Clone Name | rbasdd03 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 242 bits (122), Expect = 1e-60 Identities = 325/393 (82%) Strand = Plus / Plus Query: 121 ccatgccaggcccatataatgtccttgagtgctggccggatgccctcctccaatagcttc 180 |||||||||||| | | ||||||||| || |||||||||||||||||||||| ||||| Sbjct: 678334 ccatgccaggccaagacaatgtccttcagagctggccggatgccctcctccagtagctgt 678393 Query: 181 tggtactccagagaatcaccgntcgtttgtttcatctcaatgagatggtacgaggggctg 240 ||||||||| ||||| || | |||||||||||||| |||| ||| || || | | | Sbjct: 678394 cggtactccaatgaatcgccacttgtttgtttcatctcgatgatatgataggaagtggta 678453 Query: 241 atctcgaagatctccgagtcaaactgaagaacaccattcctgccttccttcctcacttgc 300 | ||| || ||||| |||||||||||||||||||||||| || ||||||||| ||||| Sbjct: 678454 acctcaaatatctctatgtcaaactgaagaacaccattccttccctccttcctcccttgc 678513 Query: 301 atcttgacgacaccattatccttcttcctcaccctgagattcagctgctttgcgacatct 360 ||||| || |||||||| || |||||||| ||||||||||| ||| |||||| |||||| Sbjct: 678514 atcttcactacaccattgtctttcttccttaccctgagatttagcgcctttgctacatct 678573 Query: 361 tccagctttgagacgatggctgaggcaggctgttctgaagtgaaccttgcttcctttttg 420 || |||||||||| |||| |||||||| | ||||||||||||||||| || ||| | Sbjct: 678574 tctagctttgagattatggttgaggcagatttatctgaagtgaaccttgcctcatttctc 678633 Query: 421 ctctccttctcgatgaataggccagagagatcaaaccctgtggagaaagagatgatttca 480 | ||||| | ||||| | |||||||||||||||||| ||||||||||||| |||||| Sbjct: 678634 cattcctttacaatgaacatgccagagagatcaaaccccttggagaaagagataatttca 678693 Query: 481 aaggcatttagatttgtcaccgccaggggcttc 513 |||||||||| |||||||| | || ||||||| Sbjct: 678694 aaggcatttaagtttgtcactgacatgggcttc 678726 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 610 ttctccccaggacctttccggaaccaggtggactcctttatcttctggatcgatatcctc 669 |||||| |||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 678823 ttctcctcaggacctttccggaaccaggtagactcctttatcttctggattgaaatcctt 678882 Query: 670 ttgttaggatcagggtccatgatcttgtgcaaca 703 || | || | |||||||||||||||| ||||| Sbjct: 678883 gtgcttgggttggggtccatgatcttgtacaaca 678916
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 242 bits (122), Expect = 1e-60 Identities = 325/393 (82%) Strand = Plus / Plus Query: 121 ccatgccaggcccatataatgtccttgagtgctggccggatgccctcctccaatagcttc 180 |||||||||||| | | ||||||||| || |||||||||||||||||||||| ||||| Sbjct: 678334 ccatgccaggccaagacaatgtccttcagagctggccggatgccctcctccagtagctgt 678393 Query: 181 tggtactccagagaatcaccgntcgtttgtttcatctcaatgagatggtacgaggggctg 240 ||||||||| ||||| || | |||||||||||||| |||| ||| || || | | | Sbjct: 678394 cggtactccaatgaatcgccacttgtttgtttcatctcgatgatatgataggaagtggta 678453 Query: 241 atctcgaagatctccgagtcaaactgaagaacaccattcctgccttccttcctcacttgc 300 | ||| || ||||| |||||||||||||||||||||||| || ||||||||| ||||| Sbjct: 678454 acctcaaatatctctatgtcaaactgaagaacaccattccttccctccttcctcccttgc 678513 Query: 301 atcttgacgacaccattatccttcttcctcaccctgagattcagctgctttgcgacatct 360 ||||| || |||||||| || |||||||| ||||||||||| ||| |||||| |||||| Sbjct: 678514 atcttcactacaccattgtctttcttccttaccctgagatttagcgcctttgctacatct 678573 Query: 361 tccagctttgagacgatggctgaggcaggctgttctgaagtgaaccttgcttcctttttg 420 || |||||||||| |||| |||||||| | ||||||||||||||||| || ||| | Sbjct: 678574 tctagctttgagattatggttgaggcagatttatctgaagtgaaccttgcctcatttctc 678633 Query: 421 ctctccttctcgatgaataggccagagagatcaaaccctgtggagaaagagatgatttca 480 | ||||| | ||||| | |||||||||||||||||| ||||||||||||| |||||| Sbjct: 678634 cattcctttacaatgaacatgccagagagatcaaaccccttggagaaagagataatttca 678693 Query: 481 aaggcatttagatttgtcaccgccaggggcttc 513 |||||||||| |||||||| | || ||||||| Sbjct: 678694 aaggcatttaagtttgtcactgacatgggcttc 678726 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Plus Query: 610 ttctccccaggacctttccggaaccaggtggactcctttatcttctggatcgatatcctc 669 |||||| |||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 678823 ttctcctcaggacctttccggaaccaggtagactcctttatcttctggattgaaatcctt 678882 Query: 670 ttgttaggatcagggtccatgatcttgtgcaaca 703 || | || | |||||||||||||||| ||||| Sbjct: 678883 gtgcttgggttggggtccatgatcttgtacaaca 678916
>emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136_E08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118211 Score = 242 bits (122), Expect = 1e-60 Identities = 325/393 (82%) Strand = Plus / Minus Query: 121 ccatgccaggcccatataatgtccttgagtgctggccggatgccctcctccaatagcttc 180 |||||||||||| | | ||||||||| || |||||||||||||||||||||| ||||| Sbjct: 100800 ccatgccaggccaagacaatgtccttcagagctggccggatgccctcctccagtagctgt 100741 Query: 181 tggtactccagagaatcaccgntcgtttgtttcatctcaatgagatggtacgaggggctg 240 ||||||||| ||||| || | |||||||||||||| |||| ||| || || | | | Sbjct: 100740 cggtactccaatgaatcgccacttgtttgtttcatctcgatgatatgataggaagtggta 100681 Query: 241 atctcgaagatctccgagtcaaactgaagaacaccattcctgccttccttcctcacttgc 300 | ||| || ||||| |||||||||||||||||||||||| || ||||||||| ||||| Sbjct: 100680 acctcaaatatctctatgtcaaactgaagaacaccattccttccctccttcctcccttgc 100621 Query: 301 atcttgacgacaccattatccttcttcctcaccctgagattcagctgctttgcgacatct 360 ||||| || |||||||| || |||||||| ||||||||||| ||| |||||| |||||| Sbjct: 100620 atcttcactacaccattgtctttcttccttaccctgagatttagcgcctttgctacatct 100561 Query: 361 tccagctttgagacgatggctgaggcaggctgttctgaagtgaaccttgcttcctttttg 420 || |||||||||| |||| |||||||| | ||||||||||||||||| || ||| | Sbjct: 100560 tctagctttgagattatggttgaggcagatttatctgaagtgaaccttgcctcatttctc 100501 Query: 421 ctctccttctcgatgaataggccagagagatcaaaccctgtggagaaagagatgatttca 480 | ||||| | ||||| | |||||||||||||||||| ||||||||||||| |||||| Sbjct: 100500 cattcctttacaatgaacatgccagagagatcaaaccccttggagaaagagataatttca 100441 Query: 481 aaggcatttagatttgtcaccgccaggggcttc 513 |||||||||| |||||||| | || ||||||| Sbjct: 100440 aaggcatttaagtttgtcactgacatgggcttc 100408 Score = 91.7 bits (46), Expect = 3e-15 Identities = 82/94 (87%) Strand = Plus / Minus Query: 610 ttctccccaggacctttccggaaccaggtggactcctttatcttctggatcgatatcctc 669 |||||| |||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 100311 ttctcctcaggacctttccggaaccaggtagactcctttatcttctggattgaaatcctt 100252 Query: 670 ttgttaggatcagggtccatgatcttgtgcaaca 703 || | || | |||||||||||||||| ||||| Sbjct: 100251 gtgcttgggttggggtccatgatcttgtacaaca 100218
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 218 bits (110), Expect = 2e-53 Identities = 322/393 (81%) Strand = Plus / Plus Query: 121 ccatgccaggcccatataatgtccttgagtgctggccggatgccctcctccaatagcttc 180 |||||| ||||| | | ||||||||| || |||||||||||||||||||||| ||||| Sbjct: 629880 ccatgctaggccaagacaatgtccttcagagctggccggatgccctcctccagtagctgt 629939 Query: 181 tggtactccagagaatcaccgntcgtttgtttcatctcaatgagatggtacgaggggctg 240 ||||||||| ||||| || | |||||||||||||| |||| ||| || || | | | Sbjct: 629940 cggtactccaatgaatcgccacttgtttgtttcatctcgatgatatgataggaagtggta 629999 Query: 241 atctcgaagatctccgagtcaaactgaagaacaccattcctgccttccttcctcacttgc 300 | ||| || ||||| |||||||||||||||||||||||| || ||||||||| ||||| Sbjct: 630000 acctcaaatatctctatgtcaaactgaagaacaccattccttccctccttcctcccttgc 630059 Query: 301 atcttgacgacaccattatccttcttcctcaccctgagattcagctgctttgcgacatct 360 ||||| || |||||||| || |||||||| ||||||||||| ||| |||||| |||||| Sbjct: 630060 atcttcactacaccattgtctttcttccttaccctgagatttagcgcctttgctacatct 630119 Query: 361 tccagctttgagacgatggctgaggcaggctgttctgaagtgaaccttgcttcctttttg 420 || |||||||||| |||| |||||||| | ||||||||||||||||| || ||| | Sbjct: 630120 tctagctttgagattatggttgaggcagatttatctgaagtgaaccttgcctcatttctc 630179 Query: 421 ctctccttctcgatgaataggccagagagatcaaaccctgtggagaaagagatgatttca 480 | ||||| | ||||| | ||||||||||||||| || ||||||||||||| |||||| Sbjct: 630180 cattcctttacaatgaacatgccagagagatcaaatcccttggagaaagagataatttca 630239 Query: 481 aaggcatttagatttgtcaccgccaggggcttc 513 || ||||||| |||||||| | || ||||||| Sbjct: 630240 aaagcatttaagtttgtcactgacatgggcttc 630272 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 608 ggttctccccaggacctttccggaaccaggtggactcctttatcttctggatcgatatcc 667 |||||||| |||||||||||||||||||||| |||||||||||||||||||| || |||| Sbjct: 630367 ggttctcctcaggacctttccggaaccaggtagactcctttatcttctggattgaaatcc 630426 Query: 668 tcttgttaggatcagggtccatgatcttgtgcaaca 703 | || | || | |||||||||||||||| ||||| Sbjct: 630427 ttgtgcttgggttggggtccatgatcttgtacaaca 630462
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 218 bits (110), Expect = 2e-53 Identities = 322/393 (81%) Strand = Plus / Plus Query: 121 ccatgccaggcccatataatgtccttgagtgctggccggatgccctcctccaatagcttc 180 |||||| ||||| | | ||||||||| || |||||||||||||||||||||| ||||| Sbjct: 629880 ccatgctaggccaagacaatgtccttcagagctggccggatgccctcctccagtagctgt 629939 Query: 181 tggtactccagagaatcaccgntcgtttgtttcatctcaatgagatggtacgaggggctg 240 ||||||||| ||||| || | |||||||||||||| |||| ||| || || | | | Sbjct: 629940 cggtactccaatgaatcgccacttgtttgtttcatctcgatgatatgataggaagtggta 629999 Query: 241 atctcgaagatctccgagtcaaactgaagaacaccattcctgccttccttcctcacttgc 300 | ||| || ||||| |||||||||||||||||||||||| || ||||||||| ||||| Sbjct: 630000 acctcaaatatctctatgtcaaactgaagaacaccattccttccctccttcctcccttgc 630059 Query: 301 atcttgacgacaccattatccttcttcctcaccctgagattcagctgctttgcgacatct 360 ||||| || |||||||| || |||||||| ||||||||||| ||| |||||| |||||| Sbjct: 630060 atcttcactacaccattgtctttcttccttaccctgagatttagcgcctttgctacatct 630119 Query: 361 tccagctttgagacgatggctgaggcaggctgttctgaagtgaaccttgcttcctttttg 420 || |||||||||| |||| |||||||| | ||||||||||||||||| || ||| | Sbjct: 630120 tctagctttgagattatggttgaggcagatttatctgaagtgaaccttgcctcatttctc 630179 Query: 421 ctctccttctcgatgaataggccagagagatcaaaccctgtggagaaagagatgatttca 480 | ||||| | ||||| | ||||||||||||||| || ||||||||||||| |||||| Sbjct: 630180 cattcctttacaatgaacatgccagagagatcaaatcccttggagaaagagataatttca 630239 Query: 481 aaggcatttagatttgtcaccgccaggggcttc 513 || ||||||| |||||||| | || ||||||| Sbjct: 630240 aaagcatttaagtttgtcactgacatgggcttc 630272 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 608 ggttctccccaggacctttccggaaccaggtggactcctttatcttctggatcgatatcc 667 |||||||| |||||||||||||||||||||| |||||||||||||||||||| || |||| Sbjct: 630367 ggttctcctcaggacctttccggaaccaggtagactcctttatcttctggattgaaatcc 630426 Query: 668 tcttgttaggatcagggtccatgatcttgtgcaaca 703 | || | || | |||||||||||||||| ||||| Sbjct: 630427 ttgtgcttgggttggggtccatgatcttgtacaaca 630462
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 218 bits (110), Expect = 2e-53 Identities = 322/393 (81%) Strand = Plus / Minus Query: 121 ccatgccaggcccatataatgtccttgagtgctggccggatgccctcctccaatagcttc 180 |||||| ||||| | | ||||||||| || |||||||||||||||||||||| ||||| Sbjct: 113092 ccatgctaggccaagacaatgtccttcagagctggccggatgccctcctccagtagctgt 113033 Query: 181 tggtactccagagaatcaccgntcgtttgtttcatctcaatgagatggtacgaggggctg 240 ||||||||| ||||| || | |||||||||||||| |||| ||| || || | | | Sbjct: 113032 cggtactccaatgaatcgccacttgtttgtttcatctcgatgatatgataggaagtggta 112973 Query: 241 atctcgaagatctccgagtcaaactgaagaacaccattcctgccttccttcctcacttgc 300 | ||| || ||||| |||||||||||||||||||||||| || ||||||||| ||||| Sbjct: 112972 acctcaaatatctctatgtcaaactgaagaacaccattccttccctccttcctcccttgc 112913 Query: 301 atcttgacgacaccattatccttcttcctcaccctgagattcagctgctttgcgacatct 360 ||||| || |||||||| || |||||||| ||||||||||| ||| |||||| |||||| Sbjct: 112912 atcttcactacaccattgtctttcttccttaccctgagatttagcgcctttgctacatct 112853 Query: 361 tccagctttgagacgatggctgaggcaggctgttctgaagtgaaccttgcttcctttttg 420 || |||||||||| |||| |||||||| | ||||||||||||||||| || ||| | Sbjct: 112852 tctagctttgagattatggttgaggcagatttatctgaagtgaaccttgcctcatttctc 112793 Query: 421 ctctccttctcgatgaataggccagagagatcaaaccctgtggagaaagagatgatttca 480 | ||||| | ||||| | ||||||||||||||| || ||||||||||||| |||||| Sbjct: 112792 cattcctttacaatgaacatgccagagagatcaaatcccttggagaaagagataatttca 112733 Query: 481 aaggcatttagatttgtcaccgccaggggcttc 513 || ||||||| |||||||| | || ||||||| Sbjct: 112732 aaagcatttaagtttgtcactgacatgggcttc 112700 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 608 ggttctccccaggacctttccggaaccaggtggactcctttatcttctggatcgatatcc 667 |||||||| |||||||||||||||||||||| |||||||||||||||||||| || |||| Sbjct: 112605 ggttctcctcaggacctttccggaaccaggtagactcctttatcttctggattgaaatcc 112546 Query: 668 tcttgttaggatcagggtccatgatcttgtgcaaca 703 | || | || | |||||||||||||||| ||||| Sbjct: 112545 ttgtgcttgggttggggtccatgatcttgtacaaca 112510
>dbj|AK121773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092J11, full insert sequence Length = 2044 Score = 210 bits (106), Expect = 5e-51 Identities = 321/393 (81%) Strand = Plus / Minus Query: 121 ccatgccaggcccatataatgtccttgagtgctggccggatgccctcctccaatagcttc 180 |||||| ||||| | | ||||||||| || |||||||||||||||||||||| ||||| Sbjct: 1751 ccatgctaggccaagacaatgtccttcagagctggccggatgccctcctccagtagctgt 1692 Query: 181 tggtactccagagaatcaccgntcgtttgtttcatctcaatgagatggtacgaggggctg 240 ||||||||| ||||| || | |||||||||||||| |||| ||| || || | | | Sbjct: 1691 cggtactccaatgaatcgccacttgtttgtttcatctcgatgatatgataggaagtggta 1632 Query: 241 atctcgaagatctccgagtcaaactgaagaacaccattcctgccttccttcctcacttgc 300 | ||| || ||||| |||||||||||||||||||||||| || ||||||||| ||||| Sbjct: 1631 acctcaaatatctctatgtcaaactgaagaacaccattccttccctccttcctcccttgc 1572 Query: 301 atcttgacgacaccattatccttcttcctcaccctgagattcagctgctttgcgacatct 360 ||||| || |||||||| || |||||||| ||||||||||| ||| |||||| |||||| Sbjct: 1571 atcttcactacaccattgtctttcttccttaccctgagatttagcgcctttgctacatct 1512 Query: 361 tccagctttgagacgatggctgaggcaggctgttctgaagtgaaccttgcttcctttttg 420 || |||||||||| |||| |||||||| | ||||||||||||||||| || ||| | Sbjct: 1511 tctagctttgagattatggttgaggcagatttatctgaagtgaaccttgcctcatttctc 1452 Query: 421 ctctccttctcgatgaataggccagagagatcaaaccctgtggagaaagagatgatttca 480 | ||||| | ||||| | ||||||||||||||| || | ||||||||||| |||||| Sbjct: 1451 cattcctttacaatgaacatgccagagagatcaaatcccttagagaaagagataatttca 1392 Query: 481 aaggcatttagatttgtcaccgccaggggcttc 513 || ||||||| |||||||| | || ||||||| Sbjct: 1391 aaagcatttaagtttgtcactgacatgggcttc 1359 Score = 95.6 bits (48), Expect = 2e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 608 ggttctccccaggacctttccggaaccaggtggactcctttatcttctggatcgatatcc 667 |||||||| |||||||||||||||||||||| |||||||||||||||||||| || |||| Sbjct: 1264 ggttctcctcaggacctttccggaaccaggtagactcctttatcttctggattgaaatcc 1205 Query: 668 tcttgttaggatcagggtccatgatcttgtgcaaca 703 | || | || | |||||||||||||||| ||||| Sbjct: 1204 ttgtgcttgggttggggtccatgatcttgtacaaca 1169
>gb|AF004947.1|AF004947 Oryza sativa protein kinase mRNA, complete cds Length = 2055 Score = 182 bits (92), Expect = 1e-42 Identities = 215/256 (83%) Strand = Plus / Minus Query: 258 gtcaaactgaagaacaccattcctgccttccttcctcacttgcatcttgacgacaccatt 317 |||||||||||||||||||||||| |||||||||||| ||||||| || || |||||||| Sbjct: 1646 gtcaaactgaagaacaccattccttccttccttcctcccttgcattttcactacaccatt 1587 Query: 318 atccttcttcctcaccctgagattcagctgctttgcgacatcttccagctttgagacgat 377 || || ||||| ||||||||||| ||| |||||| |||||||| |||||||||| || Sbjct: 1586 gtcttttttccttaccctgagatttagcgcctttgcaacatcttctagctttgagattat 1527 Query: 378 ggctgaggcaggctgttctgaagtgaaccttgcttcctttttgctctccttctcgatgaa 437 || |||||||| | | ||||||||||||||| || ||| | | ||||| | ||||| Sbjct: 1526 ggttgaggcagatttatttgaagtgaaccttgcctcatttctccattcctttacaatgaa 1467 Query: 438 taggccagagagatcaaaccctgtggagaaagagatgatttcaaaggcatttagatttgt 497 | |||||||||||||||||| ||||||||||||| |||||||||||||||| ||||| Sbjct: 1466 catgccagagagatcaaaccccttggagaaagagataatttcaaaggcatttaagtttgt 1407 Query: 498 caccgccaggggcttc 513 ||| | || ||||||| Sbjct: 1406 cactgacatgggcttc 1391 Score = 85.7 bits (43), Expect = 2e-13 Identities = 76/87 (87%) Strand = Plus / Minus Query: 617 caggacctttccggaaccaggtggactcctttatcttctggatcgatatcctcttgttag 676 |||||||||||||||||||||| |||||||||||||||||||| || ||||| || | | Sbjct: 1287 caggacctttccggaaccaggtagactcctttatcttctggattgaaatccttgtgcttg 1228 Query: 677 gatcagggtccatgatcttgtgcaaca 703 | | |||||||||||||||| ||||| Sbjct: 1227 ggttggggtccatgatcttgtacaaca 1201 Score = 79.8 bits (40), Expect = 1e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 121 ccatgccaggcccatataatgtccttgagtgctggccggatgccctcctccaatagcttc 180 |||||||||||| | | ||||||||| || |||||||||||||||||||||| ||||| Sbjct: 1783 ccatgccaggccaagacaatgtccttcagagctggccggatgccctcctccagtagctgt 1724 Query: 181 tggtactccagagaatcaccgntcgtttgtttcatctcaatga 223 ||||||||| ||||| || | |||||||||||||| |||| Sbjct: 1723 cggtactccaatgaatcgccacttgtttgtttcatctcgatga 1681
>gb|AY110373.1| Zea mays CL46074_1 mRNA sequence Length = 661 Score = 93.7 bits (47), Expect = 7e-16 Identities = 94/110 (85%) Strand = Plus / Plus Query: 121 ccatgccaggcccatataatgtccttgagtgctggccggatgccctcctccaatagcttc 180 |||||||||||||| | |||||||| ||||||||||||||| ||| ||||| || ||| Sbjct: 271 ccatgccaggcccagactatgtccttcagtgctggccggatgtactcttccaacagtttc 330 Query: 181 tggtactccagagaatcaccgntcgtttgtttcatctcaatgagatggta 230 | |||||| || ||||||||| ||||||||||||||| ||||| ||||| Sbjct: 331 ttgtactcaagtgaatcaccgcccgtttgtttcatctcgatgaggtggta 380 Score = 61.9 bits (31), Expect = 3e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 301 atcttgacgacaccattatccttcttcctcaccctgagattcagctgctttgcgacatct 360 |||||||| |||||||| ||||||||||| ||||||| |||||| ||||| |||||| Sbjct: 451 atcttgacaacaccattgtccttcttccttaccctgaaattcagggcttttgcaacatct 510 Query: 361 tccagctttgagacgatgg 379 || ||||| |||| ||||| Sbjct: 511 tcaagcttcgagatgatgg 529
>emb|CR389834.1| Gallus gallus finished cDNA, clone ChEST266j3 Length = 920 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 110 aaccatcagccccatgccaggc 131 |||||||||||||||||||||| Sbjct: 49 aaccatcagccccatgccaggc 28
>gb|AC163618.4| Mus musculus BAC clone RP24-158G13 from chromosome 3, complete sequence Length = 198108 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 592 ctctccttcactgtaaggttc 612 ||||||||||||||||||||| Sbjct: 50607 ctctccttcactgtaaggttc 50627
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 aaaccctgtggagaaagagat 473 ||||||||||||||||||||| Sbjct: 70464 aaaccctgtggagaaagagat 70444
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 aaaccctgtggagaaagagat 473 ||||||||||||||||||||| Sbjct: 49488 aaaccctgtggagaaagagat 49468
>emb|AL358934.19| Human DNA sequence from clone RP11-459D20 on chromosome 9 Contains a transcription factor IIA small 12 kDa subunit (GTF2A2) pseudogene, complete sequence Length = 95922 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 cattcctgccttccttcctca 295 ||||||||||||||||||||| Sbjct: 83094 cattcctgccttccttcctca 83114
>emb|AL158049.11| Human DNA sequence from clone RP3-482C21 on chromosome 6 Contains the 3' end of the gene for a novel protein similar to integral inner nuclear membrane protein (MAN1) and the 3' end of the MLN gene for motilin and a CpG island, complete sequence Length = 51881 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 508 ggcttcctgacttcatggctg 528 ||||||||||||||||||||| Sbjct: 14054 ggcttcctgacttcatggctg 14034
>emb|AL157893.16| Human DNA sequence from clone RP11-322M19 on chromosome 10 Contains the gene for a novel protein highly similar to KIAA2020, two novel genes and a CpG island, complete sequence Length = 162286 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 ccattcctgccttccttcctc 294 ||||||||||||||||||||| Sbjct: 10523 ccattcctgccttccttcctc 10503
>gb|AY057407.1| Persea americana serine/threonine kinase mRNA, complete cds Length = 1622 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 361 tccagctttgagacgatggctgaggcaggctgttctgaagtgaaccttgcttc 413 |||| |||||||| |||||| ||||||||||| | |||| ||||| |||||| Sbjct: 1155 tccaactttgagatgatggccgaggcaggctgcttagaagcgaaccgtgcttc 1103
>emb|AL023582.1|HS496H19 Human DNA sequence from clone RP3-496H19 on chromosome 6q24 Contains the 3' end of the gene for p53-induced protein PIGPC1 (PERP), complete sequence Length = 66473 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 406 cttgcttcctttttgctctccttct 430 |||||||||||||||||||| |||| Sbjct: 34828 cttgcttcctttttgctctctttct 34804
>gb|AC091682.26| Mus musculus strain C57BL/6J chromosome 3 clone rp23-135c10, complete sequence Length = 206957 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 592 ctctccttcactgtaaggttc 612 ||||||||||||||||||||| Sbjct: 167401 ctctccttcactgtaaggttc 167421
>gb|AC024166.3|AC024166 Homo sapiens chromosome 3 clone RP11-429F16 map 3p, complete sequence Length = 174868 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 caccattcctgccttccttcc 292 ||||||||||||||||||||| Sbjct: 31708 caccattcctgccttccttcc 31728
>gb|AC083855.3| Homo sapiens chromosome 3 clone RP11-622I12 map 3p, complete sequence Length = 190861 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 caccattcctgccttccttcc 292 ||||||||||||||||||||| Sbjct: 15518 caccattcctgccttccttcc 15538
>gb|AC104772.3| Homo sapiens BAC clone RP11-3I22 from 2, complete sequence Length = 106526 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 accattcctgccttccttcct 293 ||||||||||||||||||||| Sbjct: 51283 accattcctgccttccttcct 51263
>emb|AL844546.8| Mouse DNA sequence from clone RP23-243I3 on chromosome 2, complete sequence Length = 170475 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 514 ctgacttcatggctgttcttcctgc 538 ||||| ||||||||||||||||||| Sbjct: 165817 ctgacatcatggctgttcttcctgc 165793
>gb|AC066580.4| Homo sapiens chromosome 3 clone RP11-109J15 map 3p, complete sequence Length = 149252 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 caccattcctgccttccttcc 292 ||||||||||||||||||||| Sbjct: 142757 caccattcctgccttccttcc 142777
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cttaaaaatgtaaaaaatgc 57 |||||||||||||||||||| Sbjct: 1653276 cttaaaaatgtaaaaaatgc 1653295
>ref|NM_113313.2| Arabidopsis thaliana unknown protein AT3G24080 mRNA, complete cds Length = 2163 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 cattatccttcttcctcacc 333 |||||||||||||||||||| Sbjct: 912 cattatccttcttcctcacc 893
>gb|AC157554.7| Mus musculus chromosome 15, clone RP24-324P21, complete sequence Length = 217353 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 cttgcttcctttttgctctc 425 |||||||||||||||||||| Sbjct: 154810 cttgcttcctttttgctctc 154829
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 tcgaagatctccgagtcaaa 263 |||||||||||||||||||| Sbjct: 682967 tcgaagatctccgagtcaaa 682986
>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome Length = 1860355 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 gtggtggtattctcatttgg 587 |||||||||||||||||||| Sbjct: 1816015 gtggtggtattctcatttgg 1816034
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome Length = 1836467 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 gtggtggtattctcatttgg 587 |||||||||||||||||||| Sbjct: 1792140 gtggtggtattctcatttgg 1792159
>ref|XM_454832.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E19569g predicted mRNA Length = 1722 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tagatttgtcaccgccaggg 508 |||||||||||||||||||| Sbjct: 130 tagatttgtcaccgccaggg 111
>gb|AC123854.3| Mus musculus BAC clone RP23-328J8 from chromosome 1, complete sequence Length = 187979 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 gcttaaaaatgtaaaaaatg 56 |||||||||||||||||||| Sbjct: 164825 gcttaaaaatgtaaaaaatg 164844
>emb|CR450767.13| Zebrafish DNA sequence from clone DKEY-5D4 in linkage group 8, complete sequence Length = 66979 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 ttcctgccttccttcctcacttgc 300 ||||| |||||||||||||||||| Sbjct: 66942 ttccttccttccttcctcacttgc 66965
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 ctcgagcttaaaaatgtaaa 51 |||||||||||||||||||| Sbjct: 4338809 ctcgagcttaaaaatgtaaa 4338790
>emb|AL163532.8| Human DNA sequence from clone RP11-226D23 on chromosome 13, complete sequence Length = 20988 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 agtcaaactgaagaacacca 276 |||||||||||||||||||| Sbjct: 12754 agtcaaactgaagaacacca 12773
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 tagatttgtcaccgccaggg 508 |||||||||||||||||||| Sbjct: 1732243 tagatttgtcaccgccaggg 1732262
>emb|AL139079.2|CJ11168X6 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 6/6 Length = 155932 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cttaaaaatgtaaaaaatgc 57 |||||||||||||||||||| Sbjct: 26561 cttaaaaatgtaaaaaatgc 26580
>emb|CR847543.13| Zebrafish DNA sequence from clone DKEY-183P4 in linkage group 8, complete sequence Length = 207382 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 ttcctgccttccttcctcacttgc 300 ||||| |||||||||||||||||| Sbjct: 1963 ttccttccttccttcctcacttgc 1986
>emb|BX957361.10| Zebrafish DNA sequence from clone DKEY-269O24 in linkage group 4 Contains two novel genes and a CpG island, complete sequence Length = 116445 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 aaaccctgtggagaaagaga 472 |||||||||||||||||||| Sbjct: 61501 aaaccctgtggagaaagaga 61482
>gb|AC116363.2| Homo sapiens chromosome 5 clone RP11-758E17, complete sequence Length = 194619 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 gagaaagagatgatttcaaa 482 |||||||||||||||||||| Sbjct: 1834 gagaaagagatgatttcaaa 1815
>gb|AC072041.21| Homo sapiens 3 BAC RP11-450A18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111809 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 gctacacttgatgctcctgc 108 |||||||||||||||||||| Sbjct: 23628 gctacacttgatgctcctgc 23609
>gb|AC109494.3| Homo sapiens chromosome 5 clone RP11-783J1, complete sequence Length = 172180 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 gagaaagagatgatttcaaa 482 |||||||||||||||||||| Sbjct: 118464 gagaaagagatgatttcaaa 118483
>gb|AC109443.2| Homo sapiens chromosome 5 clone CTD-2070B15, complete sequence Length = 123037 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgccaggcccatataatgtc 143 |||||||||||||||||||| Sbjct: 122754 tgccaggcccatataatgtc 122735
>gb|AC072051.8| Homo sapiens chromosome , clone RP11-79D21, complete sequence Length = 157284 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 cattcctgccttccttcctc 294 |||||||||||||||||||| Sbjct: 109445 cattcctgccttccttcctc 109464
>gb|AC092018.2| Homo sapiens chromosome 1 clone RP11-543G21, complete sequence Length = 173135 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 atctaaagctacacttgatg 101 |||||||||||||||||||| Sbjct: 86856 atctaaagctacacttgatg 86875
>gb|AC010547.9| Homo sapiens chromosome 16 clone RP11-510M2, complete sequence Length = 183228 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 328 ctcaccctgagattcagctgcttt 351 |||||||||||||||| ||||||| Sbjct: 10764 ctcaccctgagattcaactgcttt 10741
>gb|AC008842.6| Homo sapiens chromosome 5 clone CTD-2155H8, complete sequence Length = 125238 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 gagaaagagatgatttcaaa 482 |||||||||||||||||||| Sbjct: 984 gagaaagagatgatttcaaa 1003
>dbj|AK029744.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930524K04 product:hypothetical Zn-dependent exopeptidases structure containing protein, full insert sequence Length = 3779 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tggagaaagagatgatttca 480 |||||||||||||||||||| Sbjct: 371 tggagaaagagatgatttca 390
>gb|AC008931.8| Homo sapiens chromosome 5 clone CTD-2294L1, complete sequence Length = 140394 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 tgtggagaaagagatgattt 478 |||||||||||||||||||| Sbjct: 93828 tgtggagaaagagatgattt 93847
>dbj|AK040259.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430081C19 product:hypothetical Zn-dependent exopeptidases structure containing protein, full insert sequence Length = 2226 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tggagaaagagatgatttca 480 |||||||||||||||||||| Sbjct: 274 tggagaaagagatgatttca 293
>ref|NM_178755.1| Mus musculus ATP/GTP binding protein-like 2 (Agbl2), mRNA Length = 3779 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tggagaaagagatgatttca 480 |||||||||||||||||||| Sbjct: 371 tggagaaagagatgatttca 390
>dbj|AK079691.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430016M13 product:hypothetical protein, full insert sequence Length = 2227 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tggagaaagagatgatttca 480 |||||||||||||||||||| Sbjct: 275 tggagaaagagatgatttca 294
>gb|AC021082.4|AC021082 Homo sapiens chromosome 5 clone CTC-431D1, complete sequence Length = 118645 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 tgccaggcccatataatgtc 143 |||||||||||||||||||| Sbjct: 58404 tgccaggcccatataatgtc 58423
>dbj|AK030182.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933413C13 product:similar to CDNA: FLJ23598 FIS, CLONE LNG15381 [Homo sapiens], full insert sequence Length = 2764 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tggagaaagagatgatttca 480 |||||||||||||||||||| Sbjct: 385 tggagaaagagatgatttca 404
>dbj|AK030138.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932702M20 product:weakly similar to SD05477P [Drosophila melanogaster], full insert sequence Length = 3841 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tggagaaagagatgatttca 480 |||||||||||||||||||| Sbjct: 359 tggagaaagagatgatttca 378
>dbj|AK029932.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932408C11 product:similar to CDNA: FLJ23598 FIS, CLONE LNG15381 [Homo sapiens], full insert sequence Length = 3463 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tggagaaagagatgatttca 480 |||||||||||||||||||| Sbjct: 339 tggagaaagagatgatttca 358
>gb|AC108134.3| Homo sapiens chromosome 16 clone RP11-473M20, complete sequence Length = 180354 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 tcagccccatgccaggccca 134 |||||||||||||||||||| Sbjct: 86478 tcagccccatgccaggccca 86459
>gb|AC023468.6| Homo sapiens BAC clone RP11-432O12 from 2, complete sequence Length = 170871 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 tttggcagtctctccttcac 602 |||||||||||||||||||| Sbjct: 55537 tttggcagtctctccttcac 55556
>gb|AC025275.4|AC025275 Homo sapiens chromosome 16 clone CTC-502C3, complete sequence Length = 94850 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 ccattcctgccttccttcct 293 |||||||||||||||||||| Sbjct: 23562 ccattcctgccttccttcct 23581
>gb|AC010165.10|AC010165 Homo sapiens chromosome 5 clone RP11-17J3, complete sequence Length = 168909 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 gagaaagagatgatttcaaa 482 |||||||||||||||||||| Sbjct: 111866 gagaaagagatgatttcaaa 111847
>gb|AC068193.7| Homo sapiens BAC clone RP11-103P16 from 2, complete sequence Length = 170059 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 agatgatttcaaaggcattt 489 |||||||||||||||||||| Sbjct: 120459 agatgatttcaaaggcattt 120440
>ref|XM_345401.2| PREDICTED: Rattus norvegicus similar to CG32627-PB (predicted) (LOC366124), mRNA Length = 2604 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tggagaaagagatgatttca 480 |||||||||||||||||||| Sbjct: 255 tggagaaagagatgatttca 274
>gb|AC073934.1|AC073934 Human Chromosome 7 clone SCb-354C16, complete sequence Length = 131165 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 aaggcatttagatttgtcac 500 |||||||||||||||||||| Sbjct: 33956 aaggcatttagatttgtcac 33975
>dbj|AP001297.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F14O13 Length = 106203 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 cattatccttcttcctcacc 333 |||||||||||||||||||| Sbjct: 99057 cattatccttcttcctcacc 99076
>gb|AC009181.5|AC009181 Homo sapiens clone RP11-224A1 from 7q31, complete sequence Length = 159027 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 aaggcatttagatttgtcac 500 |||||||||||||||||||| Sbjct: 9735 aaggcatttagatttgtcac 9716
>dbj|AB085690.1| Kluyveromyces lactis gene for putative delta 8-sphingolipid desaturase, complete cds Length = 2852 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tagatttgtcaccgccaggg 508 |||||||||||||||||||| Sbjct: 1137 tagatttgtcaccgccaggg 1118
>dbj|AB047066.1| Xenopus laevis mRNA for type XVIII collagen alpha1 chain, complete cds Length = 5598 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 aaccctgtggagaaagagat 473 |||||||||||||||||||| Sbjct: 878 aaccctgtggagaaagagat 897
>emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequence between D16S3070 and D16S3275, containing Familial Mediterranean Fever gene disease Length = 239566 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 tcagccccatgccaggccca 134 |||||||||||||||||||| Sbjct: 34164 tcagccccatgccaggccca 34145
>gb|AC132567.3| Mus musculus BAC clone RP24-559G13 from 3, complete sequence Length = 154142 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 ttcctgccttccttcctcac 296 |||||||||||||||||||| Sbjct: 126981 ttcctgccttccttcctcac 126962
>emb|AL714026.13| Mouse DNA sequence from clone RP23-322I11 on chromosome 2, complete sequence Length = 134955 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tggagaaagagatgatttca 480 |||||||||||||||||||| Sbjct: 70023 tggagaaagagatgatttca 70042 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,723,057 Number of Sequences: 3902068 Number of extensions: 8723057 Number of successful extensions: 180897 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 180433 Number of HSP's gapped (non-prelim): 447 length of query: 704 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 681 effective length of database: 17,143,297,704 effective search space: 11674585736424 effective search space used: 11674585736424 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)