 143 atgacatcaccatcattacagaaac 167 |||||||||||||||||||| |||| Sbjct: 27486 atgacatcaccatcattacataaac 27462
>emb|BX004990.12| Zebrafish DNA sequence from clone DKEY-12H12, complete sequence Length = 201461 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 143 atgacatcaccatcattacagaaac 167 |||||||||||||||||||| |||| Sbjct: 188699 atgacatcaccatcattacataaac 188723
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 caagattgttgaacagaaaat 78 ||||||||||||||||||||| Sbjct: 6740764 caagattgttgaacagaaaat 6740784
>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1131G07 Length = 133992 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 caagattgttgaacagaaaat 78 ||||||||||||||||||||| Sbjct: 61817 caagattgttgaacagaaaat 61837
>ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on chromosome 15 Length = 1523 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 cgtgttcttgcagcaactct 452 |||||||||||||||||||| Sbjct: 947 cgtgttcttgcagcaactct 966
>gb|AC101677.8| Mus musculus chromosome 10, clone RP23-138N1, complete sequence Length = 206087 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 atgacatcaccatcattaca 162 |||||||||||||||||||| Sbjct: 32100 atgacatcaccatcattaca 32119
>gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, complete sequence Length = 173428 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 cgtgttcttgcagcaactct 452 |||||||||||||||||||| Sbjct: 54209 cgtgttcttgcagcaactct 54190
>emb|CR931735.1| Medicago truncatula chromosome 5 clone mth2-37f4, COMPLETE SEQUENCE Length = 114414 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 aaatacataactaagatgat 30 |||||||||||||||||||| Sbjct: 70952 aaatacataactaagatgat 70971
>gb|AC146572.11| Medicago truncatula clone mth2-104c10, complete sequence Length = 109548 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 aaatacataactaagatgat 30 |||||||||||||||||||| Sbjct: 645 aaatacataactaagatgat 664
>gb|AC022395.4| Homo sapiens chromosome 10 clone RP11-354M20, complete sequence Length = 193669 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aactaagatgatacatttgc 38 |||||||||||||||||||| Sbjct: 96493 aactaagatgatacatttgc 96512
>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence Length = 175838 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 aacccaatatgagaacacaa 502 |||||||||||||||||||| Sbjct: 112938 aacccaatatgagaacacaa 112957
>gb|AC026188.6| Homo sapiens chromosome 3 clone RP11-319I18 map 3p, complete sequence Length = 177721 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 aagattgttgaacagaaaat 78 |||||||||||||||||||| Sbjct: 113658 aagattgttgaacagaaaat 113677
>gb|AC158631.6| Mus musculus 10 BAC RP23-424I1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206425 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 atgacatcaccatcattaca 162 |||||||||||||||||||| Sbjct: 52069 atgacatcaccatcattaca 52050
>gb|AC133435.2| Homo sapiens 3 BAC RP11-343B5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 116556 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 cagactgaatgacatcacca 154 |||||||||||||||||||| Sbjct: 64821 cagactgaatgacatcacca 64802
>gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6, complete sequence Length = 172551 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 aacccaatatgagaacacaa 502 |||||||||||||||||||| Sbjct: 31644 aacccaatatgagaacacaa 31663
>gb|AC155325.5| Mus musculus 10 BAC RP24-86C24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 171402 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 atgacatcaccatcattaca 162 |||||||||||||||||||| Sbjct: 34723 atgacatcaccatcattaca 34704
>gb|AC005879.3|AC005879 citb_287_c_20, complete sequence Length = 190982 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 aactaagatgatacatttgc 38 |||||||||||||||||||| Sbjct: 32396 aactaagatgatacatttgc 32377
>gb|AY487430.1| Uncultured organism clone 2A15 nitrilase (BD5338) gene, complete cds Length = 1047 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 ccttggccatagaaatcatgccca 112 |||||||||| ||||||||||||| Sbjct: 862 ccttggccattgaaatcatgccca 839
>gb|AC068314.6| Homo sapiens chromosome 3 clone RP11-194D21 map 3p, complete sequence Length = 179814 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 aagattgttgaacagaaaat 78 |||||||||||||||||||| Sbjct: 3697 aagattgttgaacagaaaat 3716 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,534,479 Number of Sequences: 3902068 Number of extensions: 4534479 Number of successful extensions: 81464 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81340 Number of HSP's gapped (non-prelim): 103 length of query: 575 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 552 effective length of database: 17,143,297,704 effective search space: 9463100332608 effective search space used: 9463100332608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)