Clone Name | rbasdc09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CLPX1_WOLSU (Q7MAS4) ATP-dependent Clp protease ATP-binding subu... | 31 | 3.9 | 2 | DNAJ_RHILE (O33529) Chaperone protein dnaJ (Fragment) | 30 | 6.6 |
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>CLPX1_WOLSU (Q7MAS4) ATP-dependent Clp protease ATP-binding subunit clpX 1| Length = 417 Score = 30.8 bits (68), Expect = 3.9 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +2 Query: 89 AQISISPARPRAITEMELNTKTGYK*LRTPHAHINSDLMHLLP 217 A++S P AI E+ + KTG + LR + DLM+ LP Sbjct: 341 AELSFEPEALEAIAELAIKRKTGARGLRAIIEEVTLDLMYDLP 383
>DNAJ_RHILE (O33529) Chaperone protein dnaJ (Fragment)| Length = 234 Score = 30.0 bits (66), Expect = 6.6 Identities = 18/64 (28%), Positives = 23/64 (35%) Frame = -1 Query: 430 LTCPSQGKKGSKPA*ERHSCKTCCSPPYSETNNSEASRCYRCPGADSERLVPPDQVPKCD 251 +TC G+KP + +C TC S CP + PD PKC Sbjct: 147 ITCDVCTGSGAKPGTQPKNCGTCQGTGRVRAAQGFFSIERTCPTCHGRGQIIPDPCPKCH 206 Query: 250 IHGR 239 GR Sbjct: 207 GQGR 210 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,467,727 Number of Sequences: 219361 Number of extensions: 2275729 Number of successful extensions: 5412 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 5245 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5409 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)