ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasda10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469695.1| Oryza sativa (japonica cultivar-group), mRNA 80 1e-11
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 80 1e-11
3gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genom... 80 1e-11
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
5dbj|AK102540.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 1e-11
6dbj|AK067800.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 1e-11
7gb|AC025822.7| Homo sapiens chromosome 10 clone RP11-433J20, com... 46 0.16
8gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosom... 46 0.16
9gb|AC165162.4| Mus musculus BAC clone RP23-173L24 from chromosom... 44 0.63
10gb|AC146144.2| Pan troglodytes BAC clone RP43-37J17 from 7, comp... 44 0.63
11gb|AC146041.2| Pan troglodytes BAC clone RP43-98A7 from 7, compl... 44 0.63
12gb|AC146378.2| Pan troglodytes BAC clone RP43-93I8 from 7, compl... 44 0.63
13gb|AC092099.4| Homo sapiens BAC clone RP11-616A20 from 7, comple... 44 0.63
14gb|AC120000.17| Mus musculus chromosome 3, clone RP24-133F9, com... 44 0.63
15gb|AF165144.4| Homo sapiens chromosome 8 clone CTA-393A7 map 8ce... 44 0.63
16gb|AC154323.3| Mus musculus BAC clone RP23-307K19 from chromosom... 44 0.63
17gb|U38378.1| Caenorhabditis elegans cosmid R11F4, complete sequence 42 2.5
18gb|AC146600.4| Mus musculus BAC clone RP23-386G7 from chromosome... 42 2.5
19gb|AC122377.4| Mus musculus BAC clone RP23-473B13 from chromosom... 42 2.5
20gb|AC108699.3| Homo sapiens 3q BAC RP11-13I12 (Roswell Park Canc... 42 2.5
21emb|BX511106.5| Mouse DNA sequence from clone RP24-82J19 on chro... 42 2.5
22gb|AC069066.22| Homo sapiens 3 BAC RP11-261E7 (Roswell Park Canc... 42 2.5
23dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
24gb|AC010885.8| Homo sapiens BAC clone RP11-368K23 from 2, comple... 42 2.5
25dbj|AP004572.5| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
26dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
27emb|CR788257.9| Zebrafish DNA sequence from clone DKEY-244H24 in... 42 2.5
28gb|AC159644.3| Mus musculus BAC clone RP23-358A18 from chromosom... 42 2.5
29emb|AL671848.7| Mouse DNA sequence from clone RP23-110K5 on chro... 42 2.5
30gb|AC158404.2| Mus musculus BAC clone RP24-112K13 from chromosom... 42 2.5
31gb|AC160126.2| Mus musculus BAC clone RP23-295C1 from chromosome... 40 9.8
32gb|AC147985.3| Mus musculus BAC clone RP24-402C11 from chromosom... 40 9.8
33gb|AC131336.9| Mus musculus chromosome 1, clone RP23-96A20, comp... 40 9.8
34gb|AY350715.1| Arabidopsis arenosa clone BAC Aer1B10, complete s... 40 9.8
35gb|AC023174.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 9.8
36gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 40 9.8
37emb|AJ000018.1|SSSP13J9 Sus scrofa genomic microsatellite sequen... 40 9.8
38gb|AC129304.6| Mus musculus BAC clone RP24-462H23 from chromosom... 40 9.8
39gb|AC122018.4| Mus musculus BAC clone RP24-361O20 from chromosom... 40 9.8
40gb|AC125517.4| Mus musculus BAC clone RP24-261P6 from chromosome... 40 9.8
41ref|XM_652382.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 9.8
42emb|CR391949.7| Zebrafish DNA sequence from clone CH211-149B20 i... 40 9.8
43emb|BX323860.7| Human DNA sequence from clone RP11-552D4 on chro... 40 9.8
44emb|AL662799.16| Human DNA sequence from clone XXbac-294E21 on c... 40 9.8
45emb|AL392106.4| Human DNA sequence from clone RP11-563H8 on chro... 40 9.8
46emb|AL365199.11| Human DNA sequence from clone RP11-124O11 on ch... 40 9.8
47emb|AL390736.6| Human DNA sequence from clone RP11-209J19 on chr... 40 9.8
48emb|AL161903.19| Human DNA sequence from clone RP11-175A4 on chr... 40 9.8
49emb|AL157402.19| Human DNA sequence from clone RP11-553K8 on chr... 40 9.8
50emb|AL031368.2|HS662N3 Human DNA sequence from clone RP4-662N3 o... 40 9.8
51emb|AL645522.12| Mouse DNA sequence from clone RP23-64E17 on chr... 40 9.8
52emb|CR559945.12| Zebrafish DNA sequence from clone CH211-195E19 ... 40 9.8
53emb|CR407560.11| Zebrafish DNA sequence from clone CH211-180L14,... 40 9.8
54emb|AL929349.10| Zebrafish DNA sequence from clone CH211-207D24 ... 40 9.8
55emb|BX539346.8| Zebrafish DNA sequence from clone DKEYP-73G7 in ... 40 9.8
56gb|AC116105.12| Mus musculus chromosome 1, clone RP23-23A4, comp... 40 9.8
57gb|AC010653.10| Homo sapiens chromosome 16 clone RP11-417N10, co... 40 9.8
58gb|AC099544.2| Homo sapiens chromosome 3 clone RP11-600G19, comp... 40 9.8
59emb|AL627164.8| Zebrafish DNA sequence from clone RP71-1I20 in l... 40 9.8
60gb|AC011087.6| Homo sapiens, clone RP11-21L20, complete sequence 40 9.8
61gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Can... 40 9.8
62gb|AC005500.2| Homo sapiens 22q11 PAC Clone Clone p52f6 In DGCR ... 40 9.8
63gb|AC007731.16| Homo sapiens chromosome 22 clone b562f10 map 22q... 40 9.8
64gb|AC090517.2|AC090517 Homo sapiens chromosome 15 clone RP11-31H... 40 9.8
65dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
66gb|AF309689.1|AF309689 Neurospora crassa chromosome 4 pdx-1 region 40 9.8
67gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosom... 40 9.8
68gb|AC009097.9| Homo sapiens chromosome 16 clone RP11-432I5, comp... 40 9.8
69gb|AC153575.5| Mus musculus 6 BAC RP23-157O3 (Roswell Park Cance... 40 9.8
70gb|AC113610.4| Homo sapiens BAC clone RP11-373H2 from 2, complet... 40 9.8
71gb|AC135966.2| Homo sapiens chromosome 3 clone RP11-94D3, comple... 40 9.8
72gb|AC093424.3| Homo sapiens chromosome 1 clone RP11-467C18, comp... 40 9.8
73emb|BX005396.5| Zebrafish DNA sequence from clone CH211-128N12, ... 40 9.8
74gb|AC002477.1|AC002477 Human PAC clone RP3-327A19 from Xq25-q26,... 40 9.8
75gb|AC004827.1|AC004827 Homo sapiens PAC clone RP1-44L15 from Xq2... 40 9.8
76gb|U00066.1| Caenorhabditis elegans cosmid R12B2, complete sequence 40 9.8
77gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 9.8
78emb|BX537249.8| Zebrafish DNA sequence from clone DKEY-77B17 in ... 40 9.8
79emb|AL954147.12| Zebrafish DNA sequence from clone CH211-117H23 ... 40 9.8
80emb|AL837520.26| Mouse DNA sequence from clone RP23-412O4 on chr... 40 9.8
81emb|AL929284.12| Zebrafish DNA sequence from clone CH211-160H23 ... 40 9.8
82gb|AC164611.3| Mus musculus BAC clone RP23-421C2 from chromosome... 40 9.8
83gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.8
84emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on ch... 40 9.8
85gb|AC148007.3| Mus musculus BAC clone RP23-273G4 from 1, complet... 40 9.8
86emb|AL845300.11| Mouse DNA sequence from clone RP23-397A17 on ch... 40 9.8
87emb|AL691422.15| Mouse DNA sequence from clone RP23-85B20 on chr... 40 9.8
88emb|CT010439.6| Mouse DNA sequence from clone RP23-26E8 on chrom... 40 9.8
89gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosom... 40 9.8
90emb|AL807240.12| Mouse DNA sequence from clone RP23-394F6 on chr... 40 9.8
91gb|M84916.1|ONGACT1A Onchocerca volvulus actin 1 (actin-1A) gene... 40 9.8 
>ref|XM_469695.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4020

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 121/148 (81%)
 Strand = Plus / Minus

                                                                        
Query: 564  ttcagctcaggtcatagcatgtgggtaaggagcaaagcgaattgtaaatttgctcagcct 623
            |||| |||| |||||||||||||||||  ||||| ||  |||||||||    |||||| |
Sbjct: 3448 ttcacctcatgtcatagcatgtgggtagagagcacagtaaattgtaaaccgcctcagctt 3389

                                                                        
Query: 624  tgggacgcctagatgcggttcctctggtgcactggtagaatagatcaattagaaatctta 683
            | || |||  ||||||  ||||| | |||||||||||||| ||||| || |  | |||||
Sbjct: 3388 ttgggcgctcagatgcaattcctttagtgcactggtagaagagatctatcaacagtctta 3329

                                        
Query: 684  gtttctctgcatgagcatcagatgtgat 711
            |||| |||||||||||||||||||||||
Sbjct: 3328 gtttttctgcatgagcatcagatgtgat 3301
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 121/148 (81%)
 Strand = Plus / Plus

                                                                            
Query: 564      ttcagctcaggtcatagcatgtgggtaaggagcaaagcgaattgtaaatttgctcagcct 623
                |||| |||| |||||||||||||||||  ||||| ||  |||||||||    |||||| |
Sbjct: 30257100 ttcacctcatgtcatagcatgtgggtagagagcacagtaaattgtaaaccgcctcagctt 30257159

                                                                            
Query: 624      tgggacgcctagatgcggttcctctggtgcactggtagaatagatcaattagaaatctta 683
                | || |||  ||||||  ||||| | |||||||||||||| ||||| || |  | |||||
Sbjct: 30257160 ttgggcgctcagatgcaattcctttagtgcactggtagaagagatctatcaacagtctta 30257219

                                            
Query: 684      gtttctctgcatgagcatcagatgtgat 711
                |||| |||||||||||||||||||||||
Sbjct: 30257220 gtttttctgcatgagcatcagatgtgat 30257247
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>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete
             sequence
          Length = 130359

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 121/148 (81%)
 Strand = Plus / Plus

                                                                         
Query: 564   ttcagctcaggtcatagcatgtgggtaaggagcaaagcgaattgtaaatttgctcagcct 623
             |||| |||| |||||||||||||||||  ||||| ||  |||||||||    |||||| |
Sbjct: 48780 ttcacctcatgtcatagcatgtgggtagagagcacagtaaattgtaaaccgcctcagctt 48839

                                                                         
Query: 624   tgggacgcctagatgcggttcctctggtgcactggtagaatagatcaattagaaatctta 683
             | || |||  ||||||  ||||| | |||||||||||||| ||||| || |  | |||||
Sbjct: 48840 ttgggcgctcagatgcaattcctttagtgcactggtagaagagatctatcaacagtctta 48899

                                         
Query: 684   gtttctctgcatgagcatcagatgtgat 711
             |||| |||||||||||||||||||||||
Sbjct: 48900 gtttttctgcatgagcatcagatgtgat 48927
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 121/148 (81%)
 Strand = Plus / Plus

                                                                            
Query: 564      ttcagctcaggtcatagcatgtgggtaaggagcaaagcgaattgtaaatttgctcagcct 623
                |||| |||| |||||||||||||||||  ||||| ||  |||||||||    |||||| |
Sbjct: 30348522 ttcacctcatgtcatagcatgtgggtagagagcacagtaaattgtaaaccgcctcagctt 30348581

                                                                            
Query: 624      tgggacgcctagatgcggttcctctggtgcactggtagaatagatcaattagaaatctta 683
                | || |||  ||||||  ||||| | |||||||||||||| ||||| || |  | |||||
Sbjct: 30348582 ttgggcgctcagatgcaattcctttagtgcactggtagaagagatctatcaacagtctta 30348641

                                            
Query: 684      gtttctctgcatgagcatcagatgtgat 711
                |||| |||||||||||||||||||||||
Sbjct: 30348642 gtttttctgcatgagcatcagatgtgat 30348669
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>dbj|AK102540.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096K05, full
            insert sequence
          Length = 2363

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 121/148 (81%)
 Strand = Plus / Minus

                                                                        
Query: 564  ttcagctcaggtcatagcatgtgggtaaggagcaaagcgaattgtaaatttgctcagcct 623
            |||| |||| |||||||||||||||||  ||||| ||  |||||||||    |||||| |
Sbjct: 1779 ttcacctcatgtcatagcatgtgggtagagagcacagtaaattgtaaaccgcctcagctt 1720

                                                                        
Query: 624  tgggacgcctagatgcggttcctctggtgcactggtagaatagatcaattagaaatctta 683
            | || |||  ||||||  ||||| | |||||||||||||| ||||| || |  | |||||
Sbjct: 1719 ttgggcgctcagatgcaattcctttagtgcactggtagaagagatctatcaacagtctta 1660

                                        
Query: 684  gtttctctgcatgagcatcagatgtgat 711
            |||| |||||||||||||||||||||||
Sbjct: 1659 gtttttctgcatgagcatcagatgtgat 1632
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>dbj|AK067800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119M02, full
           insert sequence
          Length = 991

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 121/148 (81%)
 Strand = Plus / Minus

                                                                       
Query: 564 ttcagctcaggtcatagcatgtgggtaaggagcaaagcgaattgtaaatttgctcagcct 623
           |||| |||| |||||||||||||||||  ||||| ||  |||||||||    |||||| |
Sbjct: 260 ttcacctcatgtcatagcatgtgggtagagagcacagtaaattgtaaaccgcctcagctt 201

                                                                       
Query: 624 tgggacgcctagatgcggttcctctggtgcactggtagaatagatcaattagaaatctta 683
           | || |||  ||||||  ||||| | |||||||||||||| ||||| || |  | |||||
Sbjct: 200 ttgggcgctcagatgcaattcctttagtgcactggtagaagagatctatcaacagtctta 141

                                       
Query: 684 gtttctctgcatgagcatcagatgtgat 711
           |||| |||||||||||||||||||||||
Sbjct: 140 gtttttctgcatgagcatcagatgtgat 113
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>gb|AC025822.7| Homo sapiens chromosome 10 clone RP11-433J20, complete sequence
          Length = 220031

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 209   tatggaaaattggaaattatcaagaagaaaaatta 243
             |||||||||||| ||||||| ||||||| ||||||
Sbjct: 55046 tatggaaaattgcaaattataaagaagataaatta 55080
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>gb|AC132568.3| Mus musculus BAC clone RP24-484M20 from chromosome 1, complete sequence
          Length = 133079

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 243    acatgacatacacatacacacac 265
              |||||||||||||||||||||||
Sbjct: 108168 acatgacatacacatacacacac 108190
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>gb|AC165162.4| Mus musculus BAC clone RP23-173L24 from chromosome 3, complete sequence
          Length = 211699

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 243   acatgacatacacatacacaca 264
             ||||||||||||||||||||||
Sbjct: 93536 acatgacatacacatacacaca 93515
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>gb|AC146144.2| Pan troglodytes BAC clone RP43-37J17 from 7, complete sequence
          Length = 206029

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 240    attacatgacatacacatacacacac 265
              ||||||||| ||||||||||||||||
Sbjct: 197218 attacatgagatacacatacacacac 197193
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>gb|AC146041.2| Pan troglodytes BAC clone RP43-98A7 from 7, complete sequence
          Length = 120644

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 240   attacatgacatacacatacacacac 265
             ||||||||| ||||||||||||||||
Sbjct: 61005 attacatgagatacacatacacacac 61030
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>gb|AC146378.2| Pan troglodytes BAC clone RP43-93I8 from 7, complete sequence
          Length = 135955

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 240    attacatgacatacacatacacacac 265
              ||||||||| ||||||||||||||||
Sbjct: 104032 attacatgagatacacatacacacac 104057
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>gb|AC092099.4| Homo sapiens BAC clone RP11-616A20 from 7, complete sequence
          Length = 33234

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 240   attacatgacatacacatacacacac 265
             ||||||||| ||||||||||||||||
Sbjct: 22505 attacatgagatacacatacacacac 22530
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>gb|AC120000.17| Mus musculus chromosome 3, clone RP24-133F9, complete sequence
          Length = 149389

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 243   acatgacatacacatacacaca 264
             ||||||||||||||||||||||
Sbjct: 47007 acatgacatacacatacacaca 47028
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>gb|AF165144.4| Homo sapiens chromosome 8 clone CTA-393A7 map 8cen, complete sequence
          Length = 110994

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 230   aagaagaaaaattacatgacat 251
             ||||||||||||||||||||||
Sbjct: 92437 aagaagaaaaattacatgacat 92458
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>gb|AC154323.3| Mus musculus BAC clone RP23-307K19 from chromosome 14, complete sequence
          Length = 191902

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 244    catgacatacacatacacacac 265
              ||||||||||||||||||||||
Sbjct: 152815 catgacatacacatacacacac 152836
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>gb|U38378.1| Caenorhabditis elegans cosmid R11F4, complete sequence
          Length = 27371

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 245   atgacatacacatacacacac 265
             |||||||||||||||||||||
Sbjct: 11894 atgacatacacatacacacac 11874
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>gb|AC146600.4| Mus musculus BAC clone RP23-386G7 from chromosome 17, complete sequence
          Length = 198403

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 221    gaaattatcaagaagaaaaat 241
              |||||||||||||||||||||
Sbjct: 178101 gaaattatcaagaagaaaaat 178121
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>gb|AC122377.4| Mus musculus BAC clone RP23-473B13 from chromosome 17, complete
             sequence
          Length = 174143

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 221   gaaattatcaagaagaaaaat 241
             |||||||||||||||||||||
Sbjct: 63230 gaaattatcaagaagaaaaat 63210
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>gb|AC108699.3| Homo sapiens 3q BAC RP11-13I12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 151580

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 237   aaaattacat-gacatacacatacacaca 264
             |||||||||| ||||||||||||||||||
Sbjct: 74359 aaaattacatagacatacacatacacaca 74331
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>emb|BX511106.5| Mouse DNA sequence from clone RP24-82J19 on chromosome 11 Contains the
             5' end of a novel gene, complete sequence
          Length = 35405

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 248   acatacacatacacacacgac 268
             |||||||||||||||||||||
Sbjct: 31151 acatacacatacacacacgac 31171
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>gb|AC069066.22| Homo sapiens 3 BAC RP11-261E7 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 146446

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                         
Query: 237  aaaattacat-gacatacacatacacaca 264
            |||||||||| ||||||||||||||||||
Sbjct: 8708 aaaattacatagacatacacatacacaca 8680
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 590     aaggagcaaagcgaattgtaaattt 614
               |||||| ||||||||||||||||||
Sbjct: 6877835 aaggagaaaagcgaattgtaaattt 6877859
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>gb|AC010885.8| Homo sapiens BAC clone RP11-368K23 from 2, complete sequence
          Length = 177385

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 248    acatacacatacacacacgac 268
              |||||||||||||||||||||
Sbjct: 143669 acatacacatacacacacgac 143689
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>dbj|AP004572.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0668C05
          Length = 142081

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 590  aaggagcaaagcgaattgtaaattt 614
            |||||| ||||||||||||||||||
Sbjct: 1650 aaggagaaaagcgaattgtaaattt 1674
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>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1118_B03
          Length = 108992

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 590   aaggagcaaagcgaattgtaaattt 614
             |||||| ||||||||||||||||||
Sbjct: 34090 aaggagaaaagcgaattgtaaattt 34114
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>emb|CR788257.9| Zebrafish DNA sequence from clone DKEY-244H24 in linkage group 1,
             complete sequence
          Length = 198219

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 185   aagactcaaatgagtaatataagtt 209
             ||||||||||||||||||| |||||
Sbjct: 80420 aagactcaaatgagtaataaaagtt 80396
to top
>gb|AC159644.3| Mus musculus BAC clone RP23-358A18 from chromosome 12, complete
             sequence
          Length = 196310

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 220   ggaaattatcaagaagaaaaa 240
             |||||||||||||||||||||
Sbjct: 11619 ggaaattatcaagaagaaaaa 11639
to top
>emb|AL671848.7| Mouse DNA sequence from clone RP23-110K5 on chromosome X, complete
              sequence
          Length = 190964

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 245    atgacatacacatacacacac 265
              |||||||||||||||||||||
Sbjct: 120139 atgacatacacatacacacac 120119
to top
>gb|AC158404.2| Mus musculus BAC clone RP24-112K13 from chromosome 12, complete sequence
          Length = 174961

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 220    ggaaattatcaagaagaaaaa 240
              |||||||||||||||||||||
Sbjct: 139515 ggaaattatcaagaagaaaaa 139535
to top
>gb|AC160126.2| Mus musculus BAC clone RP23-295C1 from chromosome 13, complete sequence
          Length = 212570

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 242    tacatgacatacacatacacacac 265
              ||||||||| ||||||||||||||
Sbjct: 146043 tacatgacacacacatacacacac 146020
to top
>gb|AC147985.3| Mus musculus BAC clone RP24-402C11 from chromosome 19, complete sequence
          Length = 170479

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    tgacatacacatacacacac 265
              ||||||||||||||||||||
Sbjct: 114040 tgacatacacatacacacac 114021
to top
>gb|AC131336.9| Mus musculus chromosome 1, clone RP23-96A20, complete sequence
          Length = 121355

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   tacatgacatacacatacacacac 265
             ||||||||| ||||||||||||||
Sbjct: 84725 tacatgacacacacatacacacac 84748
to top
>gb|AY350715.1| Arabidopsis arenosa clone BAC Aer1B10, complete sequence
          Length = 78945

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 223   aattatcaagaagaaaaatt 242
             ||||||||||||||||||||
Sbjct: 60721 aattatcaagaagaaaaatt 60702
to top
>gb|AC023174.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-25N12, complete
              sequence
          Length = 223266

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    acatacacatacacacacga 267
              ||||||||||||||||||||
Sbjct: 146397 acatacacatacacacacga 146378
to top
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041J17, complete sequence
          Length = 148829

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 240   attacatgacatacacatacacac 263
             |||||||| |||||||||||||||
Sbjct: 43530 attacatggcatacacatacacac 43553
to top
>emb|AJ000018.1|SSSP13J9 Sus scrofa genomic microsatellite sequence, clone P13J9
          Length = 573

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 243 acatgacatacacatacacacacg 266
           |||||||| |||||||||||||||
Sbjct: 270 acatgacacacacatacacacacg 293
to top
>gb|AC129304.6| Mus musculus BAC clone RP24-462H23 from chromosome 10, complete sequence
          Length = 153772

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 242    tacatgacatacacatacacacac 265
              ||||||||||||||| ||||||||
Sbjct: 146994 tacatgacatacacacacacacac 147017
to top
>gb|AC122018.4| Mus musculus BAC clone RP24-361O20 from chromosome 10, complete
             sequence
          Length = 173543

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   tacatgacatacacatacacacac 265
             ||||||||||||||| ||||||||
Sbjct: 80752 tacatgacatacacacacacacac 80775
to top
>gb|AC125517.4| Mus musculus BAC clone RP24-261P6 from chromosome 3, complete sequence
          Length = 193517

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    aaaatggagcctttaactaa 173
              ||||||||||||||||||||
Sbjct: 134362 aaaatggagcctttaactaa 134381
to top
>ref|XM_652382.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (1.t00089)
           partial mRNA
          Length = 1134

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 gaaattatcaagaagaaaaa 240
           ||||||||||||||||||||
Sbjct: 317 gaaattatcaagaagaaaaa 336
to top
>emb|CR391949.7| Zebrafish DNA sequence from clone CH211-149B20 in linkage group 9,
              complete sequence
          Length = 162252

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    gaaattatcaagaagaaaaa 240
              ||||||||||||||||||||
Sbjct: 149396 gaaattatcaagaagaaaaa 149415
to top
>emb|BX323860.7| Human DNA sequence from clone RP11-552D4 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 142067

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   atgacatacacatacacaca 264
             ||||||||||||||||||||
Sbjct: 39610 atgacatacacatacacaca 39629
to top
>emb|AL662799.16| Human DNA sequence from clone XXbac-294E21 on chromosome 6 contains the
              gene for a novel protein similar to lysophospholipase II
              (LYPLA2), the KNSL2 gene for kinesin-like 2, the PHF1 gene
              for PHD finger protein 1, the gene for divalent cation
              tolerant protein CUTA, the SYNGAP1 gene for synaptic Ras
              GTPase activating protein 1 homolog and five CpG islands,
              complete sequence
          Length = 136021

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    tgacatacacatacacacac 265
              ||||||||||||||||||||
Sbjct: 133480 tgacatacacatacacacac 133499
to top
>emb|AL392106.4| Human DNA sequence from clone RP11-563H8 on chromosome 9 Contains a novel
              gene (FLJ20808) and a ribosomal protein L23a (RPL23A)
              pseudogene, complete sequence
          Length = 150771

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    aagaagaaaaattacatgac 249
              ||||||||||||||||||||
Sbjct: 140691 aagaagaaaaattacatgac 140710
to top
>emb|AL365199.11| Human DNA sequence from clone RP11-124O11 on chromosome 10 Contains two
             novel genes (FLJ36774) and five CpG islands, complete
             sequence
          Length = 158335

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   acatacacatacacacacga 267
             ||||||||||||||||||||
Sbjct: 30904 acatacacatacacacacga 30885
to top
>emb|AL390736.6| Human DNA sequence from clone RP11-209J19 on chromosome 13 Contains a
             novel gene, complete sequence
          Length = 125681

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   tacatgacatacacatacacacac 265
             ||||||||| ||||||||||||||
Sbjct: 54058 tacatgacacacacatacacacac 54081
to top
>emb|AL161903.19| Human DNA sequence from clone RP11-175A4 on chromosome 6 Contains the
             3' end of the SYNGAP1 gene for synaptic Ras GTPase
             activating protein 1 homolog (rat), complete sequence
          Length = 47104

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   tgacatacacatacacacac 265
             ||||||||||||||||||||
Sbjct: 35574 tgacatacacatacacacac 35593
to top
>emb|AL157402.19| Human DNA sequence from clone RP11-553K8 on chromosome 1q31.2-31.3
             Contains the ATP6V1G3 gene for H+ transporting ATPase
             lysosomal 13kDa V1 subunit G isoform 3, two novel genes, a
             prostatic binding protein (PBP) pseudogene and the 5' end
             of the PTPRC gene for receptor type protein tyrosine
             phosphatase C, complete sequence
          Length = 210331

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   gaaaattggaaattatcaag 232
             ||||||||||||||||||||
Sbjct: 75789 gaaaattggaaattatcaag 75770
to top
>emb|AL031368.2|HS662N3 Human DNA sequence from clone RP4-662N3 on chromosome Xp21.1-21.3,
             complete sequence
          Length = 143890

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 242   tacatgacatacacatacacacac 265
             ||||| ||||||||||||||||||
Sbjct: 11345 tacataacatacacatacacacac 11322
to top
>emb|AL645522.12| Mouse DNA sequence from clone RP23-64E17 on chromosome 11 Cntains the
             3' end of the Nipsnap1 gene for 4-nitrophenylphosphatase
             domain and non-neuronal SNAP25-like protein homolog 1 (C.
             elegans), a novel gene, a ribosomal protein L17 (Rpl17)
             pseudogene, the Nefh gene for neurofilament heavy
             polypeptide, the Ap1b1 gene for adaptor protein complex
             AP-1 beta 1 subunit, the gene for the ortholog of human
             RAS-related protein on chromosome 22, the gene for the
             ortholog of human growth arrest-specific 2 like 1 GAS2L1
             and six CpG islands, complete sequence
          Length = 183758

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   catgacatacacatacacac 263
             ||||||||||||||||||||
Sbjct: 23942 catgacatacacatacacac 23923
to top
>emb|CR559945.12| Zebrafish DNA sequence from clone CH211-195E19 in linkage group 13,
             complete sequence
          Length = 186151

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   ttaactaaattgataactta 185
             ||||||||||||||||||||
Sbjct: 28599 ttaactaaattgataactta 28618
to top
>emb|CR407560.11| Zebrafish DNA sequence from clone CH211-180L14, complete sequence
          Length = 127482

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 683    agtttctctgcatgagcatc 702
              ||||||||||||||||||||
Sbjct: 126477 agtttctctgcatgagcatc 126458
to top
>emb|AL929349.10| Zebrafish DNA sequence from clone CH211-207D24 in linkage group 20
              Contains eight CpG islands, complete sequence
          Length = 196371

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 683    agtttctctgcatgagcatc 702
              ||||||||||||||||||||
Sbjct: 129448 agtttctctgcatgagcatc 129429
to top
>emb|BX539346.8| Zebrafish DNA sequence from clone DKEYP-73G7 in linkage group 23,
             complete sequence
          Length = 171486

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   acacatacacacacgaccag 271
             ||||||||||||||||||||
Sbjct: 49869 acacatacacacacgaccag 49888
to top
>gb|AC116105.12| Mus musculus chromosome 1, clone RP23-23A4, complete sequence
          Length = 214780

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 242    tacatgacatacacatacacacac 265
              ||||||||| ||||||||||||||
Sbjct: 199826 tacatgacacacacatacacacac 199803
to top
>gb|AC010653.10| Homo sapiens chromosome 16 clone RP11-417N10, complete sequence
          Length = 184515

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 672    ttagaaatcttagtttctct 691
              ||||||||||||||||||||
Sbjct: 153148 ttagaaatcttagtttctct 153129
to top
>gb|AC099544.2| Homo sapiens chromosome 3 clone RP11-600G19, complete sequence
          Length = 184019

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   gatgcagtgctgccacaaaa 320
             ||||||||||||||||||||
Sbjct: 54711 gatgcagtgctgccacaaaa 54692
to top
>emb|AL627164.8| Zebrafish DNA sequence from clone RP71-1I20 in linkage group 11,
             complete sequence
          Length = 84892

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 242   tacatgacatacacatacacacac 265
             ||||||||||||||||| ||||||
Sbjct: 72153 tacatgacatacacatatacacac 72130
to top
>gb|AC011087.6| Homo sapiens, clone RP11-21L20, complete sequence
          Length = 157456

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    tgacatacacatacacacac 265
              ||||||||||||||||||||
Sbjct: 111557 tgacatacacatacacacac 111576
to top
>gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 183357

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Minus

                                             
Query: 236    aaaaattacatga--catacacatacacaca 264
              |||||||||||||  ||||||||||||||||
Sbjct: 142102 aaaaattacatgatacatacacatacacaca 142072
to top
>gb|AC005500.2| Homo sapiens 22q11 PAC Clone Clone p52f6 In DGCR Region, complete
             sequence
          Length = 192592

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   atgacatacacatacacaca 264
             ||||||||||||||||||||
Sbjct: 62129 atgacatacacatacacaca 62148
to top
>gb|AC007731.16| Homo sapiens chromosome 22 clone b562f10 map 22q11, complete sequence
          Length = 182617

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   atgacatacacatacacaca 264
             ||||||||||||||||||||
Sbjct: 67171 atgacatacacatacacaca 67190
to top
>gb|AC090517.2|AC090517 Homo sapiens chromosome 15 clone RP11-31H5 map 15q21.3, complete
             sequence
          Length = 185446

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   ttatggaaaattggaaatta 227
             ||||||||||||||||||||
Sbjct: 27176 ttatggaaaattggaaatta 27195
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 240      attacatgacatacacatacacac 263
                |||||||| |||||||||||||||
Sbjct: 18940332 attacatggcatacacatacacac 18940355
to top
>gb|AF309689.1|AF309689 Neurospora crassa chromosome 4 pdx-1 region
          Length = 36030

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 263   cacgaccaggatggagactgctgc 286
             |||||||| |||||||||||||||
Sbjct: 18272 cacgaccacgatggagactgctgc 18249
to top
>gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosome 17, complete
             sequence
          Length = 198374

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 242   tacatgacatacacatacacacac 265
             ||||| ||||||||||||||||||
Sbjct: 97916 tacatcacatacacatacacacac 97939
to top
>gb|AC009097.9| Homo sapiens chromosome 16 clone RP11-432I5, complete sequence
          Length = 199471

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 672    ttagaaatcttagtttctct 691
              ||||||||||||||||||||
Sbjct: 170179 ttagaaatcttagtttctct 170198
to top
>gb|AC153575.5| Mus musculus 6 BAC RP23-157O3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 215023

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 242    tacatgacatacacatacacacac 265
              ||||| ||||||||||||||||||
Sbjct: 184713 tacattacatacacatacacacac 184690
to top
>gb|AC113610.4| Homo sapiens BAC clone RP11-373H2 from 2, complete sequence
          Length = 96559

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   aagaagaaaaattacatgac 249
             ||||||||||||||||||||
Sbjct: 65371 aagaagaaaaattacatgac 65390
to top
>gb|AC135966.2| Homo sapiens chromosome 3 clone RP11-94D3, complete sequence
          Length = 162867

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   gatgcagtgctgccacaaaa 320
             ||||||||||||||||||||
Sbjct: 22211 gatgcagtgctgccacaaaa 22230
to top
>gb|AC093424.3| Homo sapiens chromosome 1 clone RP11-467C18, complete sequence
          Length = 153854

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   ggaaattatcaagaagaaaa 239
             ||||||||||||||||||||
Sbjct: 45818 ggaaattatcaagaagaaaa 45837
to top
>emb|BX005396.5| Zebrafish DNA sequence from clone CH211-128N12, complete sequence
          Length = 177531

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    atgacatacacatacacaca 264
              ||||||||||||||||||||
Sbjct: 161316 atgacatacacatacacaca 161335
to top
>gb|AC002477.1|AC002477 Human PAC clone RP3-327A19 from Xq25-q26, complete sequence
          Length = 124095

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 242    tacatgacatacacatacacacac 265
              ||||||||||||||| ||||||||
Sbjct: 120593 tacatgacatacacacacacacac 120570
to top
>gb|AC004827.1|AC004827 Homo sapiens PAC clone RP1-44L15 from Xq23, complete sequence
          Length = 129690

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   tgacatacacatacacacac 265
             ||||||||||||||||||||
Sbjct: 56104 tgacatacacatacacacac 56123
to top
>gb|U00066.1| Caenorhabditis elegans cosmid R12B2, complete sequence
          Length = 34646

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 248   acatacacatacacacacgaccag 271
             |||||||||||||||||| |||||
Sbjct: 33518 acatacacatacacacaccaccag 33541
to top
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 299     aggatgcagtgctgccacaa 318
               ||||||||||||||||||||
Sbjct: 2876412 aggatgcagtgctgccacaa 2876431
to top
>emb|BX537249.8| Zebrafish DNA sequence from clone DKEY-77B17 in linkage group 20,
             complete sequence
          Length = 92426

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   acatacacatacacacacga 267
             ||||||||||||||||||||
Sbjct: 53159 acatacacatacacacacga 53178
to top
>emb|AL954147.12| Zebrafish DNA sequence from clone CH211-117H23 in linkage group 24,
              complete sequence
          Length = 188067

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 243    acatgacatacacatacacacacg 266
              |||||| |||||||||||||||||
Sbjct: 177091 acatgaaatacacatacacacacg 177114
to top
>emb|AL837520.26| Mouse DNA sequence from clone RP23-412O4 on chromosome 2, complete
              sequence
          Length = 128625

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 243    acatgacatacacatacacacacg 266
              |||| |||||||||||||||||||
Sbjct: 103523 acatcacatacacatacacacacg 103500
to top
>emb|AL929284.12| Zebrafish DNA sequence from clone CH211-160H23 in linkage group 15,
             complete sequence
          Length = 179458

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 242   tacatgacatacacatacacacac 265
             ||||||||| ||||||||||||||
Sbjct: 75217 tacatgacacacacatacacacac 75194
to top
>gb|AC164611.3| Mus musculus BAC clone RP23-421C2 from chromosome 8, complete sequence
          Length = 188068

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   acatgacatacacatacaca 262
             ||||||||||||||||||||
Sbjct: 79803 acatgacatacacatacaca 79822
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 240      attacatgacatacacatacacac 263
                |||||||| |||||||||||||||
Sbjct: 19098981 attacatggcatacacatacacac 19099004
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>emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on chromosome 9, complete
             sequence
          Length = 192913

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   acatacacatacacacacga 267
             ||||||||||||||||||||
Sbjct: 60169 acatacacatacacacacga 60188
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>gb|AC148007.3| Mus musculus BAC clone RP23-273G4 from 1, complete sequence
          Length = 184937

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 242    tacatgacatacacatacacacac 265
              |||||| |||||||||||||||||
Sbjct: 141517 tacatgccatacacatacacacac 141494
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>emb|AL845300.11| Mouse DNA sequence from clone RP23-397A17 on chromosome 2, complete
            sequence
          Length = 224818

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 248  acatacacatacacacacga 267
            ||||||||||||||||||||
Sbjct: 6711 acatacacatacacacacga 6692
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>emb|AL691422.15| Mouse DNA sequence from clone RP23-85B20 on chromosome X, complete
              sequence
          Length = 164287

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 242    tacatgacatacacatacacacac 265
              |||||| |||||||||||||||||
Sbjct: 117246 tacatgccatacacatacacacac 117269
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>emb|CT010439.6| Mouse DNA sequence from clone RP23-26E8 on chromosome 13, complete
              sequence
          Length = 231247

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 242    tacatgacatacacatacacacac 265
              ||||||||| ||||||||||||||
Sbjct: 200617 tacatgacacacacatacacacac 200594
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>gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosome 9, complete sequence
          Length = 219361

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   acatacacatacacacacga 267
             ||||||||||||||||||||
Sbjct: 47845 acatacacatacacacacga 47864
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>emb|AL807240.12| Mouse DNA sequence from clone RP23-394F6 on chromosome X, complete
             sequence
          Length = 115145

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   gcagtgctgccacaaaactg 323
             ||||||||||||||||||||
Sbjct: 15205 gcagtgctgccacaaaactg 15186
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>gb|M84916.1|ONGACT1A Onchocerca volvulus actin 1 (actin-1A) gene, complete cds
          Length = 3126

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 663 atagatcaattagaaatctt 682
           ||||||||||||||||||||
Sbjct: 464 atagatcaattagaaatctt 445


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,256,415
Number of Sequences: 3902068
Number of extensions: 7256415
Number of successful extensions: 337989
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 337229
Number of HSP's gapped (non-prelim): 757
length of query: 715
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 692
effective length of database: 17,143,297,704
effective search space: 11863162011168
effective search space used: 11863162011168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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