ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasdb06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AJ290421.1|HVU290421 Hordeum vulgare mRNA for BAX inhibitor ... 765 0.0
2ref|XM_463955.1| Oryza sativa (japonica cultivar-group), mRNA 416 e-113
3ref|XM_463954.1| Oryza sativa (japonica cultivar-group), mRNA 416 e-113
4ref|XM_507433.1| PREDICTED Oryza sativa (japonica cultivar-group... 416 e-113
5ref|XM_506699.2| PREDICTED Oryza sativa (japonica cultivar-group... 416 e-113
6dbj|AB025926.3| Oryza sativa BI-1 mRNA for Bax inhibitor-1, comp... 416 e-113
7dbj|AK101060.1| Oryza sativa (japonica cultivar-group) cDNA clon... 416 e-113
8dbj|AK061564.1| Oryza sativa (japonica cultivar-group) cDNA clon... 416 e-113
9dbj|AK061953.1| Oryza sativa (japonica cultivar-group) cDNA clon... 408 e-111
10gb|AY105656.1| Zea mays PCO153521 mRNA sequence 289 3e-75
11emb|AJ278816.1|HVU278816 Hordeum vulgare partial mRNA for putati... 281 8e-73
12gb|AY107681.1| Zea mays PCO116018 mRNA sequence 248 1e-62
13dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 206 4e-50
14dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic D... 206 4e-50
15gb|BT018201.1| Zea mays clone EL01N0559D10.c mRNA sequence 182 6e-43
16gb|AF453320.1| Brassica oleracea bax inhibitor-like protein (BI1... 46 0.086
17gb|AC183495.1| Brassica oleracea Contig A, complete sequence 46 0.086
18gb|AF390555.1| Brassica napus Bax inhibitor 1 (BI-1) mRNA, compl... 46 0.086
19gb|AY380778.1| Lycopersicon esculentum Bax inhibitor (BI-1) mRNA... 44 0.34
20gb|AC011447.7| Homo sapiens chromosome 19 clone CTC-260E6, compl... 44 0.34
21gb|AC008554.8| Homo sapiens chromosome 19 clone CTC-513N18, comp... 44 0.34
22gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.4
23gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.4
24emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.4
25gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.4
26gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 5.3
27ref|XM_957333.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.3
28ref|XM_328615.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.3
29ref|XM_570465.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 5.3
30gb|AC073530.18| Homo sapiens 12 BAC RP11-123O10 (Roswell Park Ca... 40 5.3
31gb|AC129217.3| Mus musculus BAC clone RP24-458M20 from chromosom... 40 5.3
32gb|AC073153.16| Mus musculus Strain C57BL6/J chromosome 19 BAC, ... 40 5.3
33gb|DQ397554.1| Cenarchaeum symbiosum clone C08F03, complete sequ... 40 5.3
34dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
35gb|AC026359.25| Homo sapiens 3 BAC RP11-462A6 (Roswell Park Canc... 40 5.3
36dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
37emb|BX004819.11| Zebrafish DNA sequence from clone CH211-208B16 ... 40 5.3
38emb|CR361554.35| Zebrafish DNA sequence from clone CH211-222L15 ... 40 5.3

>emb|AJ290421.1|HVU290421 Hordeum vulgare mRNA for BAX inhibitor 1 (pBI-1 gene)
          Length = 744

 Score =  765 bits (386), Expect = 0.0
 Identities = 395/399 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   cgacttgtcgcctgcgttcttgagcatgatgatgaggactnggacgagnacggcaacaaa 60
           |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 711 cgacttgtcgcctgcgttcttgagcatgatgatgaggactcggacgaggacggcaacaaa 652

                                                                       
Query: 61  gtcggtgaagagggtgagggcgtgcttgatgtagtccatgtcgccatggtgcgccctctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gtcggtgaagagggtgagggcgtgcttgatgtagtccatgtcgccatggtgcgccctctc 592

                                                                       
Query: 121 gatgatctcctgcgtgtcgtacaccatgtaccccaggaagatcaacaggccaaagtaaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gatgatctcctgcgtgtcgtacaccatgtaccccaggaagatcaacaggccaaagtaaac 532

                                                                       
Query: 181 ctcaaacatgaagctgccagaggagtggccaaagatggacgtggcaaactgcagccagag 240
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 531 ctcaaacatgaagctgccagaggagtggccaaagatggacgtgacaaactgcagccagag 472

                                                                       
Query: 241 caggatcgacaggccanacgagagcaggccaccgaggtacaggtactccctgcgcttggc 300
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 caggatcgacaggccagacgagagcaggccaccgaggtacaggtactccctgcgcttggc 412

                                                                       
Query: 301 gatgatggcggcgccagagaagcacccaaaggcgatggcggttccgacaaaccctgtcac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gatgatggcggcgccagagaagcacccaaaggcgatggcggttccgacaaaccctgtcac 352

                                                  
Query: 361 gaggatgcttgggtcaaagtctatggcaagctcaatcag 399
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gaggatgcttgggtcaaagtctatggcaagctcaatcag 313



to top

>ref|XM_463955.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 555

 Score =  416 bits (210), Expect = e-113
 Identities = 336/379 (88%)
 Strand = Plus / Minus

                                                                       
Query: 14  gcgttcttgagcatgatgatgaggactnggacgagnacggcaacaaagtcggtgaagagg 73
           ||||||||||||||||||| |||||   |||| || ||||| || ||||| |||||||||
Sbjct: 512 gcgttcttgagcatgatgacgaggatccggacaaggacggccacgaagtcagtgaagagg 453

                                                                       
Query: 74  gtgagggcgtgcttgatgtagtccatgtcgccatggtgcgccctctcgatgatctcctgc 133
           ||||| ||||||||||||||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 452 gtgagtgcgtgcttgatgtagtccatgtcaccgtggtgagccctctcgatgatctcctgc 393

                                                                       
Query: 134 gtgtcgtacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 193
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gtgtcatacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 333

                                                                       
Query: 194 ctgccagaggagtggccaaagatggacgtggcaaactgcagccagagcaggatcgacagg 253
           ||||| | |||||||||||||||||| | |||||||||||||||||||||||| || |||
Sbjct: 332 ctgccggtggagtggccaaagatggatgcggcaaactgcagccagagcaggatggagagg 273

                                                                       
Query: 254 ccanacgagagcaggccaccgaggtacaggtactccctgcgcttggcgatgatggcggcg 313
           ||| | |||||||  ||||| ||||| ||||||||||| |||||||| | |||||| |||
Sbjct: 272 ccagaagagagcaaaccaccaaggtagaggtactccctacgcttggcaacgatggcagcg 213

                                                                       
Query: 314 ccagagaagcacccaaaggcgatggcggttccgacaaaccctgtcacgaggatgcttggg 373
           | || |||||||||||| || ||||| ||||| |||||  |||| ||||| ||||||| |
Sbjct: 212 caagtgaagcacccaaatgcaatggcagttccaacaaatgctgttacgagaatgcttgag 153

                              
Query: 374 tcaaagtctatggcaagct 392
           ||||||||||  |||||||
Sbjct: 152 tcaaagtctacagcaagct 134



to top

>ref|XM_463954.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1071

 Score =  416 bits (210), Expect = e-113
 Identities = 336/379 (88%)
 Strand = Plus / Minus

                                                                       
Query: 14  gcgttcttgagcatgatgatgaggactnggacgagnacggcaacaaagtcggtgaagagg 73
           ||||||||||||||||||| |||||   |||| || ||||| || ||||| |||||||||
Sbjct: 735 gcgttcttgagcatgatgacgaggatccggacaaggacggccacgaagtcagtgaagagg 676

                                                                       
Query: 74  gtgagggcgtgcttgatgtagtccatgtcgccatggtgcgccctctcgatgatctcctgc 133
           ||||| ||||||||||||||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 675 gtgagtgcgtgcttgatgtagtccatgtcaccgtggtgagccctctcgatgatctcctgc 616

                                                                       
Query: 134 gtgtcgtacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 193
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gtgtcatacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 556

                                                                       
Query: 194 ctgccagaggagtggccaaagatggacgtggcaaactgcagccagagcaggatcgacagg 253
           ||||| | |||||||||||||||||| | |||||||||||||||||||||||| || |||
Sbjct: 555 ctgccggtggagtggccaaagatggatgcggcaaactgcagccagagcaggatggagagg 496

                                                                       
Query: 254 ccanacgagagcaggccaccgaggtacaggtactccctgcgcttggcgatgatggcggcg 313
           ||| | |||||||  ||||| ||||| ||||||||||| |||||||| | |||||| |||
Sbjct: 495 ccagaagagagcaaaccaccaaggtagaggtactccctacgcttggcaacgatggcagcg 436

                                                                       
Query: 314 ccagagaagcacccaaaggcgatggcggttccgacaaaccctgtcacgaggatgcttggg 373
           | || |||||||||||| || ||||| ||||| |||||  |||| ||||| ||||||| |
Sbjct: 435 caagtgaagcacccaaatgcaatggcagttccaacaaatgctgttacgagaatgcttgag 376

                              
Query: 374 tcaaagtctatggcaagct 392
           ||||||||||  |||||||
Sbjct: 375 tcaaagtctacagcaagct 357



to top

>ref|XM_507433.1| PREDICTED Oryza sativa (japonica cultivar-group), P0482F12.1-1 mRNA
          Length = 1168

 Score =  416 bits (210), Expect = e-113
 Identities = 336/379 (88%)
 Strand = Plus / Minus

                                                                       
Query: 14  gcgttcttgagcatgatgatgaggactnggacgagnacggcaacaaagtcggtgaagagg 73
           ||||||||||||||||||| |||||   |||| || ||||| || ||||| |||||||||
Sbjct: 846 gcgttcttgagcatgatgacgaggatccggacaaggacggccacgaagtcagtgaagagg 787

                                                                       
Query: 74  gtgagggcgtgcttgatgtagtccatgtcgccatggtgcgccctctcgatgatctcctgc 133
           ||||| ||||||||||||||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 786 gtgagtgcgtgcttgatgtagtccatgtcaccgtggtgagccctctcgatgatctcctgc 727

                                                                       
Query: 134 gtgtcgtacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 193
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gtgtcatacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 667

                                                                       
Query: 194 ctgccagaggagtggccaaagatggacgtggcaaactgcagccagagcaggatcgacagg 253
           ||||| | |||||||||||||||||| | |||||||||||||||||||||||| || |||
Sbjct: 666 ctgccggtggagtggccaaagatggatgcggcaaactgcagccagagcaggatggagagg 607

                                                                       
Query: 254 ccanacgagagcaggccaccgaggtacaggtactccctgcgcttggcgatgatggcggcg 313
           ||| | |||||||  ||||| ||||| ||||||||||| |||||||| | |||||| |||
Sbjct: 606 ccagaagagagcaaaccaccaaggtagaggtactccctacgcttggcaacgatggcagcg 547

                                                                       
Query: 314 ccagagaagcacccaaaggcgatggcggttccgacaaaccctgtcacgaggatgcttggg 373
           | || |||||||||||| || ||||| ||||| |||||  |||| ||||| ||||||| |
Sbjct: 546 caagtgaagcacccaaatgcaatggcagttccaacaaatgctgttacgagaatgcttgag 487

                              
Query: 374 tcaaagtctatggcaagct 392
           ||||||||||  |||||||
Sbjct: 486 tcaaagtctacagcaagct 468



to top

>ref|XM_506699.2| PREDICTED Oryza sativa (japonica cultivar-group), P0482F12.1-1 mRNA
          Length = 1193

 Score =  416 bits (210), Expect = e-113
 Identities = 336/379 (88%)
 Strand = Plus / Minus

                                                                       
Query: 14  gcgttcttgagcatgatgatgaggactnggacgagnacggcaacaaagtcggtgaagagg 73
           ||||||||||||||||||| |||||   |||| || ||||| || ||||| |||||||||
Sbjct: 857 gcgttcttgagcatgatgacgaggatccggacaaggacggccacgaagtcagtgaagagg 798

                                                                       
Query: 74  gtgagggcgtgcttgatgtagtccatgtcgccatggtgcgccctctcgatgatctcctgc 133
           ||||| ||||||||||||||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 797 gtgagtgcgtgcttgatgtagtccatgtcaccgtggtgagccctctcgatgatctcctgc 738

                                                                       
Query: 134 gtgtcgtacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 193
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gtgtcatacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 678

                                                                       
Query: 194 ctgccagaggagtggccaaagatggacgtggcaaactgcagccagagcaggatcgacagg 253
           ||||| | |||||||||||||||||| | |||||||||||||||||||||||| || |||
Sbjct: 677 ctgccggtggagtggccaaagatggatgcggcaaactgcagccagagcaggatggagagg 618

                                                                       
Query: 254 ccanacgagagcaggccaccgaggtacaggtactccctgcgcttggcgatgatggcggcg 313
           ||| | |||||||  ||||| ||||| ||||||||||| |||||||| | |||||| |||
Sbjct: 617 ccagaagagagcaaaccaccaaggtagaggtactccctacgcttggcaacgatggcagcg 558

                                                                       
Query: 314 ccagagaagcacccaaaggcgatggcggttccgacaaaccctgtcacgaggatgcttggg 373
           | || |||||||||||| || ||||| ||||| |||||  |||| ||||| ||||||| |
Sbjct: 557 caagtgaagcacccaaatgcaatggcagttccaacaaatgctgttacgagaatgcttgag 498

                              
Query: 374 tcaaagtctatggcaagct 392
           ||||||||||  |||||||
Sbjct: 497 tcaaagtctacagcaagct 479



to top

>dbj|AB025926.3| Oryza sativa BI-1 mRNA for Bax inhibitor-1, complete cds
          Length = 1181

 Score =  416 bits (210), Expect = e-113
 Identities = 336/379 (88%)
 Strand = Plus / Minus

                                                                       
Query: 14  gcgttcttgagcatgatgatgaggactnggacgagnacggcaacaaagtcggtgaagagg 73
           ||||||||||||||||||| |||||   |||| || ||||| || ||||| |||||||||
Sbjct: 832 gcgttcttgagcatgatgacgaggatccggacaaggacggccacgaagtcagtgaagagg 773

                                                                       
Query: 74  gtgagggcgtgcttgatgtagtccatgtcgccatggtgcgccctctcgatgatctcctgc 133
           ||||| ||||||||||||||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 772 gtgagtgcgtgcttgatgtagtccatgtcaccgtggtgagccctctcgatgatctcctgc 713

                                                                       
Query: 134 gtgtcgtacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 193
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gtgtcatacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 653

                                                                       
Query: 194 ctgccagaggagtggccaaagatggacgtggcaaactgcagccagagcaggatcgacagg 253
           ||||| | |||||||||||||||||| | |||||||||||||||||||||||| || |||
Sbjct: 652 ctgccggtggagtggccaaagatggatgcggcaaactgcagccagagcaggatggagagg 593

                                                                       
Query: 254 ccanacgagagcaggccaccgaggtacaggtactccctgcgcttggcgatgatggcggcg 313
           ||| | |||||||  ||||| ||||| ||||||||||| |||||||| | |||||| |||
Sbjct: 592 ccagaagagagcaaaccaccaaggtagaggtactccctacgcttggcaacgatggcagcg 533

                                                                       
Query: 314 ccagagaagcacccaaaggcgatggcggttccgacaaaccctgtcacgaggatgcttggg 373
           | || |||||||||||| || ||||| ||||| |||||  |||| ||||| ||||||| |
Sbjct: 532 caagtgaagcacccaaatgcaatggcagttccaacaaatgctgttacgagaatgcttgag 473

                              
Query: 374 tcaaagtctatggcaagct 392
           ||||||||||  |||||||
Sbjct: 472 tcaaagtctacagcaagct 454



to top

>dbj|AK101060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022C21, full
           insert sequence
          Length = 1193

 Score =  416 bits (210), Expect = e-113
 Identities = 336/379 (88%)
 Strand = Plus / Minus

                                                                       
Query: 14  gcgttcttgagcatgatgatgaggactnggacgagnacggcaacaaagtcggtgaagagg 73
           ||||||||||||||||||| |||||   |||| || ||||| || ||||| |||||||||
Sbjct: 857 gcgttcttgagcatgatgacgaggatccggacaaggacggccacgaagtcagtgaagagg 798

                                                                       
Query: 74  gtgagggcgtgcttgatgtagtccatgtcgccatggtgcgccctctcgatgatctcctgc 133
           ||||| ||||||||||||||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 797 gtgagtgcgtgcttgatgtagtccatgtcaccgtggtgagccctctcgatgatctcctgc 738

                                                                       
Query: 134 gtgtcgtacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 193
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gtgtcatacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 678

                                                                       
Query: 194 ctgccagaggagtggccaaagatggacgtggcaaactgcagccagagcaggatcgacagg 253
           ||||| | |||||||||||||||||| | |||||||||||||||||||||||| || |||
Sbjct: 677 ctgccggtggagtggccaaagatggatgcggcaaactgcagccagagcaggatggagagg 618

                                                                       
Query: 254 ccanacgagagcaggccaccgaggtacaggtactccctgcgcttggcgatgatggcggcg 313
           ||| | |||||||  ||||| ||||| ||||||||||| |||||||| | |||||| |||
Sbjct: 617 ccagaagagagcaaaccaccaaggtagaggtactccctacgcttggcaacgatggcagcg 558

                                                                       
Query: 314 ccagagaagcacccaaaggcgatggcggttccgacaaaccctgtcacgaggatgcttggg 373
           | || |||||||||||| || ||||| ||||| |||||  |||| ||||| ||||||| |
Sbjct: 557 caagtgaagcacccaaatgcaatggcagttccaacaaatgctgttacgagaatgcttgag 498

                              
Query: 374 tcaaagtctatggcaagct 392
           ||||||||||  |||||||
Sbjct: 497 tcaaagtctacagcaagct 479



to top

>dbj|AK061564.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E05, full
           insert sequence
          Length = 1071

 Score =  416 bits (210), Expect = e-113
 Identities = 336/379 (88%)
 Strand = Plus / Minus

                                                                       
Query: 14  gcgttcttgagcatgatgatgaggactnggacgagnacggcaacaaagtcggtgaagagg 73
           ||||||||||||||||||| |||||   |||| || ||||| || ||||| |||||||||
Sbjct: 735 gcgttcttgagcatgatgacgaggatccggacaaggacggccacgaagtcagtgaagagg 676

                                                                       
Query: 74  gtgagggcgtgcttgatgtagtccatgtcgccatggtgcgccctctcgatgatctcctgc 133
           ||||| ||||||||||||||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 675 gtgagtgcgtgcttgatgtagtccatgtcaccgtggtgagccctctcgatgatctcctgc 616

                                                                       
Query: 134 gtgtcgtacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 193
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gtgtcatacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 556

                                                                       
Query: 194 ctgccagaggagtggccaaagatggacgtggcaaactgcagccagagcaggatcgacagg 253
           ||||| | |||||||||||||||||| | |||||||||||||||||||||||| || |||
Sbjct: 555 ctgccggtggagtggccaaagatggatgcggcaaactgcagccagagcaggatggagagg 496

                                                                       
Query: 254 ccanacgagagcaggccaccgaggtacaggtactccctgcgcttggcgatgatggcggcg 313
           ||| | |||||||  ||||| ||||| ||||||||||| |||||||| | |||||| |||
Sbjct: 495 ccagaagagagcaaaccaccaaggtagaggtactccctacgcttggcaacgatggcagcg 436

                                                                       
Query: 314 ccagagaagcacccaaaggcgatggcggttccgacaaaccctgtcacgaggatgcttggg 373
           | || |||||||||||| || ||||| ||||| |||||  |||| ||||| ||||||| |
Sbjct: 435 caagtgaagcacccaaatgcaatggcagttccaacaaatgctgttacgagaatgcttgag 376

                              
Query: 374 tcaaagtctatggcaagct 392
           ||||||||||  |||||||
Sbjct: 375 tcaaagtctacagcaagct 357



to top

>dbj|AK061953.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F03, full
           insert sequence
          Length = 1168

 Score =  408 bits (206), Expect = e-111
 Identities = 335/379 (88%)
 Strand = Plus / Minus

                                                                       
Query: 14  gcgttcttgagcatgatgatgaggactnggacgagnacggcaacaaagtcggtgaagagg 73
           ||||||||||||||||||| |||||   |||| || ||||| || ||||| |||||||||
Sbjct: 846 gcgttcttgagcatgatgacgaggatccggacaaggacggccacgaagtcagtgaagagg 787

                                                                       
Query: 74  gtgagggcgtgcttgatgtagtccatgtcgccatggtgcgccctctcgatgatctcctgc 133
           ||||| ||||||||||||||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 786 gtgagtgcgtgcttgatgtagtccatgtcaccgtggtgagccctctcgatgatctcctgc 727

                                                                       
Query: 134 gtgtcgtacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 193
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gtgtcatacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaag 667

                                                                       
Query: 194 ctgccagaggagtggccaaagatggacgtggcaaactgcagccagagcaggatcgacagg 253
           ||||| | |||||||||||||||||| | |||||||||||||||||||||||| || |||
Sbjct: 666 ctgccggtggagtggccaaagatggatgcggcaaactgcagccagagcaggatggagagg 607

                                                                       
Query: 254 ccanacgagagcaggccaccgaggtacaggtactccctgcgcttggcgatgatggcggcg 313
           ||| | |||||||  ||||| ||||| ||||||||||| |||||||| | |||||| |||
Sbjct: 606 ccagaagagagcaaaccaccaaggtagaggtactccctacgcttggcaacgatggcagcg 547

                                                                       
Query: 314 ccagagaagcacccaaaggcgatggcggttccgacaaaccctgtcacgaggatgcttggg 373
           | || |||||||||||| || ||||| ||||| |||||  |||| ||||| ||| ||| |
Sbjct: 546 caagtgaagcacccaaatgcaatggcagttccaacaaatgctgttacgagaatgtttgag 487

                              
Query: 374 tcaaagtctatggcaagct 392
           ||||||||||  |||||||
Sbjct: 486 tcaaagtctacagcaagct 468



to top

>gb|AY105656.1| Zea mays PCO153521 mRNA sequence
          Length = 1096

 Score =  289 bits (146), Expect = 3e-75
 Identities = 305/359 (84%)
 Strand = Plus / Minus

                                                                       
Query: 20  ttgagcatgatgatgaggactnggacgagnacggcaacaaagtcggtgaagagggtgagg 79
           ||||||||||||| ||||||  ||||||| ||||| || ||||| |||||||||||||||
Sbjct: 781 ttgagcatgatgacgaggacgcggacgaggacggccacgaagtctgtgaagagggtgagg 722

                                                                       
Query: 80  gcgtgcttgatgtagtccatgtcgccatggtgcgccctctcgatgatctcctgcgtgtcg 139
           |||||||||| || ||||||||||||  ||||||||||||||||||||||||||||||||
Sbjct: 721 gcgtgcttgacgtggtccatgtcgccgcggtgcgccctctcgatgatctcctgcgtgtcg 662

                                                                       
Query: 140 tacaccatgtaccccaggaagatcaacaggccaaagtaaacctcaaacatgaagctgcca 199
           ||||||| ||| ||||||||||| | ||| || ||||| ||||| ||||||||||||   
Sbjct: 661 tacaccacgtagcccaggaagatgagcagcccgaagtagacctcgaacatgaagctggtt 602

                                                                       
Query: 200 gaggagtggccaaagatggacgtggcaaactgcagccagagcaggatcgacaggccanac 259
           | ||||||||| ||||||||   ||| | |||||||||||||||||| || || ||  ||
Sbjct: 601 gcggagtggccgaagatggagccggctagctgcagccagagcaggatggagagccccgac 542

                                                                       
Query: 260 gagagcaggccaccgaggtacaggtactccctgcgcttggcgatgatggcggcgccagag 319
           |||||||| ||||| ||||| ||||||||||||||| |||| |  ||||| ||||| | |
Sbjct: 541 gagagcagcccacccaggtagaggtactccctgcgcctggccaccatggccgcgccggtg 482

                                                                      
Query: 320 aagcacccaaaggcgatggcggttccgacaaaccctgtcacgaggatgcttgggtcaaa 378
           |||||| | || |||||||| || || || ||| | ||||| |||||||||||||||||
Sbjct: 481 aagcacgcgaacgcgatggcagtccccacgaacgccgtcaccaggatgcttgggtcaaa 423



to top

>emb|AJ278816.1|HVU278816 Hordeum vulgare partial mRNA for putative BAX inhibitor 1 (pBI-1
           gene)
          Length = 438

 Score =  281 bits (142), Expect = 8e-73
 Identities = 142/142 (100%)
 Strand = Plus / Minus

                                                                       
Query: 258 acgagagcaggccaccgaggtacaggtactccctgcgcttggcgatgatggcggcgccag 317
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 acgagagcaggccaccgaggtacaggtactccctgcgcttggcgatgatggcggcgccag 377

                                                                       
Query: 318 agaagcacccaaaggcgatggcggttccgacaaaccctgtcacgaggatgcttgggtcaa 377
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 agaagcacccaaaggcgatggcggttccgacaaaccctgtcacgaggatgcttgggtcaa 317

                                 
Query: 378 agtctatggcaagctcaatcag 399
           ||||||||||||||||||||||
Sbjct: 316 agtctatggcaagctcaatcag 295



to top

>gb|AY107681.1| Zea mays PCO116018 mRNA sequence
          Length = 978

 Score =  248 bits (125), Expect = 1e-62
 Identities = 235/272 (86%)
 Strand = Plus / Minus

                                                                       
Query: 53  gcaacaaagtcggtgaagagggtgagggcgtgcttgatgtagtccatgtcgccatggtgc 112
           |||||||||||||||||||| || || ||||||||||||||||||||||| ||| |||||
Sbjct: 742 gcaacaaagtcggtgaagagagtcagcgcgtgcttgatgtagtccatgtccccacggtgc 683

                                                                       
Query: 113 gccctctcgatgatctcctgcgtgtcgtacaccatgtaccccaggaagatcaacaggcca 172
           |||||||||||||||||||| |||||  ||||||| || |||||||| | ||  ||||||
Sbjct: 682 gccctctcgatgatctcctgggtgtcaaacaccatatatcccaggaaaaccaggaggcca 623

                                                                       
Query: 173 aagtaaacctcaaacatgaagctgccagaggagtggccaaagatggacgtggcaaactgc 232
           ||||| | ||||||||||||| |  |   || |||||||||||| || || |||||||||
Sbjct: 622 aagtagagctcaaacatgaaggtcgcgctggtgtggccaaagattgaagtagcaaactgc 563

                                                                       
Query: 233 agccagagcaggatcgacaggccanacgagagcaggccaccgaggtacaggtactccctg 292
           |||||||| || || || |||||| | || ||||| || |||||||||||||| ||||||
Sbjct: 562 agccagagaagaatggagaggccagatgaaagcagaccgccgaggtacaggtattccctg 503

                                           
Query: 293 cgcttggcgatgatggcggcgccagagaagca 324
           ||||||||||||||||| ||||||||||||||
Sbjct: 502 cgcttggcgatgatggcagcgccagagaagca 471



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  206 bits (104), Expect = 4e-50
 Identities = 144/158 (91%)
 Strand = Plus / Minus

                                                                           
Query: 25      catgatgatgaggactnggacgagnacggcaacaaagtcggtgaagagggtgagggcgtg 84
               |||||||| |||||   |||| || ||||| || ||||| |||||||||||||| |||||
Sbjct: 1329831 catgatgacgaggatccggacaaggacggccacgaagtcagtgaagagggtgagtgcgtg 1329772

                                                                           
Query: 85      cttgatgtagtccatgtcgccatggtgcgccctctcgatgatctcctgcgtgtcgtacac 144
               |||||||||||||||||| || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 1329771 cttgatgtagtccatgtcaccgtggtgagccctctcgatgatctcctgcgtgtcatacac 1329712

                                                     
Query: 145     catgtaccccaggaagatcaacaggccaaagtaaacct 182
               ||||||||||||||||||||||||||||||||||||||
Sbjct: 1329711 catgtaccccaggaagatcaacaggccaaagtaaacct 1329674



 Score =  174 bits (88), Expect = 1e-40
 Identities = 165/191 (86%)
 Strand = Plus / Minus

                                                                           
Query: 179     acctcaaacatgaagctgccagaggagtggccaaagatggacgtggcaaactgcagccag 238
               |||||||||||||||||||| | |||||||||||||||||| | ||||||||||||||||
Sbjct: 1329581 acctcaaacatgaagctgccggtggagtggccaaagatggatgcggcaaactgcagccag 1329522

                                                                           
Query: 239     agcaggatcgacaggccanacgagagcaggccaccgaggtacaggtactccctgcgcttg 298
               |||||||| || |||||| | |||||||  ||||| ||||| ||||||||||| ||||||
Sbjct: 1329521 agcaggatggagaggccagaagagagcaaaccaccaaggtagaggtactccctacgcttg 1329462

                                                                           
Query: 299     gcgatgatggcggcgccagagaagcacccaaaggcgatggcggttccgacaaaccctgtc 358
               || | |||||| |||| || |||||||||||| || ||||| ||||| |||||  |||| 
Sbjct: 1329461 gcaacgatggcagcgcaagtgaagcacccaaatgcaatggcagttccaacaaatgctgtt 1329402

                          
Query: 359     acgaggatgct 369
               ||||| |||||
Sbjct: 1329401 acgagaatgct 1329391



to top

>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0482F12
          Length = 147735

 Score =  206 bits (104), Expect = 4e-50
 Identities = 144/158 (91%)
 Strand = Plus / Minus

                                                                         
Query: 25    catgatgatgaggactnggacgagnacggcaacaaagtcggtgaagagggtgagggcgtg 84
             |||||||| |||||   |||| || ||||| || ||||| |||||||||||||| |||||
Sbjct: 11103 catgatgacgaggatccggacaaggacggccacgaagtcagtgaagagggtgagtgcgtg 11044

                                                                         
Query: 85    cttgatgtagtccatgtcgccatggtgcgccctctcgatgatctcctgcgtgtcgtacac 144
             |||||||||||||||||| || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 11043 cttgatgtagtccatgtcaccgtggtgagccctctcgatgatctcctgcgtgtcatacac 10984

                                                   
Query: 145   catgtaccccaggaagatcaacaggccaaagtaaacct 182
             ||||||||||||||||||||||||||||||||||||||
Sbjct: 10983 catgtaccccaggaagatcaacaggccaaagtaaacct 10946



 Score =  174 bits (88), Expect = 1e-40
 Identities = 165/191 (86%)
 Strand = Plus / Minus

                                                                         
Query: 179   acctcaaacatgaagctgccagaggagtggccaaagatggacgtggcaaactgcagccag 238
             |||||||||||||||||||| | |||||||||||||||||| | ||||||||||||||||
Sbjct: 10853 acctcaaacatgaagctgccggtggagtggccaaagatggatgcggcaaactgcagccag 10794

                                                                         
Query: 239   agcaggatcgacaggccanacgagagcaggccaccgaggtacaggtactccctgcgcttg 298
             |||||||| || |||||| | |||||||  ||||| ||||| ||||||||||| ||||||
Sbjct: 10793 agcaggatggagaggccagaagagagcaaaccaccaaggtagaggtactccctacgcttg 10734

                                                                         
Query: 299   gcgatgatggcggcgccagagaagcacccaaaggcgatggcggttccgacaaaccctgtc 358
             || | |||||| |||| || |||||||||||| || ||||| ||||| |||||  |||| 
Sbjct: 10733 gcaacgatggcagcgcaagtgaagcacccaaatgcaatggcagttccaacaaatgctgtt 10674

                        
Query: 359   acgaggatgct 369
             ||||| |||||
Sbjct: 10673 acgagaatgct 10663



to top

>gb|BT018201.1| Zea mays clone EL01N0559D10.c mRNA sequence
          Length = 1127

 Score =  182 bits (92), Expect = 6e-43
 Identities = 126/138 (91%)
 Strand = Plus / Minus

                                                                       
Query: 25  catgatgatgaggactnggacgagnacggcaacaaagtcggtgaagagggtgagggcgtg 84
           |||||||| ||||||  ||||||| ||||| || ||||||||||||||||||||||||||
Sbjct: 711 catgatgacgaggacgcggacgaggacggccacgaagtcggtgaagagggtgagggcgtg 652

                                                                       
Query: 85  cttgatgtagtccatgtcgccatggtgcgccctctcgatgatctcctgcgtgtcgtacac 144
           ||||| || ||||||||||||  |||||||||||||||||||||||||||||||||||||
Sbjct: 651 cttgacgtggtccatgtcgccgcggtgcgccctctcgatgatctcctgcgtgtcgtacac 592

                             
Query: 145 catgtaccccaggaagat 162
           || ||| |||||||||||
Sbjct: 591 cacgtagcccaggaagat 574



 Score =  103 bits (52), Expect = 4e-19
 Identities = 156/191 (81%)
 Strand = Plus / Minus

                                                                       
Query: 179 acctcaaacatgaagctgccagaggagtggccaaagatggacgtggcaaactgcagccag 238
           ||||| ||||||||||||   | ||||||||| |||||||| | ||| | ||||||||||
Sbjct: 428 acctcgaacatgaagctggttgcggagtggccgaagatggaggcggcgagctgcagccag 369

                                                                       
Query: 239 agcaggatcgacaggccanacgagagcaggccaccgaggtacaggtactccctgcgcttg 298
           |||||||| || || ||  |||||||||| || || ||||| ||||||||||||||| ||
Sbjct: 368 agcaggatggagagccccgacgagagcagcccgcccaggtagaggtactccctgcgcctg 309

                                                                       
Query: 299 gcgatgatggcggcgccagagaagcacccaaaggcgatggcggttccgacaaaccctgtc 358
           || |  ||||| ||||| ||||||||| | || |||||||| || || || ||| | |||
Sbjct: 308 gccaccatggccgcgccggagaagcacgcgaacgcgatggcagtccccacgaacgccgtc 249

                      
Query: 359 acgaggatgct 369
           || ||||||||
Sbjct: 248 accaggatgct 238



to top

>gb|AF453320.1| Brassica oleracea bax inhibitor-like protein (BI1) mRNA, complete
           cds
          Length = 1013

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                       
Query: 209 ccaaagatggacgtggcaaactgcagccagagcaggatcgacaggccanacgagagcagg 268
           ||||||||||| | ||||||||| ||||| |  || || |||| |||| | || ||||| 
Sbjct: 523 ccaaagatggaagaggcaaactgaagccacataagcatggacaagccagatgaaagcagt 464

                                     
Query: 269 ccaccgaggtacaggtactccctgcg 294
           || |||||||| |||||||| |||||
Sbjct: 463 cctccgaggtagaggtactctctgcg 438



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 328 aaaggcgatggcggttccgacaaaccctgtcacgaggatgcttgggtcaaa 378
           |||||| || || |||||||||||| | || | ||||||||||||||||||
Sbjct: 404 aaaggctatcgcagttccgacaaacgcagtgatgaggatgcttgggtcaaa 354



to top

>gb|AC183495.1| Brassica oleracea Contig A, complete sequence
          Length = 356505

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                          
Query: 209    ccaaagatggacgtggcaaactgcagccagagcaggatcgacaggccanacgagagcagg 268
              ||||||||||| | ||||||||| ||||| |  || || |||| |||| | || ||||| 
Sbjct: 250210 ccaaagatggaagaggcaaactgaagccacattagcattgacaagccagatgaaagcagt 250269

                                        
Query: 269    ccaccgaggtacaggtactccctgcg 294
              || |||||||| |||||||| |||||
Sbjct: 250270 cctccgaggtagaggtactctctgcg 250295



to top

>gb|AF390555.1| Brassica napus Bax inhibitor 1 (BI-1) mRNA, complete cds
          Length = 1010

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                       
Query: 209 ccaaagatggacgtggcaaactgcagccagagcaggatcgacaggccanacgagagcagg 268
           ||||||||||| | ||||||||| ||||| |  || || |||| |||| | || ||||| 
Sbjct: 546 ccaaagatggaagaggcaaactgaagccacataagcatggacaagccagatgaaagcagt 487

                                     
Query: 269 ccaccgaggtacaggtactccctgcg 294
           || |||||||| |||||||| |||||
Sbjct: 486 cctccgaggtagaggtactctctgcg 461



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 328 aaaggcgatggcggttccgacaaaccctgtcacgaggatgcttgggtcaaa 378
           |||||| || || |||||||||||| | || | ||||||||||||||||||
Sbjct: 427 aaaggctatcgcagttccgacaaacgcagtgatgaggatgcttgggtcaaa 377



to top

>gb|AY380778.1| Lycopersicon esculentum Bax inhibitor (BI-1) mRNA, complete cds
          Length = 1127

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 266 aggccaccgaggtacaggtactccctgcgc 295
           ||||| |||||||||| |||||||||||||
Sbjct: 578 aggcccccgaggtacaagtactccctgcgc 549



to top

>gb|AC011447.7| Homo sapiens chromosome 19 clone CTC-260E6, complete sequence
          Length = 165676

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 153   ccaggaagatcaacaggccaaa 174
             ||||||||||||||||||||||
Sbjct: 83723 ccaggaagatcaacaggccaaa 83744



to top

>gb|AC008554.8| Homo sapiens chromosome 19 clone CTC-513N18, complete sequence
          Length = 166873

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 153   ccaggaagatcaacaggccaaa 174
             ||||||||||||||||||||||
Sbjct: 49580 ccaggaagatcaacaggccaaa 49559



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 154   caggaagatcaacaggccaaa 174
             |||||||||||||||||||||
Sbjct: 44977 caggaagatcaacaggccaaa 44997



to top

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 81      cgtgcttgatgtagtccatgt 101
               |||||||||||||||||||||
Sbjct: 3404523 cgtgcttgatgtagtccatgt 3404543



to top

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     cgtgcttgatgtagtccatgt 101
              |||||||||||||||||||||
Sbjct: 442053 cgtgcttgatgtagtccatgt 442073



to top

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     cgtgcttgatgtagtccatgt 101
              |||||||||||||||||||||
Sbjct: 251903 cgtgcttgatgtagtccatgt 251923



to top

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 81     cgtgcttgatgtagtccatgt 101
              |||||||||||||||||||||
Sbjct: 245258 cgtgcttgatgtagtccatgt 245278



to top

>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
              sequence
          Length = 1783081

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     gagggtgagggcgtgcttga 89
              ||||||||||||||||||||
Sbjct: 515474 gagggtgagggcgtgcttga 515493



to top

>ref|XM_957333.1| Neurospora crassa OR74A hypothetical protein (NCU07910.1) partial
           mRNA
          Length = 1398

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  gtcggtgaagagggtgaggg 80
           ||||||||||||||||||||
Sbjct: 696 gtcggtgaagagggtgaggg 677



to top

>ref|XM_328615.1| Neurospora crassa OR74A hypothetical protein (NCU07910.1) partial
           mRNA
          Length = 1398

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  gtcggtgaagagggtgaggg 80
           ||||||||||||||||||||
Sbjct: 696 gtcggtgaagagggtgaggg 677



to top

>ref|XM_570465.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CND01920) partial mRNA
          Length = 3079

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 70   gagggtgagggcgtgcttga 89
            ||||||||||||||||||||
Sbjct: 2110 gagggtgagggcgtgcttga 2091



to top

>gb|AC073530.18| Homo sapiens 12 BAC RP11-123O10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 156390

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    tgaagctgccagaggagtgg 208
              ||||||||||||||||||||
Sbjct: 133533 tgaagctgccagaggagtgg 133552



to top

>gb|AC129217.3| Mus musculus BAC clone RP24-458M20 from chromosome 19, complete
             sequence
          Length = 175796

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   caaacatgaagctgccagag 202
             ||||||||||||||||||||
Sbjct: 23170 caaacatgaagctgccagag 23151



to top

>gb|AC073153.16| Mus musculus Strain C57BL6/J chromosome 19 BAC, RP23-49P8 Complete
              Sequence, complete sequence
          Length = 220143

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    caaacatgaagctgccagag 202
              ||||||||||||||||||||
Sbjct: 206772 caaacatgaagctgccagag 206791



to top

>gb|DQ397554.1| Cenarchaeum symbiosum clone C08F03, complete sequence
          Length = 36219

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   ccctctcgatgatctcctgc 133
             ||||||||||||||||||||
Sbjct: 28492 ccctctcgatgatctcctgc 28473



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 286      ctccctgcgcttggcgatga 305
                ||||||||||||||||||||
Sbjct: 34065651 ctccctgcgcttggcgatga 34065670



to top

>gb|AC026359.25| Homo sapiens 3 BAC RP11-462A6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 78848

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   ttgggtcaaagtctatggca 388
             ||||||||||||||||||||
Sbjct: 45444 ttgggtcaaagtctatggca 45425



to top

>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0034E02
          Length = 165497

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 286   ctccctgcgcttggcgatga 305
             ||||||||||||||||||||
Sbjct: 62129 ctccctgcgcttggcgatga 62148



to top

>emb|BX004819.11| Zebrafish DNA sequence from clone CH211-208B16 in linkage group 8,
             complete sequence
          Length = 234864

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   acatgaagctgccagaggag 205
             ||||||||||||||||||||
Sbjct: 64510 acatgaagctgccagaggag 64529



to top

>emb|CR361554.35| Zebrafish DNA sequence from clone CH211-222L15 in linkage group 6,
             complete sequence
          Length = 187638

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   acatgaagctgccagaggag 205
             ||||||||||||||||||||
Sbjct: 19571 acatgaagctgccagaggag 19590


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,489,190
Number of Sequences: 3902068
Number of extensions: 2489190
Number of successful extensions: 47502
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47354
Number of HSP's gapped (non-prelim): 148
length of query: 399
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 377
effective length of database: 17,147,199,772
effective search space: 6464494314044
effective search space used: 6464494314044
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top