Clone Name | rbasdc15 |
---|---|
Clone Library Name | barley_pub |
>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC| 2.7.11.1) (Serine/threonine-protein kinase ATPK10) (SOS2-like protein kinase PKS3) (SOS-interacting protein 2) (SNF1-related kinase 3.1) Length = 421 Score = 157 bits (397), Expect = 3e-38 Identities = 86/191 (45%), Positives = 126/191 (65%) Frame = -2 Query: 712 KIMDPDPNKRISIQKIKESTWFRKGPGENLTVKERLPNENTTTDAVPTLGVRRRKNSHEV 533 +I+DP+PN R+S +KI +S+WFRKG E VKE + E T DA N+ Sbjct: 245 RILDPNPNTRVSTEKIMKSSWFRKGLQEE--VKESV-EEETEVDA------EAEGNASAE 295 Query: 532 RKPLAVTNLNAFEIISFSTGFDLSGLFIEKESKKEARFTSEQPASAIVSKLEDVAKQLNL 353 ++ NLNAFEIIS STGFDLSGLF + E K+E RFTS + AS I KL ++ K L + Sbjct: 296 KEKKRCINLNAFEIISLSTGFDLSGLFEKGEEKEEMRFTSNREASEITEKLVEIGKDLKM 355 Query: 352 RVRKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIR 173 +VRKK++ + +V+ V+ ++E+FEI+PSYH++ +K++ GD+ EY+++++E IR Sbjct: 356 KVRKKEH---EWRVKMSAEATVV--EAEVFEIAPSYHMVVLKKSGGDTAEYKRVMKESIR 410 Query: 172 PALKDIIWAWH 140 PAL D + AWH Sbjct: 411 PALIDFVLAWH 421
>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)| Length = 449 Score = 120 bits (301), Expect = 4e-27 Identities = 70/193 (36%), Positives = 110/193 (56%), Gaps = 1/193 (0%) Frame = -2 Query: 712 KIMDPDPNKRISIQKIKESTWFRKGPGENLTVKERLPNENTTTDAVPTLGVRRRKNSHEV 533 +I+DP+P RI+I +I E WF+KG + E+ DA R Sbjct: 254 RILDPNPTTRITISQILEDPWFKKGYKPPV-FDEKYETSFDDVDAAFGDSEDRHVKEETE 312 Query: 532 RKPLAVTNLNAFEIISFSTGFDLSGLF-IEKESKKEARFTSEQPASAIVSKLEDVAKQLN 356 +P T++NAFE+IS + +L LF +KE K+E RFTS+ P I++K+E+ AK L Sbjct: 313 DQP---TSMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLG 369 Query: 355 LRVRKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGI 176 ++KK N ++M+ K GR G L +E+F+++PS H++E+K+ GD+LE+QK + Sbjct: 370 FDIQKK-NYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRT-L 427 Query: 175 RPALKDIIWAWHG 137 LKD++W G Sbjct: 428 STQLKDVVWKCDG 440
>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC| 2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related kinase 3.16) Length = 444 Score = 88.2 bits (217), Expect = 2e-17 Identities = 61/193 (31%), Positives = 104/193 (53%), Gaps = 7/193 (3%) Frame = -2 Query: 712 KIMDPDPNKRISIQKIKESTWFRKGPGENLTVKERLPNENTTTDA--VPTLGVRRRKNSH 539 +++DP+P RI++ IK S WF+ ++ + +T DA + LG K S Sbjct: 254 RMLDPNPVTRITVVGIKASEWFKLEYIPSIPDDDDEEEVDTDDDAFSIQELGSEEGKGSD 313 Query: 538 EVRKPLAVTNLNAFEIISFSTGFDLSGLFIEKE-SKKEARFTSEQPASAIVSKLEDVAKQ 362 + T +NAF++I S+ DLSG F ++ S++ RFTS A ++ K+E + Sbjct: 314 ------SPTIINAFQLIGMSSFLDLSGFFEQENVSERRIRFTSNSSAKDLLEKIETAVTE 367 Query: 361 LNLRVRKKDNGVVKMQVRKEGRNGV----LQFDSEIFEISPSYHLIEMKQTSGDSLEYQK 194 + V+KK K++V++E RN L +E+FEI PS +++E++++ GDS Y++ Sbjct: 368 MGFSVQKKH---AKLRVKQEERNQKGQVGLSVTAEVFEIKPSLNVVELRKSYGDSCLYRQ 424 Query: 193 LLEEGIRPALKDI 155 L E LKD+ Sbjct: 425 LYER----LLKDV 433
>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC| 2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY SENSITIVE 2 protein) Length = 446 Score = 84.0 bits (206), Expect = 4e-16 Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 5/193 (2%) Frame = -2 Query: 712 KIMDPDPNKRISIQKIKESTWFRKGPGENLTVKERLPNENTTTDAVPTL--GVRRRKNSH 539 +I+DP+P RI IQ IK+ WFR N E D + + G+ + Sbjct: 243 RILDPNPKTRIQIQGIKKDPWFRL----NYVPIRAREEEEVNLDDIRAVFDGIEGSYVAE 298 Query: 538 EV-RKPLAVTNLNAFEIISFSTGFDLSGLFIEKES--KKEARFTSEQPASAIVSKLEDVA 368 V R +NAFE+I+ S G +LS LF ++ K++ RF S + S I++ +E VA Sbjct: 299 NVERNDEGPLMMNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVA 358 Query: 367 KQLNLRVRKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLL 188 + + + N +++ + G L EI+E++PS ++++++ +G++LEY K Sbjct: 359 NSMGFKSHTR-NFKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKFY 417 Query: 187 EEGIRPALKDIIW 149 ++ + L++IIW Sbjct: 418 KK-LCSKLENIIW 429
>CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein kinase 11 (EC| 2.7.11.1) (SOS2-like protein kinase PKS5) (SOS-interacting protein 4) (SNF1-related kinase 3.22) Length = 435 Score = 68.6 bits (166), Expect = 2e-11 Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 2/185 (1%) Frame = -2 Query: 712 KIMDPDPNKRISIQKIKESTWFRKGPGENLTVKERLPNENTTTDAVPTLGVRRRKNSHEV 533 +++D +P RI+I +I + WF +G + + + + ++ Sbjct: 256 RLLDINPETRITIDEILKDPWFVRGGFKQIKFHDDEIEDQKVESSLE------------- 302 Query: 532 RKPLAVTNLNAFEIISFSTGFDLSGLF--IEKESKKEARFTSEQPASAIVSKLEDVAKQL 359 AV +LNAF++IS+S+G DLSGLF S + RF SE+ + ++E A++ Sbjct: 303 ----AVKSLNAFDLISYSSGLDLSGLFAGCSNSSGESERFLSEKSPEMLAEEVEGFAREE 358 Query: 358 NLRVRKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEG 179 NLR++KK ++ EG+NG I ++ ++E ++ GD Y+++ Sbjct: 359 NLRMKKKKEEEYGFEM--EGQNGKFGIGICISRLNDLLVVVEARRRGGDGDCYKEMWNGK 416 Query: 178 IRPAL 164 +R L Sbjct: 417 LRVQL 421
>SAPK3_ORYSA (Q75V63) Serine/threonine-protein kinase SAPK3 (EC 2.7.11.1)| (Osmotic stress/abscisic acid-activated protein kinase 3) (Protein kinase REK) Length = 334 Score = 35.8 bits (81), Expect = 0.13 Identities = 18/47 (38%), Positives = 30/47 (63%) Frame = -2 Query: 712 KIMDPDPNKRISIQKIKESTWFRKGPGENLTVKERLPNENTTTDAVP 572 +I DP+KRI+I +IK+ TWF K + ++ +E+ ++ TDA P Sbjct: 240 QIFVADPSKRITIPEIKKHTWFLKNLPKEISEREKADYKD--TDAAP 284
>MFD_BORBU (O51568) Transcription-repair coupling factor (EC 3.6.1.-) (TRCF)| (ATP-dependent helicase mfd) Length = 1125 Score = 32.7 bits (73), Expect = 1.1 Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 6/163 (3%) Frame = -2 Query: 652 WFRKGPGENLTVKE----RLPNENTTTDAVPTLGVRRRKNSHEVRKPLAVTNLNAFEIIS 485 +++K PG +TV + ++P++NT + + N+ ++ K L ++ Sbjct: 111 FYKKNPGIYITVLKSLLSKIPDKNTLLKNIYKIEKNTNINTADIEKTLITLGYEKTLRVT 170 Query: 484 FSTGFDLSGLFIEKESKKEARFTSEQPASAIVS--KLEDVAKQLNLRVRKKDNGVVKMQV 311 F + G I+ F + P ++ K+E++ K L K DN +++ Q+ Sbjct: 171 IPGEFTVKGEIIDIYP-----FGEQNPIRIALNFDKIEEIKKFNPLTQLKHDNEILEFQI 225 Query: 310 RKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEE 182 + EI I +T S+EY+K+LEE Sbjct: 226 LPKK------------EIIWDDKTINTLKTKIKSVEYKKILEE 256
>STK11_XENLA (Q91604) Serine/threonine-protein kinase 11 (EC 2.7.11.1)| (Serine/threonine-protein kinase XEEK1) (Egg and embryo kinase 1) Length = 432 Score = 32.0 bits (71), Expect = 1.9 Identities = 12/23 (52%), Positives = 18/23 (78%) Frame = -2 Query: 709 IMDPDPNKRISIQKIKESTWFRK 641 +++ DP KR SIQ+I++ WFRK Sbjct: 292 MLEYDPAKRFSIQQIRQHNWFRK 314
>CI076_HUMAN (Q9H9A7) Protein C9orf76| Length = 625 Score = 31.2 bits (69), Expect = 3.3 Identities = 17/45 (37%), Positives = 26/45 (57%) Frame = -2 Query: 286 LQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKDII 152 + F EI + + EMKQ+ D L+YQK L EG++ +D+I Sbjct: 543 VDFVDEILTSLIGFSVPEMKQSKKDPLQYQKFL-EGLQKCQRDLI 586
>DACF_BACSU (P38422) Penicillin-binding protein dacF precursor| (D-alanyl-D-alanine carboxypeptidase) (EC 3.4.16.4) (DD-peptidase) (DD-carboxypeptidase) Length = 389 Score = 31.2 bits (69), Expect = 3.3 Identities = 21/76 (27%), Positives = 37/76 (48%) Frame = -2 Query: 451 IEKESKKEARFTSEQPASAIVSKLEDVAKQLNLRVRKKDNGVVKMQVRKEGRNGVLQFDS 272 ++K +K T+ +P S + K ED+ + ++ KDN +Q +E VL+ D Sbjct: 297 VKKGKQKFIELTTSEPISILTKKGEDM-NDVKKEIKMKDNISAPIQKGQELGTLVLKKDG 355 Query: 271 EIFEISPSYHLIEMKQ 224 E+ SP +MK+ Sbjct: 356 EVLAESPVAAKEDMKK 371
>IOD3_RANCA (P49898) Type III iodothyronine deiodinase (EC 1.97.1.11) (Type-III| 5'deiodinase) (DIOIII) (Type 3 DI) (5DIII) Length = 269 Score = 30.8 bits (68), Expect = 4.3 Identities = 25/53 (47%), Positives = 30/53 (56%) Frame = +2 Query: 545 VLPAPHTKCWNSICGGILIWQSLLHCKVLPRTFPEPGGLLYLLDRYPLVRIRV 703 +LPAPHT C L+ Q L C +LPR F LL+LLD +P VR RV Sbjct: 1 MLPAPHTCC-------RLLQQLLACCLLLPR-FLLTVLLLWLLD-FPCVRRRV 44
>CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)| (ATP-dependent helicase CHD9) (CHD-9) (Peroxisomal proliferator-activated receptor A-interacting complex 320 kDa protein) (PPAR-alpha-interacting complex protein 320 kDa) Length = 2885 Score = 30.0 bits (66), Expect = 7.3 Identities = 17/68 (25%), Positives = 32/68 (47%) Frame = -2 Query: 412 EQPASAIVSKLEDVAKQLNLRVRKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIE 233 E SA +SK++ ++ V+ KD G +K+ +K+G FD E + +L Sbjct: 2325 EHEQSAQMSKVKKHVREKEFTVKIKDEGGLKLTFQKQGLAQKRPFDGEDGALGQQQYLTR 2384 Query: 232 MKQTSGDS 209 +++ S Sbjct: 2385 LRELQSTS 2392
>CHK1_YEAST (P38147) Serine/threonine-protein kinase CHK1 (EC 2.7.11.1)| (Checkpoint kinase 1) Length = 527 Score = 30.0 bits (66), Expect = 7.3 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = -2 Query: 712 KIMDPDPNKRISIQKIKESTW 650 KI+ PDPNKR++++ +K W Sbjct: 260 KILQPDPNKRVTLKALKLHPW 280
>SN1L2_CHICK (Q9IA88) Serine/threonine-protein kinase SNF1-like kinase 2 (EC| 2.7.11.1) (Qin-induced kinase) Length = 798 Score = 30.0 bits (66), Expect = 7.3 Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 10/117 (8%) Frame = -2 Query: 697 DPNKRISIQKIKESTWFRKGPG----ENLTVKERLPNEN------TTTDAVPTLGVRRRK 548 DP KRI+I +IK+ W + P ++L+ + N N + TLG+ R++ Sbjct: 261 DPTKRITISQIKQHKWMQADPSLRQQQSLSFSMQNYNSNLGDYNEQVLGIMQTLGIDRQR 320 Query: 547 NSHEVRKPLAVTNLNAFEIISFSTGFDLSGLFIEKESKKEARFTSEQPASAIVSKLE 377 ++ ++ N F I + L + S + A ++P S+ +S E Sbjct: 321 TVESLQN----SSYNHFAAIYYLLLERLKEYRSSQLSSRPATGRQQRPRSSEISNAE 373
>NASP_HUMAN (P49321) Nuclear autoantigenic sperm protein (NASP)| Length = 788 Score = 30.0 bits (66), Expect = 7.3 Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 24/175 (13%) Frame = -2 Query: 634 GENLTVKERLPNENTTTDAVPTLGVRRRKNSHEVRKPLAVTNLN-AFEIISFSTGFDLSG 458 GE E EN T+ +P V K+ E + + NL A++++ DL+ Sbjct: 474 GEETEGSEEDDKENDKTEEMPNDSVLENKSLQENEEE-EIGNLELAWDML------DLAK 526 Query: 457 LFIEKESKKEARFTSEQP----------ASAIVSKLEDVAKQLNLR---VRKKDNGVVKM 317 + +++ KEA+ + Q + V +E+ LNL+ + D + + Sbjct: 527 IIFKRQETKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQSCLNLQEQYLEAHDRLLAET 586 Query: 316 QVRKEGRNGV-LQFDSEIFEISPSYHLIE---------MKQTSGDSLEYQKLLEE 182 + G Q+D + + S S +IE +K+ G S EY+K +EE Sbjct: 587 HYQLGLAYGYNSQYDEAVAQFSKSIEVIENRMAVLNEQVKEAEGSSAEYKKEIEE 641
>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non| muscle) Length = 2116 Score = 29.6 bits (65), Expect = 9.6 Identities = 35/171 (20%), Positives = 74/171 (43%), Gaps = 7/171 (4%) Frame = -2 Query: 646 RKGPGENLTVKERLPNEN----TTTDAVPTLGVRRRKNSHEVRKPLAVTNLNAFEIISFS 479 +K E+ K+RL +EN DA R K+ + K L T + + Sbjct: 1775 KKKLNESERAKKRLESENEDFLAKLDAEVKNRSRAEKDRKKYEKDLKDTKYKLNDEAATK 1834 Query: 478 TGFDLSGLFIEKE-SKKEARFTSEQPASAIVSKLEDVAKQL--NLRVRKKDNGVVKMQVR 308 T ++ +E + + ++ EQ + K + + NLR + +D G +KM++ Sbjct: 1835 TQTEIGAAKLEDQIDELRSKLEQEQAKATQADKSKKTLEGEIDNLRAQIEDEGKIKMRLE 1894 Query: 307 KEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKDI 155 KE R + E+ E+ + E + + ++ + ++L+E + A +++ Sbjct: 1895 KEKR----ALEGELEELRETVE--EAEDSKSEAEQSKRLVELELEDARRNL 1939 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105,392,623 Number of Sequences: 219361 Number of extensions: 2321383 Number of successful extensions: 6175 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 5946 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6163 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7252940416 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)