ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasda09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000114.1| Streptococcus agalactiae A909, complete genome 46 0.14
2gb|AE014224.1| Streptococcus agalactiae 2603V/R section 34 of 10... 46 0.14
3emb|AL766846.1|SAG766846 Streptococcus agalactiae NEM316 complet... 46 0.14
4gb|AC157774.5| Mus musculus chromosome 8, clone RP23-423E20, com... 46 0.14
5gb|AC116607.5| Homo sapiens chromosome 18, clone RP11-323P22, co... 42 2.2
6gb|AC104956.6| Homo sapiens chromosome 18, clone RP11-646H8, com... 42 2.2
7gb|AC104367.6| Homo sapiens chromosome 18, clone RP11-126G14, co... 42 2.2
8gb|AC024341.9|AC024341 Homo sapiens chromosome 11, clone RP11-33... 42 2.2
9dbj|AB115504.1| Canine parvovirus gene for VP2, complete cds 42 2.2
10gb|AC006928.15|AC006928 Homo sapiens chromosome 4 clone C0440E08... 42 2.2
11gb|AC129329.3| Mus musculus BAC clone RP23-43M12 from 10, comple... 42 2.2
12emb|AL772261.5| Mouse DNA sequence from clone RP23-276J11 on chr... 42 2.2
13gb|AC102672.13| Mus musculus chromosome 14, clone RP23-181E7, co... 40 8.5
14gb|AC122562.8| Mus musculus chromosome 5, clone RP24-103L16, com... 40 8.5
15gb|AC105470.17| Rattus norvegicus 10 BAC CH230-192N7 (Children's... 40 8.5
16gb|AC108780.10| Mus musculus chromosome 14, clone RP23-445H16, c... 40 8.5
17gb|AC121825.3| Mus musculus BAC clone RP23-469H5 from chromosome... 40 8.5
18gb|AC122390.4| Mus musculus BAC clone RP24-80O9 from chromosome ... 40 8.5
19emb|AL033533.5|HS973M2 Human DNA sequence from clone RP5-973M2 o... 40 8.5
20ref|XM_964895.1| PREDICTED: Tribolium castaneum similar to CG539... 40 8.5
21gb|AC162519.4| Mus musculus chromosome 8, clone RP24-146M21, com... 40 8.5
22dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 40 8.5
23gb|DP000062.1| Sus scrofa target 117 genomic scaffold 40 8.5
24gb|AC114301.2| Homo sapiens chromosome 5 clone RP11-143L23, comp... 40 8.5
25gb|AC110721.1| Homo sapiens chromosome 5 clone RP11-520E18, comp... 40 8.5
26gb|AC090427.2| Homo sapiens chromosome 19 clone CTD-2292J18, com... 40 8.5
27gb|AC016556.8| Homo sapiens chromosome 5 clone CTC-369A16, compl... 40 8.5
28gb|AC024121.5| Homo sapiens chromosome 5 clone CTB-2J5, complete... 40 8.5
29gb|AC022449.5| Homo sapiens chromosome 5 clone RP11-93O7, comple... 40 8.5
30dbj|AK052152.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 8.5
31gb|AC008800.5|AC008800 Homo sapiens chromosome 5 clone CTD-2062D... 40 8.5
32gb|AC008527.5|AC008527 Homo sapiens chromosome 5 clone CTC-471D1... 40 8.5
33tpg|BK000438.1| TPA: TPA_exp: Homo sapiens RING finger protein C... 40 8.5
34dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
35dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
36dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
37gb|AC002427.1|AC002427 Homo sapiens BAC clone GS1-11E15 from 5q3... 40 8.5
38emb|BX539332.13| Zebrafish DNA sequence from clone RP71-23D18 in... 40 8.5
39emb|AL929032.10| Zebrafish DNA sequence from clone DKEY-4C23 in ... 40 8.5
40emb|AL590148.8| Zebrafish DNA sequence from clone RP71-30I22 in ... 40 8.5
41emb|AM233362.1| Francisella tularensis subsp. holarctica strain ... 40 8.5
42emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4... 40 8.5
43emb|CT025645.16| Mouse DNA sequence from clone RP23-233D21 on ch... 40 8.5
44emb|BX248330.6| Zebrafish DNA sequence from clone CH211-278E17 i... 40 8.5
45emb|AL359265.8| Human DNA sequence from clone RP11-195C7 on chro... 40 8.5
46dbj|AP003780.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.5
47dbj|AP006696.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 8.5 
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 526    atgctagcagctaagacaacaga 548
              |||||||||||||||||||||||
Sbjct: 785883 atgctagcagctaagacaacaga 785905
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>gb|AE014224.1| Streptococcus agalactiae 2603V/R section 34 of 100 of the complete
            genome
          Length = 21253

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 526  atgctagcagctaagacaacaga 548
            |||||||||||||||||||||||
Sbjct: 2652 atgctagcagctaagacaacaga 2674
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>emb|AL766846.1|SAG766846 Streptococcus agalactiae NEM316 complete genome, segment 4
          Length = 224050

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 526    atgctagcagctaagacaacaga 548
              |||||||||||||||||||||||
Sbjct: 145314 atgctagcagctaagacaacaga 145336
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>gb|AC157774.5| Mus musculus chromosome 8, clone RP23-423E20, complete sequence
          Length = 198967

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 404    acccaaatataagtcaggagagg 426
              |||||||||||||||||||||||
Sbjct: 130157 acccaaatataagtcaggagagg 130179
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>gb|AC116607.5| Homo sapiens chromosome 18, clone RP11-323P22, complete sequence
          Length = 179986

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 409   aatataagtcaggagaggatcacaa 433
             |||||| ||||||||||||||||||
Sbjct: 17738 aatatatgtcaggagaggatcacaa 17762
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>gb|AC104956.6| Homo sapiens chromosome 18, clone RP11-646H8, complete sequence
          Length = 157587

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 409   aatataagtcaggagaggatcacaa 433
             |||||| ||||||||||||||||||
Sbjct: 79232 aatatatgtcaggagaggatcacaa 79256
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>gb|AC104367.6| Homo sapiens chromosome 18, clone RP11-126G14, complete sequence
          Length = 163931

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 409    aatataagtcaggagaggatcacaa 433
              |||||| ||||||||||||||||||
Sbjct: 112448 aatatatgtcaggagaggatcacaa 112424
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>gb|AC024341.9|AC024341 Homo sapiens chromosome 11, clone RP11-336F14, complete sequence
          Length = 165260

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 364   taatccctaacctctttttgcatat 388
             ||||||||||||||||||| |||||
Sbjct: 83104 taatccctaacctcttttttcatat 83128
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>dbj|AB115504.1| Canine parvovirus gene for VP2, complete cds
          Length = 1755

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 37  atgtacaagtctacttgagtt 57
           |||||||||||||||||||||
Sbjct: 210 atgtacaagtctacttgagtt 190
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>gb|AC006928.15|AC006928 Homo sapiens chromosome 4 clone C0440E08, complete sequence
          Length = 169468

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 103   ttttacaagttgccaaattaaaata 127
             ||||| |||||||||||||||||||
Sbjct: 76455 ttttagaagttgccaaattaaaata 76431
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>gb|AC129329.3| Mus musculus BAC clone RP23-43M12 from 10, complete sequence
          Length = 176092

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 296    atggcaatttgtttgttcaag 316
              |||||||||||||||||||||
Sbjct: 131409 atggcaatttgtttgttcaag 131389
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>emb|AL772261.5| Mouse DNA sequence from clone RP23-276J11 on chromosome 4, complete
              sequence
          Length = 191041

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 20     gcatgaatgaaactgacatgt 40
              |||||||||||||||||||||
Sbjct: 169606 gcatgaatgaaactgacatgt 169626
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>gb|AC102672.13| Mus musculus chromosome 14, clone RP23-181E7, complete sequence
          Length = 208396

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   agtcaggagaggatcacaag 434
             ||||||||||||||||||||
Sbjct: 29861 agtcaggagaggatcacaag 29842
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>gb|AC122562.8| Mus musculus chromosome 5, clone RP24-103L16, complete sequence
          Length = 172210

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   tacaagttgccaaattaaaa 125
             ||||||||||||||||||||
Sbjct: 67090 tacaagttgccaaattaaaa 67109
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>gb|AC105470.17| Rattus norvegicus 10 BAC CH230-192N7 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 212491

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 490   caaccacaagaaggaggaag 509
             ||||||||||||||||||||
Sbjct: 16720 caaccacaagaaggaggaag 16701
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>gb|AC108780.10| Mus musculus chromosome 14, clone RP23-445H16, complete sequence
          Length = 196236

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    agtcaggagaggatcacaag 434
              ||||||||||||||||||||
Sbjct: 160904 agtcaggagaggatcacaag 160885
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>gb|AC121825.3| Mus musculus BAC clone RP23-469H5 from chromosome 3, complete sequence
          Length = 174974

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      aatgagaatatccgcatgaa 26
              ||||||||||||||||||||
Sbjct: 115868 aatgagaatatccgcatgaa 115887
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>gb|AC122390.4| Mus musculus BAC clone RP24-80O9 from chromosome 10, complete sequence
          Length = 218880

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 576   gcactgggttttttcagttg 595
             ||||||||||||||||||||
Sbjct: 77574 gcactgggttttttcagttg 77555
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>emb|AL033533.5|HS973M2 Human DNA sequence from clone RP5-973M2 on chromosome 1q24.3-31.1
             Contains the PTGS2 gene for prostaglandin-endoperoxide
             synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
             and a CpG island, complete sequence
          Length = 84412

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   tctgaaaatcaattctatac 228
             ||||||||||||||||||||
Sbjct: 19804 tctgaaaatcaattctatac 19785
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>ref|XM_964895.1| PREDICTED: Tribolium castaneum similar to CG5397-PA (LOC658512), mRNA
          Length = 1983

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 501  aggaggaagcaagaaaccac 520
            ||||||||||||||||||||
Sbjct: 1890 aggaggaagcaagaaaccac 1909
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>gb|AC162519.4| Mus musculus chromosome 8, clone RP24-146M21, complete sequence
          Length = 150115

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    cagacttattttacaagttg 114
             ||||||||||||||||||||
Sbjct: 82003 cagacttattttacaagttg 81984
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>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence
          Length = 1877212

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    aagaacatcacttctgaaaa 216
              ||||||||||||||||||||
Sbjct: 543577 aagaacatcacttctgaaaa 543558
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>gb|DP000062.1| Sus scrofa target 117 genomic scaffold
          Length = 605739

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 547   gaagcttcttcaatagatca 566
             ||||||||||||||||||||
Sbjct: 91459 gaagcttcttcaatagatca 91440
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>gb|AC114301.2| Homo sapiens chromosome 5 clone RP11-143L23, complete sequence
          Length = 162976

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 218   caattctataccaacaaatcggaa 241
             ||||||||||||||||||| ||||
Sbjct: 35280 caattctataccaacaaattggaa 35303
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>gb|AC110721.1| Homo sapiens chromosome 5 clone RP11-520E18, complete sequence
          Length = 164525

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 218   caattctataccaacaaatcggaa 241
             ||||||||||||||||||| ||||
Sbjct: 63213 caattctataccaacaaattggaa 63190
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>gb|AC090427.2| Homo sapiens chromosome 19 clone CTD-2292J18, complete sequence
          Length = 109233

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 57    tgaaaagtatacaatcagcagtag 80
             ||||||||||||||| ||||||||
Sbjct: 14876 tgaaaagtatacaataagcagtag 14853
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>gb|AC016556.8| Homo sapiens chromosome 5 clone CTC-369A16, complete sequence
          Length = 136791

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 205    cacttctgaaaatcaattctatac 228
              ||||||| ||||||||||||||||
Sbjct: 123681 cacttctaaaaatcaattctatac 123704
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>gb|AC024121.5| Homo sapiens chromosome 5 clone CTB-2J5, complete sequence
          Length = 132728

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 205   cacttctgaaaatcaattctatac 228
             ||||||| ||||||||||||||||
Sbjct: 41772 cacttctaaaaatcaattctatac 41749
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>gb|AC022449.5| Homo sapiens chromosome 5 clone RP11-93O7, complete sequence
          Length = 161121

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 205    cacttctgaaaatcaattctatac 228
              ||||||| ||||||||||||||||
Sbjct: 129762 cacttctaaaaatcaattctatac 129739
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>dbj|AK052152.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330001E03 product:unclassifiable, full
            insert sequence
          Length = 4323

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 78   tagtcatcaaatttagccagactt 101
            ||||||||||| ||||||||||||
Sbjct: 4122 tagtcatcaaacttagccagactt 4145
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>gb|AC008800.5|AC008800 Homo sapiens chromosome 5 clone CTD-2062D19, complete sequence
          Length = 85119

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    aaatttagccagacttattt 105
             ||||||||||||||||||||
Sbjct: 61956 aaatttagccagacttattt 61975
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>gb|AC008527.5|AC008527 Homo sapiens chromosome 5 clone CTC-471D10, complete sequence
          Length = 132063

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 205   cacttctgaaaatcaattctatac 228
             ||||||| ||||||||||||||||
Sbjct: 16448 cacttctaaaaatcaattctatac 16425
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>tpg|BK000438.1| TPA: TPA_exp: Homo sapiens RING finger protein COP1 gene, complete cds
          Length = 421987

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 407    caaatataagtcaggagagg 426
              ||||||||||||||||||||
Sbjct: 101038 caaatataagtcaggagagg 101019
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 27       tgaaactgacatgtacaagt 46
                ||||||||||||||||||||
Sbjct: 10795650 tgaaactgacatgtacaagt 10795631
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>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0512H04
          Length = 151049

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    tgaaactgacatgtacaagt 46
             ||||||||||||||||||||
Sbjct: 19373 tgaaactgacatgtacaagt 19354
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>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0085I16
          Length = 141701

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     tgaaactgacatgtacaagt 46
              ||||||||||||||||||||
Sbjct: 132268 tgaaactgacatgtacaagt 132249
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>gb|AC002427.1|AC002427 Homo sapiens BAC clone GS1-11E15 from 5q31, complete sequence
          Length = 101098

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 218   caattctataccaacaaatcggaa 241
             ||||||||||||||||||| ||||
Sbjct: 98086 caattctataccaacaaattggaa 98063
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>emb|BX539332.13| Zebrafish DNA sequence from clone RP71-23D18 in linkage group 22,
              complete sequence
          Length = 176625

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    attttacaagttgccaaatt 121
              ||||||||||||||||||||
Sbjct: 132365 attttacaagttgccaaatt 132384
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>emb|AL929032.10| Zebrafish DNA sequence from clone DKEY-4C23 in linkage group 22,
            complete sequence
          Length = 236775

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  attttacaagttgccaaatt 121
            ||||||||||||||||||||
Sbjct: 3533 attttacaagttgccaaatt 3552
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>emb|AL590148.8| Zebrafish DNA sequence from clone RP71-30I22 in linkage group 8 Contains
              part of a novel gene for a protein similar to human
              FLJ12550, the pim1 gene for pim-1 oncogene (proviral
              integration site 1), part of a novel gene for a protein
              similar to vertebrate UDP-galactose transporters, a novel
              gene for a protein similar to vertebrate caldesmon 1
              (CALD1) and a CpG island, complete sequence
          Length = 140984

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 348    ttttggtataaagcgttaat 367
              ||||||||||||||||||||
Sbjct: 109105 ttttggtataaagcgttaat 109086
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>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 265     aatcaaagacatgatgagga 284
               ||||||||||||||||||||
Sbjct: 1381686 aatcaaagacatgatgagga 1381667
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>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    aatcaaagacatgatgagga 284
              ||||||||||||||||||||
Sbjct: 790865 aatcaaagacatgatgagga 790884
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>emb|CT025645.16| Mouse DNA sequence from clone RP23-233D21 on chromosome 13, complete
              sequence
          Length = 225179

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 78     tagtcatcaaatttagccagactt 101
              ||||||||||| ||||||||||||
Sbjct: 137876 tagtcatcaaacttagccagactt 137899
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>emb|BX248330.6| Zebrafish DNA sequence from clone CH211-278E17 in linkage group 22,
             complete sequence
          Length = 189880

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   attttacaagttgccaaatt 121
             ||||||||||||||||||||
Sbjct: 69501 attttacaagttgccaaatt 69520
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>emb|AL359265.8| Human DNA sequence from clone RP11-195C7 on chromosome 1 Contains the
             5' end of the gene for constitutive photomorphogenic
             protein (COP1), a novel gene, a ribosomal protein L13
             (RPL13) pseudogene, a novel pseudogene and a CpG island,
             complete sequence
          Length = 155805

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   caaatataagtcaggagagg 426
             ||||||||||||||||||||
Sbjct: 54768 caaatataagtcaggagagg 54787
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>dbj|AP003780.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-472L10, complete
             sequence
          Length = 122351

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   gaaggaggaagcaagaaacc 518
             ||||||||||||||||||||
Sbjct: 81274 gaaggaggaagcaagaaacc 81255
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>dbj|AP006696.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT17N21, TM0403,
            complete sequence
          Length = 97807

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 332  cttcaactctccattgttttggta 355
            |||||||||||| |||||||||||
Sbjct: 1988 cttcaactctcctttgttttggta 2011


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,635,349
Number of Sequences: 3902068
Number of extensions: 6635349
Number of successful extensions: 128481
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128270
Number of HSP's gapped (non-prelim): 211
length of query: 626
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 603
effective length of database: 17,143,297,704
effective search space: 10337408515512
effective search space used: 10337408515512
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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