>emb|AL358074.22| Human DNA sequence from clone RP11-423C15 on chromosome 9 Contains
the 5' end of the MAPKAP1 gene for mitogen-activated
protein kinase associated protein 1, a novel gene, the 5'
end of the PBX3 gene for pre-B-cell leukemia
transcription factor 3 and three CpG islands, complete
sequence
Length = 109081
Score = 36.2 bits (18), Expect = 9.1
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 22 aacaacttnacaaatgatttg 42
|||||||| ||||||||||||
Sbjct: 2621 aacaacttcacaaatgatttg 2601
>emb|AL356259.11| Human DNA sequence from clone RP11-385E5 on chromosome 13 Contains a
mitochondrial ribosomal protein L3 (MRPL3) (MRL3 RPML3)
pseudogene, a ADP-ribosyltransferase (NAD+; poly
(ADP-ribose) polymerase)-like 1 (ADPRTL1) (PH5P p193 PARPL
VPARP VAULT3 KIAA0177) pseudogene, a cyclin K (CCNK)
pseudogene, a pseudogene similar to ornithine transporter
2 (ORNT2), a KIAA1074 protein pseudogene, three novel
genes and three CpG islands, complete sequence
Length = 141876
Score = 36.2 bits (18), Expect = 9.1
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 31 acaaatgatttgcctgtttgta 52
||||||||||||||||| ||||
Sbjct: 21232 acaaatgatttgcctgtctgta 21253
>emb|CR354540.12| Zebrafish DNA sequence from clone DKEY-235K4 in linkage group 7, complete
sequence
Length = 165122
Score = 36.2 bits (18), Expect = 9.1
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 34 aatgatttgcctgtttgt 51
||||||||||||||||||
Sbjct: 128076 aatgatttgcctgtttgt 128059
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 318,659
Number of Sequences: 3902068
Number of extensions: 318659
Number of successful extensions: 18979
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 18951
Number of HSP's gapped (non-prelim): 28
length of query: 62
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 41
effective length of database: 17,151,101,840
effective search space: 703195175440
effective search space used: 703195175440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)