Clone Name | rbasd3o05 |
---|---|
Clone Library Name | barley_pub |
>SUREJ_STRPU (Q26627) Sperm receptor for egg jelly precursor (suREJ)| Length = 1450 Score = 33.1 bits (74), Expect = 0.76 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -2 Query: 101 KTSICSVILSCSACNICTTSWVISPELAYC 12 KTSIC + SA + C T WV +P YC Sbjct: 185 KTSICKSTTTFSATDGCATGWVHNPATGYC 214
>RB6I2_RAT (Q811U3) RAB6-interacting protein 2 (ERC protein 1) (ERC1)| (CAZ-associated structural protein 2) (CAST2) Length = 948 Score = 30.8 bits (68), Expect = 3.7 Identities = 20/73 (27%), Positives = 35/73 (47%) Frame = +1 Query: 1 LLLIQYASSGEMTQDVVQILHAEQDRITEQIEVLRPNRCLLFRPFDHINLTGFSSTDQLQ 180 + L++ +SS + TQ+ V L E+DR+ +Q++ NR L D+ F S+ Q Sbjct: 874 IALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMA--DNYEDDHFRSSRSNQ 931 Query: 181 LHRHKFPQXDRTD 219 + P D + Sbjct: 932 TNHKPSPDQDEEE 944
>PER2_HUMAN (O15055) Period circadian protein 2| Length = 1255 Score = 30.0 bits (66), Expect = 6.4 Identities = 18/56 (32%), Positives = 23/56 (41%) Frame = +1 Query: 58 LHAEQDRITEQIEVLRPNRCLLFRPFDHINLTGFSSTDQLQLHRHKFPQXDRTDSN 225 LH +TEQI L L +P H +G+ S H H Q +DSN Sbjct: 455 LHPSIQELTEQIHRL------LLQPVPHSGSSGYGSLGSNGSHEHLMSQTSSSDSN 504
>C1QR1_HUMAN (Q9NPY3) Complement component C1q receptor precursor (Complement| component 1, q subcomponent, receptor 1) (C1qR) (C1qRp) (C1qR(p)) (C1q/MBL/SPA receptor) (CD93 antigen) (CDw93) Length = 652 Score = 30.0 bits (66), Expect = 6.4 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 4/28 (14%) Frame = +3 Query: 444 KGACNQVPSA----TPCSQGCTSRGGSF 515 +GAC V +PC+QGCT+ GSF Sbjct: 380 EGACQDVDECALGRSPCAQGCTNTDGSF 407
>SN1L2_MOUSE (Q8CFH6) Serine/threonine-protein kinase SNF1-like kinase 2 (EC| 2.7.11.1) (Salt-inducible kinase 2) Length = 931 Score = 30.0 bits (66), Expect = 6.4 Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 3/94 (3%) Frame = +1 Query: 22 SSGEMTQDVVQILHA---EQDRITEQIEVLRPNRCLLFRPFDHINLTGFSSTDQLQLHRH 192 S GE + V++++H+ +Q + E ++ + ++H F ++L+ HR Sbjct: 292 SIGEFNEQVLRLMHSLGIDQQKTVESLQN---------KSYNHFAAIYFLLVERLKSHRS 342 Query: 193 KFPQXDRTDSNNRTVRLLQ*VTKTTALALNLYTT 294 FP R D R + T A + L T Sbjct: 343 SFPVEQRLDGRQRRPSTIAEQTVAKAQTVGLPVT 376
>SN1L2_PONPY (Q5REX1) Serine/threonine-protein kinase SNF1-like kinase 2 (EC| 2.7.11.1) Length = 925 Score = 29.6 bits (65), Expect = 8.3 Identities = 22/91 (24%), Positives = 38/91 (41%) Frame = +1 Query: 22 SSGEMTQDVVQILHAEQDRITEQIEVLRPNRCLLFRPFDHINLTGFSSTDQLQLHRHKFP 201 S GE + V++++H+ + IE L+ + ++H F ++L+ HR FP Sbjct: 292 SIGEFNEQVLRLMHSLGIDQQKTIESLQN------KSYNHFAAIYFLLVERLKSHRSSFP 345 Query: 202 QXDRTDSNNRTVRLLQ*VTKTTALALNLYTT 294 R D R + T A + L T Sbjct: 346 VEQRLDGRQRRPSAIAEQTVAKAQTVGLPVT 376
>SN1L2_HUMAN (Q9H0K1) Serine/threonine-protein kinase SNF1-like kinase 2 (EC| 2.7.11.1) (Qin-induced kinase) Length = 926 Score = 29.6 bits (65), Expect = 8.3 Identities = 22/91 (24%), Positives = 38/91 (41%) Frame = +1 Query: 22 SSGEMTQDVVQILHAEQDRITEQIEVLRPNRCLLFRPFDHINLTGFSSTDQLQLHRHKFP 201 S GE + V++++H+ + IE L+ + ++H F ++L+ HR FP Sbjct: 292 SIGEFNEQVLRLMHSLGIDQQKTIESLQN------KSYNHFAAIYFLLVERLKSHRSSFP 345 Query: 202 QXDRTDSNNRTVRLLQ*VTKTTALALNLYTT 294 R D R + T A + L T Sbjct: 346 VEQRLDGRQRRPSTIAEQTVAKAQTVGLPVT 376 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,903,235 Number of Sequences: 219361 Number of extensions: 1911427 Number of successful extensions: 5223 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4961 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5216 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)