>CIP8_ARATH (Q9SPL2) Ubiquitin-protein ligase CIP8 (EC 6.3.2.-)|
           (COP1-interacting protein 8)
          Length = 334

 Score = 37.0 bits (84), Expect = 0.015
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 9/51 (17%)
 Frame = -1

Query: 126 QHLAENDPS----RYGTPPAKKEAVEALPTVKI-----EEVVSCSVCLDDL 1
           Q+LAE D      R G PPA K A+EAL T ++     E V+ C+VC D +
Sbjct: 214 QNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGM 264

>RN126_HUMAN (Q9BV68) RING finger protein 126|
          Length = 326

 Score = 35.4 bits (80), Expect = 0.044
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = -1

Query: 93  GTPPAKKEAVEALPTVKIEEV-----VSCSVCLDD 4
           G PPA KE ++ALPTV + E      + C VC DD
Sbjct: 201 GPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDD 235

>RN126_MOUSE (Q91YL2) RING finger protein 126|
          Length = 313

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = -1

Query: 93  GTPPAKKEAVEALPTVKIEEV-----VSCSVCLDD 4
           G PPA KE ++ALPTV + E      + C VC +D
Sbjct: 203 GPPPADKEKIQALPTVPVTEEHVGSGLECPVCKED 237

>R126A_XENLA (Q7T0Q3) RING finger protein 126-A|
          Length = 312

 Score = 32.7 bits (73), Expect = 0.29
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = -1

Query: 93  GTPPAKKEAVEALPTVKIEEV-----VSCSVCLDD 4
           G PPA  E ++ALPT++I E      + C VC +D
Sbjct: 200 GPPPADNEKIQALPTIQITEEHVGSGLECPVCKED 234

>RN126_XENTR (Q6DIP3) RING finger protein 126|
          Length = 311

 Score = 32.3 bits (72), Expect = 0.38
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = -1

Query: 93  GTPPAKKEAVEALPTVKIEEV-----VSCSVCLDD 4
           G PPA  E ++ALPT++I E      + C VC +D
Sbjct: 199 GPPPADTEKIQALPTIQITEEHVGSGLECPVCKED 233

>R126B_XENLA (Q6IRP0) RING finger protein 126-B|
          Length = 312

 Score = 31.2 bits (69), Expect = 0.84
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
 Frame = -1

Query: 93  GTPPAKKEAVEALPTVKIEEV-----VSCSVCLDD 4
           G PPA  + ++ALPT++I E      + C VC +D
Sbjct: 200 GPPPADTDKIQALPTIQITEEHVGFGLECPVCKED 234

>ZN364_MOUSE (Q9D0C1) Zinc finger protein 364 (Rabring 7)|
          Length = 305

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 5/35 (14%)
 Frame = -1

Query: 93  GTPPAKKEAVEALPTVKI--EEV---VSCSVCLDD 4
           G PPA KE + +LPTV +  E+V   + C VC +D
Sbjct: 201 GPPPADKEKITSLPTVTVTQEQVNTGLECPVCKED 235

>ZN364_HUMAN (Q9Y4L5) Zinc finger protein 364 (Rabring 7) (RING finger protein|
           115)
          Length = 304

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 5/35 (14%)
 Frame = -1

Query: 93  GTPPAKKEAVEALPTVKI--EEV---VSCSVCLDD 4
           G PPA KE + +LPTV +  E+V   + C VC +D
Sbjct: 200 GPPPADKEKITSLPTVTVTQEQVDMGLECPVCKED 234

>NHL1_CAEEL (Q03601) RING finger protein nhl-1|
          Length = 974

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 87  PPAKKEAVEALPTVKIEEVVSCSVCLD 7
           PP+ + A    P  KIE++++C +CLD
Sbjct: 22  PPSSRPADFVNPLEKIEQLLTCPICLD 48

>SYS_SULAC (Q4J8I4) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 458

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -1

Query: 93  GTPPAKKEAVEA-LPT-VKIEEVVSCSVCLD 7
           G P AKK  +E  +P   K  E+VSCS CLD
Sbjct: 349 GAPAAKKYDLEVWMPAQAKFREMVSCSNCLD 379


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,977,425
Number of Sequences: 219361
Number of extensions: 202976
Number of successful extensions: 685
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 80,573,946
effective HSP length: 17
effective length of database: 76,844,809
effective search space used: 1844275416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)