ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasdc15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein ki... 157 3e-38
2CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) 120 4e-27
3CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein ki... 88 2e-17
4CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein ki... 84 4e-16
5CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein ki... 69 2e-11
6SAPK3_ORYSA (Q75V63) Serine/threonine-protein kinase SAPK3 (EC 2... 36 0.13
7MFD_BORBU (O51568) Transcription-repair coupling factor (EC 3.6.... 33 1.1
8STK11_XENLA (Q91604) Serine/threonine-protein kinase 11 (EC 2.7.... 32 1.9
9CI076_HUMAN (Q9H9A7) Protein C9orf76 31 3.3
10DACF_BACSU (P38422) Penicillin-binding protein dacF precursor (D... 31 3.3
11IOD3_RANCA (P49898) Type III iodothyronine deiodinase (EC 1.97.1... 31 4.3
12CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 ... 30 7.3
13CHK1_YEAST (P38147) Serine/threonine-protein kinase CHK1 (EC 2.7... 30 7.3
14SN1L2_CHICK (Q9IA88) Serine/threonine-protein kinase SNF1-like k... 30 7.3
15NASP_HUMAN (P49321) Nuclear autoantigenic sperm protein (NASP) 30 7.3
16MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II ... 30 9.6

>CPK15_ARATH (P92937) CBL-interacting serine/threonine-protein kinase 15 (EC|
           2.7.11.1) (Serine/threonine-protein kinase ATPK10)
           (SOS2-like protein kinase PKS3) (SOS-interacting protein
           2) (SNF1-related kinase 3.1)
          Length = 421

 Score =  157 bits (397), Expect = 3e-38
 Identities = 86/191 (45%), Positives = 126/191 (65%)
 Frame = -2

Query: 712 KIMDPDPNKRISIQKIKESTWFRKGPGENLTVKERLPNENTTTDAVPTLGVRRRKNSHEV 533
           +I+DP+PN R+S +KI +S+WFRKG  E   VKE +  E T  DA          N+   
Sbjct: 245 RILDPNPNTRVSTEKIMKSSWFRKGLQEE--VKESV-EEETEVDA------EAEGNASAE 295

Query: 532 RKPLAVTNLNAFEIISFSTGFDLSGLFIEKESKKEARFTSEQPASAIVSKLEDVAKQLNL 353
           ++     NLNAFEIIS STGFDLSGLF + E K+E RFTS + AS I  KL ++ K L +
Sbjct: 296 KEKKRCINLNAFEIISLSTGFDLSGLFEKGEEKEEMRFTSNREASEITEKLVEIGKDLKM 355

Query: 352 RVRKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIR 173
           +VRKK++   + +V+      V+  ++E+FEI+PSYH++ +K++ GD+ EY+++++E IR
Sbjct: 356 KVRKKEH---EWRVKMSAEATVV--EAEVFEIAPSYHMVVLKKSGGDTAEYKRVMKESIR 410

Query: 172 PALKDIIWAWH 140
           PAL D + AWH
Sbjct: 411 PALIDFVLAWH 421



to top

>CIPK1_ORYSA (Q6X4A2) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1)|
          Length = 449

 Score =  120 bits (301), Expect = 4e-27
 Identities = 70/193 (36%), Positives = 110/193 (56%), Gaps = 1/193 (0%)
 Frame = -2

Query: 712 KIMDPDPNKRISIQKIKESTWFRKGPGENLTVKERLPNENTTTDAVPTLGVRRRKNSHEV 533
           +I+DP+P  RI+I +I E  WF+KG    +   E+        DA       R       
Sbjct: 254 RILDPNPTTRITISQILEDPWFKKGYKPPV-FDEKYETSFDDVDAAFGDSEDRHVKEETE 312

Query: 532 RKPLAVTNLNAFEIISFSTGFDLSGLF-IEKESKKEARFTSEQPASAIVSKLEDVAKQLN 356
            +P   T++NAFE+IS +   +L  LF  +KE K+E RFTS+ P   I++K+E+ AK L 
Sbjct: 313 DQP---TSMNAFELISLNQALNLDNLFEAKKEYKRETRFTSQCPPKEIITKIEEAAKPLG 369

Query: 355 LRVRKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGI 176
             ++KK N  ++M+  K GR G L   +E+F+++PS H++E+K+  GD+LE+QK     +
Sbjct: 370 FDIQKK-NYKMRMENLKAGRKGNLNVATEVFQVAPSLHVVELKKAKGDTLEFQKFYRT-L 427

Query: 175 RPALKDIIWAWHG 137
              LKD++W   G
Sbjct: 428 STQLKDVVWKCDG 440



to top

>CIPK1_ARATH (Q8RWC9) CBL-interacting serine/threonine-protein kinase 1 (EC|
           2.7.11.1) (SOS2-like protein kinase PKS13) (SNF1-related
           kinase 3.16)
          Length = 444

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 61/193 (31%), Positives = 104/193 (53%), Gaps = 7/193 (3%)
 Frame = -2

Query: 712 KIMDPDPNKRISIQKIKESTWFRKGPGENLTVKERLPNENTTTDA--VPTLGVRRRKNSH 539
           +++DP+P  RI++  IK S WF+     ++   +     +T  DA  +  LG    K S 
Sbjct: 254 RMLDPNPVTRITVVGIKASEWFKLEYIPSIPDDDDEEEVDTDDDAFSIQELGSEEGKGSD 313

Query: 538 EVRKPLAVTNLNAFEIISFSTGFDLSGLFIEKE-SKKEARFTSEQPASAIVSKLEDVAKQ 362
                 + T +NAF++I  S+  DLSG F ++  S++  RFTS   A  ++ K+E    +
Sbjct: 314 ------SPTIINAFQLIGMSSFLDLSGFFEQENVSERRIRFTSNSSAKDLLEKIETAVTE 367

Query: 361 LNLRVRKKDNGVVKMQVRKEGRNGV----LQFDSEIFEISPSYHLIEMKQTSGDSLEYQK 194
           +   V+KK     K++V++E RN      L   +E+FEI PS +++E++++ GDS  Y++
Sbjct: 368 MGFSVQKKH---AKLRVKQEERNQKGQVGLSVTAEVFEIKPSLNVVELRKSYGDSCLYRQ 424

Query: 193 LLEEGIRPALKDI 155
           L E      LKD+
Sbjct: 425 LYER----LLKDV 433



to top

>CPK24_ARATH (Q9LDI3) CBL-interacting serine/threonine-protein kinase 24 (EC|
           2.7.11.1) (SNF1-related kinase 3.11) (SALT OVERLY
           SENSITIVE 2 protein)
          Length = 446

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 5/193 (2%)
 Frame = -2

Query: 712 KIMDPDPNKRISIQKIKESTWFRKGPGENLTVKERLPNENTTTDAVPTL--GVRRRKNSH 539
           +I+DP+P  RI IQ IK+  WFR     N         E    D +  +  G+     + 
Sbjct: 243 RILDPNPKTRIQIQGIKKDPWFRL----NYVPIRAREEEEVNLDDIRAVFDGIEGSYVAE 298

Query: 538 EV-RKPLAVTNLNAFEIISFSTGFDLSGLFIEKES--KKEARFTSEQPASAIVSKLEDVA 368
            V R       +NAFE+I+ S G +LS LF  ++   K++ RF S +  S I++ +E VA
Sbjct: 299 NVERNDEGPLMMNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVA 358

Query: 367 KQLNLRVRKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLL 188
             +  +   + N   +++     + G L    EI+E++PS  ++++++ +G++LEY K  
Sbjct: 359 NSMGFKSHTR-NFKTRLEGLSSIKAGQLAVVIEIYEVAPSLFMVDVRKAAGETLEYHKFY 417

Query: 187 EEGIRPALKDIIW 149
           ++ +   L++IIW
Sbjct: 418 KK-LCSKLENIIW 429



to top

>CPK11_ARATH (O22932) CBL-interacting serine/threonine-protein kinase 11 (EC|
           2.7.11.1) (SOS2-like protein kinase PKS5)
           (SOS-interacting protein 4) (SNF1-related kinase 3.22)
          Length = 435

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 2/185 (1%)
 Frame = -2

Query: 712 KIMDPDPNKRISIQKIKESTWFRKGPGENLTVKERLPNENTTTDAVPTLGVRRRKNSHEV 533
           +++D +P  RI+I +I +  WF +G  + +   +    +     ++              
Sbjct: 256 RLLDINPETRITIDEILKDPWFVRGGFKQIKFHDDEIEDQKVESSLE------------- 302

Query: 532 RKPLAVTNLNAFEIISFSTGFDLSGLF--IEKESKKEARFTSEQPASAIVSKLEDVAKQL 359
               AV +LNAF++IS+S+G DLSGLF      S +  RF SE+    +  ++E  A++ 
Sbjct: 303 ----AVKSLNAFDLISYSSGLDLSGLFAGCSNSSGESERFLSEKSPEMLAEEVEGFAREE 358

Query: 358 NLRVRKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEG 179
           NLR++KK       ++  EG+NG       I  ++    ++E ++  GD   Y+++    
Sbjct: 359 NLRMKKKKEEEYGFEM--EGQNGKFGIGICISRLNDLLVVVEARRRGGDGDCYKEMWNGK 416

Query: 178 IRPAL 164
           +R  L
Sbjct: 417 LRVQL 421



to top

>SAPK3_ORYSA (Q75V63) Serine/threonine-protein kinase SAPK3 (EC 2.7.11.1)|
           (Osmotic stress/abscisic acid-activated protein kinase
           3) (Protein kinase REK)
          Length = 334

 Score = 35.8 bits (81), Expect = 0.13
 Identities = 18/47 (38%), Positives = 30/47 (63%)
 Frame = -2

Query: 712 KIMDPDPNKRISIQKIKESTWFRKGPGENLTVKERLPNENTTTDAVP 572
           +I   DP+KRI+I +IK+ TWF K   + ++ +E+   ++  TDA P
Sbjct: 240 QIFVADPSKRITIPEIKKHTWFLKNLPKEISEREKADYKD--TDAAP 284



to top

>MFD_BORBU (O51568) Transcription-repair coupling factor (EC 3.6.1.-) (TRCF)|
           (ATP-dependent helicase mfd)
          Length = 1125

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 6/163 (3%)
 Frame = -2

Query: 652 WFRKGPGENLTVKE----RLPNENTTTDAVPTLGVRRRKNSHEVRKPLAVTNLNAFEIIS 485
           +++K PG  +TV +    ++P++NT    +  +      N+ ++ K L          ++
Sbjct: 111 FYKKNPGIYITVLKSLLSKIPDKNTLLKNIYKIEKNTNINTADIEKTLITLGYEKTLRVT 170

Query: 484 FSTGFDLSGLFIEKESKKEARFTSEQPASAIVS--KLEDVAKQLNLRVRKKDNGVVKMQV 311
               F + G  I+        F  + P    ++  K+E++ K   L   K DN +++ Q+
Sbjct: 171 IPGEFTVKGEIIDIYP-----FGEQNPIRIALNFDKIEEIKKFNPLTQLKHDNEILEFQI 225

Query: 310 RKEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEE 182
             +             EI      I   +T   S+EY+K+LEE
Sbjct: 226 LPKK------------EIIWDDKTINTLKTKIKSVEYKKILEE 256



to top

>STK11_XENLA (Q91604) Serine/threonine-protein kinase 11 (EC 2.7.11.1)|
           (Serine/threonine-protein kinase XEEK1) (Egg and embryo
           kinase 1)
          Length = 432

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -2

Query: 709 IMDPDPNKRISIQKIKESTWFRK 641
           +++ DP KR SIQ+I++  WFRK
Sbjct: 292 MLEYDPAKRFSIQQIRQHNWFRK 314



to top

>CI076_HUMAN (Q9H9A7) Protein C9orf76|
          Length = 625

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -2

Query: 286 LQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKDII 152
           + F  EI      + + EMKQ+  D L+YQK L EG++   +D+I
Sbjct: 543 VDFVDEILTSLIGFSVPEMKQSKKDPLQYQKFL-EGLQKCQRDLI 586



to top

>DACF_BACSU (P38422) Penicillin-binding protein dacF precursor|
           (D-alanyl-D-alanine carboxypeptidase) (EC 3.4.16.4)
           (DD-peptidase) (DD-carboxypeptidase)
          Length = 389

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 21/76 (27%), Positives = 37/76 (48%)
 Frame = -2

Query: 451 IEKESKKEARFTSEQPASAIVSKLEDVAKQLNLRVRKKDNGVVKMQVRKEGRNGVLQFDS 272
           ++K  +K    T+ +P S +  K ED+   +   ++ KDN    +Q  +E    VL+ D 
Sbjct: 297 VKKGKQKFIELTTSEPISILTKKGEDM-NDVKKEIKMKDNISAPIQKGQELGTLVLKKDG 355

Query: 271 EIFEISPSYHLIEMKQ 224
           E+   SP     +MK+
Sbjct: 356 EVLAESPVAAKEDMKK 371



to top

>IOD3_RANCA (P49898) Type III iodothyronine deiodinase (EC 1.97.1.11) (Type-III|
           5'deiodinase) (DIOIII) (Type 3 DI) (5DIII)
          Length = 269

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 25/53 (47%), Positives = 30/53 (56%)
 Frame = +2

Query: 545 VLPAPHTKCWNSICGGILIWQSLLHCKVLPRTFPEPGGLLYLLDRYPLVRIRV 703
           +LPAPHT C        L+ Q L  C +LPR F     LL+LLD +P VR RV
Sbjct: 1   MLPAPHTCC-------RLLQQLLACCLLLPR-FLLTVLLLWLLD-FPCVRRRV 44



to top

>CHD9_MOUSE (Q8BYH8) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD9) (CHD-9) (Peroxisomal
            proliferator-activated receptor A-interacting complex 320
            kDa protein) (PPAR-alpha-interacting complex protein 320
            kDa)
          Length = 2885

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = -2

Query: 412  EQPASAIVSKLEDVAKQLNLRVRKKDNGVVKMQVRKEGRNGVLQFDSEIFEISPSYHLIE 233
            E   SA +SK++   ++    V+ KD G +K+  +K+G      FD E   +    +L  
Sbjct: 2325 EHEQSAQMSKVKKHVREKEFTVKIKDEGGLKLTFQKQGLAQKRPFDGEDGALGQQQYLTR 2384

Query: 232  MKQTSGDS 209
            +++    S
Sbjct: 2385 LRELQSTS 2392



to top

>CHK1_YEAST (P38147) Serine/threonine-protein kinase CHK1 (EC 2.7.11.1)|
           (Checkpoint kinase 1)
          Length = 527

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -2

Query: 712 KIMDPDPNKRISIQKIKESTW 650
           KI+ PDPNKR++++ +K   W
Sbjct: 260 KILQPDPNKRVTLKALKLHPW 280



to top

>SN1L2_CHICK (Q9IA88) Serine/threonine-protein kinase SNF1-like kinase 2 (EC|
           2.7.11.1) (Qin-induced kinase)
          Length = 798

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 10/117 (8%)
 Frame = -2

Query: 697 DPNKRISIQKIKESTWFRKGPG----ENLTVKERLPNEN------TTTDAVPTLGVRRRK 548
           DP KRI+I +IK+  W +  P     ++L+   +  N N           + TLG+ R++
Sbjct: 261 DPTKRITISQIKQHKWMQADPSLRQQQSLSFSMQNYNSNLGDYNEQVLGIMQTLGIDRQR 320

Query: 547 NSHEVRKPLAVTNLNAFEIISFSTGFDLSGLFIEKESKKEARFTSEQPASAIVSKLE 377
               ++     ++ N F  I +     L      + S + A    ++P S+ +S  E
Sbjct: 321 TVESLQN----SSYNHFAAIYYLLLERLKEYRSSQLSSRPATGRQQRPRSSEISNAE 373



to top

>NASP_HUMAN (P49321) Nuclear autoantigenic sperm protein (NASP)|
          Length = 788

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 24/175 (13%)
 Frame = -2

Query: 634 GENLTVKERLPNENTTTDAVPTLGVRRRKNSHEVRKPLAVTNLN-AFEIISFSTGFDLSG 458
           GE     E    EN  T+ +P   V   K+  E  +   + NL  A++++      DL+ 
Sbjct: 474 GEETEGSEEDDKENDKTEEMPNDSVLENKSLQENEEE-EIGNLELAWDML------DLAK 526

Query: 457 LFIEKESKKEARFTSEQP----------ASAIVSKLEDVAKQLNLR---VRKKDNGVVKM 317
           +  +++  KEA+  + Q           +   V  +E+    LNL+   +   D  + + 
Sbjct: 527 IIFKRQETKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQSCLNLQEQYLEAHDRLLAET 586

Query: 316 QVRKEGRNGV-LQFDSEIFEISPSYHLIE---------MKQTSGDSLEYQKLLEE 182
             +     G   Q+D  + + S S  +IE         +K+  G S EY+K +EE
Sbjct: 587 HYQLGLAYGYNSQYDEAVAQFSKSIEVIENRMAVLNEQVKEAEGSSAEYKKEIEE 641



to top

>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non|
            muscle)
          Length = 2116

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 35/171 (20%), Positives = 74/171 (43%), Gaps = 7/171 (4%)
 Frame = -2

Query: 646  RKGPGENLTVKERLPNEN----TTTDAVPTLGVRRRKNSHEVRKPLAVTNLNAFEIISFS 479
            +K   E+   K+RL +EN       DA      R  K+  +  K L  T     +  +  
Sbjct: 1775 KKKLNESERAKKRLESENEDFLAKLDAEVKNRSRAEKDRKKYEKDLKDTKYKLNDEAATK 1834

Query: 478  TGFDLSGLFIEKE-SKKEARFTSEQPASAIVSKLEDVAKQL--NLRVRKKDNGVVKMQVR 308
            T  ++    +E +  +  ++   EQ  +    K +   +    NLR + +D G +KM++ 
Sbjct: 1835 TQTEIGAAKLEDQIDELRSKLEQEQAKATQADKSKKTLEGEIDNLRAQIEDEGKIKMRLE 1894

Query: 307  KEGRNGVLQFDSEIFEISPSYHLIEMKQTSGDSLEYQKLLEEGIRPALKDI 155
            KE R      + E+ E+  +    E + +  ++ + ++L+E  +  A +++
Sbjct: 1895 KEKR----ALEGELEELRETVE--EAEDSKSEAEQSKRLVELELEDARRNL 1939


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,392,623
Number of Sequences: 219361
Number of extensions: 2321383
Number of successful extensions: 6175
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6163
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7252940416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top