ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd3p24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF475123.1| Triticum aestivum acidic ribosomal protein P2a-2 mRNA, partial cds Length = 339 Score = 599 bits (302), Expect = e-168 Identities = 329/338 (97%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctct 254 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 338 tagtcgaacagactgaagcccatgtcatcatcactctcttccttctccacgaccttctct 279 Query: 255 tctttctttgactcagctgcaggggcagcagcacctccagcagagggagcagcagctgaa 314 ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 278 tctttctttgactcagctgcaggggcagcagcacctccagcagcaggggcagcagctgaa 219 Query: 315 acagccacgccaccaccaccagatggaaccgcagcaaacttctccctgccagcagccaag 374 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 218 acagccacaccaccaccaccagatggaaccgcagcaaacttctccctaccagcagccaag 159 Query: 375 agctcggtgatgtccttgcccttcacttggcacagcatgagttccatcttctcattgtca 434 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 158 agctcggtgatgtccttgcccttcacttgggacagcatgagttccatcttctcattgtca 99 Query: 435 atttcacaaccaacagactcaagaatggatgtcaggtcctctgcagaggggctggcgttg 494 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98 atttcacaaccaactgactcaagaatggatgtcaggtcctctgcagaggggctggcgttg 39 Query: 495 ccagagaggtaagcaagcagataggcagcaatgaactt 532 |||||||||||||||||||||||||||||||||||||| Sbjct: 38 ccagagaggtaagcaagcagataggcagcaatgaactt 1
>gb|AF475097.1| Triticum aestivum acidic ribosomal protein P2 mRNA, partial cds Length = 339 Score = 599 bits (302), Expect = e-168 Identities = 329/338 (97%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctct 254 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 338 tagtcgaacagactgaagcccatgtcatcatcactctcttccttctccacgaccttctct 279 Query: 255 tctttctttgactcagctgcaggggcagcagcacctccagcagagggagcagcagctgaa 314 ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 278 tctttctttgactcagctgcaggggcagcagcacctccagcagcaggggcagcagctgaa 219 Query: 315 acagccacgccaccaccaccagatggaaccgcagcaaacttctccctgccagcagccaag 374 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 218 acagccacaccaccaccaccagatggaaccgcagcaaacttctccctaccagcagccaag 159 Query: 375 agctcggtgatgtccttgcccttcacttggcacagcatgagttccatcttctcattgtca 434 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 158 agctcggtgatgtccttgcccttcacttgggacagcatgagttccatcttctcattgtca 99 Query: 435 atttcacaaccaacagactcaagaatggatgtcaggtcctctgcagaggggctggcgttg 494 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98 atttcacaaccaactgactcaagaatggatgtcaggtcctctgcagaggggctggcgttg 39 Query: 495 ccagagaggtaagcaagcagataggcagcaatgaactt 532 |||||||||||||||||||||||||||||||||||||| Sbjct: 38 ccagagaggtaagcaagcagataggcagcaatgaactt 1
>dbj|AK058815.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-F04, full insert sequence Length = 693 Score = 246 bits (124), Expect = 7e-62 Identities = 294/350 (84%), Gaps = 3/350 (0%) Strand = Plus / Minus Query: 196 agtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctctt 255 |||| |||| |||||||||||||||||| || || ||||||||||| ||||||| |||| Sbjct: 433 agtcaaacaaactgaagcccatgtcatcatcactttcttccttctcttcgaccttatctt 374 Query: 256 ctttctttgactcagctgcaggggcagca---gcacctccagcagagggagcagcagctg 312 ||||||| | |||||||||||| ||| || ||||| || |||| ||||||||||| | Sbjct: 373 ctttcttcgcctcagctgcaggagcaccaccagcaccaccggcagcaggagcagcagcag 314 Query: 313 aaacagccacgccaccaccaccagatggaaccgcagcaaacttctccctgccagcagcca 372 |||||| || |||||||||||||||||||| | ||||||||||||||||||| ||| | Sbjct: 313 caacagctacaccaccaccaccagatggaactgaagcaaacttctccctgccacaagcga 254 Query: 373 agagctcggtgatgtccttgcccttcacttggcacagcatgagttccatcttctcattgt 432 |||||| |||||||||||||| ||||||| ||| || |||||||||||| |||||| Sbjct: 253 tgagctcagtgatgtccttgccactcacttgagacaacaggagttccatctttgcattgt 194 Query: 433 caatttcacaaccaacagactcaagaatggatgtcaggtcctctgcagaggggctggcgt 492 | |||||||||||||| ||||| ||||| | ||||| ||||| |||| |||||||| || Sbjct: 193 cgatttcacaaccaactgactccagaatcgttgtcaaatcctccgcagtggggctggagt 134 Query: 493 tgccagagaggtaagcaagcagataggcagcaatgaacttcatcttggat 542 |||||| || || || | ||||||||||| ||||||||||||| ||||| Sbjct: 133 tgccagccagataggccatcagataggcagaaatgaacttcatcctggat 84
>ref|NM_189662.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 408 Score = 242 bits (122), Expect = 1e-60 Identities = 289/344 (84%), Gaps = 3/344 (0%) Strand = Plus / Minus Query: 196 agtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctctt 255 |||| |||| |||||||||||||||||| || || ||||||||||| ||||||| |||| Sbjct: 406 agtcaaacaaactgaagcccatgtcatcatcactttcttccttctcttcgaccttatctt 347 Query: 256 ctttctttgactcagctgcaggggcagca---gcacctccagcagagggagcagcagctg 312 ||||||| | |||||||||||| ||| || ||||| || |||| ||||||||||| | Sbjct: 346 ctttcttcgcctcagctgcaggagcaccaccagcaccaccggcagcaggagcagcagcag 287 Query: 313 aaacagccacgccaccaccaccagatggaaccgcagcaaacttctccctgccagcagcca 372 |||||| || |||||||||||||||||||| | ||||||||||||||||||| ||| | Sbjct: 286 caacagctacaccaccaccaccagatggaactgaagcaaacttctccctgccacaagcga 227 Query: 373 agagctcggtgatgtccttgcccttcacttggcacagcatgagttccatcttctcattgt 432 |||||| |||||||||||||| ||||||| ||| || |||||||||||| |||||| Sbjct: 226 tgagctcagtgatgtccttgccactcacttgagacaacaggagttccatctttgcattgt 167 Query: 433 caatttcacaaccaacagactcaagaatggatgtcaggtcctctgcagaggggctggcgt 492 | |||||||||||||| ||||| ||||| | ||||| ||||| |||| |||||||| || Sbjct: 166 cgatttcacaaccaactgactccagaatcgttgtcaaatcctccgcagtggggctggagt 107 Query: 493 tgccagagaggtaagcaagcagataggcagcaatgaacttcatc 536 |||||| || || || | ||||||||||| ||||||||||||| Sbjct: 106 tgccagccagataggccatcagataggcagaaatgaacttcatc 63
>emb|X86553.1|ZMRNARPP2 Z.mays mRNA for 60S acidic ribosomal protein Length = 544 Score = 224 bits (113), Expect = 2e-55 Identities = 286/343 (83%), Gaps = 3/343 (0%) Strand = Plus / Minus Query: 194 ctagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctc 253 ||||||||| || ||||||||||| ||||| ||||| ||||||||||| | |||||||| Sbjct: 381 ctagtcgaagaggctgaagcccatatcatcatcgctttcttccttctcttccaccttctc 322 Query: 254 ttctttctttgactcagctgcaggggcagcagcacctccagcagagggagcagcagctga 313 ||||||||||| |||||||||||| |||||| || ||||||| || ||||| || | Sbjct: 321 ttctttctttgcctcagctgcagg---agcagctccgccagcagcaggtgcagctgccgc 265 Query: 314 aacagccacgccaccaccaccagatggaaccgcagcaaacttctccctgccagcagccaa 373 |||||| || || || |||||| |||| || | |||||||||||||||||| || || | Sbjct: 264 aacagcgacaccgccgccaccacatgggactgaagcaaacttctccctgcccgcggcaat 205 Query: 374 gagctcggtgatgtccttgcccttcacttggcacagcatgagttccatcttctcattgtc 433 |||||||||||||||||| || ||| |||| |||||| |||||||||||| |||||||| Sbjct: 204 gagctcggtgatgtccttaccgctcagttgggacagcaggagttccatcttttcattgtc 145 Query: 434 aatttcacaaccaacagactcaagaatggatgtcaggtcctctgcagaggggctggcgtt 493 || |||||| ||||| ||||| ||||||| |||| || || || |||||||||||||| Sbjct: 144 aacttcacagccaactgactccagaatggcagtcaaatcgtcagcggaggggctggcgtt 85 Query: 494 gccagagaggtaagcaagcagataggcagcaatgaacttcatc 536 |||| |||| ||||||||| |||||||||| ||||||||| Sbjct: 84 cccagcgaggacagcaagcaggtaggcagcaacaaacttcatc 42
>gb|AY103566.1| Zea mays PCO075293 mRNA sequence Length = 812 Score = 216 bits (109), Expect = 6e-53 Identities = 285/343 (83%), Gaps = 3/343 (0%) Strand = Plus / Minus Query: 194 ctagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctc 253 ||||||||| || ||||||||||| ||||| ||||| ||||||||||| | |||||||| Sbjct: 500 ctagtcgaagaggctgaagcccatatcatcatcgctttcttccttctcttccaccttctc 441 Query: 254 ttctttctttgactcagctgcaggggcagcagcacctccagcagagggagcagcagctga 313 ||||||||||| ||||||||||| |||||| || ||||||| || ||||| || | Sbjct: 440 ttctttctttgcctcagctgcaga---agcagctccgccagcagcaggtgcagctgccgc 384 Query: 314 aacagccacgccaccaccaccagatggaaccgcagcaaacttctccctgccagcagccaa 373 |||||| || || || |||||| |||| || | |||||||||||||||||| || || | Sbjct: 383 aacagcgacaccgccgccaccacatgggactgaagcaaacttctccctgcccgcggcaat 324 Query: 374 gagctcggtgatgtccttgcccttcacttggcacagcatgagttccatcttctcattgtc 433 |||||||||||||||||| || ||| |||| |||||| |||||||||||| |||||||| Sbjct: 323 gagctcggtgatgtccttaccgctcagttgggacagcaggagttccatcttttcattgtc 264 Query: 434 aatttcacaaccaacagactcaagaatggatgtcaggtcctctgcagaggggctggcgtt 493 || |||||| ||||| ||||| ||||||| |||| || || || |||||||||||||| Sbjct: 263 aacttcacagccaactgactccagaatggcagtcaaatcgtcagcggaggggctggcgtt 204 Query: 494 gccagagaggtaagcaagcagataggcagcaatgaacttcatc 536 |||| |||| ||||||||| |||||||||| ||||||||| Sbjct: 203 cccagcgaggacagcaagcaggtaggcagcaacaaacttcatc 161
>gb|U62748.1|ZMU62748 Zea mays acidic ribosomal protein P2a-2 (rpp2a-2) mRNA, complete cds Length = 625 Score = 208 bits (105), Expect = 1e-50 Identities = 284/343 (82%), Gaps = 3/343 (0%) Strand = Plus / Minus Query: 194 ctagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctc 253 ||||||||| || ||||||||||| ||||| ||||| ||||||||||| | |||||||| Sbjct: 391 ctagtcgaagaggctgaagcccatatcatcatcgctttcttccttctcttccaccttctc 332 Query: 254 ttctttctttgactcagctgcaggggcagcagcacctccagcagagggagcagcagctga 313 ||||||||||| |||||||| ||| |||||| || ||||||| || | ||| || | Sbjct: 331 ttctttctttgcctcagctgtagg---agcagctccgccagcagcaggtgaagctgccgc 275 Query: 314 aacagccacgccaccaccaccagatggaaccgcagcaaacttctccctgccagcagccaa 373 |||||| || ||||| |||||| |||| || | |||||||||||||||||| || || | Sbjct: 274 aacagcgacaccaccgccaccacatgggactgaagcaaacttctccctgcccgcggcaat 215 Query: 374 gagctcggtgatgtccttgcccttcacttggcacagcatgagttccatcttctcattgtc 433 |||||||||||||||||| || ||| |||| |||||| |||||||||| | |||||||| Sbjct: 214 gagctcggtgatgtccttaccgctcagttgggacagcaggagttccatcctttcattgtc 155 Query: 434 aatttcacaaccaacagactcaagaatggatgtcaggtcctctgcagaggggctggcgtt 493 || |||||| ||||| ||||| ||||||| |||| ||||| || |||||||||||||| Sbjct: 154 aacttcacagccaactgactccagaatggcagtcaaatcctcagcggaggggctggcgtt 95 Query: 494 gccagagaggtaagcaagcagataggcagcaatgaacttcatc 536 |||| |||| |||||||| |||||||||| ||||||||| Sbjct: 94 cccagcgaggacagcaagcaagtaggcagcaacaaacttcatc 52
>gb|U29383.1|ZMU29383 Zea mays acidic ribosomal protein P2 (RPA-2A1) mRNA, complete cds Length = 601 Score = 208 bits (105), Expect = 1e-50 Identities = 284/343 (82%), Gaps = 3/343 (0%) Strand = Plus / Minus Query: 194 ctagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctc 253 ||||||||| || ||||||||||| ||||| ||||| ||||||||||| | |||||||| Sbjct: 394 ctagtcgaagaggctgaagcccatatcatcatcgctttcttccttctcttccaccttctc 335 Query: 254 ttctttctttgactcagctgcaggggcagcagcacctccagcagagggagcagcagctga 313 ||||||||||| |||||||||||| |||| || ||||||| || ||||| || | Sbjct: 334 ttctttctttgcctcagctgcagg---agcacgtccgccagcagcaggtgcagctgccgc 278 Query: 314 aacagccacgccaccaccaccagatggaaccgcagcaaacttctccctgccagcagccaa 373 |||||| || || || |||||| |||| || | |||||||||||||||||| || || | Sbjct: 277 aacagcgacaccgccgccaccacatgggactgaagcaaacttctccctgcccgcggcaat 218 Query: 374 gagctcggtgatgtccttgcccttcacttggcacagcatgagttccatcttctcattgtc 433 |||||||||||||||||| || ||| |||| |||||| |||||||||||| |||||||| Sbjct: 217 gagctcggtgatgtccttaccgctcagttgggacagcaggagttccatcttttcattgtc 158 Query: 434 aatttcacaaccaacagactcaagaatggatgtcaggtcctctgcagaggggctggcgtt 493 || |||||| ||||| ||||| ||||||| |||| || || || |||||||||||||| Sbjct: 157 aacttcacagccaactgactccagaatggcagtcaaatcgtcagcggaggggctggcgtt 98 Query: 494 gccagagaggtaagcaagcagataggcagcaatgaacttcatc 536 |||| |||| ||||||||| |||||||||| ||||||||| Sbjct: 97 cccagcgaggacagcaagcaggtaggcagcaacaaacttcatc 55
>gb|BT018926.1| Zea mays clone Contig52.F mRNA sequence Length = 699 Score = 198 bits (100), Expect = 1e-47 Identities = 284/344 (82%), Gaps = 6/344 (1%) Strand = Plus / Minus Query: 196 agtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctctt 255 ||||||| || ||||||||||||||||| |||||||||||||||||| | |||||||||| Sbjct: 433 agtcgaagaggctgaagcccatgtcatcatcgctctcttccttctcctccaccttctctt 374 Query: 256 ctttctttgactcagctgcaggggcagcagcacctccagcagagggagcagcagctgaaa 315 ||||||| | |||||||||||| |||||| || ||||||| || |||| |||| | Sbjct: 373 ctttcttcgcctcagctgcagg---agcagctccgccagcagcagggccagctgctgcca 317 Query: 316 cagcca---cgccaccaccaccagatggaaccgcagcaaacttctccctgccagcagcca 372 |||||| |||| || || || |||| || | |||||||||||||||||| ||||| | Sbjct: 316 cagccataccgccgccgccgccgcatgggactgaagcaaacttctccctgcccgcagcaa 257 Query: 373 agagctcggtgatgtccttgcccttcacttggcacagcatgagttccatcttctcattgt 432 ||||||||| |||||||| || ||| |||| |||||| ||| |||||||| ||||||| Sbjct: 256 tgagctcggtaatgtccttaccgctcagttgggacagcaggagctccatcttttcattgt 197 Query: 433 caatttcacaaccaacagactcaagaatggatgtcaggtcctctgcagaggggctggcgt 492 ||| |||||| ||||| ||||| ||||||| |||| |||||| ||||||||||||| || Sbjct: 196 caacttcacagccaactgactccagaatggccgtcaagtcctcagcagaggggctggagt 137 Query: 493 tgccagagaggtaagcaagcagataggcagcaatgaacttcatc 536 | |||| ||| ||||||||| || ||||||| ||||||||| Sbjct: 136 tcccagcaaggacagcaagcaggtaagcagcaacaaacttcatc 93
>gb|U62749.1|ZMU62749 Zea mays acidic ribosomal protein P2a-3 (rpp2a-3) mRNA, partial cds Length = 465 Score = 194 bits (98), Expect = 2e-46 Identities = 255/306 (83%), Gaps = 6/306 (1%) Strand = Plus / Minus Query: 196 agtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctctt 255 ||||||| || |||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 318 agtcgaagaggctgaagcccatgtcatcgtcgctctcttccttctcctccaccttctctt 259 Query: 256 ctttctttgactcagctgcaggggcagcagcacctccagcagagggagcagcagctgaaa 315 ||||||| | |||||||||||| |||||| || ||||||| || |||| |||| | Sbjct: 258 ctttcttcgcctcagctgcagg---agcagctccgccagcagcagggccagctgctgcca 202 Query: 316 cagcca---cgccaccaccaccagatggaaccgcagcaaacttctccctgccagcagcca 372 |||||| |||| || || || |||| || | |||||||||||||||||| ||||| | Sbjct: 201 cagccataccgccgccgccgccgcatgggactgaagcaaacttctccctgcccgcagcaa 142 Query: 373 agagctcggtgatgtccttgcccttcacttggcacagcatgagttccatcttctcattgt 432 ||||||||| |||||||| || ||| |||| |||||| ||| |||||||| ||||||| Sbjct: 141 tgagctcggtaatgtccttaccgctcagttgggacagcaggagctccatcttttcattgt 82 Query: 433 caatttcacaaccaacagactcaagaatggatgtcaggtcctctgcagaggggctggcgt 492 ||| |||||| ||||| ||||| ||||||| |||| |||||| ||||||||||||| || Sbjct: 81 caacttcacagccaactgactccagaatggccgtcaagtcctcagcagaggggctggagt 22 Query: 493 tgccag 498 | |||| Sbjct: 21 tcccag 16
>gb|U62750.1|ZMU62750 Zea mays acidic ribosomal protein P2a-4 (rpp2a-4) mRNA, partial cds Length = 497 Score = 167 bits (84), Expect = 5e-38 Identities = 237/288 (82%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctct 254 |||||||| || |||||||||||||| || || || |||||||||||| | ||||||||| Sbjct: 288 tagtcgaagaggctgaagcccatgtcgtcatcactttcttccttctcctccaccttctct 229 Query: 255 tctttctttgactcagctgcaggggcagcagcacctccagcagagggagcagcagctgaa 314 |||||||| | |||||||||||| || | | || ||||||| || ||||| || | Sbjct: 228 tctttcttcgcctcagctgcaggagcgccgccgccgccagcagcaggggcagctgccgcg 169 Query: 315 acagccacgccaccaccaccagatggaaccgcagcaaacttctccctgccagcagccaag 374 |||||||| || ||||| ||| |||| || | |||||||||||||||||| || || | | Sbjct: 168 acagccacaccgccaccgccacatgggactgaagcaaacttctccctgccggcggcaatg 109 Query: 375 agctcggtgatgtccttgcccttcacttggcacagcatgagttccatcttctcattgtca 434 |||||||| |||||||| || ||| ||| |||| | |||||||||||| ||||||||| Sbjct: 108 agctcggtaatgtccttaccgctcagctgggacagaaggagttccatcttttcattgtca 49 Query: 435 atttcacaaccaacagactcaagaatggatgtcaggtcctctgcagag 482 | |||||| ||||| ||||| ||||||||||||| |||||| |||||| Sbjct: 48 acttcacagccaactgactccagaatggatgtcaagtcctcggcagag 1
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 165 bits (83), Expect = 2e-37 Identities = 187/221 (84%), Gaps = 3/221 (1%) Strand = Plus / Minus Query: 231 tcttccttctccacgaccttctcttctttctttgactcagctgcaggggcagca---gca 287 ||||||||||| ||||||| ||||||||||| | |||||||||||| ||| || ||| Sbjct: 4852874 tcttccttctcttcgaccttatcttctttcttcgcctcagctgcaggagcaccaccagca 4852815 Query: 288 cctccagcagagggagcagcagctgaaacagccacgccaccaccaccagatggaaccgca 347 || || |||| ||||||||||| | |||||| || |||||||||||||||||||| | | Sbjct: 4852814 ccaccggcagcaggagcagcagcagcaacagctacaccaccaccaccagatggaactgaa 4852755 Query: 348 gcaaacttctccctgccagcagccaagagctcggtgatgtccttgcccttcacttggcac 407 |||||||||||||||||| ||| | |||||| |||||||||||||| ||||||| || Sbjct: 4852754 gcaaacttctccctgccacaagcgatgagctcagtgatgtccttgccactcacttgagac 4852695 Query: 408 agcatgagttccatcttctcattgtcaatttcacaaccaac 448 | || |||||||||||| ||||||| |||||||||||||| Sbjct: 4852694 aacaggagttccatctttgcattgtcgatttcacaaccaac 4852654 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 450 gactcaagaatggatgtcaggtcctctgcagaggggctggcgttgccagagaggtaagca 509 ||||| ||||| | ||||| ||||| |||| |||||||| |||||||| || || || Sbjct: 4852303 gactccagaatcgttgtcaaatcctccgcagtggggctggagttgccagccagataggcc 4852244 Query: 510 agcagataggcagcaatgaacttcatc 536 | ||||||||||| ||||||||||||| Sbjct: 4852243 atcagataggcagaaatgaacttcatc 4852217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 ctctcttccttctccacgacc 248 ||||||||||||||||||||| Sbjct: 36388946 ctctcttccttctccacgacc 36388926
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 165 bits (83), Expect = 2e-37 Identities = 187/221 (84%), Gaps = 3/221 (1%) Strand = Plus / Minus Query: 231 tcttccttctccacgaccttctcttctttctttgactcagctgcaggggcagca---gca 287 ||||||||||| ||||||| ||||||||||| | |||||||||||| ||| || ||| Sbjct: 97523 tcttccttctcttcgaccttatcttctttcttcgcctcagctgcaggagcaccaccagca 97464 Query: 288 cctccagcagagggagcagcagctgaaacagccacgccaccaccaccagatggaaccgca 347 || || |||| ||||||||||| | |||||| || |||||||||||||||||||| | | Sbjct: 97463 ccaccggcagcaggagcagcagcagcaacagctacaccaccaccaccagatggaactgaa 97404 Query: 348 gcaaacttctccctgccagcagccaagagctcggtgatgtccttgcccttcacttggcac 407 |||||||||||||||||| ||| | |||||| |||||||||||||| ||||||| || Sbjct: 97403 gcaaacttctccctgccacaagcgatgagctcagtgatgtccttgccactcacttgagac 97344 Query: 408 agcatgagttccatcttctcattgtcaatttcacaaccaac 448 | || |||||||||||| ||||||| |||||||||||||| Sbjct: 97343 aacaggagttccatctttgcattgtcgatttcacaaccaac 97303 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 450 gactcaagaatggatgtcaggtcctctgcagaggggctggcgttgccagagaggtaagca 509 ||||| ||||| | ||||| ||||| |||| |||||||| |||||||| || || || Sbjct: 96952 gactccagaatcgttgtcaaatcctccgcagtggggctggagttgccagccagataggcc 96893 Query: 510 agcagataggcagcaatgaacttcatc 536 | ||||||||||| ||||||||||||| Sbjct: 96892 atcagataggcagaaatgaacttcatc 96866
>ref|XM_466076.1| Oryza sativa (japonica cultivar-group), mRNA Length = 673 Score = 101 bits (51), Expect = 2e-18 Identities = 138/167 (82%) Strand = Plus / Minus Query: 194 ctagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctc 253 |||||| |||| |||||||||||||||||| || ||||| |||||| | |||||||| Sbjct: 452 ctagtcaaacaaactgaagcccatgtcatcatcagattcttctttctcctccaccttctc 393 Query: 254 ttctttctttgactcagctgcaggggcagcagcacctccagcagagggagcagcagctga 313 ||||||||| | ||||| | ||| ||||| |||| ||||||| |||||||| |||| Sbjct: 392 ttctttcttagcctcagattgaggagcagctccaccaccagcagccggagcagctgctgc 333 Query: 314 aacagccacgccaccaccaccagatggaaccgcagcaaacttctccc 360 |||||| |||||||| || ||| ||||||| | |||||||||||||| Sbjct: 332 aacagctacgccacctccgccacatggaacagaagcaaacttctccc 286 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 507 gcaagcagataggcagcaatgaacttcatcttgga 541 ||||| |||||||||| |||||||||||| ||||| Sbjct: 139 gcaaggagataggcagaaatgaacttcattttgga 105
>dbj|AK120980.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042A15, full insert sequence Length = 672 Score = 101 bits (51), Expect = 2e-18 Identities = 138/167 (82%) Strand = Plus / Minus Query: 194 ctagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctc 253 |||||| |||| |||||||||||||||||| || ||||| |||||| | |||||||| Sbjct: 451 ctagtcaaacaaactgaagcccatgtcatcatcagattcttctttctcctccaccttctc 392 Query: 254 ttctttctttgactcagctgcaggggcagcagcacctccagcagagggagcagcagctga 313 ||||||||| | ||||| | ||| ||||| |||| ||||||| |||||||| |||| Sbjct: 391 ttctttcttagcctcagattgaggagcagctccaccaccagcagccggagcagctgctgc 332 Query: 314 aacagccacgccaccaccaccagatggaaccgcagcaaacttctccc 360 |||||| |||||||| || ||| ||||||| | |||||||||||||| Sbjct: 331 aacagctacgccacctccgccacatggaacagaagcaaacttctccc 285 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 507 gcaagcagataggcagcaatgaacttcatcttgga 541 ||||| |||||||||| |||||||||||| ||||| Sbjct: 138 gcaaggagataggcagaaatgaacttcattttgga 104
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 6e-13 Identities = 108/130 (83%) Strand = Plus / Plus Query: 231 tcttccttctccacgaccttctcttctttctttgactcagctgcaggggcagcagcacct 290 ||||| |||||| | ||||||||||||||||| | ||||| | ||| ||||| |||| Sbjct: 19475184 tcttctttctcctccaccttctcttctttcttagcctcagattgaggagcagctccacca 19475243 Query: 291 ccagcagagggagcagcagctgaaacagccacgccaccaccaccagatggaaccgcagca 350 ||||||| |||||||| |||| |||||| |||||||| || ||| ||||||| | |||| Sbjct: 19475244 ccagcagccggagcagctgctgcaacagctacgccacctccgccacatggaacagaagca 19475303 Query: 351 aacttctccc 360 |||||||||| Sbjct: 19475304 aacttctccc 19475313 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 507 gcaagcagataggcagcaatgaacttcat 535 ||||| |||||||||| |||||||||||| Sbjct: 19476421 gcaaggagataggcagaaatgaacttcat 19476449
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 83.8 bits (42), Expect = 6e-13 Identities = 108/130 (83%) Strand = Plus / Plus Query: 231 tcttccttctccacgaccttctcttctttctttgactcagctgcaggggcagcagcacct 290 ||||| |||||| | ||||||||||||||||| | ||||| | ||| ||||| |||| Sbjct: 92711 tcttctttctcctccaccttctcttctttcttagcctcagattgaggagcagctccacca 92770 Query: 291 ccagcagagggagcagcagctgaaacagccacgccaccaccaccagatggaaccgcagca 350 ||||||| |||||||| |||| |||||| |||||||| || ||| ||||||| | |||| Sbjct: 92771 ccagcagccggagcagctgctgcaacagctacgccacctccgccacatggaacagaagca 92830 Query: 351 aacttctccc 360 |||||||||| Sbjct: 92831 aacttctccc 92840 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 507 gcaagcagataggcagcaatgaacttcat 535 ||||| |||||||||| |||||||||||| Sbjct: 93948 gcaaggagataggcagaaatgaacttcat 93976
>gb|AY081851.1| Prunus dulcis 60s acidic ribosomal protein (AL60SRP) mRNA, complete cds Length = 604 Score = 79.8 bits (40), Expect = 9e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 193 tctagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttct 252 ||||||| || |||||||||||||| ||||| ||| | || || |||||| | ||||||| Sbjct: 383 tctagtcaaagagactgaagcccatatcatcatcggtatcctctttctcctcaaccttct 324 Query: 253 cttctttctttgactcagctgcag 276 |||||||||||| ||||||||||| Sbjct: 323 cttctttctttggctcagctgcag 300 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 325 caccaccaccagatggaaccgcagcaaacttctccctgccagcagccaagagctcggtga 384 |||||||||||||||| || | || ||||||||||| |||| ||| | ||||| || | Sbjct: 251 caccaccaccagatggtacagaggccaacttctcccttccagaagcaataagctctgtaa 192 Query: 385 tgtccttgcccttcactt 402 ||||||| |||||||||| Sbjct: 191 tgtccttacccttcactt 174
>gb|DQ191633.1| Solanum tuberosum 60s acidic ribosomal protein-like protein mRNA, complete cds Length = 579 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 324 ccaccaccaccagatggaaccgcagcaaacttctccctgccagcagccaagagctcggtg 383 ||||||||||||| || || | ||| |||||||||||||||||||| | ||||| ||| Sbjct: 256 ccaccaccaccagcaggtactgaagccaacttctccctgccagcagcaatcagctcagtg 197 Query: 384 atgtccttgcccttcacttgg 404 |||||||||||||| |||||| Sbjct: 196 atgtccttgcccttgacttgg 176 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 193 tctagtcgaacagactgaagcccatgtc 220 |||| ||||| ||||||||||||||||| Sbjct: 393 tctaatcgaagagactgaagcccatgtc 366
>gb|AY846829.1| Triticum aestivum ribosomal protein P1 mRNA, complete cds Length = 362 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttcctt 238 |||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 349 tagtcgaacaagctgaagcccatgtcatcatcgctctcttcctt 306
>gb|AF475108.1| Triticum aestivum acidic ribosomal protein mRNA, partial cds Length = 417 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctct 254 ||||||||||||||||| |||||||| || || ||||||||||| | |||||||| Sbjct: 416 tagtcgaacagactgaaacccatgtcttcatcagattcttccttctcttcaaccttctcc 357 Query: 255 tctttctttgactcagctgcagg 277 || |||||||||||||| ||||| Sbjct: 356 tccttctttgactcagcagcagg 334
>gb|AY106007.1| Zea mays PCO073423 mRNA sequence Length = 775 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 193 tctagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||||||||||| ||| |||||||| ||||||||||||||||||||| Sbjct: 444 tctagtcgaacagggagaatcccatgtcgtcgtcgctctcttccttctcc 395
>gb|U62751.1|ZMU62751 Zea mays acidic ribosomal protein P3a (rpp3a) mRNA, complete cds Length = 812 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 193 tctagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||||||||||| ||| |||||||| ||||||||||||||||||||| Sbjct: 511 tctagtcgaacagggagaatcccatgtcgtcgtcgctctcttccttctcc 462
>ref|XM_479786.1| Oryza sativa (japonica cultivar-group), mRNA Length = 631 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttc 239 |||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 415 tagtcgaacaagctgaaacccatgtcatcgtcgctctcctccttc 371
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttc 239 |||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 899048 tagtcgaacaagctgaaacccatgtcatcgtcgctctcctccttc 899004 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 ctctcttccttctccacgacc 248 ||||||||||||||||||||| Sbjct: 8338023 ctctcttccttctccacgacc 8338043
>dbj|D29689.1|RICYK1 Oryza sativa mRNA, sequence homologous to acidic ribosomal protein P2 gene Length = 341 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttc 239 |||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 124 tagtcgaacaagctgaaacccatgtcatcgtcgctctcctccttc 80
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttc 239 |||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 61786 tagtcgaacaagctgaaacccatgtcatcgtcgctctcctccttc 61742
>dbj|AK060433.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-B07, full insert sequence Length = 278 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttc 239 |||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 88 tagtcgaacaagctgaaacccatgtcatcgtcgctctcctccttc 44
>dbj|AK058240.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G09, full insert sequence Length = 631 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttc 239 |||||||||| ||||| |||||||||||||||||||| |||||| Sbjct: 415 tagtcgaacaagctgaaacccatgtcatcgtcgctctcctccttc 371
>ref|XM_505050.1| Yarrowia lipolytica CLIB122, YALI0F05808g predicted mRNA Length = 327 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||||||||||| |||||||||||| |||||| ||| ||||||||| Sbjct: 326 tagtcgaacagaccgaagcccatgtcgtcgtcggactcctccttctcc 279
>gb|AY290723.1| Triticum aestivum acidic ribosomal protein P1a-like mRNA, partial sequence Length = 597 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 207 ctgaagcccatgtcatcgtcgctctcttcctt 238 ||||||||||||||||| |||||||||||||| Sbjct: 369 ctgaagcccatgtcatcatcgctctcttcctt 338
>emb|X77253.1|CHHIII C.herbarum Cla h III mRNA Length = 630 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||||||||||| |||||||||||| |||||| ||| ||||||||| Sbjct: 354 tagtcgaacagaccgaagcccatgtcgtcgtcggactcctccttctcc 307
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||||||||||| |||||||||||| |||||| ||| ||||||||| Sbjct: 864710 tagtcgaacagaccgaagcccatgtcgtcgtcggactcctccttctcc 864663
>ref|NM_128331.3| Arabidopsis thaliana structural constituent of ribosome AT2G27720 mRNA, complete cds Length = 672 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||||| |||||| ||||||||||| ||| ||||| ||||| | |||||||||| Sbjct: 460 tcgaacaaactgaaacccatgtcatcatcggattcttctttctcttctttcttctcttct 401 Query: 258 ttctttgactcagctgcaggggcagcagcacctcc 292 ||||| |||||||| ||||| ||| || ||||||| Sbjct: 400 ttcttggactcagcagcaggagcaccaccacctcc 366
>ref|XM_745339.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g06830) partial mRNA Length = 336 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctc 241 ||||||||||||| |||||||||||| |||||| ||| |||||||| Sbjct: 335 tagtcgaacagaccgaagcccatgtcctcgtcggactcctccttctc 289
>ref|XM_501173.1| Yarrowia lipolytica CLIB122, YALI0B21252g predicted mRNA Length = 324 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctc 253 |||||||| |||| ||||||||||||||| ||| ||| ||||||||| | |||||||| Sbjct: 323 tagtcgaagagaccgaagcccatgtcatcatcggactcctccttctcctcaaccttctc 265
>gb|AY093717.1| Arabidopsis thaliana At2g27720/F15K20.18 mRNA, complete cds Length = 348 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||||| |||||| ||||||||||| ||| ||||| ||||| | |||||||||| Sbjct: 344 tcgaacaaactgaaacccatgtcatcatcggattcttctttctcttctttcttctcttct 285 Query: 258 ttctttgactcagctgcaggggcagcagcacctcc 292 ||||| |||||||| ||||| ||| || ||||||| Sbjct: 284 ttcttggactcagcagcaggagcaccaccacctcc 250
>gb|AF268869.1| Aspergillus fumigatus acidic ribosomal protein P1 gene, complete cds Length = 1637 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctc 241 ||||||||||||| |||||||||||| |||||| ||| |||||||| Sbjct: 1041 tagtcgaacagaccgaagcccatgtcctcgtcggactcctccttctc 995
>gb|AF410295.1|AF410295 Arabidopsis thaliana At2g27720/F15K20.18 mRNA, complete cds Length = 542 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||||| |||||| ||||||||||| ||| ||||| ||||| | |||||||||| Sbjct: 417 tcgaacaaactgaaacccatgtcatcatcggattcttctttctcttctttcttctcttct 358 Query: 258 ttctttgactcagctgcaggggcagcagcacctcc 292 ||||| |||||||| ||||| ||| || ||||||| Sbjct: 357 ttcttggactcagcagcaggagcaccaccacctcc 323
>emb|BX821300.1|CNS0A8EB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL32ZF07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 585 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||||| |||||| ||||||||||| ||| ||||| ||||| | |||||||||| Sbjct: 406 tcgaacaaactgaaacccatgtcatcatcggattcttctttctcttctttcttctcttct 347 Query: 258 ttctttgactcagctgcaggggcagcagcacctcc 292 ||||| |||||||| ||||| ||| || ||||||| Sbjct: 346 ttcttggactcagcagcaggagcaccaccacctcc 312
>emb|BX822066.1|CNS0A897 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL9ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 614 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||||| |||||| ||||||||||| ||| ||||| ||||| | |||||||||| Sbjct: 402 tcgaacaaactgaaacccatgtcatcatcggattcttctttctcttctttcttctcttct 343 Query: 258 ttctttgactcagctgcaggggcagcagcacctcc 292 ||||| |||||||| ||||| ||| || ||||||| Sbjct: 342 ttcttggactcagcagcaggagcaccaccacctcc 308
>gb|AY087501.1| Arabidopsis thaliana clone 36076 mRNA, complete sequence Length = 561 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||| |||||||| ||||||||||| ||| |||||||| || | |||||||||| Sbjct: 417 tcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttctcttct 358 Query: 258 ttctttgactcagctgcaggggcagcagcacctcc 292 ||||| |||||||| ||||| ||| || ||||||| Sbjct: 357 ttcttggactcagcagcaggagcaccaccacctcc 323
>gb|AY085945.1| Arabidopsis thaliana clone 19986 mRNA, complete sequence Length = 621 Score = 54.0 bits (27), Expect = 5e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||||| |||||| ||||||||||| ||| ||||| ||||| | |||||||||| Sbjct: 460 tcgaacaaactgaaacccatgtcatcatcggattcttctttctcttctttcttctcttct 401 Query: 258 ttctttgactcagctgcaggggcagcagcacctcc 292 ||||| |||||||| ||||| ||| || ||||||| Sbjct: 400 ttcttggactcagcagcaggagcaccaccacctcc 366
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctc 253 |||||||| |||| ||||||||||||||| ||| ||| ||||||||| | |||||||| Sbjct: 2788390 tagtcgaagagaccgaagcccatgtcatcatcggactcctccttctcctcaaccttctc 2788332
>gb|BT016372.1| Zea mays clone Contig205 mRNA sequence Length = 576 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 193 tctagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||||||||||| ||| ||||||| ||||||||||||||||||||| Sbjct: 386 tctagtcgaacagggagaatcccatgtggtcgtcgctctcttccttctcc 337
>gb|AF434667.1| Rhodotorula glutinis acyl carrier protein mRNA, complete cds Length = 565 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctc 232 |||||||| |||| |||||||||||| ||||||||||| Sbjct: 396 tagtcgaagagaccgaagcccatgtcgtcgtcgctctc 359
>dbj|AK121459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143J09, full insert sequence Length = 782 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 207 ctgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttctttctttg 264 ||||| ||||||||||| || |||||||||||| |||||||||| |||||||||| Sbjct: 410 ctgaaacccatgtcatcatcagactcttccttctcttcgaccttctcctctttctttg 353 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 324 ccaccaccaccagatggaaccgcagcaaacttctccctgccagcagc 370 ||||||||||| || || || | ||||||||||||||| |||||||| Sbjct: 293 ccaccaccacctgagggcacagaagcaaacttctcccttccagcagc 247
>dbj|AK058730.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-F09, full insert sequence Length = 460 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 207 ctgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttctttctttg 264 ||||| ||||||||||| || |||||||||||| |||||||||| |||||||||| Sbjct: 217 ctgaaacccatgtcatcatcagactcttccttctcttcgaccttctcctctttctttg 160 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 324 ccaccaccaccagatggaaccgcagcaaacttctccctgccagcagc 370 ||||||||||| || || || | ||||||||||||||| |||||||| Sbjct: 100 ccaccaccacctgagggcacagaagcaaacttctcccttccagcagc 54
>ref|XM_806544.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506879.60) partial mRNA Length = 579 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 298 agggagcagcagctgaaacagccac 322 ||||||||||||||||||||||||| Sbjct: 191 agggagcagcagctgaaacagccac 215
>dbj|AB226278.1| Aspergillus oryzae cDNA, contig sequence: AoEST3139 Length = 1168 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 |||||||| |||| ||||||||||||||||||| Sbjct: 1034 tagtcgaaaagaccgaagcccatgtcatcgtcg 1002
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 |||||||| |||| ||||||||||||||||||| Sbjct: 2149077 tagtcgaaaagaccgaagcccatgtcatcgtcg 2149045 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 214 ccatgtcatcgtcgctctcttcct 237 |||| ||||||||||||||||||| Sbjct: 814437 ccatttcatcgtcgctctcttcct 814414
>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete sequence Length = 118196 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 248 cttctcttctttctttgactcagctgcaggggcagcagcacctcc 292 ||||||||||||||| |||||||| ||||| ||| || ||||||| Sbjct: 60450 cttctcttctttcttggactcagcagcaggagcaccaccacctcc 60494 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 248 cttctcttctttctttgactcagctgcag 276 ||||||||||||||| |||||||| |||| Sbjct: 62166 cttctcttctttcttggactcagcagcag 62194
>gb|AF034539.1| Leishmania donovani acidic ribosomal protein-1 gene, complete cds Length = 392 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 |||||||| |||| ||||||||||||||||||| Sbjct: 360 tagtcgaagagaccgaagcccatgtcatcgtcg 328
>gb|AF045020.1|AF045020 Leishmania braziliensis acidic ribosomal P2 beta protein mRNA, complete cds Length = 456 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 ||||||||||||| |||||||||||||||||| Sbjct: 322 tagtcgaacagaccaaagcccatgtcatcgtcg 290
>emb|X68016.1|LILIPB L.infantum LiP' gene for acidic ribosomal protein LiP' Length = 2936 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 ||||||||||||| |||||||||||| |||||| Sbjct: 2035 tagtcgaacagaccgaagcccatgtcgtcgtcg 2003 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 ||||||||||||| |||||||||||| |||||| Sbjct: 653 tagtcgaacagaccgaagcccatgtcgtcgtcg 621
>ref|NM_202655.1| Arabidopsis thaliana structural constituent of ribosome AT3G44590 transcript variant AT3G44590.2 mRNA, complete cds Length = 548 Score = 48.1 bits (24), Expect = 0.032 Identities = 53/62 (85%), Gaps = 3/62 (4%) Strand = Plus / Minus Query: 305 agcagctgaaacagccacgccaccaccaccagatggaaccgcagcaaacttctccctgcc 364 |||||||||||||||||| ||||||||||||||| || | || ||||||||||| || Sbjct: 270 agcagctgaaacagccac---accaccaccagatggcacagacgctaacttctccctacc 214 Query: 365 ag 366 || Sbjct: 213 ag 212
>ref|NM_114327.3| Arabidopsis thaliana structural constituent of ribosome AT3G44590 transcript variant AT3G44590.1 mRNA, complete cds Length = 622 Score = 48.1 bits (24), Expect = 0.032 Identities = 53/62 (85%), Gaps = 3/62 (4%) Strand = Plus / Minus Query: 305 agcagctgaaacagccacgccaccaccaccagatggaaccgcagcaaacttctccctgcc 364 |||||||||||||||||| ||||||||||||||| || | || ||||||||||| || Sbjct: 297 agcagctgaaacagccac---accaccaccagatggcacagacgctaacttctccctacc 241 Query: 365 ag 366 || Sbjct: 240 ag 239
>ref|XM_369279.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG06185.4) partial mRNA Length = 330 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 |||||||| |||| |||||||||||| |||||| ||| ||||||||| Sbjct: 329 tagtcgaagagaccgaagcccatgtcctcgtcggactcctccttctcc 282
>gb|AC150551.1| Drosophila melanogaster clone BACR16A12, complete sequence Length = 185417 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtc 226 ||||||||||||| |||||||||||| ||||| Sbjct: 81124 tagtcgaacagaccgaagcccatgtcgtcgtc 81093
>gb|AY702008.1| Leishmania donovani strain MHOM/IN/1983/AG83 acidic ribosomal protein mRNA, complete cds Length = 455 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 196 agtcgaacagactgaagcccatgtcatcgtcg 227 ||||||| |||| ||||||||||||||||||| Sbjct: 331 agtcgaagagaccgaagcccatgtcatcgtcg 300
>ref|XM_755686.1| Ustilago maydis 521 hypothetical protein (UM04632.1) partial mRNA Length = 336 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 |||||||| |||| |||||||||||| || ||| ||||||||||||| Sbjct: 335 tagtcgaagagaccgaagcccatgtcgtcatcggactcttccttctcc 288
>ref|XM_750250.1| Aspergillus fumigatus Af293 60S acidic ribosomal protein P2 (Afu2g10100) partial mRNA Length = 336 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 |||||||| |||| |||||||||||| |||||| ||| ||||||||| Sbjct: 335 tagtcgaaaagaccgaagcccatgtcctcgtcggactcctccttctcc 288
>emb|AL353818.1|ATF14L2 Arabidopsis thaliana DNA chromosome 3, BAC clone F14L2 Length = 107027 Score = 48.1 bits (24), Expect = 0.032 Identities = 53/62 (85%), Gaps = 3/62 (4%) Strand = Plus / Minus Query: 305 agcagctgaaacagccacgccaccaccaccagatggaaccgcagcaaacttctccctgcc 364 |||||||||||||||||| ||||||||||||||| || | || ||||||||||| || Sbjct: 95775 agcagctgaaacagccac---accaccaccagatggcacagacgctaacttctccctacc 95719 Query: 365 ag 366 || Sbjct: 95718 ag 95717
>gb|AC115482.2| Drosophila melanogaster, chromosome 2L, region 21D-21D, BAC clone BACR04A24, complete sequence Length = 166677 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtc 226 ||||||||||||| |||||||||||| ||||| Sbjct: 86554 tagtcgaacagaccgaagcccatgtcgtcgtc 86523
>ref|NM_057282.3| Drosophila melanogaster Ribosomal protein LP1 CG4087-RA (RpLP1), mRNA Length = 631 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtc 226 ||||||||||||| |||||||||||| ||||| Sbjct: 482 tagtcgaacagaccgaagcccatgtcgtcgtc 451
>gb|AF268870.1| Aspergillus fumigatus acidic ribosomal protein P2 gene, complete cds Length = 1731 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 |||||||| |||| |||||||||||| |||||| ||| ||||||||| Sbjct: 1260 tagtcgaaaagaccgaagcccatgtcctcgtcggactcctccttctcc 1213
>gb|AY069125.1| Drosophila melanogaster GH13422 full length cDNA Length = 647 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtc 226 ||||||||||||| |||||||||||| ||||| Sbjct: 482 tagtcgaacagaccgaagcccatgtcgtcgtc 451
>gb|S62170.1| rp21C=acidic ribosomal protein rpA2 [Drosophila melanogaster, Kc 7E10(0) cells, mRNA, 504 nt] Length = 504 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtc 226 ||||||||||||| |||||||||||| ||||| Sbjct: 345 tagtcgaacagaccgaagcccatgtcgtcgtc 314
>emb|BX825897.1|CNS0A56W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL70ZF05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 565 Score = 48.1 bits (24), Expect = 0.032 Identities = 53/62 (85%), Gaps = 3/62 (4%) Strand = Plus / Minus Query: 305 agcagctgaaacagccacgccaccaccaccagatggaaccgcagcaaacttctccctgcc 364 |||||||||||||||||| ||||||||||||||| || | || ||||||||||| || Sbjct: 272 agcagctgaaacagccac---accaccaccagatggcacagacgctaacttctccctacc 216 Query: 365 ag 366 || Sbjct: 215 ag 214
>emb|BX825458.1|CNS0A4ZS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZD01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 503 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 305 agcagctgaaacagccacgccaccacca 332 |||||||||||||||||| ||||||||| Sbjct: 270 agcagctgaaacagccacaccaccacca 243
>gb|BT004748.1| Arabidopsis thaliana At3g44590 gene, complete cds Length = 336 Score = 48.1 bits (24), Expect = 0.032 Identities = 53/62 (85%), Gaps = 3/62 (4%) Strand = Plus / Minus Query: 305 agcagctgaaacagccacgccaccaccaccagatggaaccgcagcaaacttctccctgcc 364 |||||||||||||||||| ||||||||||||||| || | || ||||||||||| || Sbjct: 228 agcagctgaaacagccac---accaccaccagatggcacagacgctaacttctccctacc 172 Query: 365 ag 366 || Sbjct: 171 ag 170
>dbj|AK109195.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-B08, full insert sequence Length = 1051 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtc 226 |||||||| |||| |||||||||||||||||| Sbjct: 988 tagtcgaagagaccgaagcccatgtcatcgtc 957
>emb|X85180.1|CHRPP1 C.herbarum mRNA for ribosomal protein P1 Length = 595 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 |||||||| |||| |||||||||||| |||||| ||| ||||||||| Sbjct: 396 tagtcgaagagaccgaagcccatgtcgtcgtcggactcctccttctcc 349
>emb|AJ224333.1|AFAJ4333 Aspergillus fumigatus mRNA for rAsp f 8 allergen Length = 336 Score = 48.1 bits (24), Expect = 0.032 Identities = 42/48 (87%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 |||||||| |||| |||||||||||| |||||| ||| ||||||||| Sbjct: 335 tagtcgaagagaccgaagcccatgtcctcgtcggactcctccttctcc 288
>gb|AE003589.4| Drosophila melanogaster chromosome 2L, section 2 of 83 of the complete sequence Length = 306076 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtc 226 ||||||||||||| |||||||||||| ||||| Sbjct: 114717 tagtcgaacagaccgaagcccatgtcgtcgtc 114686
>gb|AC005762.1|AC005762 Drosophila melanogaster DNA sequence (P1s DS00679 (D272) and DS05054 (D135)), complete sequence Length = 81053 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtc 226 ||||||||||||| |||||||||||| ||||| Sbjct: 59943 tagtcgaacagaccgaagcccatgtcgtcgtc 59912
>gb|L46848.1|SOYARPP Glycine max acidic ribosomal protein P0 mRNA, complete cds Length = 1247 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtc 226 ||||| ||||||||||| |||||||||||||| Sbjct: 1089 tagtcaaacagactgaaacccatgtcatcgtc 1058
>emb|Y00504.1|DMRP21C Drosophila melanogaster mRNA for A-type ribosomal protein rp21C Length = 526 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtc 226 ||||||||||||| |||||||||||| ||||| Sbjct: 386 tagtcgaacagaccgaagcccatgtcgtcgtc 355
>ref|NM_124144.3| Arabidopsis thaliana structural constituent of ribosome AT5G47700 mRNA, complete cds Length = 675 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Minus Query: 273 gcaggggcagcagcacctccagcagagggagcagcagctgaaacagccacgccaccacca 332 |||| ||||||| |||| ||||||| ||||||||||||| ||||| | | ||||| ||| Sbjct: 377 gcagcggcagcaccaccgccagcagcaggagcagcagctgcaacaggcgcaccacctcca 318 Query: 333 cca 335 ||| Sbjct: 317 cca 315
>ref|NM_201820.1| Arabidopsis thaliana structural constituent of ribosome AT2G27710 transcript variant AT2G27710.3 mRNA, complete cds Length = 683 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||| |||||||| ||||||||||| ||| |||||||| || | |||||||||| Sbjct: 482 tcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttctcttct 423 Query: 258 ttctttgactcagctgcag 276 ||||| |||||||| |||| Sbjct: 422 ttcttggactcagcagcag 404
>ref|NM_179775.1| Arabidopsis thaliana structural constituent of ribosome AT2G27710 transcript variant AT2G27710.2 mRNA, complete cds Length = 613 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||| |||||||| ||||||||||| ||| |||||||| || | |||||||||| Sbjct: 412 tcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttctcttct 353 Query: 258 ttctttgactcagctgcag 276 ||||| |||||||| |||| Sbjct: 352 ttcttggactcagcagcag 334
>ref|NM_128330.2| Arabidopsis thaliana structural constituent of ribosome AT2G27710 transcript variant AT2G27710.1 mRNA, complete cds Length = 617 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||| |||||||| ||||||||||| ||| |||||||| || | |||||||||| Sbjct: 416 tcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttctcttct 357 Query: 258 ttctttgactcagctgcag 276 ||||| |||||||| |||| Sbjct: 356 ttcttggactcagcagcag 338
>gb|DQ207857.1| Solanum tuberosum clone 078C02 unknown mRNA Length = 580 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 193 tctagtcgaacagactgaagcccatgtcatc 223 |||| ||||| |||||||||||||||||||| Sbjct: 394 tctaatcgaaaagactgaagcccatgtcatc 364
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttcct 237 ||||||||||||| ||||||||||| ||||||| ||| |||| Sbjct: 144215 tagtcgaacagaccaaagcccatgtcgtcgtcgccctcctcct 144173 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttcct 237 ||||||||||||| ||||||||||| ||||||| ||| |||| Sbjct: 143264 tagtcgaacagaccaaagcccatgtcgtcgtcgccctcctcct 143222
>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12, complete sequence Length = 155402 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 230 ctcttccttctccacgaccttctcttctttctttg 264 |||||||||||| |||||||||| |||||||||| Sbjct: 82932 ctcttccttctcttcgaccttctcctctttctttg 82898 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 324 ccaccaccaccagatggaaccgcagcaaacttctccctgccagcagc 370 ||||||||||| || || || | ||||||||||||||| |||||||| Sbjct: 82838 ccaccaccacctgagggcacagaagcaaacttctcccttccagcagc 82792
>ref|XM_360515.1| Magnaporthe grisea 70-15 hypothetical protein (MG10827.4) partial mRNA Length = 330 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctc 241 |||||||| |||| |||||||||||| |||||| ||| |||||||| Sbjct: 329 tagtcgaagagaccgaagcccatgtcctcgtcggactcctccttctc 283
>ref|XM_658231.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5719.2), mRNA Length = 330 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctc 241 |||||||| |||| |||||||||||| |||||| ||| |||||||| Sbjct: 329 tagtcgaagagaccgaagcccatgtcctcgtcggactcctccttctc 283
>gb|AY096430.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P1 (At5g47700) mRNA, complete cds Length = 373 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Minus Query: 273 gcaggggcagcagcacctccagcagagggagcagcagctgaaacagccacgccaccacca 332 |||| ||||||| |||| ||||||| ||||||||||||| ||||| | | ||||| ||| Sbjct: 260 gcagcggcagcaccaccgccagcagcaggagcagcagctgcaacaggcgcaccacctcca 201 Query: 333 cca 335 ||| Sbjct: 200 cca 198
>gb|AY070049.1| Arabidopsis thaliana putative 60S acidic ribosomal protein P1 (At5g47700) mRNA, complete cds Length = 596 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Minus Query: 273 gcaggggcagcagcacctccagcagagggagcagcagctgaaacagccacgccaccacca 332 |||| ||||||| |||| ||||||| ||||||||||||| ||||| | | ||||| ||| Sbjct: 333 gcagcggcagcaccaccgccagcagcaggagcagcagctgcaacaggcgcaccacctcca 274 Query: 333 cca 335 ||| Sbjct: 273 cca 271
>dbj|AB226279.1| Aspergillus oryzae cDNA, contig sequence: AoEST3140 Length = 834 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctc 241 |||||||| |||| |||||||||||| |||||| ||| |||||||| Sbjct: 427 tagtcgaaaagaccgaagcccatgtcctcgtcggactcctccttctc 381
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctc 241 |||||||| |||| |||||||||||| |||||| ||| |||||||| Sbjct: 1228310 tagtcgaaaagaccgaagcccatgtcctcgtcggactcctccttctc 1228264
>gb|AY062854.1| Arabidopsis thaliana 60S acidic ribosomal protein P2 (At2g27710; F15K20.19) mRNA, complete cds Length = 565 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||| |||||||| ||||||||||| ||| |||||||| || | |||||||||| Sbjct: 415 tcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttctcttct 356 Query: 258 ttctttgactcagctgcag 276 ||||| |||||||| |||| Sbjct: 355 ttcttggactcagcagcag 337
>gb|AF428429.1|AF428429 Arabidopsis thaliana At2g27710/F15K20.19 mRNA, complete cds Length = 583 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||| |||||||| ||||||||||| ||| |||||||| || | |||||||||| Sbjct: 412 tcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttctcttct 353 Query: 258 ttctttgactcagctgcag 276 ||||| |||||||| |||| Sbjct: 352 ttcttggactcagcagcag 334
>ref|XM_571764.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 1065 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctc 241 |||||||| |||| |||||||||||| ||||| |||||||||||| Sbjct: 980 tagtcgaagagaccgaagcccatgtcgtcgtcagactcttccttctc 934
>gb|BT006518.1| Arabidopsis thaliana At2g27710 gene, complete cds Length = 348 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||| |||||||| ||||||||||| ||| |||||||| || | |||||||||| Sbjct: 344 tcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttctcttct 285 Query: 258 ttctttgactcagctgcag 276 ||||| |||||||| |||| Sbjct: 284 ttcttggactcagcagcag 266
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 230 ctcttccttctccacgaccttctcttctttctttg 264 |||||||||||| |||||||||| |||||||||| Sbjct: 21691756 ctcttccttctcttcgaccttctcctctttctttg 21691722 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 324 ccaccaccaccagatggaaccgcagcaaacttctccctgccagcagc 370 ||||||||||| || || || | ||||||||||||||| |||||||| Sbjct: 21691662 ccaccaccacctgagggcacagaagcaaacttctcccttccagcagc 21691616
>emb|BX820171.1|CNS0AA6T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZH02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 548 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||| |||||||| ||||||||||| ||| |||||||| || | |||||||||| Sbjct: 396 tcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttctcttct 337 Query: 258 ttctttgactcagctgcag 276 ||||| |||||||| |||| Sbjct: 336 ttcttggactcagcagcag 318
>emb|BX821707.1|CNS0A88S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL66ZE10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 629 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||| |||||||| ||||||||||| ||| |||||||| || | |||||||||| Sbjct: 482 tcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttctcttct 423 Query: 258 ttctttgactcagctgcag 276 ||||| |||||||| |||| Sbjct: 422 ttcttggactcagcagcag 404
>emb|BX829474.1|CNS0A1FF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZH05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 488 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Minus Query: 273 gcaggggcagcagcacctccagcagagggagcagcagctgaaacagccacgccaccacca 332 |||| ||||||| |||| ||||||| ||||||||||||| ||||| | | ||||| ||| Sbjct: 265 gcagcggcagcaccaccgccagcagcaggagcagcagctgcaacaggcgcaccacctcca 206 Query: 333 cca 335 ||| Sbjct: 205 cca 203
>emb|BX832269.1|CNS0A0Z2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZC03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 553 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Minus Query: 277 gggcagcagcacctccagcagagggagcagcagctgaaacagccacgccaccaccacca 335 |||||||| |||| ||||||| ||||||||||||| ||||| | | ||||| |||||| Sbjct: 305 gggcagcaccaccgccagcagcaggagcagcagctgcaacaggcgcaccacctccacca 247
>emb|BX831816.1|CNS0A16C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH31ZA06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 547 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Minus Query: 273 gcaggggcagcagcacctccagcagagggagcagcagctgaaacagccacgccaccacca 332 |||| ||||||| |||| ||||||| ||||||||||||| ||||| | | ||||| ||| Sbjct: 297 gcagcggcagcaccaccgccagcagcaggagcagcagctgcaacaggcgcaccacctcca 238 Query: 333 cca 335 ||| Sbjct: 237 cca 235
>emb|BX833376.1|CNS0A0I0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL4ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 612 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Minus Query: 273 gcaggggcagcagcacctccagcagagggagcagcagctgaaacagccacgccaccacca 332 |||| ||||||| |||| ||||||| ||||||||||||| ||||| | | ||||| ||| Sbjct: 311 gcagcggcagcaccaccgccagcagcaggagcagcagctgcaacaggcgcaccacctcca 252 Query: 333 cca 335 ||| Sbjct: 251 cca 249
>emb|BX841989.1|CNS09Y9W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 536 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctccacgaccttctcttct 257 ||||| |||||||| ||||||||||| ||| |||||||| || | |||||||||| Sbjct: 389 tcgaatagactgaaacccatgtcatcatcggattcttccttttcttccttcttctcttct 330 Query: 258 ttctttgactcagctgcag 276 ||||| |||||||| |||| Sbjct: 329 ttcttggactcagcagcag 311
>emb|BX841725.1|CNS09YL5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL50ZB10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 547 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Minus Query: 273 gcaggggcagcagcacctccagcagagggagcagcagctgaaacagccacgccaccacca 332 |||| ||||||| |||| ||||||| ||||||||||||| ||||| | | ||||| ||| Sbjct: 297 gcagcggcagcaccaccgccagcagcaggagcagcagctgcaacaggcgcaccacctcca 238 Query: 333 cca 335 ||| Sbjct: 237 cca 235
>gb|AY085303.1| Arabidopsis thaliana clone 14401 mRNA, complete sequence Length = 676 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Minus Query: 273 gcaggggcagcagcacctccagcagagggagcagcagctgaaacagccacgccaccacca 332 |||| ||||||| |||| ||||||| ||||||||||||| ||||| | | ||||| ||| Sbjct: 378 gcagcggcagcaccaccgccagcagcaggagcagcagctgcaacaggcgcaccacctcca 319 Query: 333 cca 335 ||| Sbjct: 318 cca 316
>dbj|D21114.1|RICYK132 Oryza sativa mRNA for ribosomal protein A2, partial sequence Length = 344 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 324 ccaccaccaccagatggaaccgcagcaaacttctccctgccagcagc 370 ||||||||||| || || || | ||||||||||||||| |||||||| Sbjct: 269 ccaccaccacctgagggcacagaagcaaacttctcccttccagcagc 223
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23 Length = 82503 Score = 46.1 bits (23), Expect = 0.13 Identities = 53/63 (84%) Strand = Plus / Plus Query: 273 gcaggggcagcagcacctccagcagagggagcagcagctgaaacagccacgccaccacca 332 |||| ||||||| |||| ||||||| ||||||||||||| ||||| | | ||||| ||| Sbjct: 5425 gcagcggcagcaccaccgccagcagcaggagcagcagctgcaacaggcgcaccacctcca 5484 Query: 333 cca 335 ||| Sbjct: 5485 cca 5487
>gb|AF045249.1|AF045249 Leishmania peruviana acidic ribosomal protein P1 mRNA, complete cds Length = 628 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttcct 237 ||||||||||||| |||||||||||| || |||| ||| |||| Sbjct: 348 tagtcgaacagaccgaagcccatgtcgtcatcgccctcctcct 306
>emb|AJ278460.1|JRE278460 Juglans regia mRNA for 60S ribosomal protein (rib 60S) Length = 686 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 249 ttctcttctttctttgactcagctgcaggggcagcagca 287 ||||| |||||||||| ||||||||||| ||||||||| Sbjct: 376 ttctcctctttctttggctcagctgcagcagcagcagca 338
>gb|AY561519.1| Danio rerio acidic ribosomal protein P1 (rplP1) mRNA, complete cds Length = 498 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtc 220 ||||||||||||| |||||||||||| Sbjct: 435 tagtcgaacagaccgaagcccatgtc 410
>ref|XM_751300.1| Ustilago maydis 521 hypothetical protein (UM00246.1) partial mRNA Length = 627 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtc 220 ||||||||||||| |||||||||||| Sbjct: 626 tagtcgaacagaccgaagcccatgtc 601
>gb|AY231791.1| Drosophila yakuba clone yak-em_RpP2 mRNA sequence Length = 336 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 197 gtcgaacagactgaagcccatgtcatcgtc 226 ||||||||||| |||||||||||| ||||| Sbjct: 336 gtcgaacagaccgaagcccatgtcgtcgtc 307
>ref|XM_788931.1| PREDICTED: Strongylocentrotus purpuratus similar to 60S acidic ribosomal protein P0 (L10E) (LOC589287), mRNA Length = 780 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 194 ctagtcgaacagactgaagcccatgtcatcgtcg 227 ||||||||| |||| ||| ||||||||||||||| Sbjct: 483 ctagtcgaagagaccgaaacccatgtcatcgtcg 450
>gb|AC092815.2| Homo sapiens chromosome 1 clone RP5-1029K14, complete sequence Length = 126651 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 aggggcagcagcacctccagca 296 |||||||||||||||||||||| Sbjct: 64614 aggggcagcagcacctccagca 64593
>ref|NM_200029.1| Danio rerio ribosomal protein, large, P1 (rplp1), mRNA Length = 520 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtc 220 ||||||||||||| |||||||||||| Sbjct: 459 tagtcgaacagaccgaagcccatgtc 434
>gb|AY072284.1| Spodoptera frugiperda 60S acidic ribosomal protein P0 mRNA, complete cds Length = 1062 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctc 232 ||||| || |||| |||||||||||| ||||||||||| Sbjct: 1032 tagtcaaaaagaccgaagcccatgtcgtcgtcgctctc 995
>dbj|AB180444.1| Plutella xylostella mRNA for 60S acidic ribosomal protein P2, complete cds Length = 522 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 193 tctagtcgaacagactgaagcccatgtcatcgtc 226 |||||||||| |||| |||||||||||| ||||| Sbjct: 410 tctagtcgaagagaccgaagcccatgtcctcgtc 377
>gb|AE005041.1| Halobacterium sp. NRC-1 section 72 of 170 of the complete genome Length = 13759 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 aacagccacgccaccaccacca 335 |||||||||||||||||||||| Sbjct: 12555 aacagccacgccaccaccacca 12576
>gb|AY161269.1| Leishmania donovani ribosomal protein P1-like protein mRNA, complete cds Length = 617 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Minus Query: 196 agtcgaacagactgaagcccatgtcatcgtcgctctcttcct 237 |||||||||||| || |||||||| ||||||| |||||||| Sbjct: 400 agtcgaacagaccaaaacccatgtcgtcgtcgccctcttcct 359
>gb|BC062852.1| Danio rerio ribosomal protein, large, P1, mRNA (cDNA clone MGC:77776 IMAGE:7001140), complete cds Length = 520 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtc 220 ||||||||||||| |||||||||||| Sbjct: 459 tagtcgaacagaccgaagcccatgtc 434
>dbj|AP004939.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17M09, TM0105, complete sequence Length = 127990 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 201 aacagactgaagcccatgtcatcgtcgctctcttcctt 238 ||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 37923 aacaggctgaatcccatatcatcgtcactctcttcctt 37960
>ref|NM_105867.2| Arabidopsis thaliana catalytic/ iron ion binding AT1G72090 mRNA, complete cds Length = 1976 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 ccttctcttctttctttgact 267 ||||||||||||||||||||| Sbjct: 1705 ccttctcttctttctttgact 1685
>ref|XM_473881.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5496 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 tcttctttctttgactcagctgcag 276 ||||| ||||||||||||||||||| Sbjct: 3953 tcttcgttctttgactcagctgcag 3929
>gb|AY769268.1| Bombyx mori ribosomal protein P1 (RpP1) mRNA, complete cds Length = 537 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 ||||| || |||| ||||||||||||||||||| Sbjct: 419 tagtcaaagagaccgaagcccatgtcatcgtcg 387
>gb|AY769267.1| Bombyx mori ribosomal protein P0 (RpP0) mRNA, complete cds Length = 1201 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 193 tctagtcgaacagactgaagcccatgtcatcgtcgctctcttcct 237 |||||||||| |||| ||||||||||| || ||||| ||||||| Sbjct: 1084 tctagtcgaagagaccaaagcccatgtcgtcatcgctttcttcct 1040
>gb|BT016538.1| Zea mays clone Contig371 mRNA sequence Length = 707 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 196 agtcgaacagactgaagcccatgtc 220 |||||||||| |||||||||||||| Sbjct: 419 agtcgaacaggctgaagcccatgtc 395
>gb|BT018010.1| Zea mays clone EL01N0528A08.c mRNA sequence Length = 654 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 196 agtcgaacagactgaagcccatgtc 220 |||||||||| |||||||||||||| Sbjct: 388 agtcgaacaggctgaagcccatgtc 364
>gb|U87960.1|RNU87960 Rattus norvegicus leukocyte common antigen receptor (LAR) gene, trans-spliced alternative untranslated exon Length = 2479 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 268 cagctgcaggggcagcagcacctccagcagagggagcagcagctg 312 |||||||||||||||| ||| || |||||| | ||||||||||| Sbjct: 2118 cagctgcaggggcagccgcagctgcagcagcagcagcagcagctg 2162
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 552 tgaaggcgcagcggcggcggagggc 576 |||||||||||||||||||| |||| Sbjct: 3095572 tgaaggcgcagcggcggcggcgggc 3095596
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18, complete sequence Length = 143163 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 cagcagagggagcagcagctg 312 ||||||||||||||||||||| Sbjct: 92278 cagcagagggagcagcagctg 92258
>ref|XM_362022.1| Magnaporthe grisea 70-15 hypothetical protein (MG04467.4) partial cds Length = 942 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 |||||||| |||| |||||||||||| |||||| Sbjct: 941 tagtcgaagagaccgaagcccatgtcctcgtcg 909
>gb|DQ481668.1| Takifugu rubripes HoxDa gene cluster, complete sequence Length = 366816 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 tggccaaagatagatactgca 174 ||||||||||||||||||||| Sbjct: 40668 tggccaaagatagatactgca 40688
>emb|CR293498.12| Zebrafish DNA sequence from clone DKEY-5I16 in linkage group 23, complete sequence Length = 147189 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 136963 cttctttctttgactcagctg 136983
>emb|BX927290.22| Zebrafish DNA sequence from clone CH211-212K5 in linkage group 14, complete sequence Length = 222032 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 176209 cttctttctttgactcagctg 176229
>emb|AL935274.14| Zebrafish DNA sequence from clone CH211-249C2 in linkage group 4, complete sequence Length = 121896 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 41893 cttctttctttgactcagctg 41873
>emb|CR812792.16| Zebrafish DNA sequence from clone DKEY-33J18 in linkage group 4, complete sequence Length = 123987 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 4013 cttctttctttgactcagctg 3993
>emb|CR391997.9| Zebrafish DNA sequence from clone CH211-236G14 in linkage group 17, complete sequence Length = 163437 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 71664 cttctttctttgactcagctg 71644
>gb|AF548317.1| Branchiostoma belcheri ribosomal protein P2 mRNA, complete cds Length = 526 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 ||||||||||| | |||||||||||| |||||| Sbjct: 399 tagtcgaacagtccgaagcccatgtcttcgtcg 367
>emb|BX649269.11| Zebrafish DNA sequence from clone CH211-195G14 in linkage group 13, complete sequence Length = 141533 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 93377 cttctttctttgactcagctg 93397
>emb|CR846087.30| Zebrafish DNA sequence from clone DKEY-196N19 in linkage group 8, complete sequence Length = 232595 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 60259 cttctttctttgactcagctg 60279
>emb|CR382326.12| Zebrafish DNA sequence from clone DKEYP-50A7 in linkage group 14, complete sequence Length = 133943 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 17243 cttctttctttgactcagctg 17223
>gb|AC154556.2| Mus musculus BAC clone RP23-423F3 from chromosome 14, complete sequence Length = 189092 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 230 ctcttccttctccacgaccttctcttctttctt 262 |||||||| |||| | ||||||||||||||||| Sbjct: 176496 ctcttcctcctcctccaccttctcttctttctt 176528
>gb|U97194.4| Caenorhabditis elegans cosmid C37A2, complete sequence Length = 27406 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 |||||||| |||| |||||||||||| |||||| Sbjct: 14721 tagtcgaagagaccgaagcccatgtcgtcgtcg 14753
>emb|Z74696.1|HS203C2 Human DNA sequence from clone RP1-203C2 on chromosome X Contains the gene for actin-related protein T1 (ACTRT1), a novel pseudogene, a BTG family member 3 (BTG3) pseudodgene and a actin-related protein pseudogene, complete sequence Length = 150620 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 tcagctgcaggggcagcagca 287 ||||||||||||||||||||| Sbjct: 138639 tcagctgcaggggcagcagca 138619
>emb|AL139320.18| Human DNA sequence from clone RP11-154C3 on chromosome 13 Contains a cytochrome c oxidase subunit IV pseudogene, a novel gene, an aldo-keto reductase family 1, member B10 (aldose reductase) (AKR1B10) pseudogene, a novel gene, similar to RIKEN cDNA 1700086N05 and CpG island, complete sequence Length = 112107 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 tccagcagagggagcagcagc 310 ||||||||||||||||||||| Sbjct: 41261 tccagcagagggagcagcagc 41241
>emb|BX510948.13| Zebrafish DNA sequence from clone DKEY-4E4 in linkage group 8, complete sequence Length = 124751 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 10806 cttctttctttgactcagctg 10786
>emb|CR848001.13| Zebrafish DNA sequence from clone CH211-264G8 in linkage group 20, complete sequence Length = 96579 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 82560 cttctttctttgactcagctg 82580
>emb|CR381619.9| Zebrafish DNA sequence from clone DKEY-1O2 in linkage group 5, complete sequence Length = 266753 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 206294 cttctttctttgactcagctg 206274
>gb|AC159196.2| Mus musculus BAC clone RP23-430O17 from chromosome 13, complete sequence Length = 198595 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 cagcagagggagcagcagctg 312 ||||||||||||||||||||| Sbjct: 27217 cagcagagggagcagcagctg 27237
>emb|AL662950.2|OSJN00152 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008M17, complete sequence Length = 133279 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 tcttctttctttgactcagctgcag 276 ||||| ||||||||||||||||||| Sbjct: 48834 tcttcgttctttgactcagctgcag 48810
>emb|CR847859.13| Zebrafish DNA sequence from clone DKEYP-2F4 in linkage group 14, complete sequence Length = 124837 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 8804 cttctttctttgactcagctg 8784
>emb|BX537277.15| Zebrafish DNA sequence from clone DKEY-45D16 in linkage group 2, complete sequence Length = 263014 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 102024 cttctttctttgactcagctg 102044
>emb|BX276184.16| Zebrafish DNA sequence from clone CH211-236E20 in linkage group 17, complete sequence Length = 161442 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 65824 cttctttctttgactcagctg 65844 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 27501 cttctttctttgactcagctg 27481
>emb|BX890613.22| Zebrafish DNA sequence from clone DKEY-156K2 in linkage group 14, complete sequence Length = 209228 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 105825 cttctttctttgactcagctg 105845
>emb|BX957251.3| Zebrafish DNA sequence from clone CH211-152L15 in linkage group 23, complete sequence Length = 120410 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 112378 cttctttctttgactcagctg 112398
>emb|BX323594.6| Zebrafish DNA sequence from clone CH211-233H3 in linkage group 8, complete sequence Length = 23416 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 3719 cttctttctttgactcagctg 3699
>emb|BX537137.13| Zebrafish DNA sequence from clone DKEYP-87D1 in linkage group 20 Contains two novel genes and two CpG islands, complete sequence Length = 200339 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 108879 cttctttctttgactcagctg 108859
>emb|BX927404.7| Zebrafish DNA sequence from clone DKEY-18F7 in linkage group 19, complete sequence Length = 94279 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 52498 cttctttctttgactcagctg 52478
>emb|BX511182.12| Zebrafish DNA sequence from clone DKEY-26H11 in linkage group 17, complete sequence Length = 155243 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 137989 cttctttctttgactcagctg 138009 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 29769 cttctttctttgactcagctg 29789
>emb|BX000701.25| Zebrafish DNA sequence from clone CH211-18I3 in linkage group 3, complete sequence Length = 181568 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 59605 cttctttctttgactcagctg 59625
>emb|BX469910.10| Zebrafish DNA sequence from clone CH211-64I20 in linkage group 8, complete sequence Length = 198019 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 109055 cttctttctttgactcagctg 109035
>gb|AC092041.2| Homo sapiens chromosome 3 clone RP11-132K4, complete sequence Length = 171461 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 ggggcagcagcacctccagca 296 ||||||||||||||||||||| Sbjct: 39686 ggggcagcagcacctccagca 39666
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 cagcagcacctccagcagagg 300 ||||||||||||||||||||| Sbjct: 966025 cagcagcacctccagcagagg 966045 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 |||||||||| || |||||||||||| |||||| Sbjct: 9020 tagtcgaacaaaccgaagcccatgtcgtcgtcg 8988
>gb|AC157594.4| Mus musculus BAC clone RP23-279A2 from chromosome 17, complete sequence Length = 220526 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 tctcttctttctttgactcag 270 ||||||||||||||||||||| Sbjct: 184401 tctcttctttctttgactcag 184381
>emb|BX537290.9| Zebrafish DNA sequence from clone DKEY-89K1 in linkage group 5, complete sequence Length = 180630 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 33589 cttctttctttgactcagctg 33569
>gb|AF367274.1|AF367274 Arabidopsis thaliana At1g72090/F28P5_4 mRNA, complete cds Length = 1977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 ccttctcttctttctttgact 267 ||||||||||||||||||||| Sbjct: 1705 ccttctcttctttctttgact 1685
>ref|NM_059543.4| Caenorhabditis elegans C37A2.7 (C37A2.7) mRNA, complete cds Length = 430 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 |||||||| |||| |||||||||||| |||||| Sbjct: 327 tagtcgaagagaccgaagcccatgtcgtcgtcg 295
>emb|AL116172.1|CNS01CZ8 Botrytis cinerea strain T4 cDNA library Length = 516 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||| |||| ||| |||||||| |||||| ||||||||||||| Sbjct: 378 tcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcc 334
>emb|AL115473.1|CNS01CFT Botrytis cinerea strain T4 cDNA library Length = 554 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||| |||| ||| |||||||| |||||| ||||||||||||| Sbjct: 363 tcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcc 319
>emb|AL115427.1|CNS01CEJ Botrytis cinerea strain T4 cDNA library Length = 420 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||| |||| ||| |||||||| |||||| ||||||||||||| Sbjct: 272 tcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcc 228
>emb|AL115241.1|CNS01C9D Botrytis cinerea strain T4 cDNA library Length = 600 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||| |||| ||| |||||||| |||||| ||||||||||||| Sbjct: 417 tcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcc 373
>emb|AL113803.1|CNS01B5F Botrytis cinerea strain T4 cDNA library Length = 540 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||| |||| ||| |||||||| |||||| ||||||||||||| Sbjct: 377 tcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcc 333
>emb|AL113787.1|CNS01B4Z Botrytis cinerea strain T4 cDNA library Length = 540 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||| |||| ||| |||||||| |||||| ||||||||||||| Sbjct: 354 tcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcc 310
>emb|AL112414.1|CNS01A2U Botrytis cinerea strain T4 cDNA library Length = 516 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||| |||| ||| |||||||| |||||| ||||||||||||| Sbjct: 380 tcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcc 336
>emb|AL111591.1|CNS019FZ Botrytis cinerea strain T4 cDNA library Length = 540 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||| |||| ||| |||||||| |||||| ||||||||||||| Sbjct: 367 tcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcc 323
>emb|AL111709.1|CNS019J9 Botrytis cinerea strain T4 cDNA library Length = 540 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||| |||| ||| |||||||| |||||| ||||||||||||| Sbjct: 376 tcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcc 332
>emb|AL110770.1|CNS018T7 Botrytis cinerea strain T4 cDNA library Length = 420 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||| |||| ||| |||||||| |||||| ||||||||||||| Sbjct: 249 tcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcc 205
>emb|AL110713.1|CNS018RM Botrytis cinerea strain T4 cDNA library Length = 600 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 198 tcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 ||||| |||| ||| |||||||| |||||| ||||||||||||| Sbjct: 420 tcgaaaagaccgaaacccatgtcctcgtcggactcttccttctcc 376
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 252 tcttctttctttgactcagctgcag 276 ||||| ||||||||||||||||||| Sbjct: 31227232 tcttcgttctttgactcagctgcag 31227208
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 cagcagagggagcagcagctg 312 ||||||||||||||||||||| Sbjct: 12411897 cagcagagggagcagcagctg 12411917 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 551 ctgaaggcgcagcggcggcggagg 574 |||||||||| ||||||||||||| Sbjct: 18595660 ctgaaggcgcggcggcggcggagg 18595637
>gb|AC154767.2| Mus musculus BAC clone RP23-105P19 from chromosome 13, complete sequence Length = 189362 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 cagcagagggagcagcagctg 312 ||||||||||||||||||||| Sbjct: 18201 cagcagagggagcagcagctg 18181
>gb|AF280909.1|AF280909 Pongo pygmaeus clone 3804 chromosome Xq genomic sequence Length = 853 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 tcagctgcaggggcagcagca 287 ||||||||||||||||||||| Sbjct: 471 tcagctgcaggggcagcagca 451
>gb|AC069273.4|AC069273 Arabidopsis thaliana chromosome 1 BAC F28P5 genomic sequence, complete sequence Length = 38629 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 ccttctcttctttctttgact 267 ||||||||||||||||||||| Sbjct: 14786 ccttctcttctttctttgact 14806
>gb|AY072285.1| Spodoptera frugiperda 60S acidic ribosomal protein P1 mRNA, complete cds Length = 520 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 |||||||| |||| |||||||||||| |||||| Sbjct: 420 tagtcgaagagaccgaagcccatgtcgtcgtcg 388
>gb|BT002712.1| Arabidopsis thaliana At1g72090/F28P5_4 gene, complete cds Length = 1806 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 ccttctcttctttctttgact 267 ||||||||||||||||||||| Sbjct: 1663 ccttctcttctttctttgact 1643
>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446B05 Length = 149145 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 ctctcttccttctccacgacc 248 ||||||||||||||||||||| Sbjct: 138823 ctctcttccttctccacgacc 138803
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 ctctcttccttctccacgacc 248 ||||||||||||||||||||| Sbjct: 40785 ctctcttccttctccacgacc 40765
>emb|AJ490511.1|BMO490511 Bombyx mori mRNA for acidic ribosomal protein P1 (rpP1 gene) Length = 339 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 ||||| || |||| ||||||||||||||||||| Sbjct: 338 tagtcaaagagaccgaagcccatgtcatcgtcg 306
>emb|BX649328.6| Zebrafish DNA sequence from clone DKEY-72L17 in linkage group 20, complete sequence Length = 224173 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 120251 cttctttctttgactcagctg 120231
>emb|AJ457827.1|BMO457827 Bombyx mori mRNA for ribosomal P0 protein (p0 gene) Length = 1151 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 193 tctagtcgaacagactgaagcccatgtcatcgtcgctctcttcct 237 |||||||||| |||| ||||||||||| || ||||| ||||||| Sbjct: 1025 tctagtcgaagagaccaaagcccatgtcgtcatcgctttcttcct 981
>dbj|AB115749.1| Seriola quinqueradiata BRAF mRNA for serine/threonine protein kinase BRAF, partial cds Length = 2340 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 cagcagagggagcagcagctg 312 ||||||||||||||||||||| Sbjct: 42 cagcagagggagcagcagctg 62
>emb|BX005442.10| Zebrafish DNA sequence from clone DKEY-88J15, complete sequence Length = 200176 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 155069 cttctttctttgactcagctg 155089
>emb|BX088547.12| Zebrafish DNA sequence from clone DKEY-238O14, complete sequence Length = 256446 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 53741 cttctttctttgactcagctg 53761
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 ctctcttccttctccacgacc 248 ||||||||||||||||||||| Sbjct: 78132 ctctcttccttctccacgacc 78152
>dbj|AK122126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132D02, full insert sequence Length = 1708 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 ctctcttccttctccacgacc 248 ||||||||||||||||||||| Sbjct: 204 ctctcttccttctccacgacc 184
>dbj|AK110702.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-170-C03, full insert sequence Length = 1104 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 |||||||| |||| |||||||||||| |||||| Sbjct: 996 tagtcgaaaagaccgaagcccatgtcctcgtcg 964
>ref|NM_210388.1| Eremothecium gossypii AER177Wp (AER177W), mRNA Length = 2376 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 280 cagcagcacctccagcagagg 300 ||||||||||||||||||||| Sbjct: 1411 cagcagcacctccagcagagg 1431
>ref|NM_209871.1| Eremothecium gossypii AEL342Wp (AEL342W), mRNA Length = 318 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 |||||||||| || |||||||||||| |||||| Sbjct: 317 tagtcgaacaaaccgaagcccatgtcgtcgtcg 285
>dbj|AK064779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B04, full insert sequence Length = 1479 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 ctctcttccttctccacgacc 248 ||||||||||||||||||||| Sbjct: 90 ctctcttccttctccacgacc 70
>emb|BX470217.15| Zebrafish DNA sequence from clone CH211-231P4 in linkage group 20, complete sequence Length = 119560 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 25420 cttctttctttgactcagctg 25400
>dbj|AK061976.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A03, full insert sequence Length = 1655 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 ctctcttccttctccacgacc 248 ||||||||||||||||||||| Sbjct: 89 ctctcttccttctccacgacc 69
>gb|AY849714.1| Magnaporthe grisea 60S acidic ribosomal protein-like protein mRNA, complete cds Length = 1436 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 |||||||| |||| |||||||||||| |||||| Sbjct: 1015 tagtcgaagagaccgaagcccatgtcctcgtcg 983
>emb|CT009563.15| Mouse DNA sequence from clone RP23-69I23 on chromosome 14, complete sequence Length = 68081 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 230 ctcttccttctccacgaccttctcttctttctt 262 |||||||| |||| | ||||||||||||||||| Sbjct: 49281 ctcttcctcctcctccaccttctcttctttctt 49313
>gb|AC006059.3|AC006059 Homo sapiens PAC RPCI4-613B23 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 185161 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 ggggcagcagcacctccagca 296 ||||||||||||||||||||| Sbjct: 56235 ggggcagcagcacctccagca 56215
>emb|AL845295.21| Zebrafish DNA sequence from clone DKEY-285E18 in linkage group 4, complete sequence Length = 162785 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 69798 cttctttctttgactcagctg 69818
>gb|AY609630.1| Sus scrofa clone Clu_22066.scr.msk.p1.Contig2, mRNA sequence Length = 1621 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 cagctgcaggggcagcagcac 288 ||||||||||||||||||||| Sbjct: 93 cagctgcaggggcagcagcac 73
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 cagcagagggagcagcagctg 312 ||||||||||||||||||||| Sbjct: 12419237 cagcagagggagcagcagctg 12419257 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 551 ctgaaggcgcagcggcggcggagg 574 |||||||||| ||||||||||||| Sbjct: 18606513 ctgaaggcgcggcggcggcggagg 18606490
>emb|BX005101.8| Zebrafish DNA sequence from clone CH211-139G10 in linkage group 20, complete sequence Length = 160724 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 cttctttctttgactcagctg 273 ||||||||||||||||||||| Sbjct: 113782 cttctttctttgactcagctg 113802
>gb|AC151411.2| Mus musculus BAC clone RP24-363M23 from 17, complete sequence Length = 173264 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 tctcttctttctttgactcag 270 ||||||||||||||||||||| Sbjct: 111627 tctcttctttctttgactcag 111607
>gb|AC121770.3| Mus musculus BAC clone RP23-341M16 from 17, complete sequence Length = 186190 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 tctcttctttctttgactcag 270 ||||||||||||||||||||| Sbjct: 45873 tctcttctttctttgactcag 45893
>gb|U62752.1|ZMU62752 Zea mays acidic ribosomal protein P1a (rpp1a) mRNA, complete cds Length = 573 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 196 agtcgaacagactgaagcccatgtc 220 |||||||||| |||||||||||||| Sbjct: 359 agtcgaacaggctgaagcccatgtc 335
>gb|U40147.1|ZMU40147 Zea mays ribosomal protein L12 mRNA, complete cds Length = 530 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 196 agtcgaacagactgaagcccatgtc 220 |||||||||| |||||||||||||| Sbjct: 394 agtcgaacaggctgaagcccatgtc 370
>emb|Z83263.1|BFZ83263 B.floridae mRNA for AmphiP2 Length = 515 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcg 227 ||||||||||| | |||||||||||| |||||| Sbjct: 393 tagtcgaacagtccgaagcccatgtcgtcgtcg 361
>ref|NM_127390.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT2G18330 mRNA, complete cds Length = 2273 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cagctgcaggggcagcagca 287 |||||||||||||||||||| Sbjct: 1194 cagctgcaggggcagcagca 1213
>gb|DQ235177.1| Solanum tuberosum clone 157H11 acidic ribosomal protein P1a-like mRNA, complete cds Length = 567 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 251 ctcttctttctttgactcagctgcaggggcagcagc 286 |||||| |||||| |||||| |||||||||||||| Sbjct: 349 ctcttccttcttttcctcagcagcaggggcagcagc 314
>gb|AC161363.7| Mus musculus BAC clone RP24-554L15 from chromosome 6, complete sequence Length = 209193 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ttctcttctttctttgactc 268 |||||||||||||||||||| Sbjct: 17197 ttctcttctttctttgactc 17216
>ref|NM_197208.1| Oryza sativa (japonica cultivar-group) putative leaf protein (OSJNBa0078O01.26), mRNA Length = 1542 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 551 ctgaaggcgcagcggcggcggagg 574 |||||||||| ||||||||||||| Sbjct: 141 ctgaaggcgcggcggcggcggagg 118
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 gcgcagcggcggcggagggc 576 |||||||||||||||||||| Sbjct: 2316596 gcgcagcggcggcggagggc 2316577
>gb|AY769269.1| Bombyx mori ribosomal protein P2 (RpP2) mRNA, complete cds Length = 524 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtc 226 ||||| || |||| |||||||||||||||||| Sbjct: 407 tagtcaaagagaccgaagcccatgtcatcgtc 376
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 tcggtgatgtccttgccctt 397 |||||||||||||||||||| Sbjct: 2732492 tcggtgatgtccttgccctt 2732473
>gb|AC124332.9| Mus musculus chromosome 1, clone RP24-497F17, complete sequence Length = 181313 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 ccagcaaccagaggctgaat 76 |||||||||||||||||||| Sbjct: 5753 ccagcaaccagaggctgaat 5734
>ref|XM_368802.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00442.4) partial mRNA Length = 1110 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 acagccacgccaccaccacc 334 |||||||||||||||||||| Sbjct: 947 acagccacgccaccaccacc 928
>ref|XM_417924.1| PREDICTED: Gallus gallus similar to DLNB14 (LOC419787), mRNA Length = 2744 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 555 aggcgcagcggcggcggagggccc 578 |||||| ||||||||||||||||| Sbjct: 1065 aggcgccgcggcggcggagggccc 1088
>gb|BC013575.2| Homo sapiens plasminogen activator, urokinase, mRNA (cDNA clone MGC:9223 IMAGE:3890980), complete cds Length = 2333 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 aggcagcaatgaacttcatc 536 |||||||||||||||||||| Sbjct: 149 aggcagcaatgaacttcatc 168
>ref|XM_957014.1| Neurospora crassa OR74A hypothetical protein (NCU07253.1) partial mRNA Length = 1401 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 tcggtgatgtccttgccctt 397 |||||||||||||||||||| Sbjct: 950 tcggtgatgtccttgccctt 931
>ref|XM_327538.1| Neurospora crassa OR74A hypothetical protein (NCU07253.1) partial mRNA Length = 1401 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 tcggtgatgtccttgccctt 397 |||||||||||||||||||| Sbjct: 950 tcggtgatgtccttgccctt 931
>ref|XM_658508.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5996.2), mRNA Length = 330 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 |||||||| |||| |||||||||||| || ||| ||| ||||||||| Sbjct: 329 tagtcgaagagaccgaagcccatgtcctcatcggactcctccttctcc 282
>gb|AY495648.1| Cochliobolus heterostrophus polyketide synthase (PKS7) gene, complete cds Length = 9467 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 acgccaccaccaccagatgg 340 |||||||||||||||||||| Sbjct: 9100 acgccaccaccaccagatgg 9119
>ref|XM_757109.1| Ustilago maydis 521 hypothetical protein (UM06055.1) partial mRNA Length = 942 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtc 226 |||||||| |||| |||||||||||| ||||| Sbjct: 941 tagtcgaagagaccgaagcccatgtcgtcgtc 910
>ref|XM_748034.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g17610) partial mRNA Length = 915 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 gcagcacctccagcagaggg 301 |||||||||||||||||||| Sbjct: 307 gcagcacctccagcagaggg 326
>ref|XM_566980.1| Cryptococcus neoformans var. neoformans JEC21 PRCDNA35 (CNA06350) partial mRNA Length = 471 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtc 226 |||||||| |||| |||||||||||| ||||| Sbjct: 375 tagtcgaagagaccgaagcccatgtcgtcgtc 344
>ref|XM_571539.1| Cryptococcus neoformans var. neoformans JEC21 ribosomal protein P2 (CNF02150) partial mRNA Length = 663 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtc 226 |||||||| |||| |||||||||||| ||||| Sbjct: 391 tagtcgaagagaccgaagcccatgtcgtcgtc 360
>gb|AC130539.3| Mus musculus BAC clone RP23-455J15 from chromosome 9, complete sequence Length = 179156 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 tgatgtccttgcccttcact 401 |||||||||||||||||||| Sbjct: 10959 tgatgtccttgcccttcact 10940
>gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosome 1, complete sequence Length = 164612 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 280 cagcagcacctccagcagagggagcagcagctgaaacagccacgccaccaccacca 335 |||||||||| ||||||| | ||||||||| | | |||| || |||||||||||| Sbjct: 92166 cagcagcaccaccagcagcagcagcagcagcagcagcagcaacaccaccaccacca 92221
>ref|XM_538699.2| PREDICTED: Canis familiaris similar to topoisomerase I binding, arginine/serine-rich (LOC481577), mRNA Length = 3679 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 cttctcttctttctttgact 267 |||||||||||||||||||| Sbjct: 1605 cttctcttctttctttgact 1586
>ref|XM_800089.1| Trypanosoma cruzi strain CL Brener 60S acidic ribosomal protein P2 (Tc00.1047053505977.26) partial mRNA Length = 339 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtc 226 ||||| ||||||| ||||||||||||||||| Sbjct: 338 tagtcaaacagaccaaagcccatgtcatcgtc 307
>gb|AF548329.1| Branchiostoma belcheri ribosomal protein P1 mRNA, complete cds Length = 546 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 192 atctagtcgaacagactgaagcccatgtcatcgtcgctctcttc 235 |||||||||||||| | ||| |||||||| || || |||||||| Sbjct: 508 atctagtcgaacagtccgaatcccatgtcgtcatcactctcttc 465
>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete sequence Length = 146664 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 551 ctgaaggcgcagcggcggcggagg 574 |||||||||| ||||||||||||| Sbjct: 99471 ctgaaggcgcggcggcggcggagg 99448
>ref|XM_730160.1| Plasmodium chabaudi chabaudi hypothetical protein (PC301604.00.0) partial mRNA Length = 480 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 279 gcagcagcacctccagcagagggagcagcagctgaa 314 ||||||| | |||||||||| | ||||||||||||| Sbjct: 436 gcagcagaagctccagcagaagaagcagcagctgaa 471
>ref|XM_739294.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000291.05.0) partial mRNA Length = 522 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 279 gcagcagcacctccagcagagggagcagcagctgaa 314 ||||||| | |||||||||| | ||||||||||||| Sbjct: 436 gcagcagaagctccagcagaagaagcagcagctgaa 471
>emb|CR633168.2|CNS0ENIU Tetraodon nigroviridis full-length cDNA Length = 520 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 agactgaagcccatgtcatcgtcg 227 ||||| |||||||||||||||||| Sbjct: 467 agactaaagcccatgtcatcgtcg 444
>emb|AL445672.15| Human DNA sequence from clone RP11-66D1 on chromosome 9, complete sequence Length = 113031 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 aaaggtatggttcaccagtaaatc 54 |||||||||| ||||||||||||| Sbjct: 103402 aaaggtatgggtcaccagtaaatc 103425
>ref|NM_002658.2| Homo sapiens plasminogen activator, urokinase (PLAU), mRNA Length = 2360 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 aggcagcaatgaacttcatc 536 |||||||||||||||||||| Sbjct: 175 aggcagcaatgaacttcatc 194
>emb|AL357503.12| Human DNA sequence from clone RP5-899C14 on chromosome 20 Contains the 3' end of the C20orf101 gene, complete sequence Length = 133288 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 gcaaccagaggctgaattac 79 |||||||||||||||||||| Sbjct: 84528 gcaaccagaggctgaattac 84509
>emb|AL359262.9| Human DNA sequence from clone RP11-334O13 on chromosome 13 Contains a high-mobility group pseudogene, complete sequence Length = 162763 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 accttctcttctttctttga 265 |||||||||||||||||||| Sbjct: 60709 accttctcttctttctttga 60690
>emb|BX026590.1|CNS08SOI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA4DF12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 824 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 gcatctagtcgaacagactgaagcccat 217 |||| ||||||||||||| ||||||||| Sbjct: 34 gcatttagtcgaacagaccgaagcccat 61
>gb|AY786077.1| Penicillium brevicompactum 60S acidic ribosomal P1 phosphoprotein Pen b 26 (Pen b 26) mRNA, complete cds Length = 324 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 195 tagtcgaacagactgaagcccatgtcatcgtcgctctcttccttctcc 242 |||||||| |||| |||||||||||| || ||| ||| ||||||||| Sbjct: 323 tagtcgaagagaccgaagcccatgtcctcatcggactcctccttctcc 276
>emb|AL603834.6| Mouse DNA sequence from clone RP23-113D4 on chromosome 11 Contains the Rpa1 gene for replication protein A1, the 5' end of a novel gene and a CpG island, complete sequence Length = 67911 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 cctccagcagagggagcagcagct 311 ||||||||||| |||||||||||| Sbjct: 26420 cctccagcagaaggagcagcagct 26397
>emb|X02760.1|HSPAUKR Human mRNA for urokinase (EC 3.4.99.26) Length = 1340 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 aggcagcaatgaacttcatc 536 |||||||||||||||||||| Sbjct: 97 aggcagcaatgaacttcatc 116
>gb|BT007391.1| Homo sapiens plasminogen activator, urokinase mRNA, complete cds Length = 1296 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 517 aggcagcaatgaacttcatc 536 |||||||||||||||||||| Sbjct: 57 aggcagcaatgaacttcatc 76 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,132,837 Number of Sequences: 3902068 Number of extensions: 7132837 Number of successful extensions: 175003 Number of sequences better than 10.0: 292 Number of HSP's better than 10.0 without gapping: 296 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 173167 Number of HSP's gapped (non-prelim): 1824 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
